@prefix adms: . @prefix dc: . @prefix dcmitype: . @prefix dcterms: . @prefix doap: . @prefix foaf: . @prefix kgr: . @prefix rdfs: . @prefix schema1: . @prefix skos: . @prefix xsd: . kgr:1000genomes a schema1:DataSource ; rdfs:label "1000 Genomes Project (IGSR)" ; dcterms:created "2025-09-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The International Genome Sample Resource (IGSR) maintains and shares the open human genetic variation resources built by the 1000 Genomes Project, updates them to current reference assemblies (e.g., GRCh38), and incorporates new data sets and populations. IGSR provides a searchable data portal, bulk download methods, and guidance for proper reuse and citation." ; dcterms:identifier "1000genomes" ; dcterms:license ; dcterms:modified "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:1000genomes.data-portal, kgr:1000genomes.ftp, kgr:1000genomes.globus-docs, kgr:1000genomes.ncbi-mirror, kgr:1000genomes.portal, kgr:aop-db.data ; schema1:name "1000 Genomes Project (IGSR)" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:4dn a schema1:DataSource ; rdfs:label "4D Nucleome Data Portal" ; dcterms:created "2025-06-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The 4D Nucleome (4DN) Network aims to understand the principles underlying nuclear organization in space and time (the 4th dimension). The 4DN Data Portal provides a platform to search, visualize, and download nucleomics data generated by the 4DN Network and other reference datasets." ; dcterms:identifier "4dn" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-06-12T20:16:27+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:4dn.chromatin_tracing, kgr:4dn.hic, kgr:4dn.higlass, kgr:4dn.jupyterhub, kgr:4dn.micrometa, kgr:4dn.microscopy, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "4D Nucleome Data Portal" ; skos:inScheme "biological systems", "biomedical", "genomics", "medical imaging" ; adms:status "Active" ; foaf:homepage . kgr:5srrnadb a schema1:DataSource ; rdfs:label "5SRNAdb" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "5SRNAdb (5S rRNA Database) is a curated repository of unique full-length 5S ribosomal RNA sequences and genes across Bacteria, Archaea, and Eukaryota (cytoplasmic and organellar), providing alignments, secondary structure diagrams, taxonomic browsing, and downloadable custom or global alignments for comparative and structural studies." ; dcterms:identifier "5srrnadb" ; dcterms:isReferencedBy ; dcterms:modified "2025-09-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , ; schema1:hasPart kgr:5srrnadb.downloads.archaea.sequences, kgr:5srrnadb.downloads.archaea.structural, kgr:5srrnadb.downloads.bacteria.sequences, kgr:5srrnadb.downloads.bacteria.structural, kgr:5srrnadb.downloads.eukaryota.sequences, kgr:5srrnadb.downloads.eukaryota.structural, kgr:5srrnadb.downloads.mitochondria.sequences, kgr:5srrnadb.downloads.mitochondria.structural, kgr:5srrnadb.downloads.plastids.sequences, kgr:5srrnadb.downloads.plastids.structural, kgr:5srrnadb.portal, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "5SRNAdb" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:aact a schema1:Aggregator ; rdfs:label "Aggregate Analysis of ClinicalTrials.gov (AACT) Database" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "AACT is a publicly available relational PostgreSQL database that contains all protocol and result data elements from every study registered in ClinicalTrials.gov, refreshed daily from the ClinicalTrials.gov registry." ; dcterms:identifier "aact" ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:aact.database, kgr:aact.dictionary, kgr:aact.downloads, kgr:aact.playground, kgr:aact.schema ; schema1:identifier "aact" ; schema1:name "Aggregate Analysis of ClinicalTrials.gov (AACT) Database" ; doap:repository ; skos:altLabel "AACT", "Aggregate Analysis of ClinicalTrial.gov" ; skos:inScheme "clinical", "public health", "translational" ; adms:status "Active" ; foaf:homepage . kgr:aao a schema1:Ontology ; rdfs:label "Amphibian gross anatomy" ; dcterms:description "Description unavailable." ; dcterms:identifier "aao" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Amphibian gross anatomy" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:achilles a schema1:DataSource ; rdfs:label "Project Achilles" ; dcterms:created "2025-07-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Project Achilles is a systematic effort aimed at identifying and cataloging gene essentiality across hundreds of genomically characterized cancer cell lines. Achilles uses genome-scale RNAi and CRISPR-Cas9 genetic perturbation reagents to silence or knockout individual genes and identify those genes that affect cell survival." ; dcterms:identifier "achilles" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings ; schema1:name "Project Achilles" ; skos:inScheme "biomedical", "genomics", "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:broad . kgr:ado a schema1:Ontology ; rdfs:label "Alzheimer's Disease Ontology" ; dcterms:description "Alzheimer's Disease Ontology is a knowledge-based ontology that encompasses varieties of concepts related to Alzheimer'S Disease, structured by upper level Basic Formal Ontology(BFO). This Ontology is enriched by the interrelated entities that demonstrate the network of the understanding on Alzheimer's disease and can be readily applied for text mining." ; dcterms:identifier "ado" ; dcterms:license ; schema1:hasPart kgr:ado.owl ; schema1:name "Alzheimer's Disease Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:adw a schema1:Ontology ; rdfs:label "Animal natural history and life history" ; dcterms:description "Description unavailable." ; dcterms:identifier "adw" ; dcterms:license "Not specified" ; schema1:name "Animal natural history and life history" ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:aeo a schema1:Ontology ; rdfs:label "Anatomical Entity Ontology" ; dcterms:description "AEO is an ontology of anatomical structures that expands CARO, the Common Anatomy Reference Ontology" ; dcterms:identifier "aeo" ; dcterms:license ; schema1:hasPart kgr:aeo.owl ; schema1:name "Anatomical Entity Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:aeolus a schema1:DataSource ; rdfs:label "Adverse Event Open Learning through Universal Standardization (AEOLUS)" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "AEOLUS (Adverse Event Open Learning through Universal Standardization) is a curated and standardized version of the FDA Adverse Event Reporting System (FAERS) that removes duplicate case records and applies standardized vocabularies, with drug names mapped to RxNorm concepts and outcomes mapped to SNOMED-CT concepts, providing pre-computed summary statistics about drug-outcome relationships." ; dcterms:identifier "aeolus" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:aeolus.standardized_data ; schema1:identifier "aeolus" ; schema1:name "Adverse Event Open Learning through Universal Standardization (AEOLUS)" ; skos:altLabel "AEOLUS" ; skos:inScheme "biomedical", "clinical", "drug discovery", "health", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:aero a schema1:Ontology ; rdfs:label "Adverse Event Reporting Ontology" ; dcterms:description "The Adverse Event Reporting Ontology (AERO) is an ontology aimed at supporting clinicians at the time of data entry, increasing quality and accuracy of reported adverse events" ; dcterms:identifier "aero" ; dcterms:license ; schema1:hasPart kgr:aero.owl ; schema1:name "Adverse Event Reporting Ontology" ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:afpo a schema1:Ontology ; rdfs:label "African Population Ontology" ; dcterms:description "AfPO is an ontology that can be used in the study of diverse populations across Africa. It brings together publicly available demographic, anthropological and genetic data relating to African people in a standardised and structured format. The AfPO can be employed to classify African study participants comprehensively in prospective research studies. It can also be used to classify past study participants by mapping them using a language or ethnicity identifier or synonyms." ; dcterms:identifier "afpo" ; dcterms:license ; schema1:hasPart kgr:afpo.json, kgr:afpo.obo, kgr:afpo.owl ; schema1:name "African Population Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:agro a schema1:Ontology ; rdfs:label "Agronomy Ontology" ; dcterms:description "Ontology of agronomic practices, agronomic techniques, and agronomic variables used in agronomic experiments" ; dcterms:identifier "agro" ; dcterms:license ; schema1:hasPart kgr:agro.owl ; schema1:name "Agronomy Ontology" ; doap:repository ; skos:inScheme "agriculture" ; adms:status "Active" ; foaf:homepage . kgr:aism a schema1:Ontology ; rdfs:label "Ontology for the Anatomy of the Insect SkeletoMuscular system (AISM)" ; dcterms:description "The AISM contains terms used in insect biodiversity research for describing structures of the exoskeleton and the skeletomuscular system. It aims to serve as the basic backbone of generalized terms to be expanded with order-specific terminology." ; dcterms:identifier "aism" ; dcterms:license ; schema1:hasPart kgr:aism.json, kgr:aism.obo, kgr:aism.owl ; schema1:name "Ontology for the Anatomy of the Insect SkeletoMuscular system (AISM)" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:alliance a schema1:Aggregator ; rdfs:label "Alliance of Genome Resources" ; dcterms:created "2025-08-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Alliance of Genome Resources (Alliance) is a collaborative platform integrating model organism knowledge (FlyBase, MGD, RGD, SGD, WormBase, Xenbase, ZFIN) and Gene Ontology Consortium annotations to provide harmonized comparative genomics, gene function, phenotype, disease association, expression, orthology, and variant data for cross-species research and translation." ; dcterms:identifier "alliance" ; dcterms:license ; dcterms:modified "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:alliance.api, kgr:alliance.downloads, kgr:alliance.jbrowse2, kgr:alliance.mine, kgr:alliance.openapi, kgr:alliance.portal, kgr:alliance.textpresso, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:translator.alliance.graph ; schema1:name "Alliance of Genome Resources" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage . kgr:alzkb a schema1:KnowledgeGraph ; rdfs:label "Alzheimer's Knowledge Base" ; dcterms:created "2025-06-24T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge base for AI research in Alzheimer Disease, based on graph databases." ; dcterms:identifier "alzkb" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data ; schema1:name "Alzheimer's Knowledge Base" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "genomics", "health", "neuroscience" ; adms:status "Active" ; foaf:homepage . kgr:amphx a schema1:Ontology ; rdfs:label "The Amphioxus Development and Anatomy Ontology" ; dcterms:description "An ontology for the development and anatomy of Amphioxus (Branchiostoma lanceolatum)." ; dcterms:identifier "amphx" ; dcterms:license ; schema1:hasPart kgr:amphx.obo, kgr:amphx.owl ; schema1:name "The Amphioxus Development and Anatomy Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:amyco a schema1:DataSource ; rdfs:label "The Amyloidoses Collection (AmyCo) Database" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Amyloidoses Collection (AmyCo) database contains manually curated data from biomedical literature on amyloidoses and other diseases related to amyloid deposition. It classifies 75 diseases and provides disease-gene associations. The resource is no longer independently accessible but is integrated into the DISEASES database." ; dcterms:identifier "amyco" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:amyco.annotations ; schema1:identifier "amyco" ; schema1:name "The Amyloidoses Collection (AmyCo) Database" ; skos:altLabel "AmyCo" ; skos:inScheme "biomedical", "clinical", "health" ; adms:status "Orphaned" ; foaf:homepage . kgr:aop-db a schema1:Aggregator ; rdfs:label "AOP-DB" ; dcterms:created "2025-06-24T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Adverse Outcome Pathway Database (AOP-DB) is an EPA-developed integrative knowledgebase that connects chemicals and stressors to molecular initiating events, key events across biological organization levels, and adverse outcomes relevant to human health and ecological risk assessment. It harmonizes data from toxicology, high‑throughput screening, pathway, gene/protein, and phenotype resources to enable computational toxicology, mode-of-action analysis, and predictive risk prioritization." ; dcterms:identifier "aop-db" ; dcterms:license ; dcterms:modified "2025-09-04T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:aop-db.data, kgr:aop-db.manual, kgr:aop-db.portal ; schema1:name "AOP-DB" ; adms:status "Active" ; foaf:homepage . kgr:aop-wiki a schema1:DataSource ; rdfs:label "AOP-Wiki" ; dcterms:created "2025-09-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The AOP-Wiki is the primary collaborative authoring and curation interface for the Adverse Outcome Pathway Knowledge Base (AOP-KB). It enables the community to develop, review, browse, and export Adverse Outcome Pathways (AOPs) linking molecular initiating events through key events to adverse outcomes relevant to human and ecological risk assessment. Structured exports (XML and tabular subsets) support computational toxicology, ontology mapping, and integration into predictive assessment workflows." ; dcterms:identifier "aop-wiki" ; dcterms:license ; dcterms:modified "2025-09-04T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:aop-db.data, kgr:aop-wiki.devhandbook, kgr:aop-wiki.dynamic-aop-xml, kgr:aop-wiki.ke-components, kgr:aop-wiki.ke-overview, kgr:aop-wiki.ker, kgr:aop-wiki.nightly-xml, kgr:aop-wiki.portal, kgr:aop-wiki.quarterly-xml ; schema1:name "AOP-Wiki" ; adms:status "Active" ; foaf:homepage . kgr:apo a schema1:Ontology ; rdfs:label "Ascomycete phenotype ontology" ; dcterms:description "A structured controlled vocabulary for the phenotypes of Ascomycete fungi" ; dcterms:identifier "apo" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:apo.obo, kgr:apo.owl ; schema1:name "Ascomycete phenotype ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:apollo_sv a schema1:Ontology ; rdfs:label "Apollo Structured Vocabulary" ; dcterms:description "An OWL2 ontology of phenomena in infectious disease epidemiology and population biology for use in epidemic simulation." ; dcterms:identifier "apollo_sv" ; dcterms:license ; schema1:hasPart kgr:apollo_sv.owl ; schema1:name "Apollo Structured Vocabulary" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:aragorn a schema1:Aggregator ; rdfs:label "ARAGORN" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ARAGORN (Autonomous Relay Agent for Generation Of Ranked Networks) is an NCATS Translator Autonomous Relay Agent (ARA) that performs query operations by compiling and ranking data from multiple ARAGORN-affiliated knowledge provider services. ARAGORN acts as an intermediary between user queries and underlying knowledge providers, aggregating results, performing inference, and ranking answers based on evidence and confidence scores. It implements the Translator Reasoner API (TRAPI) standard for biomedical question-answering." ; dcterms:identifier "aragorn" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:aragorn.api, kgr:aragorn.ui ; schema1:identifier "aragorn" ; schema1:name "ARAGORN" ; doap:repository ; skos:altLabel "ARAGORN", "Autonomous Relay Agent for Generation Of Ranked Networks" ; skos:inScheme "biomedical", "information technology", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:arax a schema1:Aggregator ; rdfs:label "ARAX Translator Reasoner" ; dcterms:created "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ARAX (Expander Agent) is a graph-based modular reasoning tool for translational biomedicine developed as part of the NCATS Biomedical Data Translator program. It provides a web browser user interface and TRAPI-compliant API for encoding translational biomedical questions and integrating knowledge across multiple sources. ARAX features ARAXi, an intuitive domain-specific language for specifying knowledge graph analysis workflows. The system accesses around 40 Knowledge Providers covering over 100 underlying knowledge sources and provides versatile methods for scoring and ranking result subgraphs. ARAX uses RTX-KG2 as its primary knowledge graph and supports query planning, knowledge gathering, overlay of contextual information, filtering, and result ranking through five core modules (Expander, Overlay, Filter, Resultify, and Ranker)." ; dcterms:identifier "arax" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-21T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:arax.api, kgr:arax.araxi.docs, kgr:arax.examples, kgr:arax.github, kgr:arax.ui ; schema1:identifier "arax" ; schema1:name "ARAX Translator Reasoner" ; skos:altLabel "ARAX", "Expander Agent" ; skos:inScheme "biomedical", "health", "precision medicine", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:aro a schema1:Ontology ; rdfs:label "Antibiotic Resistance Ontology" ; dcterms:description "Antibiotic resistance genes and mutations" ; dcterms:identifier "aro" ; dcterms:license ; schema1:hasPart kgr:aro.owl ; schema1:name "Antibiotic Resistance Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ars a schema1:DataSource ; rdfs:label "Autonomous Relay System" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Autonomous Relay System (ARS) is the primary interface and query routing service for the NCATS Biomedical Data Translator, orchestrating queries across multiple knowledge providers and reasoning agents." ; dcterms:identifier "ars" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ars.api, kgr:ars.portal ; schema1:identifier "ars" ; schema1:name "Autonomous Relay System" ; skos:altLabel "ARS", "Translator ARS" ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:atgo a schema1:Ontology ; rdfs:label "Autophagy Ontology" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ATGO (Autophagy Ontology) is a hierarchical functional ontology of autophagy processes built through Active Interaction Mapping of genetic interaction data from Saccharomyces cerevisiae. The second-generation ontology contains 220 functions representing autophagy organization including vesicle transport, cell cycle, and stress response pathways." ; dcterms:identifier "atgo" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:atgo.ontology ; schema1:identifier "atgo" ; schema1:name "Autophagy Ontology" ; skos:altLabel "ATGO" ; skos:inScheme "biological systems", "systems biology" ; adms:status "Inactive" ; foaf:homepage . kgr:athena a schema1:Aggregator ; rdfs:label "Athena" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Athena is the OHDSI (Observational Health Data Sciences and Informatics) standardized vocabulary repository that provides access to standardized terminologies and vocabularies for observational healthcare data. It includes SNOMED CT, RxNorm, LOINC, ICD codes, and many other standard vocabularies, along with mappings between them. Athena enables the transformation of healthcare data into the OMOP Common Data Model format for federated research across multiple healthcare systems." ; dcterms:identifier "athena" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:athena.mappings, kgr:athena.vocabularies, kgr:athena.web ; schema1:identifier "athena" ; schema1:name "Athena" ; skos:altLabel "Athena", "OHDSI Athena" ; skos:inScheme "biomedical", "clinical", "health", "information technology" ; adms:status "Active" ; foaf:homepage . kgr:ato a schema1:Ontology ; rdfs:label "Amphibian taxonomy" ; dcterms:description "Description unavailable." ; dcterms:identifier "ato" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Amphibian taxonomy" ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:automat a schema1:Aggregator ; rdfs:label "Automat" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Translator Knowledge Provider offering multiple sub-graphs in KGX format." ; dcterms:identifier "automat" ; dcterms:license ; dcterms:modified "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:automat.biolink, kgr:automat.ctd, kgr:automat.drugcentral, kgr:automat.gtex, kgr:automat.gtopdb, kgr:automat.gwascatalog, kgr:automat.hetio, kgr:automat.hgnc, kgr:automat.hmdb, kgr:automat.humangoa, kgr:automat.intact, kgr:automat.panther, kgr:automat.pharos, kgr:automat.robokopkg, kgr:automat.robokopplus, kgr:automat.stringdb, kgr:automat.ubergraph ; schema1:name "Automat" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:bacdive a schema1:DataSource ; rdfs:label "BacDive" ; dcterms:created "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BacDive (Bacterial Diversity Metadatabase) is the world's largest database for standardized bacterial information, containing strain-level data on morphology, physiology, growth conditions, and isolation sources for over 99,000 bacterial strains. It integrates research data from diverse sources and provides freely accessible, standardized information with Digital Object Identifiers for each strain." ; dcterms:identifier "bacdive" ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw ; schema1:name "BacDive" ; skos:inScheme "biological systems", "microbiology" ; adms:status "Active" ; foaf:homepage . kgr:bactotraits a schema1:DataSource ; rdfs:label "BactoTraits" ; dcterms:created "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A comprehensive database of bacterial phenotypic traits including morphology, physiology, ecology, and growth characteristics for thousands of bacterial species. BactoTraits provides standardized trait annotations for comparative microbiology and systems biology applications." ; dcterms:identifier "bactotraits" ; dcterms:license ; dcterms:modified "2026-01-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bactotraits.database, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw ; schema1:name "BactoTraits" ; skos:altLabel "Bacterial Traits Database", "BactoTraits" ; skos:inScheme "biological systems", "microbiology", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:univ-lorraine . kgr:batman a schema1:DataSource ; rdfs:label "BATMAN-TCM" ; dcterms:created "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BATMAN-TCM is a web resource for predicting potential targets and molecular mechanisms of traditional Chinese medicine ingredients and formulas." ; dcterms:identifier "batman" ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:batman.web, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:name "BATMAN-TCM" ; skos:altLabel "BATMAN", "BATMAN-TCM" ; skos:inScheme "drug discovery", "pathways", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:bcgo a schema1:Ontology ; rdfs:label "Beta Cell Genomics Ontology" ; dcterms:description "An application ontology built for beta cell genomics studies." ; dcterms:identifier "bcgo" ; dcterms:license ; schema1:hasPart kgr:bcgo.owl ; schema1:name "Beta Cell Genomics Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:bco a schema1:Ontology ; rdfs:label "Biological Collections Ontology" ; dcterms:description "An ontology to support the interoperability of biodiversity data, including data on museum collections, environmental/metagenomic samples, and ecological surveys." ; dcterms:identifier "bco" ; dcterms:license ; schema1:hasPart kgr:bco.owl ; schema1:name "Biological Collections Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:bfo a schema1:Ontology ; rdfs:label "Basic Formal Ontology" ; dcterms:description "The upper level ontology upon which OBO Foundry ontologies are built." ; dcterms:identifier "bfo" ; dcterms:license ; schema1:hasPart kgr:bfo.obo, kgr:bfo.owl, kgr:efo.obo, kgr:efo.owl ; schema1:name "Basic Formal Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:bgee a schema1:DataSource ; rdfs:label "Bgee - Gene Expression Database" ; dcterms:created "2025-05-07T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Bgee is a database for retrieval and comparison of gene expression patterns across multiple animal species, providing information about gene expression in different anatomical structures, developmental stages, and species." ; dcterms:identifier "bgee" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , , , , , , , , , , , , , , , , , , , , , , , ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:bgee.expr_calls, kgr:bgee.rdf, kgr:bgee.site, kgr:bgee.sparql, kgr:genecards.expression.data, kgr:ibkh.graph, kgr:indra.cogex.code, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:spoke.graph, kgr:translator.bgee.graph ; schema1:identifier "bgee" ; schema1:name "Bgee - Gene Expression Database" ; doap:repository ; skos:inScheme "biological systems", "organisms" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:sib . kgr:bigg a schema1:DataSource ; rdfs:label "BiGG Models" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BiGG Models is a knowledgebase of genome-scale metabolic network reconstructions." ; dcterms:identifier "bigg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-27T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:obo-db-ingest.bigg.compartment.json, kgr:obo-db-ingest.bigg.compartment.obo, kgr:obo-db-ingest.bigg.compartment.owl, kgr:obo-db-ingest.bigg.compartment.sssom.tsv, kgr:obo-db-ingest.bigg.metabolite.json, kgr:obo-db-ingest.bigg.metabolite.obo, kgr:obo-db-ingest.bigg.metabolite.owl, kgr:obo-db-ingest.bigg.metabolite.sssom.tsv, kgr:obo-db-ingest.bigg.model.json, kgr:obo-db-ingest.bigg.model.obo, kgr:obo-db-ingest.bigg.model.owl, kgr:obo-db-ingest.bigg.reaction.json, kgr:obo-db-ingest.bigg.reaction.obo, kgr:obo-db-ingest.bigg.reaction.owl, kgr:obo-db-ingest.bigg.reaction.sssom.tsv ; schema1:name "BiGG Models" ; doap:repository ; skos:inScheme "biological systems", "pathways", "simulation", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:bila a schema1:Ontology ; rdfs:label "Bilateria anatomy" ; dcterms:description "Description unavailable." ; dcterms:identifier "bila" ; dcterms:license "Not specified" ; schema1:about ; schema1:hasPart kgr:bila.owl ; schema1:name "Bilateria anatomy" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:bind a schema1:DataSource ; rdfs:label "Biomolecular Interaction Network Database (BIND)" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Biomolecular Interaction Network Database (BIND) was a database designed to store full descriptions of interactions, molecular complexes, and pathways. It is no longer active as a standalone resource but its data has been incorporated into other databases like BOND and iRefIndex." ; dcterms:identifier "bind" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bind.data, kgr:irefindex.database ; schema1:name "Biomolecular Interaction Network Database (BIND)" ; skos:altLabel "BIND" ; skos:inScheme "biomedical", "pathways" ; adms:status "Inactive" ; foaf:homepage . kgr:bindingdb a schema1:DataSource ; rdfs:label "BindingDB" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BindingDB is a public, web-accessible database of measured binding affinities between small, drug-like molecules and protein targets, focusing on the interactions of proteins with small, drug-like molecules. It contains 3.0M data points for 1.3M compounds and 9.6K targets, serving as a crucial resource for drug discovery, pharmacology, and related fields." ; dcterms:identifier "bindingdb" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bindingdb.all_2d, kgr:bindingdb.all_3d, kgr:bindingdb.all_tsv, kgr:bindingdb.api, kgr:bindingdb.articles_2d, kgr:bindingdb.articles_3d, kgr:bindingdb.articles_tsv, kgr:bindingdb.chebi_mapping, kgr:bindingdb.chembl_2d, kgr:bindingdb.chembl_3d, kgr:bindingdb.chembl_tsv, kgr:bindingdb.cid_mapping, kgr:bindingdb.covid19_2d, kgr:bindingdb.covid19_3d, kgr:bindingdb.covid19_tsv, kgr:bindingdb.drugbank_mapping, kgr:bindingdb.patents_2d, kgr:bindingdb.patents_3d, kgr:bindingdb.patents_tsv, kgr:bindingdb.pubchem_2d, kgr:bindingdb.pubchem_3d, kgr:bindingdb.pubchem_tsv, kgr:bindingdb.sid_mapping, kgr:bindingdb.target_sequences, kgr:bindingdb.uniprot_mapping, kgr:spoke.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "bindingdb" ; schema1:name "BindingDB" ; skos:inScheme "biomedical", "chemistry and biochemistry", "drug discovery", "pharmacology" ; skos:notation "FAIRsharing.3b36hk" ; adms:status "Active" ; foaf:homepage . kgr:bio2rdf a schema1:Aggregator ; rdfs:label "Bio2RDF (Linked Biomedical RDF Network)" ; dcterms:created "2025-12-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Bio2RDF (Linked Biomedical RDF Network) is a large-scale open-source semantic web integration project that converts over 35 diverse biological and biomedical databases into standardized RDF (Resource Description Framework) linked data, providing 11 billion RDF triples accessible through SPARQL endpoints and REST APIs. It enables federated queries across heterogeneous data sources using W3C standards and the Semanticscience Integrated Ontology (SIO)." ; dcterms:identifier "bio2rdf" ; dcterms:isReferencedBy , , , , ; dcterms:license ; dcterms:modified "2025-12-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bio2rdf.api, kgr:bio2rdf.biosearch, kgr:bio2rdf.dumps, kgr:bio2rdf.sparql, kgr:bio2rdf.web ; schema1:identifier "bio2rdf" ; schema1:name "Bio2RDF (Linked Biomedical RDF Network)" ; doap:repository ; skos:altLabel "Bio2RDF", "Linked Biomedical RDF Network" ; skos:inScheme "biomedical", "genomics" ; adms:status "Inactive" ; foaf:homepage ; foaf:maker kgr:maastricht-ids . kgr:biobricks-aopwiki a schema1:KnowledgeGraph ; rdfs:label "BioBricks AOP-Wiki" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BioBricks AOP-Wiki is an open knowledge graph for Adverse Outcome Pathways from the AOP-Wiki. It provides structured data about biological pathways linking chemical exposures to adverse health effects." ; dcterms:identifier "biobricks-aopwiki" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biobricks-aopwiki.sparql ; schema1:name "BioBricks AOP-Wiki" ; doap:repository ; skos:inScheme "biological systems", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:biobricks-ice a schema1:KnowledgeGraph ; rdfs:label "BioBricks ICE" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BioBricks ICE (Integrated Chemical Environment) is an open knowledge graph for cheminformatics and chemical safety data from EPA's CompTox database." ; dcterms:identifier "biobricks-ice" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biobricks-ice.sparql ; schema1:name "BioBricks ICE" ; doap:repository ; skos:inScheme "chemistry and biochemistry", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:biobricks-mesh a schema1:KnowledgeGraph ; rdfs:label "BioBricks MeSH" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BioBricks MeSH is an open knowledge graph of Medical Subject Headings (MeSH) biomedical vocabulary, providing structured access to the NLM's controlled vocabulary thesaurus." ; dcterms:identifier "biobricks-mesh" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biobricks-mesh.sparql ; schema1:name "BioBricks MeSH" ; doap:repository ; skos:inScheme "biomedical", "health" ; adms:status "Active" ; foaf:homepage . kgr:biobricks-pubchem-annotations a schema1:KnowledgeGraph ; rdfs:label "BioBricks PubChem Annotations" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BioBricks PubChem Annotations is an open knowledge graph of chemical annotations from PubChem, providing structured access to chemical compound data and annotations." ; dcterms:identifier "biobricks-pubchem-annotations" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biobricks-pubchem-annotations.sparql ; schema1:name "BioBricks PubChem Annotations" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:biobricks-tox21 a schema1:KnowledgeGraph ; rdfs:label "BioBricks Tox21" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BioBricks Tox21 is an open knowledge graph for Tox21 toxicology screening data, providing structured access to high-throughput toxicity testing results." ; dcterms:identifier "biobricks-tox21" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biobricks-tox21.sparql ; schema1:name "BioBricks Tox21" ; doap:repository ; skos:inScheme "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:biobricks-toxcast a schema1:KnowledgeGraph ; rdfs:label "BioBricks ToxCast" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BioBricks ToxCast is an open knowledge graph for EPA ToxCast high-throughput screening data, providing structured access to chemical toxicity testing results." ; dcterms:identifier "biobricks-toxcast" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biobricks-toxcast.sparql ; schema1:name "BioBricks ToxCast" ; doap:repository ; skos:inScheme "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:biocyc a schema1:DataSource ; rdfs:label "BioCyc" ; dcterms:created "2025-03-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BioCyc is a collection of 20,070 Pathway/Genome Databases (PGDBs) for model eukaryotes and for thousands of microbes, plus software tools for exploring them. BioCyc is an encyclopedic reference that contains curated data from 146,000 publications." ; dcterms:identifier "biocyc" ; dcterms:license ; dcterms:modified "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:obo-db-ingest.bigg.metabolite.sssom.tsv, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "BioCyc" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:biogps a schema1:Aggregator ; rdfs:label "BioGPS" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BioGPS is an extensible and customizable gene annotation portal that aggregates gene-centric data (expression profiles, functional annotations, pathways, interactions, ontologies) from numerous external resources using a community-driven plugin system. It enables interactive expression visualization across tissues/cell types and provides programmatic and bulk access to underlying annotation tables." ; dcterms:identifier "biogps" ; dcterms:isReferencedBy ; dcterms:modified "2025-09-10T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biogps.api, kgr:biogps.downloads, kgr:biogps.faq, kgr:biogps.portal, kgr:genecards.expression.data, kgr:pharmkg.graph ; schema1:name "BioGPS" ; skos:inScheme "biological systems", "biomedical", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:biogrid a schema1:DataSource ; rdfs:label "BioGRID" ; dcterms:created "2025-08-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Biological General Repository for Interaction Datasets (BioGRID) is an open, curated database of genetic, protein, and chemical interaction data, post-translational modifications (PTMs), CRISPR screen results (ORCS), and themed curation project datasets spanning model organisms and human, freely available under the MIT License." ; dcterms:identifier "biogrid" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2025-12-22T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , , ; schema1:hasPart kgr:biogrid.api, kgr:biogrid.chemicals, kgr:biogrid.identifiers, kgr:biogrid.interactions.mitab, kgr:biogrid.interactions.tab3, kgr:biogrid.ptm, kgr:biogrid.web, kgr:genecards.protein.interactions, kgr:irefindex.database, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "biogrid" ; schema1:name "BioGRID" ; skos:inScheme "biomedical", "genomics", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:biohealth a schema1:KnowledgeGraph ; rdfs:label "Bio-Health KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Bio-Health KG is a dynamically-updated open knowledge network for health, integrating biomedical insights with social determinants of health." ; dcterms:identifier "biohealth" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biohealth.sparql ; schema1:name "Bio-Health KG" ; skos:inScheme "biomedical", "health", "social determinants" ; adms:status "Active" ; foaf:homepage . kgr:biolink a schema1:DataModel ; rdfs:label "Biolink-Model" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Entity and association taxonomy and datamodel for life-sciences data" ; dcterms:identifier "biolink" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:automat.biolink, kgr:biolink.docs, kgr:biolink.infores.docs, kgr:biolink.model.graphql, kgr:biolink.model.json, kgr:biolink.model.owl, kgr:biolink.model.proto, kgr:biolink.model.shacl, kgr:biolink.model.shex, kgr:cpathkg.code, kgr:mechreponet.kg, kgr:microbiomekg.api ; schema1:name "Biolink-Model" ; doap:repository ; skos:inScheme "upper" ; adms:status "Active" ; foaf:homepage . kgr:biomarker a schema1:KnowledgeGraph ; rdfs:label "BiomarkerKB" ; dcterms:created "2025-05-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BiomarkerKB is a Common Fund Data Ecosystem (CFDE) sponsored project to develop a knowledgebase that organizes and integrates biomarker data from different public sources, providing researchers with comprehensive, integrated access to biomarker information." ; dcterms:identifier "biomarker" ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "BiomarkerKB" ; skos:inScheme "biological systems", "biomedical", "health" ; adms:status "Active" ; foaf:homepage . kgr:biomarkerkg a schema1:KnowledgeGraph ; rdfs:label "Biomarker Knowledge Graph" ; dcterms:created "2025-05-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Biomarker Knowledge Graph (BKG) is a comprehensive resource for biomarker data that integrates multiple biomedical resources to connect biomarkers with anatomical structures, compounds, conditions, roles, and variants." ; dcterms:identifier "biomarkerkg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biomarkerkg.edges.anatomy, kgr:biomarkerkg.edges.compound, kgr:biomarkerkg.edges.condition, kgr:biomarkerkg.edges.role, kgr:biomarkerkg.edges.variant, kgr:biomarkerkg.nodes.anatomy, kgr:biomarkerkg.nodes.biomarker, kgr:biomarkerkg.nodes.compound, kgr:biomarkerkg.nodes.condition, kgr:biomarkerkg.nodes.role, kgr:biomarkerkg.nodes.variant, kgr:biomarkerkg.site ; schema1:name "Biomarker Knowledge Graph" ; doap:repository ; skos:inScheme "biological systems", "health" ; adms:status "Active" ; foaf:homepage . kgr:bioplanet a schema1:DataSource ; rdfs:label "BioPlanet" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The NCATS BioPlanet is a comprehensive, publicly accessible informatics resource that catalogues all pathways, their healthy and disease state annotations, and targets within and relationships among them." ; dcterms:identifier "bioplanet" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bioplanet.data ; schema1:identifier "bioplanet" ; schema1:name "BioPlanet" ; skos:inScheme "pathways", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:bioportal a schema1:Aggregator ; rdfs:label "BioPortal" ; dcterms:created "2025-08-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BioPortal is a comprehensive open repository and portal for biomedical ontologies and terminologies, providing search, browsing, mappings, versioned downloads, REST APIs, widgets, and analytics to support data integration, annotation, and semantic interoperability in the life and health sciences." ; dcterms:identifier "bioportal" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-16T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioportal.api, kgr:bioportal.portal, kgr:pheknowlator.graph ; schema1:identifier "bioportal" ; schema1:name "BioPortal" ; skos:inScheme "biomedical", "clinical", "information technology", "upper" ; adms:status "Active" . kgr:bioteque a schema1:KnowledgeGraph ; rdfs:label "Bioteque" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge graph of biological entities and their associations that integrates and formats biomedical data as pre-calculated knowledge graph embeddings" ; dcterms:identifier "bioteque" ; dcterms:isReferencedBy ; dcterms:modified "2025-09-10T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bioteque.bqsupports, kgr:bioteque.code, kgr:bioteque.embeddings ; schema1:name "Bioteque" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:bmont a schema1:Ontology ; rdfs:label "Biomarker Ontology" ; dcterms:description "An application ontology that represents comprehensive knowledge involving a variety of fields of medical and biological aspects." ; dcterms:identifier "bmont" ; dcterms:license ; schema1:hasPart kgr:bmont.BMONT.owl ; schema1:name "Biomarker Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:bootstrep a schema1:Ontology ; rdfs:label "Gene Regulation Ontology" ; dcterms:description "Description unavailable." ; dcterms:identifier "bootstrep" ; dcterms:license "Not specified" ; schema1:name "Gene Regulation Ontology" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:brenda a schema1:DataSource ; rdfs:label "BRENDA" ; dcterms:created "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "BRENDA (BRaunschweig ENzyme DAtabase) is the main collection of enzyme functional data available to the scientific community. It provides comprehensive information on enzyme nomenclature, reaction mechanisms, specificity, functional parameters, and enzyme-related disease information. BRENDA integrates biochemical and molecular information from primary literature, patents, and data collections to support enzyme research and applications in biotechnology, medicine, and metabolic engineering. The database is curated at the Leibniz Institute DSMZ and is part of ELIXIR Core Data Resources and the German Network for Bioinformatics Infrastructure (de.NBI)." ; dcterms:identifier "brenda" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:brenda.json, kgr:brenda.soap, kgr:brenda.sparql, kgr:brenda.textfile, kgr:brenda.web, kgr:ibkh.graph ; schema1:name "BRENDA" ; skos:inScheme "biomedical", "chemistry and biochemistry", "pathways" ; adms:status "Active" ; foaf:homepage . kgr:bspo a schema1:Ontology ; rdfs:label "Biological Spatial Ontology" ; dcterms:description "An ontology for representing spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces" ; dcterms:identifier "bspo" ; dcterms:license ; schema1:hasPart kgr:bspo.obo, kgr:bspo.owl ; schema1:name "Biological Spatial Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:bto a schema1:Ontology ; rdfs:label "BRENDA tissue / enzyme source" ; dcterms:description "A structured controlled vocabulary for the source of an enzyme comprising tissues, cell lines, cell types and cell cultures." ; dcterms:identifier "bto" ; dcterms:license ; schema1:hasPart kgr:bioteque.embeddings, kgr:bto.json, kgr:bto.obo, kgr:bto.owl, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:efo.obo, kgr:efo.owl ; schema1:name "BRENDA tissue / enzyme source" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:bv-brc a schema1:DataSource ; rdfs:label "Bacterial and Viral Bioinformatics Resource Center" ; dcterms:created "2025-05-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Bacterial and Viral Bioinformatics Resource Center (BV-BRC) is a comprehensive resource for bacterial and viral infectious disease research that combines the data, technology, and extensive user communities from two long-running centers - PATRIC (the bacterial system) and IRD/ViPR (the viral systems). BV-BRC provides integrated data, advanced bioinformatics tools, and workflows to support the scientific community in understanding and combating infectious diseases." ; dcterms:identifier "bv-brc" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:bv-brc.api, kgr:bv-brc.cli, kgr:bv-brc.ftp, kgr:bv-brc.site, kgr:spoke.graph ; schema1:name "Bacterial and Viral Bioinformatics Resource Center" ; doap:repository ; skos:inScheme "biomedical", "genomics", "health", "microbiology" ; adms:status "Active" ; foaf:homepage . kgr:cacao a schema1:DataSource ; rdfs:label "Community Assessment of Community Annotation with Ontologies" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CACAO (Community Assessment of Community Annotation with Ontologies) was a collaborative annotation project where undergraduate students used the Gene Ontology to annotate proteins based on evidence from scientific papers. The project appears to be inactive as the website is no longer accessible." ; dcterms:identifier "cacao" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cacao.api, kgr:cacao.gowiki ; schema1:identifier "cacao" ; schema1:name "Community Assessment of Community Annotation with Ontologies" ; skos:altLabel "CACAO" ; skos:inScheme "genomics" ; adms:status "Inactive" ; foaf:homepage . kgr:cam-kp a schema1:KnowledgeGraph ; rdfs:label "CAM-KP (Causal Activity Models Knowledge Provider)" ; dcterms:created "2025-12-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CAM-KP (Causal Activity Models Knowledge Provider) is a web service knowledge graph that integrates causal biological and chemical models from Gene Ontology, Reactome, and Comparative Toxicogenomics Database (CTD) into a unified, semantically rich platform. It provides access to structured biomedical knowledge through SPARQL and TRAPI-compliant REST APIs, supporting hypothesis generation, drug discovery, and environmental health research." ; dcterms:identifier "cam-kp" ; dcterms:isReferencedBy , , , ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cam-kp.api, kgr:cam-kp.automat, kgr:cam-kp.ctd-interactions, kgr:cam-kp.documentation, kgr:cam-kp.go-cams, kgr:cam-kp.reactome-cams, kgr:cam-kp.sparql ; schema1:identifier "cam-kp" ; schema1:name "CAM-KP (Causal Activity Models Knowledge Provider)" ; doap:repository ; skos:inScheme "health", "pathways" ; adms:status "Inactive" ; foaf:homepage ; foaf:maker kgr:renci . kgr:cancer-genome-interpreter a schema1:DataSource ; rdfs:label "Cancer Genome Interpreter" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Cancer Genome Interpreter (CGI) is a resource that annotates tumor genomic alterations to identify likely oncogenic events and interpret their potential therapeutic, prognostic, and diagnostic relevance using curated knowledge bases, machine learning (BoostDM, OncodriveMUT), and clinical evidence levels." ; dcterms:identifier "cancer-genome-interpreter" ; dcterms:license ; dcterms:modified "2025-09-16T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cancer-genome-interpreter.api, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:cancer-genome-interpreter.portal, kgr:clinicalkg.graph ; schema1:name "Cancer Genome Interpreter" ; skos:inScheme "biomedical", "clinical", "drug discovery", "precision medicine" ; adms:status "Active" . kgr:cancer-registry-kg a schema1:KnowledgeGraph ; rdfs:label "Cancer Registry Knowledge Graph" ; dcterms:created "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A semantic web-based knowledge graph integrating cancer registry data from multiple U.S. state registries with external datasets to enable advanced analytics, complex queries, hypothesis generation, and visualization for cancer surveillance and research" ; dcterms:identifier "cancer-registry-kg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cancer-registry-kg.api, kgr:cancer-registry-kg.cdi, kgr:cancer-registry-kg.kcr, kgr:cancer-registry-kg.ltr, kgr:cancer-registry-kg.visualization ; schema1:name "Cancer Registry Knowledge Graph" ; skos:inScheme "biomedical", "clinical", "health", "translational" ; adms:status "Active" ; foaf:homepage . kgr:caro a schema1:Ontology ; rdfs:label "Common Anatomy Reference Ontology" ; dcterms:description "An upper level ontology to facilitate interoperability between existing anatomy ontologies for different species" ; dcterms:identifier "caro" ; dcterms:license ; schema1:hasPart kgr:caro.owl ; schema1:name "Common Anatomy Reference Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:catalogue-of-life a schema1:KnowledgeGraph ; rdfs:label "Catalogue of Life" ; dcterms:created "2025-12-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Catalogue of Life is the most comprehensive global taxonomic resource providing an authoritative checklist of all known species on Earth. It aggregates 2.2+ million living species and 153,000 extinct species from 165 peer-reviewed taxonomic databases representing 500+ expert taxonomists. It serves as the foundational taxonomic backbone for biodiversity research, conservation policy, and species identification worldwide, with both static annual releases and dynamic monthly updates." ; dcterms:identifier "catalogue-of-life" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:catalogue-of-life.annual-releases, kgr:catalogue-of-life.api, kgr:catalogue-of-life.checklistbank, kgr:catalogue-of-life.documentation, kgr:catalogue-of-life.downloads, kgr:catalogue-of-life.web ; schema1:identifier "catalogue-of-life" ; schema1:name "Catalogue of Life" ; doap:repository ; skos:altLabel "Catalogue of Life", "Catalogue of Life Checklist", "CoL", "Species 2000/ITIS" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:gbif, kgr:inhs, kgr:naturalis . kgr:ccle a schema1:DataSource ; rdfs:label "CCLE" ; dcterms:created "2025-03-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CCLE is the Cancer Cell Line Encyclopedia, a collaboration between the Broad Institute and the Novartis Institutes for Biomedical Research." ; dcterms:identifier "ccle" ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:indra.cogex.code, kgr:obo-db-ingest.ccle.json, kgr:obo-db-ingest.ccle.obo, kgr:obo-db-ingest.ccle.owl, kgr:obo-db-ingest.ccle.sssom.tsv ; schema1:name "CCLE" ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:cdao a schema1:Ontology ; rdfs:label "Comparative Data Analysis Ontology" ; dcterms:description "a formalization of concepts and relations relevant to evolutionary comparative analysis" ; dcterms:identifier "cdao" ; dcterms:license ; schema1:hasPart kgr:cdao.owl ; schema1:name "Comparative Data Analysis Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:cdiscvocab a schema1:Aggregator ; rdfs:label "CDISC Controlled Terminology" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CDISC Controlled Terminology provides standardized codelists and valid values for clinical research data collection, tabulation, analysis, and submission to regulatory agencies including FDA and PMDA. Maintained as part of NCI Thesaurus and distributed by NCI EVS in multiple formats." ; dcterms:identifier "cdiscvocab" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:athena.mappings, kgr:cdiscvocab.adam, kgr:cdiscvocab.browser, kgr:cdiscvocab.cdash, kgr:cdiscvocab.ddf, kgr:cdiscvocab.definexml, kgr:cdiscvocab.glossary, kgr:cdiscvocab.mrct, kgr:cdiscvocab.protocol, kgr:cdiscvocab.sdtm, kgr:cdiscvocab.send, kgr:cdiscvocab.tmf ; schema1:name "CDISC Controlled Terminology" ; skos:altLabel "CDISC CT", "CDISC Controlled Terminology" ; skos:inScheme "biomedical", "clinical", "health", "information technology" ; adms:status "Active" ; foaf:homepage . kgr:cdno a schema1:Ontology ; rdfs:label "Compositional Dietary Nutrition Ontology" ; dcterms:description "CDNO provides structured terminologies to describe nutritional attributes of material entities that contribute to human diet." ; dcterms:identifier "cdno" ; dcterms:license ; schema1:hasPart kgr:cdno.obo, kgr:cdno.owl ; schema1:name "Compositional Dietary Nutrition Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:cebs a schema1:DataSource ; rdfs:label "CEBS" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Chemical Effects in Biological Systems (CEBS) is a public, web-accessible, manually curated repository of toxicology study data from the National Toxicology Program (NTP) and other research programs. CEBS contains individual-level and summarized study data from carcinogenicity studies, short-term toxicity studies, genetic toxicity assays, and other toxicological investigations. The database integrates chemical structure information, study designs, experimental conditions, and biological effects to support toxicology research and risk assessment." ; dcterms:identifier "cebs" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cebs.api, kgr:cebs.data, kgr:cebs.web ; schema1:identifier "cebs" ; schema1:name "CEBS" ; skos:altLabel "CEBS", "Chemical Effects in Biological Systems" ; skos:inScheme "biomedical", "health", "public health", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:cellmarker a schema1:DataSource ; rdfs:label "CellMarker" ; dcterms:created "2025-07-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CellMarker is a comprehensive and accurate resource of cell markers for various cell types in tissues of human and mouse. By manually curating over 100,000 published papers, the database contains 13,605 cell markers of 467 cell types in 158 human tissues/sub-tissues and 9,148 cell makers of 389 cell types in 81 mouse tissues/sub-tissues." ; dcterms:identifier "cellmarker" ; dcterms:isReferencedBy ; dcterms:modified "2025-07-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:cellmarker.act, kgr:cellmarker.all, kgr:cellmarker.human, kgr:cellmarker.mouse, kgr:cellmarker.singlecell, kgr:indra.cogex.code ; schema1:identifier "cellmarker" ; schema1:name "CellMarker" ; skos:inScheme "biological systems", "biomedical", "genomics", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:cellosaurus a schema1:DataSource ; rdfs:label "Cellosaurus" ; dcterms:created "2025-05-07T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Cellosaurus is a knowledge resource on cell lines providing information on cell lines from vertebrates, invertebrates, and plants, including standardized nomenclature, cross-references to other databases, and information on problematic cell lines." ; dcterms:identifier "cellosaurus" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:cellosaurus.api.rest, kgr:cellosaurus.api.sparql, kgr:cellosaurus.clastr, kgr:cellosaurus.rdf, kgr:cellosaurus.site, kgr:cellosaurus.txt, kgr:cellosaurus.xml, kgr:cellosaurus.xrefs ; schema1:name "Cellosaurus" ; doap:repository ; skos:inScheme "biological systems", "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:sib . kgr:ceph a schema1:Ontology ; rdfs:label "Cephalopod Ontology" ; dcterms:description "An anatomical and developmental ontology for cephalopods" ; dcterms:identifier "ceph" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:ceph.obo, kgr:ceph.owl ; schema1:name "Cephalopod Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:cfde-ddkg a schema1:KnowledgeGraph ; rdfs:label "Data Distillery Knowledge Graph (DDKG)" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Common Fund Data Ecosystem (CFDE) aims to facilitate better integration, and reuse of Common Fund data to accelerate discoveries in biomedical research.The Data Distillery project aims to integrate summarized (“distilled”) Common Fund data within a knowledge graph. The purpose of the Data Distillery Knowledge Graph (DDKG) is to link multiple sources of expertly curated data, thus providing data integration across multiple Common Fund data coordinating centers (DCCs)." ; dcterms:identifier "cfde-ddkg" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cfde-ddkg.downloads, kgr:cfde-ddkg.portal ; schema1:name "Data Distillery Knowledge Graph (DDKG)" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:cfde-gse a schema1:KnowledgeGraph ; rdfs:label "Common Fund Data Ecosystem Gene Set Enrichment (CFDE-GSE)" ; dcterms:created "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Common Fund Data Ecosystem Gene Set Enrichment (CFDE-GSE) is a knowledge graph that integrates gene set collections from multiple Common Fund programs to enable cross-program gene set enrichment analysis, functional annotation, and systems-level understanding of biological processes across diverse biomedical research domains." ; dcterms:identifier "cfde-gse" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cfde-gse.api, kgr:cfde-gse.genesets, kgr:cfde-gse.graph, kgr:cfde-gse.portal ; schema1:name "Common Fund Data Ecosystem Gene Set Enrichment (CFDE-GSE)" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "genomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:cgnc a schema1:DataSource ; rdfs:label "CGNC" ; dcterms:created "2025-03-24T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CGNC is the Chicken Gene Nomenclature Consortium. It is an international group of researchers interested in providing standardized gene nomenclature for chicken genes." ; dcterms:identifier "cgnc" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cgnc.genes, kgr:obo-db-ingest.cgnc.json, kgr:obo-db-ingest.cgnc.obo, kgr:obo-db-ingest.cgnc.owl, kgr:obo-db-ingest.cgnc.sssom.tsv ; schema1:name "CGNC" ; skos:inScheme "organisms" ; adms:status "Active" ; foaf:homepage . kgr:chea-kg a schema1:KnowledgeGraph ; rdfs:label "ChEA-KG" ; dcterms:created "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ChEA-KG is a knowledge graph built around the ChEA (ChIP Enrichment Analysis) database that integrates chromatin immunoprecipitation sequencing data with transcription factor binding sites, gene regulatory networks, and functional annotations to provide comprehensive insights into transcriptional regulation across cell types and conditions." ; dcterms:identifier "chea-kg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:chea-kg.api, kgr:chea-kg.chipseq, kgr:chea-kg.graph, kgr:chea-kg.portal ; schema1:name "ChEA-KG" ; doap:repository ; skos:inScheme "biomedical", "genomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:chebi a schema1:Ontology ; rdfs:label "Chemical Entities of Biological Interest" ; dcterms:description "A structured classification of molecular entities of biological interest focusing on 'small' chemical compounds." ; dcterms:identifier "chebi" ; dcterms:license ; schema1:hasPart kgr:bioteque.embeddings, kgr:chebi.chebi_core.obo, kgr:chebi.chebi_lite.obo, kgr:chebi.json, kgr:chebi.obo, kgr:chebi.owl, kgr:chebi.owl.gz, kgr:drug-approvals-kp.graph.edges, kgr:drug-approvals-kp.graph.nodes, kgr:drugmechdb.graph, kgr:efo.obo, kgr:efo.owl, kgr:forum.graph.dump, kgr:ibkh.graph, kgr:icees-kg.graph, kgr:icees-kg.metadata, kgr:icees-kg.trapi, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:mechreponet.kg, kgr:microbiomekg.api, kgr:obo-db-ingest.bigg.metabolite.sssom.tsv, kgr:pheknowlator.graph, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:ubkg.csv, kgr:ubkg.neo4j, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:name "Chemical Entities of Biological Interest" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:chembl a schema1:DataSource ; rdfs:label "ChEMBL" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ChEMBL is a manually curated database of bioactive molecules with drug-like properties. It brings together chemical, bioactivity and genomic data to aid the translation of genomic information into effective new drugs." ; dcterms:identifier "chembl" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:chembl.api, kgr:chembl.map_to_uniprot, kgr:chembl.mysql, kgr:chembl.postgres, kgr:chembl.rdf, kgr:chembl.sdf, kgr:chembl.site, kgr:chembl.sparql, kgr:chembl.sqlite, kgr:ibkh.graph, kgr:icees-kg.graph, kgr:icees-kg.metadata, kgr:icees-kg.trapi, kgr:indra.cogex.code, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:spoke.graph, kgr:translator.chembl.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "chembl" ; schema1:name "ChEMBL" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:chemicalchecker a schema1:DataSource ; rdfs:label "Chemical Checker" ; dcterms:created "2025-07-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Chemical Checker (CC) is a data-driven resource of small molecule bioactivity data, organized into five levels of increasing complexity, ranging from chemical properties to clinical outcomes. It is designed to support computational drug discovery tasks." ; dcterms:identifier "chemicalchecker" ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:chemicalchecker.api, kgr:chemicalchecker.signatures, kgr:chemicalchecker.signaturizer ; schema1:name "Chemical Checker" ; doap:repository ; skos:inScheme "drug discovery" ; adms:status "Active" ; foaf:homepage . kgr:cheminf a schema1:Ontology ; rdfs:label "Chemical Information Ontology" ; dcterms:description "Includes terms for the descriptors commonly used in cheminformatics software applications and the algorithms which generate them." ; dcterms:identifier "cheminf" ; dcterms:license ; schema1:hasPart kgr:cheminf.owl, kgr:forum.graph.dump ; schema1:name "Chemical Information Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:chemont a schema1:Ontology ; rdfs:label "ChemOnt" ; dcterms:created "2025-12-11T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ChemOnt (Chemical Ontology) is a comprehensive chemical ontology that provides a hierarchical classification of chemical entities. It is designed to support chemical informatics applications and enable semantic integration of chemical data across biomedical systems. ChemOnt is developed and maintained by the Wishart Lab and integrates chemical structures with ontological classifications." ; dcterms:identifier "chemont" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:chemont.classyfire, kgr:chemont.obo, kgr:forum.graph.dump ; schema1:name "ChemOnt" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:chiro a schema1:Ontology ; rdfs:label "CHEBI Integrated Role Ontology" ; dcterms:description "CHEBI provides a distinct role hierarchy. Chemicals in the structural hierarchy are connected via a 'has role' relation. CHIRO provides links from these roles to useful other classes in other ontologies. This will allow direct connection between chemical structures (small molecules, drugs) and what they do. This could be formalized using 'capable of', in the same way Uberon and the Cell Ontology link structures to processes." ; dcterms:identifier "chiro" ; dcterms:license ; schema1:hasPart kgr:chiro.obo, kgr:chiro.owl ; schema1:name "CHEBI Integrated Role Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:chmo a schema1:Ontology ; rdfs:label "Chemical Methods Ontology" ; dcterms:description "CHMO, the chemical methods ontology, describes methods used to" ; dcterms:identifier "chmo" ; dcterms:license ; schema1:hasPart kgr:chmo.owl ; schema1:name "Chemical Methods Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:chr a schema1:Ontology ; rdfs:label "Monochrom Ontology" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Monochrom, also known as Chromo or CHR, is an automatic translation of UCSC chromosome bands to OWL classes. Each chromosome and chromosomal region is represented as an OWL class." ; dcterms:identifier "chr" ; dcterms:license ; dcterms:modified "2025-10-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:chr.model.owl ; schema1:name "Monochrom Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:cido a schema1:Ontology ; rdfs:label "Coronavirus Infectious Disease Ontology" ; dcterms:description "The Coronavirus Infectious Disease Ontology (CIDO) aims to ontologically represent and standardize various aspects of coronavirus infectious diseases, including their etiology, transmission, epidemiology, pathogenesis, diagnosis, prevention, and treatment." ; dcterms:identifier "cido" ; dcterms:license ; schema1:hasPart kgr:cido.owl ; schema1:name "Coronavirus Infectious Disease Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:ciel a schema1:Aggregator ; rdfs:label "CIEL" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Columbia International eHealth Laboratory (CIEL) dictionary is a shared open concept dictionary that provides comprehensive terminology services to OpenMRS and other health information systems. Based at Columbia University's Department of Biomedical Informatics, CIEL contains over 55,000 medical concepts mapped to standardized code systems including ICD, SNOMED CT, LOINC, RxNorm, and many others. CIEL supports open source health initiatives globally and has been recognized as both a Digital Public Good by the Digital Public Goods Alliance and a Content Public Good by Digital Square." ; dcterms:identifier "ciel" ; dcterms:license ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:athena.mappings, kgr:ciel.covid19, kgr:ciel.dictionary, kgr:ciel.mpx, kgr:ciel.ocl ; schema1:name "CIEL" ; skos:altLabel "CIEL", "CIEL Concept Dictionary", "Columbia International eHealth Laboratory" ; skos:inScheme "biomedical", "clinical", "health", "information technology" ; adms:status "Active" ; foaf:homepage . kgr:cio a schema1:Ontology ; rdfs:label "Confidence Information Ontology" ; dcterms:description "An ontology to capture confidence information about annotations." ; dcterms:identifier "cio" ; dcterms:license ; schema1:hasPart kgr:cio.obo, kgr:cio.owl ; schema1:name "Confidence Information Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:circbase a schema1:Aggregator ; rdfs:label "circBase" ; dcterms:created "2025-08-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "circBase is a database and exploration portal for circular RNAs (circRNAs), aggregating published circRNA detection datasets across multiple species, tissues, and experimental conditions, and providing search, genomic context, expression summaries, and downloadable data plus scripts for circRNA discovery." ; dcterms:identifier "circbase" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-16T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:circbase.docs, kgr:circbase.downloads, kgr:circbase.portal, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes ; schema1:name "circBase" ; skos:inScheme "biological systems", "genomics", "organisms" ; adms:status "Active" . kgr:cito a schema1:Ontology ; rdfs:label "CiTO" ; dcterms:created "2025-12-11T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CiTO (Citation Typing Ontology) is a formal ontology that provides a machine-readable vocabulary for describing the nature and type of citations within bibliographic references. It enables the semantic representation of the relationships between citing and cited scholarly works, supporting the analysis of citation networks and the characterization of how one publication cites another." ; dcterms:identifier "cito" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cito.documentation, kgr:cito.ttl, kgr:forum.graph.dump ; schema1:name "CiTO" ; doap:repository ; skos:inScheme "general", "literature" ; adms:status "Active" ; foaf:homepage . kgr:civic a schema1:DataSource ; rdfs:label "CIViC" ; dcterms:created "2025-05-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Clinical Interpretation of Variants in Cancer (CIViC) knowledgebase is a free and open resource for public use that enables the interpretation of variants in cancer by providing community-curated information about the clinical significance of genomic variants." ; dcterms:identifier "civic" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:civic.api.v1, kgr:civic.api.v2, kgr:civic.data.acceptedsubmittedvariants, kgr:civic.data.acceptedvariants, kgr:civic.data.assertions, kgr:civic.data.evidence, kgr:civic.data.features, kgr:civic.data.molecularprofile, kgr:civic.data.variantgroups, kgr:civic.data.variants, kgr:civic.site, kgr:spoke.graph ; schema1:identifier "civic" ; schema1:name "CIViC" ; skos:inScheme "biomedical", "clinical", "genomics", "health", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:cl a schema1:Ontology ; rdfs:label "Cell Ontology" ; dcterms:description "The Cell Ontology is a structured controlled vocabulary for cell types in animals." ; dcterms:identifier "cl" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:cl.cl-base.json, kgr:cl.cl-base.obo, kgr:cl.cl-base.owl, kgr:cl.cl-basic.json, kgr:cl.cl-basic.obo, kgr:cl.cl-basic.owl, kgr:cl.json, kgr:cl.obo, kgr:cl.owl, kgr:drugmechdb.graph, kgr:efo.obo, kgr:efo.owl, kgr:ibkh.graph, kgr:mechreponet.kg, kgr:pheknowlator.graph, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:spoke.graph, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Cell Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:cl-kg a schema1:KnowledgeGraph ; rdfs:label "Cell Ontology Knowledge Graph (CL-KG)" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CL-KG is a knowledge graph integrating the cell ontology and linked ontologies with hierarchical annotations of single cell transcriptomics data from CellXGene." ; dcterms:identifier "cl-kg" ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cl-kg.api.neo4j ; schema1:name "Cell Ontology Knowledge Graph (CL-KG)" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:clao a schema1:Ontology ; rdfs:label "Collembola Anatomy Ontology" ; dcterms:description "CLAO is an ontology of anatomical terms employed in morphological descriptions for the Class Collembola (Arthropoda: Hexapoda)." ; dcterms:identifier "clao" ; dcterms:license ; schema1:hasPart kgr:clao.obo, kgr:clao.owl ; schema1:name "Collembola Anatomy Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:climatemodelskg a schema1:KnowledgeGraph ; rdfs:label "Climate Models KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Climate Models KG is a knowledge graph to support evaluation and development of climate models, providing structured access to climate modeling data and relationships." ; dcterms:identifier "climatemodelskg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:climatemodelskg.sparql ; schema1:name "Climate Models KG" ; skos:inScheme "environment", "simulation" ; adms:status "Active" ; foaf:homepage . kgr:clingen a schema1:DataSource ; rdfs:label "ClinGen" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Clinical Genome Resource (ClinGen) is a National Institutes of Health (NIH)-funded resource dedicated to building a central resource that defines the clinical relevance of genes and variants for use in precision medicine and research. ClinGen brings together clinical and research experts to develop standard approaches for interpreting genomic variants, curate evidence for gene-disease relationships, and share this knowledge through freely accessible databases." ; dcterms:identifier "clingen" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-01-23T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:clingen.actionability, kgr:clingen.dosage, kgr:clingen.evrepo.api, kgr:clingen.gene-disease, kgr:clingen.variant, kgr:clingen.variant.frameworks, kgr:clingen.web.interface, kgr:disgenet.data, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "clingen" ; schema1:name "ClinGen" ; skos:inScheme "biomedical", "clinical", "genomics", "health" ; adms:status "Active" ; foaf:homepage . kgr:clinical-data-kp a schema1:KnowledgeGraph ; rdfs:label "Clinical Data KP" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Translator Knowledge Provider integrating clinical data." ; dcterms:identifier "clinical-data-kp" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:clinical-data-kp.docs, kgr:clinical-data-kp.portal ; schema1:name "Clinical Data KP" ; skos:inScheme "clinical", "digital health", "health", "medical imaging" ; adms:status "Active" ; foaf:homepage . kgr:clinicalkg a schema1:KnowledgeGraph ; rdfs:label "Clinical Knowledge Graph (CKG)" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Clinical Knowledge Graph (CKG) is an open-source platform that integrates proteomics and clinical data with knowledge from diverse biomedical databases and literature to support precision medicine. The CKG has reported scale of ~16 million nodes and ~220 million relationships and provides tooling for analysis, reporting, and knowledge discovery." ; dcterms:identifier "clinicalkg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:clinicalkg.graph ; schema1:name "Clinical Knowledge Graph (CKG)" ; doap:repository ; skos:inScheme "biomedical", "clinical", "health", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:clinicaltrialsgov a schema1:DataSource ; rdfs:label "ClinicalTrials.gov" ; dcterms:created "2025-05-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ClinicalTrials.gov is a database of privately and publicly funded clinical studies conducted around the world, maintained by the National Library of Medicine (NLM) at the National Institutes of Health (NIH). The registry contains information on over 400,000 studies covering a wide range of diseases and conditions, providing details about study design, locations, eligibility criteria, interventions, outcomes, and results. ClinicalTrials.gov serves as the primary registry for clinical trials required by the FDA Amendments Act and WHO International Clinical Trials Registry Platform (ICTRP)." ; dcterms:identifier "clinicaltrialsgov" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:aact.database, kgr:aact.downloads, kgr:clinicaltrialsgov.aact, kgr:clinicaltrialsgov.api, kgr:clinicaltrialsgov.docs, kgr:clinicaltrialsgov.downloads, kgr:clinicaltrialsgov.search, kgr:disgenet.data, kgr:genecards.clinical.trials, kgr:indra.cogex.code, kgr:repodb.full_dataset, kgr:spoke.graph ; schema1:identifier "clinicaltrials" ; schema1:name "ClinicalTrials.gov" ; doap:repository ; skos:inScheme "biomedical", "clinical", "drug discovery", "health", "precision medicine", "public health", "translational" ; skos:notation "FAIRsharing.mewhad" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:clinvar a schema1:DataSource ; rdfs:label "ClinVar" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ClinVar is a freely accessible, public archive of reports of human genetic variations and their relationships to human health. It collects and presents data on variants found in patient samples, classifications for diseases and drug responses, and supporting evidence. ClinVar enables access to and communication about the clinical significance of genetic variants, providing healthcare professionals, researchers, and the public with vital information for interpreting genetic test results." ; dcterms:identifier "clinvar" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:clinvar.api, kgr:clinvar.tab, kgr:clinvar.vcf.grch37, kgr:clinvar.vcf.grch38, kgr:clinvar.web, kgr:clinvar.xml, kgr:disgenet.data, kgr:genecards.disease.associations, kgr:genecards.variant.data, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:pheknowlator.graph, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "clinvar" ; schema1:name "ClinVar" ; skos:inScheme "biomedical", "clinical", "genomics", "health", "precision medicine", "translational" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:clo a schema1:Ontology ; rdfs:label "Cell Line Ontology" ; dcterms:description "An ontology to standardize and integrate cell line information and to support computer-assisted reasoning." ; dcterms:identifier "clo" ; dcterms:license ; schema1:hasPart kgr:clo.owl, kgr:efo.obo, kgr:efo.owl, kgr:pheknowlator.graph ; schema1:name "Cell Line Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:clue a schema1:DataSource ; rdfs:label "CLUE" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CLUE (formerly known as the Connectivity Map or CMap 2.0) is a comprehensive resource for connecting drugs, genes, and diseases through large-scale perturbational data. Built and maintained by the Broad Institute, CLUE provides access to over 1.3 million gene expression profiles from the LINCS L1000 assay, covering more than 42,000 perturbagens (drugs, genetic reagents, and other compounds) tested across multiple cell lines. The platform enables researchers to discover connections between diseases, drugs, and biological mechanisms through gene expression signatures." ; dcterms:identifier "clue" ; dcterms:modified "2025-10-07T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings ; schema1:name "CLUE" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "genomics", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:broad . kgr:clyh a schema1:Ontology ; rdfs:label "Clytia hemisphaerica Development and Anatomy Ontology" ; dcterms:description "The Clytia hemisphaerica Development and Anatomy Ontology (CLYH) describes the anatomical and developmental features of the Clytia hemisphaerica life cycle." ; dcterms:identifier "clyh" ; dcterms:license ; schema1:hasPart kgr:clyh.obo, kgr:clyh.owl ; schema1:name "Clytia hemisphaerica Development and Anatomy Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:cm4ai_talent_kg a schema1:KnowledgeGraph ; rdfs:label "CM4AI Talent KG" ; dcterms:created "2025-07-16T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge graph containing connections between researchers, projects, and publications centering on members of the Bridge2AI Consortium and the Cell Maps for AI (CM4AI) project." ; dcterms:identifier "cm4ai_talent_kg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cm4ai_talent_kg.web_interface ; schema1:name "CM4AI Talent KG" ; skos:inScheme "literature" ; adms:status "Active" ; foaf:homepage . kgr:cmap a schema1:DataSource ; rdfs:label "Connectivity Map" ; dcterms:created "2025-01-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Connectivity Map (CMap) is a groundbreaking genome-scale perturbation resource containing over 3 million gene expression profiles cataloging transcriptional responses to chemical, genetic, and disease perturbations across multiple cancer cell types. Developed by the Broad Institute as part of the NIH Library of Integrated Network-Based Cellular Signatures (LINCS) program, CMap addresses fundamental challenges in understanding protein function and small molecule mechanisms of action by creating a comprehensive catalog of cellular signatures representing systematic perturbation. The database employs the L1000 high-throughput gene expression assay, which directly measures ~978 landmark genes and computationally infers expression of ~11,350 additional genes using inference algorithms, providing a cost-effective reduced representation of the transcriptome. CMap contains signatures from approximately 5,000 small-molecule compounds, 3,000 genetic reagents including shRNAs, CRISPR knockdowns, and overexpression constructs, tested primarily across nine core cancer cell lines that include A375, A549, HA1E, HCC515, HT29, HEPG2, MCF7, PC3, and VCAP. The resource enables researchers to query with their own gene expression signatures to identify perturbagens that induce similar or opposing transcriptional responses, thereby discovering unexpected connections between diseases, drug mechanisms, and protein functions. CMap data is accessible through CLUE, a cloud-based unified environment providing user-friendly web applications including query tools, data browsers, metadata search, and visualization apps for exploring perturbation-driven gene expression patterns. The database supports diverse research applications including drug repurposing by identifying compounds with similar mechanisms, target identification by finding small molecules that mimic genetic perturbations, disease mechanism understanding by connecting disease signatures to perturbagen responses, and biomarker discovery through systematic analysis of transcriptional responses. While personalized support ended in July 2022, all data, tools, and extensive documentation through Connectopedia remain fully accessible, with over 1.5 million replicate-collapsed signatures and 3 million profiles available for download and programmatic access via Python libraries and APIs." ; dcterms:identifier "cmap" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-01-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cmap.clue, kgr:cmap.connectopedia, kgr:cmap.data_downloads, kgr:cmap.python_api, kgr:cmap.query_app ; schema1:identifier "cmap" ; schema1:name "Connectivity Map" ; doap:repository ; skos:altLabel "CMap", "Connectivity Map", "LINCS L1000" ; skos:inScheme "drug discovery", "genomics", "pharmacology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:broad . kgr:cmf a schema1:Ontology ; rdfs:label "CranioMaxilloFacial ontology" ; dcterms:description "Description unavailable." ; dcterms:identifier "cmf" ; dcterms:license "Not specified" ; schema1:name "CranioMaxilloFacial ontology" ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:cmo a schema1:Ontology ; rdfs:label "Clinical measurement ontology" ; dcterms:description "Morphological and physiological measurement records generated from clinical and model organism research and health programs." ; dcterms:identifier "cmo" ; dcterms:license ; schema1:hasPart kgr:cmo.obo, kgr:cmo.owl ; schema1:name "Clinical measurement ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:cob a schema1:Ontology ; rdfs:label "Core Ontology for Biology and Biomedicine" ; dcterms:description "COB brings together key terms from a wide range of OBO projects to improve interoperability." ; dcterms:identifier "cob" ; dcterms:license ; schema1:hasPart kgr:cob.cob-base.owl, kgr:cob.cob-native.owl, kgr:cob.cob-to-external.owl, kgr:cob.owl, kgr:cob.products.demo-cob.owl, kgr:efo.obo, kgr:efo.owl ; schema1:name "Core Ontology for Biology and Biomedicine" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:cog a schema1:DataSource ; rdfs:label "COG" ; dcterms:created "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A resource for orthology-based functional classification of proteins into clusters of orthologous groups (COGs) across complete genomes." ; dcterms:identifier "cog" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cog.download.cog-24-csv, kgr:cog.download.cogorg24-fasta, kgr:cog.portal, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "COG" ; skos:altLabel "COG", "Clusters of Orthologous Groups" ; skos:inScheme "biological systems", "genomics", "microbiology" ; adms:status "Active" ; foaf:homepage . kgr:cohd a schema1:DataSource ; rdfs:label "Columbia Open Health Data (COHD)" ; dcterms:created "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Columbia Open Health Data (COHD) API provides access to observed clinical frequencies and co-occurrence frequencies from electronic health records at Columbia University Medical Center. The database contains counts and frequencies of conditions, procedures, drug exposures, and patient demographics from the OHDSI common data model, along with statistical associations between clinical concepts. To protect patient privacy, all concepts where count ≤10 were excluded and counts were randomized using Poisson distribution. COHD offers multiple datasets including 5-year (2013-2017) and lifetime data, both in hierarchical and non-hierarchical forms, plus beta temporal co-occurrence data." ; dcterms:identifier "cohd" ; dcterms:modified "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cohd.api, kgr:cohd.docs, kgr:cohd.notebooks, kgr:cohd.portal, kgr:translator.cohd.graph ; schema1:identifier "cohd" ; schema1:name "Columbia Open Health Data (COHD)" ; doap:repository ; skos:inScheme "clinical", "health", "precision medicine", "public health" ; adms:status "Active" ; foaf:homepage . kgr:colao a schema1:Ontology ; rdfs:label "Coleoptera Anatomy Ontology (COLAO)" ; dcterms:description "The Coleoptera Anatomy Ontology contains terms used for describing the anatomy and phenotype of beetles in biodiversity research. It has been built using the Ontology Develoment Kit, with the Ontology for the Anatomy of the Insect Skeleto-Muscular system (AISM) as a backbone." ; dcterms:identifier "colao" ; dcterms:license ; schema1:hasPart kgr:colao.obo, kgr:colao.owl ; schema1:name "Coleoptera Anatomy Ontology (COLAO)" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:compartments a schema1:DataSource ; rdfs:label "COMPARTMENTS" ; dcterms:created "2025-07-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "COMPARTMENTS is an evidence-weighted subcellular localization knowledge resource that integrates experimental data, manual curation, high-throughput localization screens, automatic text mining, and sequence-based predictions to assign proteins to cellular compartments with confidence scores." ; dcterms:identifier "compartments" ; dcterms:license ; dcterms:modified "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bioteque.embeddings, kgr:compartments.downloads, kgr:compartments.portal, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "COMPARTMENTS" ; skos:inScheme "biological systems", "proteomics", "systems biology" ; adms:status "Active" . kgr:compath a schema1:DataSource ; rdfs:label "ComPath" ; dcterms:created "2026-01-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A pathway mapping and harmonization framework for integrating and comparing pathway knowledge across multiple pathway databases." ; dcterms:identifier "compath" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:compath.catalog, kgr:compath.curation-protocol, kgr:compath.overview, kgr:compath.portal, kgr:compath.similarity, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:name "ComPath" ; skos:altLabel "ComPath" ; skos:inScheme "biological systems", "pathways" ; adms:status "Active" ; foaf:homepage . kgr:complexportal a schema1:DataSource ; rdfs:label "Complex Portal" ; dcterms:created "2025-07-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Complex Portal is an encyclopaedic resource of macromolecular complexes from model organisms, providing manually curated and high-confidence machine-learning predicted protein complexes with comprehensive structural and functional annotation." ; dcterms:identifier "complexportal" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-12-15T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , , , , , , , , , , , , , , , , , , , , , , , , , , ; schema1:hasPart kgr:complexportal.arabidopsis.complextab, kgr:complexportal.bsubtilis.complextab, kgr:complexportal.cattle.complextab, kgr:complexportal.chicken.complextab, kgr:complexportal.complextab, kgr:complexportal.dictyostelium.complextab, kgr:complexportal.documentation, kgr:complexportal.dog.complextab, kgr:complexportal.ecoli.complextab, kgr:complexportal.fissionyeast.complextab, kgr:complexportal.fruitfly.complextab, kgr:complexportal.hpylori.complextab, kgr:complexportal.human.complextab, kgr:complexportal.human.psi25, kgr:complexportal.human.psi30, kgr:complexportal.lamprey.complextab, kgr:complexportal.leishmania.complextab, kgr:complexportal.mouse.complextab, kgr:complexportal.mouse.psi25, kgr:complexportal.paeru.complextab, kgr:complexportal.pig.complextab, kgr:complexportal.portal, kgr:complexportal.psi25, kgr:complexportal.psi30, kgr:complexportal.pufferfish.takifugu.complextab, kgr:complexportal.pufferfish.tetraodon.complextab, kgr:complexportal.rabbit.complextab, kgr:complexportal.rat.complextab, kgr:complexportal.sarscov2.complextab, kgr:complexportal.seaurchin.complextab, kgr:complexportal.sheep.complextab, kgr:complexportal.toxoplasma.complextab, kgr:complexportal.webservice, kgr:complexportal.worm.complextab, kgr:complexportal.xenopus.complextab, kgr:complexportal.yeast.psi25, kgr:complexportal.zebrafish.complextab, kgr:mechreponet.kg ; schema1:name "Complex Portal" ; doap:repository ; skos:inScheme "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:connections-hypothesis-kp a schema1:KnowledgeGraph ; rdfs:label "Connections Hypothesis KP" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Translator Knowledge Provider exploring connections hypotheses." ; dcterms:identifier "connections-hypothesis-kp" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:connections-hypothesis-kp.code, kgr:connections-hypothesis-kp.smartapi ; schema1:name "Connections Hypothesis KP" ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:connectivitymap a schema1:DataSource ; rdfs:label "Connectivity Map" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Connectivity Map (CMap) is a collection of genome-wide transcriptional expression data from cultured human cells treated with bioactive small molecules and simple pattern-matching algorithms that together enable the discovery of functional connections between drugs, genes, and diseases through common gene-expression changes. The original CMap resource is now integrated into the CLUE platform." ; dcterms:identifier "connectivitymap" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-07T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:pharmkg.graph, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Connectivity Map" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "genomics" ; adms:status "Inactive" ; foaf:homepage ; foaf:maker kgr:broad . kgr:coralkinome a schema1:DataSource ; rdfs:label "CoralKinome" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CoralKinome is a comprehensive resource for coral kinase sequences and annotations, providing phylogenetic and functional information about protein kinases in coral species to support coral biology research and conservation efforts." ; dcterms:identifier "coralkinome" ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kinace.portal ; schema1:name "CoralKinome" ; skos:altLabel "Coral Kinome Database", "CoralKinome" ; skos:inScheme "genomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:corum a schema1:DataSource ; rdfs:label "CORUM" ; dcterms:created "2025-07-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CORUM (Comprehensive Resource of Mammalian Protein Complexes) is a curated database of experimentally characterized protein complexes from mammalian organisms, particularly human, mouse, and rat, with a focus on manually annotated information from scientific literature." ; dcterms:identifier "corum" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2025-09-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , , ; schema1:hasPart kgr:bioteque.embeddings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:corum.all_complexes, kgr:corum.core_complexes, kgr:corum.mitab, kgr:corum.psi_mi ; schema1:name "CORUM" ; doap:repository ; skos:inScheme "biomedical", "chemistry and biochemistry", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:cosmic a schema1:DataSource ; rdfs:label "COSMIC" ; dcterms:created "2025-07-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "COSMIC (Catalogue Of Somatic Mutations In Cancer) is a comprehensive resource for somatic mutations in human cancer. It curates, standardizes, and integrates mutation data across genes, cancer types, and samples, and provides access via a web portal and licensed downloads." ; dcterms:identifier "cosmic" ; dcterms:license ; dcterms:modified "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:cosmic.downloads, kgr:cosmic.kb.overview, kgr:cosmic.portal, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes ; schema1:identifier "cosmic" ; schema1:name "COSMIC" ; skos:inScheme "biomedical", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:cpathkg a schema1:KnowledgeGraph ; rdfs:label "C-Path Knowledge Graph" ; dcterms:created "2025-04-11T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The C-Path Knowledge Graph project is intended to increase discoverability of rare disease datasets through integration with the Monarch Knowlege Graph." ; dcterms:identifier "cpathkg" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cpathkg.code ; schema1:name "C-Path Knowledge Graph" ; skos:inScheme "health" ; adms:status "Active" . kgr:cpdb a schema1:Aggregator ; rdfs:label "ConsensusPathDB" ; dcterms:created "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ConsensusPathDB integrates molecular interaction data from over 30 public databases, including protein-protein, genetic, metabolic, signaling, gene regulatory and drug-target interactions. It provides comprehensive pathway and functional analysis tools, allowing users to explore molecular networks and pathways from multiple sources through a unified interface. The resource was last updated in 2016 and the main website is no longer accessible." ; dcterms:identifier "cpdb" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cpdb.downloads, kgr:cpdb.web ; schema1:identifier "cpdb" ; schema1:name "ConsensusPathDB" ; skos:altLabel "CPDB" ; skos:inScheme "biological systems", "biomedical", "chemistry and biochemistry", "pathways", "proteomics", "systems biology" ; adms:status "Inactive" ; foaf:homepage . kgr:cpic a schema1:Resource ; rdfs:label "CPIC" ; dcterms:created "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Clinical Pharmacogenetics Implementation Consortium (CPIC) creates, curates, and disseminates freely available, peer-reviewed, evidence-based, and updatable clinical practice guidelines that translate patient pharmacogenetic test results into actionable prescribing decisions. CPIC also publishes structured gene–drug annotations, allele function data, standardized terminology resources, and implementation tools (database, API, SOPs, educational materials) to accelerate pharmacogenomics in clinical care." ; dcterms:identifier "cpic" ; dcterms:license ; dcterms:modified "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cpic.alleles, kgr:cpic.api, kgr:cpic.cyp2d6_translation, kgr:cpic.genes_drugs, kgr:cpic.guidelines, kgr:cpic.onepager, kgr:cpic.overview.slides, kgr:cpic.portal, kgr:cpic.sop, kgr:cpic.term_standardization, kgr:epigraphdb.graph ; schema1:name "CPIC" ; skos:inScheme "biomedical", "clinical", "drug discovery", "health" ; adms:status "Active" ; foaf:homepage . kgr:cqs a schema1:DataSource ; rdfs:label "Translator Curated Query Service" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Translator Curated Query Service (CQS) is an SRI service providing ARA-like reasoning capabilities through customizable inference rules captured as templates, generating predicted edges with provenance metadata and scoring." ; dcterms:identifier "cqs" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cqs.code, kgr:cqs.docs ; schema1:identifier "cqs" ; schema1:name "Translator Curated Query Service" ; skos:altLabel "CQS", "Curated Query Service" ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:crd a schema1:Aggregator ; rdfs:label "Comparative RNA Database (CRD)" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Comparative RNA Database (CRD) was an aggregator of RNA sequence and structure data, but is no longer available. This resource is considered unresponsive; only its metadata and publication are retained for reference." ; dcterms:identifier "crd" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-10T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "Comparative RNA Database (CRD)" ; skos:inScheme "biological systems", "genomics" ; adms:status "unresponsive" . kgr:creeds a schema1:DataSource ; rdfs:label "CREEDS" ; dcterms:created "2025-07-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CREEDS (CRowd Extracted Expression of Differential Signatures) is a database of crowdsourced gene expression signatures for drug, genetic, and disease perturbations." ; dcterms:identifier "creeds" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-10T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bioteque.embeddings, kgr:creeds.automatic_disease_signatures, kgr:creeds.automatic_single_drug, kgr:creeds.automatic_single_gene, kgr:creeds.drugmatrix, kgr:creeds.manual_disease_signatures, kgr:creeds.manual_single_drug, kgr:creeds.manual_single_gene, kgr:creeds.web_interface ; schema1:name "CREEDS" ; skos:inScheme "genomics", "pharmacology" ; adms:status "Active" . kgr:cro a schema1:Ontology ; rdfs:label "Contributor Role Ontology" ; dcterms:description "A classification of the diverse roles performed in the work leading to a published research output in the sciences. Its purpose to provide transparency in contributions to scholarly published work, to enable improved systems of attribution, credit, and accountability." ; dcterms:identifier "cro" ; dcterms:license ; schema1:hasPart kgr:cro.owl ; schema1:name "Contributor Role Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:ctd a schema1:DataSource ; rdfs:label "Comparative Toxicogenomics Database" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "CTD is a robust, publicly available database that aims to advance understanding about how environmental exposures affect human health." ; dcterms:identifier "ctd" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:aop-db.data, kgr:automat.ctd, kgr:bioteque.embeddings, kgr:cam-kp.ctd-interactions, kgr:ibkh.graph, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:mechreponet.kg, kgr:pheknowlator.graph, kgr:translator.ctd.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "ctd" ; schema1:name "Comparative Toxicogenomics Database" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:cteno a schema1:Ontology ; rdfs:label "Ctenophore Ontology" ; dcterms:description "An anatomical and developmental ontology for ctenophores (Comb Jellies)" ; dcterms:identifier "cteno" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:cteno.owl ; schema1:name "Ctenophore Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:ctkp a schema1:KnowledgeGraph ; rdfs:label "Clinical Trials KP" ; dcterms:created "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Clinical Trials Knowledge Provider (CTKP) is a Translator knowledge provider maintained by the Multiomics Provider that exposes clinical trial-derived associations from ClinicalTrials.gov (via AACT), including trial interventions, conditions, and related biomedical entities." ; dcterms:identifier "ctkp" ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ctkp.docs, kgr:translator.ctkp.graph ; schema1:name "Clinical Trials KP" ; doap:repository ; skos:inScheme "clinical", "health", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:cto a schema1:Ontology ; rdfs:label "CTO: Core Ontology of Clinical Trials" ; dcterms:description "The core Ontology of Clinical Trials (CTO) will serve as a structured resource integrating basic terms and concepts in the context of clinical trials. Thereby covering clinicaltrails.gov. CoreCTO will serve as a basic ontology to generate extended versions for specific applications such as annotation of variables in study documents from clinical trials." ; dcterms:identifier "cto" ; dcterms:license ; schema1:hasPart kgr:cto.owl ; schema1:name "CTO: Core Ontology of Clinical Trials" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:ctrp a schema1:DataSource ; rdfs:label "Cancer Therapeutics Response Portal" ; dcterms:created "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Cancer Therapeutics Response Portal (CTRP) is a comprehensive cancer cell line profiling resource that links genetic, lineage, and other cellular features of cancer cell lines to small-molecule sensitivity with the goal of accelerating discovery of patient-matched cancer therapeutics. Developed by researchers at the Broad Institute Center for the Science of Therapeutics as part of the NCI Cancer Target Discovery and Development (CTD2) Network, CTRP measured the sensitivity of 860 deeply characterized human cancer cell lines encompassing 25 lineages to an Informer Set of 481 small-molecule probes and drugs that selectively target distinct nodes in cell circuitry. The resource provides correlations between small-molecule sensitivity patterns and basal gene expression profiles from the Cancer Cell Line Encyclopedia (CCLE) across approximately 19,000 transcripts, enabling identification of mechanisms of action, cellular targets, metabolic processing pathways, and drug resistance mechanisms. CTRP measurements were performed over 16-point concentration ranges in duplicate using automated high-throughput workflows, with cellular ATP levels assessed 72 hours after compound treatment as a surrogate for viability. The portal provides interactive tools for exploring clustering by small molecule and cell line, enrichment analyses for annotations, correlations to copy-number and gene-expression data, on-the-fly correlation analysis, box-whisker visualizations, drill-down to scatter plots and concentration-response curves, and filtering by lineage, subtype, or growth mode. CTRP enables correlation of chemical sensitivity with basal gene expression to reveal direct target connections, target pathway relationships, metabolic activation mechanisms, small-molecule import and export mechanisms, and novel therapeutic targets, supporting the identification of predictive biomarkers for patient-matched therapeutics and the systematic characterization of small-molecule mechanisms of action." ; dcterms:identifier "ctrp" ; dcterms:isReferencedBy , , ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:ctrp.data, kgr:ctrp.portal ; schema1:identifier "ctrp" ; schema1:name "Cancer Therapeutics Response Portal" ; skos:altLabel "CTRP", "Cancer Therapeutics Response Portal" ; skos:inScheme "drug discovery", "pharmacology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:broad . kgr:cvdo a schema1:Ontology ; rdfs:label "Cardiovascular Disease Ontology" ; dcterms:description "An ontology to describe entities related to cardiovascular diseases" ; dcterms:identifier "cvdo" ; dcterms:license ; schema1:hasPart kgr:cvdo.owl ; schema1:name "Cardiovascular Disease Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:dailymed a schema1:DataSource ; rdfs:label "DailyMed" ; dcterms:created "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DailyMed is the National Library of Medicine's official provider of FDA drug label information, offering a searchable database of the most recent labeling submitted to the Food and Drug Administration by pharmaceutical companies and currently in use. As a comprehensive public resource providing over 154,000 drug labels, DailyMed contains labeling for prescription and nonprescription drugs for both human and animal use, as well as additional products including medical gases, devices, cosmetics, dietary supplements, and medical foods. All labeling information is formatted in Structured Product Labeling (SPL), an HL7 standard that provides a standardized, machine-readable format for drug product information enabling interoperability between healthcare systems. DailyMed serves as the authoritative source for current package inserts, medication guides, patient information sheets, and prescribing information directly as submitted by manufacturers to the FDA. The database is updated daily as new labeling is submitted and approved, ensuring users have access to the most current drug safety and efficacy information available. DailyMed provides detailed information including indications and usage, dosage and administration, contraindications, warnings and precautions, adverse reactions, drug interactions, use in specific populations, clinical pharmacology, and how the drug is supplied." ; dcterms:identifier "dailymed" ; dcterms:modified "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:dailymed.mapping_files, kgr:dailymed.rss_feeds, kgr:dailymed.spl_files, kgr:dailymed.web_services, kgr:dailymed.website ; schema1:identifier "dailymed" ; schema1:name "DailyMed" ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:darkkinasekb a schema1:DataSource ; rdfs:label "Dark Kinase Knowledgebase" ; dcterms:created "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Dark Kinase Knowledgebase (DKK) is a comprehensive resource focused on providing data and reagents for 162 poorly studied or 'dark' kinases to the broader research community. Supported through NIH's Illuminating the Druggable Genome (IDG) Program, the DKK collects and disseminates experimental and computational data that provides functional context for understudied kinases, including parallel reaction monitoring peptides, protein interactions, NanoBRET reagents, kinase-specific compounds, tissue expression profiles, and functional relationships." ; dcterms:identifier "darkkinasekb" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:darkkinasekb.compounds, kgr:darkkinasekb.expression, kgr:darkkinasekb.github, kgr:darkkinasekb.interactions, kgr:darkkinasekb.portal, kgr:darkkinasekb.prm, kgr:darkkinasekb.synapse, kgr:kinace.portal ; schema1:identifier "darkkinasekb" ; schema1:name "Dark Kinase Knowledgebase" ; skos:altLabel "DKK" ; skos:inScheme "genomics", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:date a schema1:DataSource ; rdfs:label "Drugs to target pAthways by the Tissue Expression" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DATE (Drugs to target pAthways by the Tissue Expression) was a computational resource integrating drug targets with pathway information and tissue-specific gene expression to predict drug effects and therapeutic opportunities. The resource appears to be archived." ; dcterms:identifier "date" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:date.archive ; schema1:identifier "date" ; schema1:name "Drugs to target pAthways by the Tissue Expression" ; skos:altLabel "DATE" ; skos:inScheme "pharmacology", "systems biology" ; adms:status "Inactive" ; foaf:homepage . kgr:dbsnp a schema1:DataSource ; rdfs:label "dbSNP" ; dcterms:created "2025-05-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "dbSNP contains human single nucleotide variations, microsatellites, and small-scale insertions and deletions along with publication, population frequency, molecular consequence, and genomic and RefSeq mapping information for both common variations and clinical mutations." ; dcterms:identifier "dbsnp" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:biomarkerkg.nodes.variant, kgr:dbsnp.api, kgr:dbsnp.json, kgr:dbsnp.site, kgr:dbsnp.variation.api, kgr:genecards.variant.data, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes ; schema1:identifier "dbsnp" ; schema1:name "dbSNP" ; doap:repository ; skos:inScheme "biological systems", "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:dc a schema1:DataModel ; rdfs:label "Dublin Core Metadata Terms" ; dcterms:created "2025-06-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Dublin Core Metadata Initiative (DCMI) Metadata Terms is an authoritative specification of metadata terms for resource description. It includes the fifteen elements of the Dublin Core Metadata Element Set plus several dozen properties, classes, datatypes, and vocabulary encoding schemes. The terms are intended for use in combination with metadata terms from other vocabularies in application profiles. DCMI metadata terms are expressed in RDF vocabularies for use in Linked Data and are published as ISO standards (ISO 15836-1:2017 for the original 15 elements, ISO 15836-2:2019 for extended terms)." ; dcterms:identifier "dc" ; dcterms:isReferencedBy , ; dcterms:modified "2025-10-21T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:dc.classes, kgr:dc.dcmitype_rdf, kgr:dc.elements_rdf, kgr:dc.elements_spec, kgr:dc.encoding_schemes, kgr:dc.terms_rdf, kgr:dc.terms_spec, kgr:edam.csv, kgr:edam.owl, kgr:edam.tsv, kgr:efo.obo, kgr:efo.owl, kgr:forum.graph.dump ; schema1:name "Dublin Core Metadata Terms" ; doap:repository ; skos:inScheme "information technology", "literature" ; adms:status "Active" ; foaf:homepage . kgr:dc_cl a schema1:Ontology ; rdfs:label "Dendritic cell" ; dcterms:description "Description unavailable." ; dcterms:identifier "dc_cl" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Dendritic cell" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:dct a schema1:Ontology ; rdfs:label "Dublin Core Terms" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Dublin Core Metadata Terms (DCT) is a vocabulary of standardized metadata elements for describing resources, providing interoperable metadata standards for resource discovery across digital libraries and information systems." ; dcterms:identifier "dct" ; dcterms:modified "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Dublin Core Terms" ; skos:altLabel "DCMI Terms", "DCT", "Dublin Core", "Dublin Core Metadata Initiative" ; adms:status "Active" ; foaf:homepage . kgr:ddanat a schema1:Ontology ; rdfs:label "Dictyostelium discoideum anatomy" ; dcterms:description "A structured controlled vocabulary of the anatomy of the slime-mold Dictyostelium discoideum" ; dcterms:identifier "ddanat" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:ddanat.obo, kgr:ddanat.owl ; schema1:name "Dictyostelium discoideum anatomy" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:ddinter a schema1:DataSource ; rdfs:label "DDinter" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DDInter is an open-access database specific to drug-drug interactions (DDIs) with comprehensive annotations including mechanism descriptions, risk levels, management strategies, and alternative medications to improve clinical decision-making and patient safety." ; dcterms:identifier "ddinter" ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:ddinter.ddi_annotations ; schema1:identifier "ddinter" ; schema1:name "DDinter" ; skos:altLabel "DDInter" ; skos:inScheme "biomedical", "clinical", "drug discovery", "health", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:ddpheno a schema1:Ontology ; rdfs:label "Dictyostelium discoideum phenotype ontology" ; dcterms:description "A structured controlled vocabulary of phenotypes of the slime-mould Dictyostelium discoideum." ; dcterms:identifier "ddpheno" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:ddpheno.obo, kgr:ddpheno.owl ; schema1:name "Dictyostelium discoideum phenotype ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:depmap a schema1:DataSource ; rdfs:label "DepMap" ; dcterms:created "2025-10-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Cancer Dependency Map (DepMap) is a genome-wide pooled CRISPR-Cas9 knockout and small molecule screen of cancer cell lines. The goal of DepMap is to systematically identify cancer dependencies and the biomarkers that predict them. DepMap provides open access to key cancer dependencies, analytical tools, and visualization resources for the research community." ; dcterms:identifier "depmap" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-10-09T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:depmap.cell_line_info, kgr:depmap.cell_line_selector, kgr:depmap.context_explorer, kgr:depmap.copy_number, kgr:depmap.crispr_gene_effects, kgr:depmap.data_explorer, kgr:depmap.downloads, kgr:depmap.drug_sensitivity, kgr:depmap.expression_data, kgr:depmap.metabolomics, kgr:depmap.mutations, kgr:depmap.portal, kgr:depmap.proteomics, kgr:depmap.target_discovery ; schema1:identifier "depmap" ; schema1:name "DepMap" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "genomics", "health", "precision medicine" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:broad . kgr:dgidb a schema1:DataSource ; rdfs:label "DGIdb" ; dcterms:created "2025-05-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Drug Gene Interaction Database (DGIdb) is a resource that consolidates disparate data sources describing drug-gene interactions and gene druggability to help researchers identify actionable drug targets or repurposable drugs for genes of interest." ; dcterms:identifier "dgidb" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2026-01-23T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:dgidb.api, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:translator.dgidb.graph ; schema1:identifier "dgidb" ; schema1:name "DGIdb" ; doap:repository ; skos:inScheme "drug discovery", "genomics", "health", "pharmacology", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:dictybase a schema1:DataSource ; rdfs:label "dictyBase" ; dcterms:created "2025-08-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "dictyBase is a comprehensive genomic database for the social amoeba Dictyostelium discoideum and related species. It provides genomic, phenotypic, and molecular data including gene annotations, protein sequences, expression data, phenotypes, literature, and community annotations. The database serves as the central resource for Dictyostelium researchers worldwide." ; dcterms:identifier "dictybase" ; dcterms:modified "2025-10-07T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:dictybase.annotations.gff, kgr:dictybase.genome.browser, kgr:dictybase.genome.fasta, kgr:dictybase.graphql.api, kgr:dictybase.proteins.fasta, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:identifier "dictybase" ; schema1:name "dictyBase" ; doap:repository ; skos:inScheme "biological systems", "genomics", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:dideo a schema1:Ontology ; rdfs:label "Drug-drug Interaction and Drug-drug Interaction Evidence Ontology" ; dcterms:description "The Potential Drug-drug Interaction and Potential Drug-drug Interaction Evidence Ontology" ; dcterms:identifier "dideo" ; dcterms:license ; schema1:hasPart kgr:dideo.owl ; schema1:name "Drug-drug Interaction and Drug-drug Interaction Evidence Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:dinto a schema1:Ontology ; rdfs:label "The Drug-Drug Interactions Ontology" ; dcterms:description "A formal represention for drug-drug interactions knowledge." ; dcterms:identifier "dinto" ; dcterms:license ; schema1:hasPart kgr:dinto.owl ; schema1:name "The Drug-Drug Interactions Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:dip a schema1:DataSource ; rdfs:label "Database of Interacting Proteins" ; dcterms:created "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Database of Interacting Proteins (DIP) is a curated biological database that catalogs experimentally determined interactions between proteins, developed and maintained by the research group of David Eisenberg at the University of California Los Angeles (UCLA). Established in 2002, DIP combines information from diverse sources to create a unified, consistent set of protein-protein interactions with both manual expert curation and automated computational approaches that leverage knowledge extracted from the most reliable core subset of the data. DIP serves as a member of the International Molecular Exchange (IMEx) Consortium, an international collaboration of major public providers of protein interaction data including IntAct, MINT, BioGRID, and others that work together to avoid duplication of curation efforts by collecting data from non-overlapping sources and sharing curated interaction data. The database enables searches through its web interface based on multiple criteria including interactions described in specific journal articles, interactions supported by particular types of experimental evidence, and protein identifiers or sequences. DIP data have been curated using both manual approaches by expert biologists and automated computational methods that utilize machine learning and network analysis of the high-confidence core interaction data. The IMEx consortium developed the HUPO Proteomics Standards Initiative Molecular Interaction (HUPO-PSI-MI) XML format, which has become widely implemented for standardizing molecular interaction data representation. All information within DIP is freely available under a Creative Commons Attribution-NoDerivatives 3.0 license. DIP provides downloads of complete datasets and specialized subsets, supporting integration with other protein interaction databases and serving as a foundational resource for systems biology, network analysis, and protein function prediction studies." ; dcterms:identifier "dip" ; dcterms:isReferencedBy , , ; dcterms:modified "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:dip.downloads, kgr:dip.search, kgr:irefindex.database, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:identifier "dip" ; schema1:name "Database of Interacting Proteins" ; skos:altLabel "DIP", "Database of Interacting Proteins" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:disbiome a schema1:DataSource ; rdfs:label "Disbiome" ; dcterms:created "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Database of microbiome-disease associations, cataloging relationships between microbial taxa and human diseases based on experimental and clinical evidence." ; dcterms:identifier "disbiome" ; dcterms:modified "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw ; schema1:name "Disbiome" ; skos:altLabel "Disbiome", "Disbiome Database" ; skos:inScheme "biomedical", "clinical", "health", "microbiology" ; adms:status "Active" ; foaf:homepage . kgr:disdriv a schema1:Ontology ; rdfs:label "Disease Drivers Ontology" ; dcterms:description "Ontology for drivers and triggers of human diseases, built to classify ExO ontology exposure stressors. An application ontology. Built in collaboration with EnvO, ExO, ECTO and ChEBI." ; dcterms:identifier "disdriv" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:disdriv.owl ; schema1:name "Disease Drivers Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:diseases a schema1:Aggregator ; rdfs:label "DISEASES" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DISEASES is a weekly updated database that integrates evidence on disease-gene associations from automatic text mining, manually curated literature, cancer mutation data, and genome-wide association studies. It provides confidence scores to facilitate comparison of different types and sources of evidence." ; dcterms:identifier "diseases" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:amyco.annotations, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:diseases.dictionary, kgr:diseases.experiments-filtered, kgr:diseases.experiments-full, kgr:diseases.integrated-full, kgr:diseases.knowledge-filtered, kgr:diseases.knowledge-full, kgr:diseases.portal, kgr:diseases.textmining-filtered, kgr:diseases.textmining-full, kgr:spoke.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:translator.diseases.graph ; schema1:identifier "diseases" ; schema1:name "DISEASES" ; skos:altLabel "DISEASES Database", "JensenLab DISEASES" ; skos:inScheme "biomedical", "genomics", "health", "literature" ; adms:status "Active" ; foaf:homepage . kgr:disgenet a schema1:DataSource ; rdfs:label "DisGeNET" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DisGeNET is the world's largest and most extensive gene-disease association (GDA) network, integrating data from expert-curated repositories, GWAS catalogs, animal models, and scientific literature. It contains gene-disease associations, variant-disease associations, and disease-disease associations with extensive evidence supporting each connection." ; dcterms:identifier "disgenet" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:aop-db.data, kgr:bioteque.embeddings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:disgenet.api, kgr:disgenet.browser, kgr:disgenet.data, kgr:genecards.disease.associations, kgr:indra.cogex.code, kgr:pheknowlator.graph, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "disgenet" ; schema1:name "DisGeNET" ; skos:inScheme "biomedical", "clinical", "drug discovery", "genomics", "precision medicine", "translational" ; adms:status "Active" ; foaf:homepage . kgr:disprot a schema1:DataSource ; rdfs:label "DisProt" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DisProt is a manually curated database of experimentally validated intrinsically disordered proteins (IDPs) and intrinsically disordered regions (IDRs), providing annotations for structural disorder and functional aspects of protein disorder." ; dcterms:identifier "disprot" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:disprot.api, kgr:disprot.browser, kgr:disprot.deposition, kgr:disprot.downloads, kgr:disprot.idpo ; schema1:identifier "disprot" ; schema1:name "DisProt" ; skos:inScheme "biological systems", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:doaf a schema1:Ontology ; rdfs:label "Disease Ontology Annotation Framework" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Disease Ontology Annotation Framework (DOAF) was a semantic framework for representing and sharing disease annotations, enabling standardized disease ontology annotations across biomedical resources." ; dcterms:identifier "doaf" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:doaf.framework-publication ; schema1:identifier "doaf" ; schema1:name "Disease Ontology Annotation Framework" ; skos:altLabel "DOAF", "Disease Ontology Annotation Framework" ; skos:inScheme "biomedical", "clinical" ; adms:status "Inactive" ; foaf:homepage . kgr:docm a schema1:DataSource ; rdfs:label "Database of Curated Mutations" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DoCM (Database of Curated Mutations) was a highly curated database of known, disease-causing mutations in cancer, specifically focused on mutations with clinical or functional evidence. The project has been retired and succeeded by the Clinical Interpretation of Variants in Cancer (CIViC) knowledgebase. All DoCM data remains available in archived form." ; dcterms:identifier "docm" ; dcterms:license ; dcterms:modified "2025-01-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:docm.data.sql, kgr:docm.variants.tsv, kgr:docm.variants.vcf ; schema1:identifier "docm" ; schema1:name "Database of Curated Mutations" ; doap:repository ; skos:altLabel "DoCM" ; skos:inScheme "genomics", "health", "precision medicine" ; adms:status "Inactive" ; foaf:homepage . kgr:doco a schema1:Ontology ; rdfs:label "Document Components Ontology (DOCO)" ; dcterms:created "2025-12-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DOCO (Document Components Ontology) is an OWL ontology for describing the structural and rhetorical components of documents. It is part of the SPAR (Semantic Publishing and Referencing) Ontologies suite and provides a vocabulary for semantic annotation of document structure." ; dcterms:identifier "doco" ; dcterms:license ; dcterms:modified "2026-01-05T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:doco.owl, kgr:openbiodiv.ontology.ttl ; schema1:name "Document Components Ontology (DOCO)" ; doap:repository ; skos:inScheme "literature" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:spar . kgr:doid a schema1:Ontology ; rdfs:label "Human Disease Ontology" ; dcterms:description "An ontology for describing the classification of human diseases organized by etiology." ; dcterms:identifier "doid" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:biomarkerkg.nodes.condition, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:doid.obo, kgr:doid.owl, kgr:drug-approvals-kp.graph.edges, kgr:drug-approvals-kp.graph.nodes, kgr:efo.obo, kgr:efo.owl, kgr:ibkh.graph, kgr:mechreponet.kg, kgr:mondo.sssom, kgr:spoke.graph, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Human Disease Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:dorothea a schema1:KnowledgeGraph ; rdfs:label "DoRothEA" ; dcterms:created "2025-09-11T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DoRothEA is a curated resource of transcription factor (TF) – target gene (regulon) interactions with confidence scoring, enabling inference of TF activity from gene expression data. It integrates literature-curated interactions and various experimental evidence (e.g. ChIP-seq, TF binding motifs, perturbation data) to build context-agnostic and confidence-stratified regulons for multiple species. Frequently used with PROGENy to estimate pathway and TF activities." ; dcterms:identifier "dorothea" ; dcterms:isReferencedBy , ; dcterms:modified "2025-09-11T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bioteque.embeddings, kgr:dorothea.docs, kgr:dorothea.graph, kgr:dorothea.r-package ; schema1:name "DoRothEA" ; skos:inScheme "biological systems", "biomedical", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:dpo a schema1:Ontology ; rdfs:label "Drosophila Phenotype Ontology" ; dcterms:description "An ontology of commonly encountered and/or high level Drosophila phenotypes." ; dcterms:identifier "dpo" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:dpo.json, kgr:dpo.obo, kgr:dpo.owl ; schema1:name "Drosophila Phenotype Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:dreamkg a schema1:KnowledgeGraph ; rdfs:label "DREAM-KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DREAM-KG (Develop Dynamic, REsponsive, Adaptive, and Multifaceted Knowledge Graphs) is a knowledge graph designed to address homelessness with explainable AI, integrating data across social services and community resources." ; dcterms:identifier "dreamkg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:dreamkg.sparql ; schema1:name "DREAM-KG" ; skos:inScheme "health", "social determinants" ; adms:status "Active" ; foaf:homepage . kgr:drkg a schema1:KnowledgeGraph ; rdfs:label "Drug Repurposing Knowledge Graph" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Drug Repurposing Knowledge Graph (DRKG) is a comprehensive biological knowledge graph relating genes, compounds, diseases, biological processes, side effects and symptoms." ; dcterms:identifier "drkg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:drkg.graph, kgr:ibkh.graph ; schema1:name "Drug Repurposing Knowledge Graph" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:dron a schema1:Ontology ; rdfs:label "The Drug Ontology" ; dcterms:description "An ontology to support comparative effectiveness researchers studying claims data." ; dcterms:identifier "dron" ; dcterms:license ; schema1:hasPart kgr:dron.owl ; schema1:name "The Drug Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:drug-approvals-kp a schema1:KnowledgeGraph ; rdfs:label "Drug Approvals KP" ; dcterms:created "2025-04-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Translator knowledge provider focused on drug approval status and other drug-related metadata." ; dcterms:identifier "drug-approvals-kp" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:drug-approvals-kp.code, kgr:drug-approvals-kp.graph.edges, kgr:drug-approvals-kp.graph.nodes ; schema1:name "Drug Approvals KP" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "health", "pharmacology" ; adms:status "Active" . kgr:drugbank a schema1:DataSource ; rdfs:label "DrugBank" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DrugBank Online is a comprehensive, publicly accessible database containing detailed information on drugs and drug targets, combining chemical, pharmacological, pharmaceutical data with drug target information including sequence, structure, and pathway details." ; dcterms:identifier "drugbank" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:bioteque.embeddings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:drugbank.academic, kgr:drugbank.clinical.api, kgr:drugbank.web, kgr:drugmechdb.graph, kgr:genecards.pharmacogenomics, kgr:ibkh.graph, kgr:microbiomekg.api, kgr:pharmkg.graph, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:spoke.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "drugbank" ; schema1:name "DrugBank" ; doap:repository ; skos:inScheme "chemistry and biochemistry", "genomics", "health", "pharmacology", "proteomics" ; skos:related "biopragmatics", "core" ; adms:status "Active" ; foaf:homepage . kgr:drugcentral a schema1:DataSource ; rdfs:label "DrugCentral" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DrugCentral is online drug information resource created and maintained by Division of Translational Informatics at University of New Mexico." ; dcterms:identifier "drugcentral" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:automat.drugcentral, kgr:bioteque.embeddings, kgr:drugcentral.data, kgr:mind.entities, kgr:mind.relations, kgr:mind.test, kgr:mind.train, kgr:mind.valid, kgr:repodb.full_dataset, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:spoke.graph, kgr:translator.dakp.graph ; schema1:identifier "drugcentral" ; schema1:name "DrugCentral" ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:drugmechdb a schema1:KnowledgeGraph ; rdfs:label "DrugMechDB" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DrugMechDB is a curated database that captures mechanistic paths from a drug to a disease within a given indication. Expert curators normalize concepts and relationships to standard biomedical identifiers and represent each indication as a directed path through a biological knowledge graph, suitable for computational analysis and benchmarking." ; dcterms:identifier "drugmechdb" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:drugmechdb.graph, kgr:drugmechdb.web ; schema1:identifier "drugmechdb" ; schema1:name "DrugMechDB" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "literature", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:drugrephub a schema1:DataSource ; rdfs:label "Drug Repurposing Hub" ; dcterms:created "2026-01-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Curated collection of approved, clinical, and pre-clinical compounds with detailed annotations and sample metadata to support drug repurposing screens and analyses." ; dcterms:identifier "drugrephub" ; dcterms:modified "2026-01-22T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:drugrephub.drug-info.tsv, kgr:drugrephub.sample-info.tsv, kgr:translator.drug_rep_hub.graph ; schema1:name "Drug Repurposing Hub" ; skos:inScheme "biomedical", "drug discovery", "pharmacology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:broad-cdot, kgr:broad-institute . kgr:dsstox a schema1:DataSource ; rdfs:label "DSSTox" ; dcterms:created "2025-06-24T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "EPA's Distributed Structure-Searchable Toxicity (DSSTox) Database contains curated chemical substances mapped to data including chemical identifiers and structure representations, providing the chemical underpinning for EPA's computational toxicology tools." ; dcterms:identifier "dsstox" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:dsstox.api, kgr:dsstox.complete, kgr:dsstox.dashboard, kgr:dsstox.description ; schema1:name "DSSTox" ; skos:inScheme "biomedical", "chemistry and biochemistry", "environment", "health" ; adms:status "Active" ; foaf:homepage . kgr:dsstoxdb a schema1:DataSource ; rdfs:label "Distributed Structure-Searchable Toxicity (DSSTox) Database" ; dcterms:created "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "EPA's Distributed Structure-Searchable Toxicity (DSSTox) database provides high-quality chemical and chemistry data underpinning several publicly available computational toxicology applications. DSSTox contains curated chemical substances mapped to chemical identifiers including CAS Registry Numbers, IUPAC names, SMILES, and InChIKeys. The database currently exceeds 1.2 million substances which includes chemical lists of interest to EPA, other federal agencies, states, tribes, industry and stakeholder groups. DSSTox provides accurate linkages of chemical structures to source substance identifiers, allowing high-quality association of chemicals to existing toxicity data, bioactivity data, experimental chemical property data and enabling structure-based predictive modeling. The database supports the CompTox Chemicals Dashboard, EcoTox Knowledgebase, Chemical Exposure Knowledgebase, and other EPA tools." ; dcterms:identifier "dsstoxdb" ; dcterms:license ; dcterms:modified "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:dsstoxdb.api, kgr:dsstoxdb.dashboard, kgr:dsstoxdb.downloads ; schema1:identifier "dsstoxdb" ; schema1:name "Distributed Structure-Searchable Toxicity (DSSTox) Database" ; skos:inScheme "chemistry and biochemistry", "environment", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:duo a schema1:Ontology ; rdfs:label "Data Use Ontology" ; dcterms:description "DUO is an ontology which represent data use conditions." ; dcterms:identifier "duo" ; dcterms:license ; schema1:hasPart kgr:duo.owl ; schema1:name "Data Use Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:ebrains a schema1:KnowledgeGraph ; rdfs:label "EBRAINS Knowledge Graph" ; dcterms:created "2025-05-01T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge graph for the EBRAINS project, an infrastructure for data, tools and computing facilities for brain-related research." ; dcterms:identifier "ebrains" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ebrains.api.core, kgr:ebrains.stats ; schema1:name "EBRAINS Knowledge Graph" ; doap:repository ; skos:inScheme "biomedical", "health", "neuroscience" ; adms:status "Active" ; foaf:homepage . kgr:ec a schema1:Ontology ; rdfs:label "Enzyme Commission" ; dcterms:created "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Enzyme Commission classification system provides a hierarchical numbering scheme for enzymes based on the chemical reactions they catalyze, maintained by the IUBMB." ; dcterms:identifier "ec" ; dcterms:license ; dcterms:modified "2026-01-05T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ec.database, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw ; schema1:name "Enzyme Commission" ; skos:altLabel "EC", "EC Numbers", "Enzyme Commission Numbers", "IUBMB Enzyme Nomenclature" ; skos:inScheme "biological systems", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:iubmb . kgr:ecao a schema1:Ontology ; rdfs:label "The Echinoderm Anatomy and Development Ontology" ; dcterms:description "An ontology for the development and anatomy of the different species of the phylum Echinodermata (NCBITaxon:7586)." ; dcterms:identifier "ecao" ; dcterms:license ; schema1:hasPart kgr:ecao.obo, kgr:ecao.owl ; schema1:name "The Echinoderm Anatomy and Development Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:ecid a schema1:DataSource ; rdfs:label "ECID" ; dcterms:created "2025-05-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ECID is a biomedical knowledgebase of curated inter-chemical correlations from the core chemical datasets in exposomics. These datasets are prioritized from human biomonitoring studies using targeted and untargeted assays. ECID has applications in characterizing and understanding the effects of exposome chemicals on the human health." ; dcterms:identifier "ecid" ; dcterms:isReferencedBy ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:ecid.bloodexposome.data, kgr:ecid.ccdb.site, kgr:ecid.compound.lists, kgr:ecid.dataset.list, kgr:ecid.echo.analyte.list, kgr:ecid.edir.site, kgr:ecid.hhear.analyte.list, kgr:ecid.metabolomics.data.dictionary, kgr:ecid.metabolomics.workbench.dictionary, kgr:ecid.nhanes.analyte.list ; schema1:name "ECID" ; doap:repository ; skos:inScheme "biomedical", "chemistry and biochemistry", "environment", "health", "public health", "social determinants" ; adms:status "Active" ; foaf:homepage . kgr:eco a schema1:Ontology ; rdfs:label "Evidence and Conclusion Ontology" ; dcterms:description "An ontology for experimental and other evidence statements." ; dcterms:identifier "eco" ; dcterms:license ; schema1:hasPart kgr:eco.obo, kgr:eco.owl, kgr:swisslipid.evidences ; schema1:name "Evidence and Conclusion Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:eco-kg a schema1:KnowledgeGraph ; rdfs:label "eco-KG" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge graph of plant traits starting with Planteome and EOL TraitBank." ; dcterms:identifier "eco-kg" ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:eco-kg.api, kgr:eco-kg.graph ; schema1:name "eco-KG" ; doap:repository ; skos:inScheme "biological systems", "environment", "organisms" ; skos:related "core" ; adms:status "Active" ; foaf:homepage . kgr:ecocore a schema1:Ontology ; rdfs:label "An ontology of core ecological entities" ; dcterms:description "Ecocore is a community ontology for the concise and controlled description of ecological traits of organisms." ; dcterms:identifier "ecocore" ; dcterms:license ; schema1:hasPart kgr:ecocore.obo, kgr:ecocore.owl ; schema1:name "An ontology of core ecological entities" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:ecocyc a schema1:DataSource ; rdfs:label "EcoCyc" ; dcterms:created "2025-03-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "EcoCyc captures information from 44,000 publications for Escherichia coli K-12 substr. MG1655. Use EcoCyc to search for knowledge on E. coli genes, regulation, and metabolism; analyze transcriptomics data; perform comparative analyses; and run a metabolic model." ; dcterms:identifier "ecocyc" ; dcterms:license ; dcterms:modified "2025-09-27T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ecocyc.api, kgr:ecocyc.metabolic_model, kgr:ecocyc.web, kgr:obo-db-ingest.rhea.sssom.tsv ; schema1:name "EcoCyc" ; doap:repository ; skos:inScheme "biological systems", "genomics", "microbiology", "pathways" ; adms:status "Active" ; foaf:homepage . kgr:ecosim a schema1:Resource ; rdfs:label "ecosim" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Ontology rendering of the EcoSIM Land System Model" ; dcterms:identifier "ecosim" ; dcterms:modified "2025-09-27T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ecosim.model.owl ; schema1:name "ecosim" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:ecto a schema1:Ontology ; rdfs:label "Environmental conditions, treatments and exposures ontology" ; dcterms:description "ECTO describes exposures to experimental treatments of plants and model organisms (e.g. exposures to modification of diet, lighting levels, temperature); exposures of humans or any other organisms to stressors through a variety of routes, for purposes of public health, environmental monitoring etc, stimuli, natural and experimental, any kind of environmental condition or change in condition that can be experienced by an organism or population of organisms on earth. The scope is very general and can include for example plant treatment regimens, as well as human clinical exposures (although these may better be handled by a more specialized ontology)." ; dcterms:identifier "ecto" ; dcterms:license ; schema1:hasPart kgr:ecto.ecto-base.json, kgr:ecto.ecto-base.obo, kgr:ecto.ecto-base.owl, kgr:ecto.json, kgr:ecto.obo, kgr:ecto.owl, kgr:efo.obo, kgr:efo.owl ; schema1:name "Environmental conditions, treatments and exposures ontology" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:edam a schema1:Ontology ; rdfs:label "EDAM Ontology" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "EDAM is an ontology of bioscientific data analysis and data management, covering topics, operations, data, identifiers, and formats. It supports semantic annotation of tools, workflows, training, and provenance metadata across life sciences." ; dcterms:identifier "edam" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:edam.csv, kgr:edam.owl, kgr:edam.tsv, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "EDAM Ontology" ; doap:repository ; skos:inScheme "biological systems", "information technology" ; adms:status "Active" ; foaf:homepage . kgr:efo a schema1:Ontology ; rdfs:label "Experimental Factor Ontology" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Experimental Factor Ontology (EFO) provides a systematic description of many experimental variables available in EBI databases, and for projects such as the GWAS catalog. It combines parts of several biological ontologies, such as UBERON anatomy, ChEBI chemical compounds, and Cell Ontology." ; dcterms:identifier "efo" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:clo.owl, kgr:efo.obo, kgr:efo.ols, kgr:efo.owl, kgr:epigraphdb.graph, kgr:microbiomekg.api, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "efo" ; schema1:name "Experimental Factor Ontology" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "health", "phenotype" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:eggnog a schema1:DataSource ; rdfs:label "eggNOG" ; dcterms:created "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A database of orthologous groups and functional annotations derived from comparative genomics, supporting cross-species gene function inference." ; dcterms:identifier "eggnog" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:eggnog.download, kgr:eggnog.download.e7.clu2ogs, kgr:eggnog.download.e7.og-fasta-sequences, kgr:eggnog.download.e7.og-info-kegg-go, kgr:eggnog.download.e7.protein-families, kgr:eggnog.download.e7.proteins, kgr:eggnog.download.e7.taxid-info, kgr:eggnog.download.e7.trees, kgr:eggnog.portal, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "eggNOG" ; skos:altLabel "Evolutionary Genealogy of Genes: Non-supervised Orthologous Groups", "eggNOG" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:ehda a schema1:Ontology ; rdfs:label "Human developmental anatomy, timed version" ; dcterms:description "Description unavailable." ; dcterms:identifier "ehda" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Human developmental anatomy, timed version" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:ehdaa a schema1:Ontology ; rdfs:label "Human developmental anatomy, abstract version" ; dcterms:description "Description unavailable." ; dcterms:identifier "ehdaa" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Human developmental anatomy, abstract version" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" . kgr:ehdaa2 a schema1:Ontology ; rdfs:label "Human developmental anatomy, abstract" ; dcterms:description "A structured controlled vocabulary of stage-specific anatomical structures of the developing human." ; dcterms:identifier "ehdaa2" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:ehdaa2.obo, kgr:ehdaa2.owl ; schema1:name "Human developmental anatomy, abstract" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:emap a schema1:Ontology ; rdfs:label "Mouse gross anatomy and development, timed" ; dcterms:description "A structured controlled vocabulary of stage-specific anatomical structures of the mouse (Mus)." ; dcterms:identifier "emap" ; dcterms:license "Not specified" ; schema1:about ; schema1:hasPart kgr:emap.owl ; schema1:name "Mouse gross anatomy and development, timed" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:emapa a schema1:Ontology ; rdfs:label "Mouse Developmental Anatomy Ontology" ; dcterms:description "An ontology for mouse anatomy covering embryonic development and postnatal stages." ; dcterms:identifier "emapa" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:emapa.obo, kgr:emapa.owl ; schema1:name "Mouse Developmental Anatomy Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:embiology a schema1:KnowledgeGraph ; rdfs:label "EmBiology" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "EmBiology is a commercial, web-based knowledge graph platform from Elsevier that surfaces biological relationships across entities such as genes, proteins, diseases, cells, and more. EmBiology connects 1.4 million entities via 15.7 million relationships and provides 87.2 million referenced facts (figures reported by Elsevier), with weekly updates and annual rescans of the corpus. It uses NLP (including the TERMite engine) and expert curation to extract and quality-control relationships from full-text scientific literature and other sources, and offers interactive visualization (e.g., Sankey diagrams) and filtering to support discovery and decision-making in drug research and biology." ; dcterms:identifier "embiology" ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:embiology.web ; schema1:name "EmBiology" ; skos:inScheme "biomedical", "drug discovery", "health", "literature" ; adms:status "Active" ; foaf:homepage . kgr:emi a schema1:Ontology ; rdfs:label "Earth Metabolome Initiative Ontology" ; dcterms:created "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Earth Metabolome Initiative (EMI) Ontology provides classes and properties for metabolites, taxonomy, traits, interactions, and associated metadata used to build METRIN-KG." ; dcterms:identifier "emi" ; dcterms:license ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:emi.ttl, kgr:emikg.kg, kgr:emikg.sparql, kgr:emikg.web ; schema1:identifier "emi" ; schema1:name "Earth Metabolome Initiative Ontology" ; doap:repository ; skos:inScheme "biological systems", "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:emikg a schema1:KnowledgeGraph ; rdfs:label "EMI KG" ; dcterms:created "2025-05-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge graph version of the Earth Metabolome Initiative (EMI) Ontology, containing over 413 million triples derived from metabolomic datasets. It provides a structured representation of metabolomic data within a semantic framework." ; dcterms:identifier "emikg" ; dcterms:license ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:emikg.kg, kgr:emikg.sparql, kgr:emikg.web ; schema1:name "EMI KG" ; skos:inScheme "biological systems", "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:ena a schema1:DataSource ; rdfs:label "European Nucleotide Archive (ENA)" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The European Nucleotide Archive (ENA) is a comprehensive database providing free and open access to nucleotide sequence data, functional genomics data, and associated metadata. It is operated by EMBL-EBI and serves as an ELIXIR Core Data Resource and a Global Core Biodata Resource." ; dcterms:identifier "ena" ; dcterms:modified "2025-10-10T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ena.api, kgr:ena.browser, kgr:ena.datahubs, kgr:ena.docs, kgr:ena.ftp, kgr:ena.training, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "European Nucleotide Archive (ENA)" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" . kgr:enrichr-kg a schema1:KnowledgeGraph ; rdfs:label "Enrichr-KG" ; dcterms:created "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Enrichr-KG is a comprehensive knowledge graph that integrates gene set enrichment analysis libraries from Enrichr, connecting genes to biological terms, pathways, diseases, drugs, and other functional annotations across multiple domains and species to enable multi-layered biological discovery and hypothesis generation." ; dcterms:identifier "enrichr-kg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:enrichr-kg.api, kgr:enrichr-kg.graph, kgr:enrichr-kg.portal ; schema1:name "Enrichr-KG" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "drug discovery", "genomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:ensembl a schema1:DataSource ; rdfs:label "Ensembl" ; dcterms:created "2025-05-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A genome browser for vertebrate genomes that supports research in comparative genomics, evolution, sequence variation, and transcriptional regulation" ; dcterms:identifier "ensembl" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , , , ; schema1:hasPart kgr:aop-db.data, kgr:ensembl.api.perl, kgr:ensembl.api.rest, kgr:ensembl.biomart, kgr:ensembl.blast, kgr:ensembl.browser, kgr:ensembl.vep, kgr:epigraphdb.graph, kgr:genecards.gene.annotations, kgr:ncbigene.gene2ensembl, kgr:omim.mim2gene, kgr:pheknowlator.graph, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:identifier "ensembl-gene" ; schema1:name "Ensembl" ; doap:repository ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:entrez a schema1:Aggregator ; rdfs:label "Entrez" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Entrez is NCBI's primary text search and retrieval system that integrates multiple biological databases including PubMed, GenBank, Gene, Protein, and many others. It provides a unified query interface and retrieval mechanism across NCBI's vast collection of biomedical and genomic data resources, enabling researchers to search and access information from disparate databases using a single query system." ; dcterms:identifier "entrez" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:entrez.edirect, kgr:entrez.eutils, kgr:entrez.web ; schema1:identifier "entrez" ; schema1:name "Entrez" ; skos:altLabel "Entrez", "NCBI Entrez", "NCBIGene" ; skos:inScheme "biomedical", "literature" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:envo a schema1:Ontology ; rdfs:label "Environment Ontology" ; dcterms:description "An ontology of environmental systems, components, and processes." ; dcterms:identifier "envo" ; dcterms:license ; schema1:hasPart kgr:envo.json, kgr:envo.obo, kgr:envo.owl, kgr:envo.subsets.EnvO-Lite-GSC.obo, kgr:envo.subsets.envo-basic.obo, kgr:envo.subsets.envoEmpo.owl, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw ; schema1:name "Environment Ontology" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:eo a schema1:Ontology ; rdfs:label "Plant Environment Ontology" ; dcterms:description "A structured, controlled vocabulary which describes the treatments, growing conditions, and/or study types used in plant biology experiments." ; dcterms:identifier "eo" ; dcterms:license ; schema1:hasPart kgr:eo.obo, kgr:eo.owl ; schema1:name "Plant Environment Ontology" ; doap:repository ; skos:inScheme "environment" ; adms:status "Inactive" ; foaf:homepage . kgr:eol-traitbank a schema1:DataSource ; rdfs:label "Encyclopedia of Life (EOL) TraitBank" ; dcterms:created "2025-12-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Encyclopedia of Life (EOL) TraitBank is a searchable, comprehensive, open digital repository for organism traits, measurements, interactions, and other attributes aggregated from 50+ data sources. It covers 1.7 million taxa across the entire tree of life with 11 million+ trait records organized using semantic web standards and Darwin Core terminology." ; dcterms:identifier "eol-traitbank" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:eol-traitbank.api, kgr:eol-traitbank.bulk-csv, kgr:eol-traitbank.cypher, kgr:eol-traitbank.docs, kgr:eol-traitbank.reconciliation, kgr:eol-traitbank.web ; schema1:identifier "eol-traitbank" ; schema1:name "Encyclopedia of Life (EOL) TraitBank" ; doap:repository ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:smithsonian-nmnh . kgr:epigraphdb a schema1:KnowledgeGraph ; rdfs:label "EpiGraphDB" ; dcterms:created "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "EpiGraphDB is an analytical platform and graph database for health data science that integrates Mendelian randomization causal estimates across a wide range of phenotypes with diverse bioinformatic and epidemiological resources. It supports systematic causal inference, data mining, and exploration through a web application, API, R package, and curated graph knowledge base." ; dcterms:identifier "epigraphdb" ; dcterms:license ; dcterms:modified "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:epigraphdb.api, kgr:epigraphdb.docs, kgr:epigraphdb.examples, kgr:epigraphdb.graph, kgr:epigraphdb.rpackage, kgr:epigraphdb.web ; schema1:name "EpiGraphDB" ; skos:inScheme "biomedical", "genomics", "health", "investigations" ; adms:status "Active" ; foaf:homepage . kgr:epio a schema1:Ontology ; rdfs:label "Epilepsy Ontology" ; dcterms:description "A application driven Epilepsy Ontology with official terms from the ILAE." ; dcterms:identifier "epio" ; dcterms:license ; schema1:hasPart kgr:epio.EPIO_merged.owl, kgr:epio.owl ; schema1:name "Epilepsy Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:epo a schema1:Ontology ; rdfs:label "Epidemiology Ontology" ; dcterms:description "An ontology designed to support the semantic annotation of epidemiology resources" ; dcterms:identifier "epo" ; dcterms:license "Not specified" ; schema1:hasPart kgr:epo.owl ; schema1:name "Epidemiology Ontology" ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:epsd a schema1:DataSource ; rdfs:label "Eukaryotic Phosphorylation Site Database 2.0" ; dcterms:created "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "EPSD (Eukaryotic Phosphorylation Site Database) is a comprehensive database that curates and annotates experimentally identified protein phosphorylation sites across eukaryotic species. Version 2.0 contains 2,769,163 phosphorylation sites in 362,707 phosphoproteins from 223 eukaryotic species (95 animals, 20 protists, 61 plants, 48 fungi). The database integrates data from high-throughput phosphoproteomic studies and 10 public databases, providing detailed annotations including phosphopeptide sequences, localization probability scores, cell/tissue sources, and primary references. EPSD 2.0 features 88,074 functional annotations for 32,762 phosphorylation sites, covering 58 types of downstream effects on phosphoproteins and 107 regulatory impacts on biological processes. For eight model organisms (human, mouse, rat, Drosophila, C. elegans, Arabidopsis, S. pombe, S. cerevisiae), phosphoproteins are meticulously annotated with information from 100 external resources across 15 aspects including kinase/phosphatase regulators, 3D structures, physicochemical characteristics, genomic variations, functional descriptions, protein domains, molecular interactions, drug-target associations, disease data, orthologs, transcript expression, proteomics, subcellular localization, and regulatory pathways. EPSD 2.0 represents a 2.5-fold increase in data volume compared to version 1.0 and provides intrinsic disorder propensity and surface accessibility calculations for phosphorylation sites. The database supports advanced search options including substrate search, peptide search, batch search, BLAST search, and browse by species functionality." ; dcterms:identifier "epsd" ; dcterms:isReferencedBy , ; dcterms:modified "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , , , , , , ; schema1:hasPart kgr:epsd.browse, kgr:epsd.download, kgr:epsd.portal, kgr:epsd.search, kgr:kinace.portal ; schema1:identifier "epsd" ; schema1:name "Eukaryotic Phosphorylation Site Database 2.0" ; skos:altLabel "EPSD", "EPSD 2.0", "Eukaryotic phosphorylation site database" ; skos:inScheme "genomics", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:eqtlgen a schema1:DataSource ; rdfs:label "eQTLGen Consortium" ; dcterms:created "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The eQTLGen Consortium conducts large-scale meta-analyses of expression quantitative trait loci (eQTLs) in blood samples to investigate the genetic architecture of gene expression and understand the genetic underpinnings of complex traits. Phase I analyzed 31,684 blood and PBMC samples from 37 cohorts, identifying thousands of cis-eQTLs, trans-eQTLs, and expression quantitative trait score (eQTS) associations. The consortium also includes a single-cell eQTLGen project. Phase II is expanding to genome-wide eQTL meta-analysis across even more blood-based cohorts. The resulting summary statistics provide a valuable resource for interpreting genome-wide association studies (GWAS), developing novel methods, and understanding molecular mechanisms of complex traits." ; dcterms:identifier "eqtlgen" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-21T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:epigraphdb.graph, kgr:eqtlgen.allele_frequencies, kgr:eqtlgen.cis_eqtl_full, kgr:eqtlgen.cis_eqtl_significant, kgr:eqtlgen.cis_eqtl_smr, kgr:eqtlgen.phase1_browser, kgr:eqtlgen.phase2_cookbook, kgr:eqtlgen.sc_website, kgr:eqtlgen.trans_eqtl_full, kgr:eqtlgen.trans_eqtl_significant ; schema1:name "eQTLGen Consortium" ; doap:repository ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:eram a schema1:DataSource ; rdfs:label "eRAM: encyclopedia of rare disease annotations for precision medicine" ; dcterms:created "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The encyclopedia of Rare disease Annotation for Precision Medicine (eRAM) is a standardized system providing computational annotations for rare diseases to support precision medicine. eRAM provides annotations for approximately 16,000 rare diseases, including detailed information on clinical phenotypes, symptoms, genes, and genotypes. The database contains over 6,100 human disease-related phenotype terms, 31,600 mammalian phenotype terms, 10,200 symptoms from UMLS, 18,800 genes and 92,500 genotypes. eRAM organizes diseases in a tree structure to systematically display relationships between diseases with similar pathogenesis, close anatomical sites, the same clinical symptoms or subtypes, facilitating both research into rare disease mechanisms and clinical diagnosis and treatment decisions." ; dcterms:identifier "eram" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:eram.downloads, kgr:eram.web ; schema1:identifier "eram" ; schema1:name "eRAM: encyclopedia of rare disease annotations for precision medicine" ; skos:altLabel "eRAM" ; skos:inScheme "clinical", "health", "phenotype", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:erccrbp a schema1:DataSource ; rdfs:label "ERCC RNA Binding Protein Dataset" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ERCC RNA Binding Protein dataset (ERCCRBP) is a collection of data focused on RNA binding proteins involved in extracellular RNA functions as part of the NIH Common Fund's Extracellular RNA Communication Consortium (ERCC) program. This dataset provides insights into the protein-RNA interactions important for exRNA stability, transport, and signaling." ; dcterms:identifier "erccrbp" ; dcterms:license ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "ERCC RNA Binding Protein Dataset" ; skos:inScheme "biomedical", "chemistry and biochemistry", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:erccreg a schema1:DataSource ; rdfs:label "ERCC Regulatory Element Dataset" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ERCC Regulatory Element dataset (erccreg) is a collection of data related to regulatory elements of extracellular RNA as part of the NIH Common Fund's Extracellular RNA Communication Consortium (ERCC) program. This dataset focuses on RNA-based regulatory mechanisms involved in extracellular communication." ; dcterms:identifier "erccreg" ; dcterms:license ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "ERCC Regulatory Element Dataset" ; skos:inScheme "biomedical", "chemistry and biochemistry", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:ero a schema1:Ontology ; rdfs:label "eagle-i resource ontology" ; dcterms:description "An ontology of research resources such as instruments. protocols, reagents, animal models and biospecimens." ; dcterms:identifier "ero" ; dcterms:license ; schema1:hasPart kgr:ero.owl ; schema1:name "eagle-i resource ontology" ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:eupath a schema1:Ontology ; rdfs:label "VEuPathDB ontology" ; dcterms:description "An ontology is developed to support Eukaryotic Pathogen, Host & Vector Genomics Resource (VEuPathDB; https://veupathdb.org)." ; dcterms:identifier "eupath" ; dcterms:license ; schema1:hasPart kgr:eupath.owl ; schema1:name "VEuPathDB ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:eupathdb a schema1:DataSource ; rdfs:label "Eukaryotic Pathogen Database (EuPathDB)" ; dcterms:created "2025-08-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Eukaryotic Pathogen Database (EuPathDB) is an integrated genomics database covering numerous eukaryotic pathogens including Plasmodium, Trypanosoma, and other parasites. It provides functional genomics resources integrating data from human and veterinary parasites, now known as VEuPathDB (Vectorbase and EuPathDB)." ; dcterms:identifier "eupathdb" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:eupathdb.api, kgr:eupathdb.apollo, kgr:eupathdb.docs, kgr:eupathdb.downloads, kgr:eupathdb.mapveu, kgr:eupathdb.portal, kgr:microbiomekg.api ; schema1:name "Eukaryotic Pathogen Database (EuPathDB)" ; skos:inScheme "biological systems", "genomics", "organisms" ; adms:status "Active" . kgr:ev a schema1:Ontology ; rdfs:label "eVOC (Expressed Sequence Annotation for Humans)" ; dcterms:description "Description unavailable." ; dcterms:identifier "ev" ; dcterms:license "Not specified" ; schema1:name "eVOC (Expressed Sequence Annotation for Humans)" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" . kgr:evlncrnas a schema1:DataSource ; rdfs:label "EVLncRNAs" ; dcterms:created "2018-01-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "EVLncRNAs is a comprehensive database of experimentally validated functional long non-coding RNAs (lncRNAs) curated manually from low-throughput experimental studies. The database covers functional lncRNAs from 162 species, including disease associations, biological functions, interaction partners, structures, circular RNAs, exosomal lncRNAs, peptide-coding lncRNAs, and resistant lncRNAs. EVLncRNAs provides functional classifications based on Gene Ontology categories (biological processes, cellular components, molecular functions, and clinical applications), detailed interaction pathways, and integration with homologous lncRNAs, subcellular localization, phase separation, COVID-19, and organoid-related data." ; dcterms:identifier "evlncrnas" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-21T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:evlncrnas.circrnas, kgr:evlncrnas.diseases, kgr:evlncrnas.download, kgr:evlncrnas.exosomal, kgr:evlncrnas.help, kgr:evlncrnas.interactions, kgr:evlncrnas.peptide, kgr:evlncrnas.portal, kgr:evlncrnas.resistant, kgr:evlncrnas.species, kgr:evlncrnas.structures, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "EVLncRNAs" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:exmo a schema1:Ontology ; rdfs:label "Exercise Medicine Ontology" ; dcterms:description "A core reference ontology built upon BFO about exercise medicine and it contains the related terms for healthy people, people with chronic conditions and people living with diability to exercise." ; dcterms:identifier "exmo" ; dcterms:license ; schema1:hasPart kgr:exmo.owl ; schema1:name "Exercise Medicine Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:exo a schema1:Ontology ; rdfs:label "Exposure ontology" ; dcterms:description "Vocabularies for describing exposure data to inform understanding of environmental health." ; dcterms:identifier "exo" ; dcterms:license ; schema1:hasPart kgr:exo.obo, kgr:exo.owl ; schema1:name "Exposure ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:expressionatlas a schema1:Aggregator ; rdfs:label "Expression Atlas" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Expression Atlas is EMBL-EBI's open science resource that provides information about gene and protein expression across species and biological conditions. It aggregates, processes, and visualizes gene expression data from thousands of manually curated experiments spanning multiple species, tissue types, developmental stages, diseases, and experimental perturbations. Both bulk RNA-sequencing and single-cell RNA-sequencing datasets are supported, offering baseline expression profiles and differential gene expression analysis results through standardized processing pipelines." ; dcterms:identifier "expressionatlas" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:expressionatlas.api, kgr:expressionatlas.baseline-summary, kgr:expressionatlas.differential-results, kgr:expressionatlas.documentation, kgr:expressionatlas.experiment-downloads, kgr:expressionatlas.ftp-bulk, kgr:expressionatlas.portal, kgr:expressionatlas.r-objects, kgr:expressionatlas.single-cell, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "Expression Atlas" ; doap:repository ; skos:inScheme "biological systems", "genomics", "organisms" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:fabio a schema1:Ontology ; rdfs:label "FABIO" ; dcterms:created "2025-12-11T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "FABIO (Functional Requirements for Bibliographic Records Object) is a comprehensive ontology for describing bibliographic resources and their properties. It extends the FRBR (Functional Requirements for Bibliographic Records) model into a machine-readable ontology format, enabling semantic representation of bibliographic entities, relationships, and metadata. FABIO supports the organization and discovery of scholarly works and publication resources across knowledge systems." ; dcterms:identifier "fabio" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:fabio.documentation, kgr:fabio.ttl, kgr:forum.graph.dump, kgr:openbiodiv.ontology.ttl ; schema1:name "FABIO" ; doap:repository ; skos:inScheme "general", "literature" ; adms:status "Active" ; foaf:homepage . kgr:faers a schema1:DataSource ; rdfs:label "FDA Adverse Event Reporting System" ; dcterms:created "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The FDA Adverse Event Reporting System (FAERS) is a database that contains adverse event reports, medication error reports, and product quality complaints resulting in adverse events submitted to the FDA. FAERS supports the FDA's post-marketing safety surveillance program for drug and therapeutic biologic products. The database adheres to ICH E2B international safety reporting guidance, and adverse events are coded using MedDRA (Medical Dictionary for Regulatory Activities) terminology. FAERS provides quarterly data files in ASCII and XML formats dating back to 2012, with archives available for earlier data." ; dcterms:identifier "faers" ; dcterms:modified "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:aeolus.standardized_data, kgr:faers.electronic_submissions, kgr:faers.faq, kgr:faers.public_dashboard, kgr:faers.quarterly_data_ascii, kgr:faers.quarterly_data_xml ; schema1:identifier "faers" ; schema1:name "FDA Adverse Event Reporting System" ; skos:inScheme "clinical", "drug discovery", "pharmacology", "public health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:fda . kgr:faldo a schema1:Ontology ; rdfs:label "FALDO" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "FALDO (Feature Annotation Location Description Ontology) is an ontology for describing sequence feature locations using RDF/OWL. It provides a standardized way to represent genomic and protein sequence positions, regions, and strands in Semantic Web formats." ; dcterms:identifier "faldo" ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:faldo.browser, kgr:faldo.rdf, kgr:faldo.ttl, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "FALDO" ; doap:repository ; skos:altLabel "Feature Annotation Location Description Ontology" ; skos:inScheme "biological systems", "genomics", "information technology" ; adms:status "Active" ; foaf:homepage . kgr:fao a schema1:Ontology ; rdfs:label "Fungal gross anatomy" ; dcterms:description "A structured controlled vocabulary for the anatomy of fungi." ; dcterms:identifier "fao" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:fao.obo, kgr:fao.owl ; schema1:name "Fungal gross anatomy" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:fbbi a schema1:Ontology ; rdfs:label "Biological Imaging Methods Ontology" ; dcterms:description "A structured controlled vocabulary of sample preparation, visualization and imaging methods used in biomedical research." ; dcterms:identifier "fbbi" ; dcterms:license ; schema1:hasPart kgr:fbbi.owl ; schema1:name "Biological Imaging Methods Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:fbbt a schema1:Ontology ; rdfs:label "Drosophila gross anatomy" ; dcterms:description "An ontology representing the gross anatomy of Drosophila melanogaster." ; dcterms:identifier "fbbt" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:fbbt.fbbt-simple.obo, kgr:fbbt.fbbt-simple.owl, kgr:fbbt.json, kgr:fbbt.obo, kgr:fbbt.owl ; schema1:name "Drosophila gross anatomy" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:fbcv a schema1:Ontology ; rdfs:label "FlyBase Controlled Vocabulary" ; dcterms:description "A structured controlled vocabulary used for various aspects of annotation by FlyBase." ; dcterms:identifier "fbcv" ; dcterms:license ; schema1:hasPart kgr:fbcv.json, kgr:fbcv.obo, kgr:fbcv.owl ; schema1:name "FlyBase Controlled Vocabulary" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:fbdv a schema1:Ontology ; rdfs:label "Drosophila development" ; dcterms:description "A structured controlled vocabulary of the development of Drosophila melanogaster." ; dcterms:identifier "fbdv" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:fbdv.fbdv-simple.obo, kgr:fbdv.fbdv-simple.owl, kgr:fbdv.json, kgr:fbdv.obo, kgr:fbdv.owl ; schema1:name "Drosophila development" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:fbsp a schema1:Ontology ; rdfs:label "Fly taxonomy" ; dcterms:description "The taxonomy of the family Drosophilidae (largely after Baechli) and of other taxa referred to in FlyBase." ; dcterms:identifier "fbsp" ; dcterms:license "Not specified" ; schema1:about ; schema1:hasPart kgr:fbsp.owl ; schema1:name "Fly taxonomy" ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:fideo a schema1:Ontology ; rdfs:label "Food Interactions with Drugs Evidence Ontology" ; dcterms:description "Food-Drug interactions automatically extracted from scientific literature" ; dcterms:identifier "fideo" ; dcterms:license ; schema1:hasPart kgr:fideo.owl ; schema1:name "Food Interactions with Drugs Evidence Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:finngen a schema1:DataSource ; rdfs:label "FinnGen" ; dcterms:created "2025-06-27T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "FinnGen is a large-scale genomics research project aimed at improving human health through genetic insights from the genetically unique Finnish population, combining genome information with digital health record data from 500,000 Finnish biobank participants." ; dcterms:identifier "finngen" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:disgenet.data, kgr:finngen.endpoints, kgr:finngen.meta_analysis, kgr:finngen.risteys, kgr:finngen.summary_stats ; schema1:name "FinnGen" ; skos:inScheme "biomedical", "clinical", "genomics", "health", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:fiokg a schema1:KnowledgeGraph ; rdfs:label "SAWGraph FIO KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The FIO KG is part of the SAWGraph (Safe Agricultural Products and Water Graph) project, providing structured data about food industry operations and their environmental impacts." ; dcterms:identifier "fiokg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:fiokg.sparql ; schema1:name "SAWGraph FIO KG" ; skos:inScheme "agriculture", "environment" ; adms:status "Active" ; foaf:homepage . kgr:fix a schema1:Ontology ; rdfs:label "Physico-chemical methods and properties" ; dcterms:description "An ontology of physico-chemical methods and properties." ; dcterms:identifier "fix" ; dcterms:license "Not specified" ; schema1:hasPart kgr:fix.obo, kgr:fix.owl ; schema1:name "Physico-chemical methods and properties" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Orphaned" ; foaf:homepage . kgr:flopo a schema1:Ontology ; rdfs:label "Flora Phenotype Ontology" ; dcterms:description "Traits and phenotypes of flowering plants occurring in digitized Floras" ; dcterms:identifier "flopo" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:flopo.owl ; schema1:name "Flora Phenotype Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:flu a schema1:Ontology ; rdfs:label "Influenza Ontology" ; dcterms:description "Description unavailable." ; dcterms:identifier "flu" ; dcterms:license "Not specified" ; schema1:hasPart kgr:flu.owl ; schema1:name "Influenza Ontology" ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:flybase a schema1:DataSource ; rdfs:label "FlyBase" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "FlyBase is a comprehensive database of genomic and genetic data for Drosophila melanogaster (fruit fly) and related species. It provides curated information on genes, genomes, phenotypes, genetic variants, stocks, and experimental tools for the Drosophila research community. The database integrates sequence data, genome annotations, functional characterizations, expression patterns, genetic interactions, disease models, and orthology relationships. FlyBase serves as the primary reference for Drosophila gene nomenclature and provides extensive tools for querying and analyzing genomic data across multiple Drosophila species." ; dcterms:identifier "flybase" ; dcterms:modified "2025-10-08T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:flybase.bulk.data, kgr:flybase.gene.sequences.fasta, kgr:flybase.genome.annotations.gff, kgr:flybase.genome.sequences.fasta, kgr:flybase.jbrowse, kgr:flybase.web.interface, kgr:genecards.model.organisms, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:identifier "flybase" ; schema1:name "FlyBase" ; doap:repository ; skos:inScheme "biological systems", "genomics", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:fma a schema1:Ontology ; rdfs:label "Foundational Model of Anatomy Ontology (subset)" ; dcterms:description "This is currently a slimmed down version of FMA" ; dcterms:identifier "fma" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:fma.owl ; schema1:name "Foundational Model of Anatomy Ontology (subset)" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:fobi a schema1:Ontology ; rdfs:label "Food-Biomarker Ontology" ; dcterms:description "FOBI (Food-Biomarker Ontology) is an ontology to represent food intake data and associate it with metabolomic data" ; dcterms:identifier "fobi" ; dcterms:license ; schema1:hasPart kgr:fobi.owl ; schema1:name "Food-Biomarker Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:foodb a schema1:DataSource ; rdfs:label "FooDB" ; dcterms:created "2025-05-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Food Database (FooDB) is the world's largest and most comprehensive resource on food constituents, chemistry, and biology. It provides detailed information about the chemical constituents found in food, designed for applications in nutrition, food science, dietary planning, and general education." ; dcterms:identifier "foodb" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:foodb.data.csv, kgr:foodb.data.experimental_cms, kgr:foodb.data.experimental_msms, kgr:foodb.data.fid, kgr:foodb.data.images, kgr:foodb.data.json, kgr:foodb.data.mysql, kgr:foodb.data.nmr, kgr:foodb.data.predicted_cms, kgr:foodb.data.predicted_msms, kgr:foodb.data.xml, kgr:foodb.web, kgr:spoke.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "foodb" ; schema1:name "FooDB" ; skos:inScheme "biomedical", "food science", "health", "nutrition" ; adms:status "Active" ; foaf:homepage . kgr:fooddb a schema1:DataSource ; rdfs:label "FooDB" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "FooDB (The Food Database) is the world's largest and most comprehensive freely accessible resource on food constituents, chemistry, and biology, providing detailed information about chemical constituents found in food with over 100 data fields per compound covering nomenclature, structure, chemical properties, food sources, sensory properties, and health effects." ; dcterms:identifier "fooddb" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:fooddb.csv, kgr:fooddb.json, kgr:fooddb.mysql, kgr:fooddb.portal, kgr:fooddb.xml ; schema1:identifier "fooddb" ; schema1:name "FooDB" ; skos:altLabel "FooDB", "The Food Database" ; skos:inScheme "biomedical", "nutrition" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:wishart-lab . kgr:foodon a schema1:Ontology ; rdfs:label "Food Ontology" ; dcterms:description "A broadly scoped ontology representing entities which bear a food role . It encompasses materials in natural ecosystems and agriculture that are consumed by humans and domesticated animals. This includes any generic (unbranded) raw or processed food material found in processing plants, markets, stores or food distribution points. FoodOn also imports nutritional component and dietary pattern terms from other OBO Foundry ontologies to support interoperability in diet and nutrition research" ; dcterms:identifier "foodon" ; dcterms:license ; schema1:hasPart kgr:foodon.owl, kgr:foodon_core.owl ; schema1:name "Food Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:forum a schema1:KnowledgeGraph ; rdfs:label "FORUM" ; dcterms:created "2025-12-11T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "FORUM is a Knowledge Graph providing a semantic representation of relations between chemicals and biomedical concepts. It is built from a federation of life science databases and scientific literature repositories. FORUM supports metabolomics studies by enabling the identification of biomarkers and classification of individuals through comprehensive chemical-concept associations." ; dcterms:identifier "forum" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:forum.api, kgr:forum.graph.dump, kgr:forum.void, kgr:forum.webapp ; schema1:name "FORUM" ; doap:repository ; skos:inScheme "biomedical", "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:fovt a schema1:Ontology ; rdfs:label "FuTRES Ontology of Vertebrate Traits" ; dcterms:description "FuTRES Ontology of Vertebrate Traits is an application ontology used to convert vertebrate trait data in spreadsheet to triples. FOVT leverages the BioCollections Ontology (BCO) to link observations of individual specimens to their trait values. Traits are defined in the Ontology of Biological Attributes (OBA)." ; dcterms:identifier "fovt" ; dcterms:license ; schema1:hasPart kgr:fovt.fovt-base.obo, kgr:fovt.fovt-base.owl, kgr:fovt.obo, kgr:fovt.owl ; schema1:name "FuTRES Ontology of Vertebrate Traits" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:fypo a schema1:Ontology ; rdfs:label "Fission Yeast Phenotype Ontology" ; dcterms:description "FYPO is a formal ontology of phenotypes observed in fission yeast." ; dcterms:identifier "fypo" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:fypo.obo, kgr:fypo.owl ; schema1:name "Fission Yeast Phenotype Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:gallont a schema1:Ontology ; rdfs:label "Plant Gall Ontology" ; dcterms:description "Ontology of plant gall phenotypes. Plant galls are novel plant structures, generated by plants in response to biotic stressors. This ontology is used to annotate gall phenotypes (e.g., their colors, textures, sizes, locations on the plant) in a semantic way, in order to facilitate discoveries about the genetic and physiologic mechanisms responsible for such phenotypes. The ontology can also be used as a controlled vocabulary for natural language descriptions of plant galls." ; dcterms:identifier "gallont" ; dcterms:license ; schema1:hasPart kgr:gallont.json, kgr:gallont.obo, kgr:gallont.owl ; schema1:name "Plant Gall Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:gaz a schema1:Ontology ; rdfs:label "Gazetteer" ; dcterms:description "A gazetteer constructed on ontological principles. The countries are actively maintained." ; dcterms:identifier "gaz" ; dcterms:license ; schema1:hasPart kgr:gaz.gaz-countries.owl, kgr:gaz.obo, kgr:gaz.owl ; schema1:name "Gazetteer" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:gdc a schema1:DataSource ; rdfs:label "National Cancer Institute Genomic Data Commons Data Portal" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The NCI Genomic Data Commons (GDC) is a data sharing platform promoting precision medicine in oncology by providing unified access to harmonized cancer genomic and clinical data from major cancer research programs including TCGA and TARGET, processed with standardized bioinformatics pipelines to enable direct comparison and integrated analysis." ; dcterms:identifier "gdc" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:gdc.api, kgr:gdc.data-transfer-tool, kgr:gdc.portal ; schema1:identifier "gdc" ; schema1:name "National Cancer Institute Genomic Data Commons Data Portal" ; skos:altLabel "GDC", "Genomic Data Commons" ; skos:inScheme "biomedical", "clinical", "genomics", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:gdsc a schema1:DataSource ; rdfs:label "Genomics of Drug Sensitivity in Cancer" ; dcterms:created "2025-05-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Genomics of Drug Sensitivity in Cancer (GDSC) is a database and resource that characterizes cancer cell lines and their responses to anti-cancer drugs. It contains drug screening data for over 1000 cancer cell lines with hundreds of compounds, as well as genomic feature data such as mutations, copy number variations, methylation, and gene expression. The aim is to identify molecular features of cancers that predict response to anti-cancer drugs." ; dcterms:identifier "gdsc" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:gdsc.anova, kgr:gdsc.drug_data, kgr:gdsc.ftp, kgr:gdsc.genetic_features, kgr:gdsc.site, kgr:spoke.graph ; schema1:identifier "gdsc" ; schema1:name "Genomics of Drug Sensitivity in Cancer" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "genomics", "health", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:gecko a schema1:Ontology ; rdfs:label "Genomics Cohorts Knowledge Ontology" ; dcterms:description "An ontology to represent genomics cohort attributes" ; dcterms:identifier "gecko" ; dcterms:license ; schema1:hasPart kgr:gecko.owl ; schema1:name "Genomics Cohorts Knowledge Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:gelinea a schema1:DataSource ; rdfs:label "GeLiNEA" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Gene-List Network Enrichment Analysis (GeLiNEA) is a computational tool that evaluates the significance of connections between a gene list (e.g., from screening experiments) and curated gene sets (e.g., MSigDB) within protein-protein association networks (e.g., STRING). It uses a null model of degree-preserving random gene lists to assess statistical significance of network connections, supporting pathway enrichment analysis and functional interpretation of experimental gene lists." ; dcterms:identifier "gelinea" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-11-17T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:gelinea.tool ; schema1:identifier "gelinea" ; schema1:name "GeLiNEA" ; doap:repository ; skos:altLabel "GeLiNEA", "Gene-List Network Enrichment Analysis" ; skos:inScheme "biomedical", "genomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:genage a schema1:DataSource ; rdfs:label "GenAge Database of Ageing-Related Genes" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "GenAge is a curated database of genes related to ageing and longevity, part of the Human Ageing Genomic Resources (HAGR). It includes genes directly related to human ageing plus candidate genes from model organisms (yeast, worms, flies, mice), manually curated by experts to ensure high-quality content." ; dcterms:identifier "genage" ; dcterms:isReferencedBy , , ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:genage.human, kgr:genage.human.search, kgr:genage.models, kgr:genage.models.search ; schema1:identifier "genage" ; schema1:name "GenAge Database of Ageing-Related Genes" ; skos:altLabel "GenAge", "The Aging Gene Database" ; skos:inScheme "genomics", "health" ; adms:status "Active" ; foaf:homepage . kgr:gencc a schema1:DataSource ; rdfs:label "The Gene Curation Coalition (GenCC)" ; dcterms:created "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Gene Curation Coalition (GenCC) is a global collaborative effort to harmonize gene-disease validity curation across multiple expert organizations and clinical testing laboratories. GenCC brings together leading resources including ClinGen, OMIM, Orphanet, DECIPHER, Genomics England PanelApp, and multiple clinical diagnostic laboratories to standardize terminology and share gene-disease validity assertions publicly. The coalition was formed in 2018 to address the lack of universal standards and terminologies for defining gene-disease relationships used in genomic medicine and research. Through a modified Delphi survey involving the international genetics community, GenCC established consensus terminology for grading gene-disease validity, including standardized terms such as Definitive, Strong, Moderate, Limited, Disputed Evidence, Refuted Evidence, No Known Disease Relationship, and Animal Model Only. The GenCC database provides curated gene-disease validity assertions with a focus on monogenic Mendelian diseases, including information on mode of inheritance, classification confidence level, supporting evidence, and links to detailed curations from member organizations." ; dcterms:identifier "gencc" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:gencc.database, kgr:gencc.downloads, kgr:gencc.search_interface ; schema1:identifier "gencc" ; schema1:name "The Gene Curation Coalition (GenCC)" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage . kgr:gencode a schema1:DataSource ; rdfs:label "GENCODE" ; dcterms:created "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "GENCODE is a comprehensive and high-quality reference annotation of the human and mouse genomes, providing evidence-based gene annotations including protein-coding genes, long non-coding RNAs, small RNAs, pseudogenes, and other genomic features based on manual curation and computational analysis." ; dcterms:identifier "gencode" ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:gencode.human.gtf, kgr:gencode.mouse.gtf, kgr:gencode.primary, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "GENCODE" ; skos:altLabel "Encyclopedia of genes and gene variants", "GENCODE" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage . kgr:gendr a schema1:DataSource ; rdfs:label "GenDR Database of Dietary Restriction-Related Genes" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "GenDR (Database of Dietary Restriction-Related Genes) is a curated database of genes associated with dietary restriction (DR) and its effects on longevity and aging. Part of the Human Ageing Genomic Resources (HAGR), GenDR compiles experimental data on genes whose expression or function is altered by dietary restriction regimens across multiple model organisms. The database includes information on gene function, expression changes, and links to aging-related phenotypes." ; dcterms:identifier "gendr" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:gendr.api, kgr:gendr.data, kgr:gendr.web ; schema1:identifier "gendr" ; schema1:name "GenDR Database of Dietary Restriction-Related Genes" ; skos:altLabel "GenDR", "gendr" ; skos:inScheme "biological systems", "genomics", "health", "nutrition" ; adms:status "Active" ; foaf:homepage . kgr:gene-ontology a schema1:Ontology ; rdfs:label "Gene Ontology (GO)" ; dcterms:created "2025-12-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Gene Ontology (GO) is a major bioinformatics initiative to standardize the representation of gene and gene product attributes across species, databases, and data types. It provides controlled vocabularies (ontologies) for describing molecular functions, cellular components, and biological processes associated with gene products." ; dcterms:identifier "gene-ontology" ; dcterms:license ; dcterms:modified "2025-01-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cam-kp.go-cams, kgr:gene-ontology.amigo, kgr:gene-ontology.api, kgr:go.obo, kgr:go.owl ; schema1:name "Gene Ontology (GO)" ; doap:repository ; skos:altLabel "GO" ; skos:inScheme "biological systems", "biomedical" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:gene-ontology-consortium . kgr:gene2phenotype a schema1:DataSource ; rdfs:label "Gene2Phenotype" ; dcterms:created "2026-01-23T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A curated gene-disease evidence resource linking genes, variant mechanisms, and clinical phenotypes to support rare disease interpretation." ; dcterms:identifier "gene2phenotype" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:gene2phenotype.api, kgr:gene2phenotype.api.schema, kgr:gene2phenotype.portal, kgr:translator.gene2phenotype.graph ; schema1:name "Gene2Phenotype" ; doap:repository ; skos:altLabel "G2P", "Gene2Phenotype" ; skos:inScheme "genomics", "health", "phenotype" ; adms:status "Active" ; foaf:homepage . kgr:genebass a schema1:DataSource ; rdfs:label "Genebass: Gene-based association summary statistics" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Genebass is a comprehensive resource of exome-based gene-level and single-variant association statistics from 281,852 UK Biobank participants across 3,817 phenotypes, enabling large-scale genotype-phenotype association studies." ; dcterms:identifier "genebass" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:genebass.portal ; schema1:identifier "genebass" ; schema1:name "Genebass: Gene-based association summary statistics" ; skos:altLabel "Gene-based association summary statistics", "Genebass" ; skos:inScheme "biomedical", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:genecards a schema1:Aggregator ; rdfs:label "GeneCards" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "GeneCards is a comprehensive, integrative database that aggregates gene-centric information from over 200 web sources. It provides searchable access to genomic, transcriptomic, proteomic, genetic, clinical and functional information for all annotated and predicted human genes. GeneCards automatically integrates data on gene function, pathways, diseases, variants, expression patterns, protein interactions, and more. The database includes over 443,000 gene entries with rich annotations from sources including HGNC, OMIM, Ensembl, UniProt, NCBI Gene, GTEx, PubMed, and many other major biomedical databases. GeneCards serves as a central hub for human gene information, making it accessible to researchers worldwide." ; dcterms:identifier "genecards" ; dcterms:modified "2025-10-08T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:genecards.clinical.trials, kgr:genecards.disease.associations, kgr:genecards.expression.data, kgr:genecards.gene.annotations, kgr:genecards.gene.ontology, kgr:genecards.literature, kgr:genecards.model.organisms, kgr:genecards.pathway.data, kgr:genecards.pharmacogenomics, kgr:genecards.protein.interactions, kgr:genecards.protein.structures, kgr:genecards.variant.data, kgr:genecards.web.interface, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "GeneCards" ; skos:inScheme "biomedical", "clinical", "genomics", "health", "pathways", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:genemania a schema1:DataSource ; rdfs:label "GeneMANIA" ; dcterms:created "2025-08-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "GeneMANIA is a gene function prediction resource that integrates many types of functional association networks (co-expression, protein and genetic interactions, pathways, co-localization, and shared protein domains) and uses adaptive network weighting with label propagation to prioritize related genes and expand gene lists." ; dcterms:identifier "genemania" ; dcterms:isReferencedBy ; dcterms:modified "2025-08-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:genemania.web, kgr:pheknowlator.graph ; schema1:name "GeneMANIA" ; skos:inScheme "biomedical", "genomics", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:genepio a schema1:Ontology ; rdfs:label "Genomic Epidemiology Ontology" ; dcterms:description "The Genomic Epidemiology Ontology (GenEpiO) covers vocabulary necessary to identify, document and research foodborne pathogens and associated outbreaks." ; dcterms:identifier "genepio" ; dcterms:license ; schema1:hasPart kgr:genepio.owl ; schema1:name "Genomic Epidemiology Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:geneprof a schema1:DataSource ; rdfs:label "GeneProf" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "GeneProf was a database resource for gene expression profiles and functional genomics data. The underlying resource is currently inaccessible (404 error), indicating the resource is likely inactive or deprecated." ; dcterms:identifier "geneprof" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:geneprof.translator-wiki ; schema1:identifier "geneprof" ; schema1:name "GeneProf" ; skos:inScheme "genomics" ; adms:status "Inactive" ; foaf:homepage . kgr:genetics-kp a schema1:KnowledgeGraph ; rdfs:label "Genetics KP" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Translator Knowledge Provider focusing on genetic data." ; dcterms:identifier "genetics-kp" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:genetics-kp.code, kgr:genetics-kp.docs ; schema1:name "Genetics KP" ; skos:inScheme "health" ; adms:status "Active" . kgr:geneticskp a schema1:KnowledgeGraph ; rdfs:label "Genetics KP" ; dcterms:created "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Genetics KP is a Translator knowledge provider focused on integrating genetic association evidence (including GWAS-derived signals) into a unified framework for gene-disease relationship analysis." ; dcterms:identifier "geneticskp" ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:geneticskp.trapi, kgr:translator.geneticskp.graph ; schema1:name "Genetics KP" ; doap:repository ; skos:inScheme "genomics", "health", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:geno a schema1:Ontology ; rdfs:label "Genotype Ontology" ; dcterms:description "An integrated ontology for representing the genetic variations described in genotypes, and their causal relationships to phenotype and diseases." ; dcterms:identifier "geno" ; dcterms:license ; schema1:hasPart kgr:chr.model.owl, kgr:geno.owl ; schema1:name "Genotype Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:genomickb a schema1:KnowledgeGraph ; rdfs:label "GenomicKB" ; dcterms:created "2025-03-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Genomic Knowledgebase (GenomicKB) is a database that uses a knowledge graph to consolidate genomic datasets and annotations. GenomicKB integrates data from more than 30 consortia, in which the genomic entities and relationships are represented as diverse nodes and edges with properties." ; dcterms:identifier "genomickb" ; dcterms:license ; dcterms:modified "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:genomickb.graph, kgr:genomickb.site ; schema1:name "GenomicKB" ; skos:inScheme "biological systems", "biomedical", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:genophenoenvo-kg a schema1:KnowledgeGraph ; rdfs:label "GenoPhenoEnvo Knowledge Graph" ; dcterms:created "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge graph integrating plant genomics, phenomics, and environmental data to predict gene expression patterns across multiple species under different environmental conditions, particularly drought stress" ; dcterms:identifier "genophenoenvo-kg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:genophenoenvo-kg.code, kgr:genophenoenvo-kg.data, kgr:genophenoenvo-kg.neo4j ; schema1:name "GenoPhenoEnvo Knowledge Graph" ; skos:inScheme "biological systems", "biomedical", "environment", "genomics", "phenotype", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:geo a schema1:Ontology ; rdfs:label "Geographical Entity Ontology" ; dcterms:description "An ontology of geographical entities" ; dcterms:identifier "geo" ; dcterms:license ; schema1:hasPart kgr:geo.owl, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "Geographical Entity Ontology" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:geoconnex a schema1:KnowledgeGraph ; rdfs:label "GEOCONNEX" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Geoconnex is an open, community-driven knowledge graph linking U.S. hydrologic features to enable seamless water data discovery, access, and collaborative monitoring." ; dcterms:identifier "geoconnex" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:geoconnex.sparql ; schema1:name "GEOCONNEX" ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:gff a schema1:DataModel ; rdfs:label "GFF" ; dcterms:created "2025-09-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "GFF (General Feature Format) is a standard file format for describing genomic features including genes, transcripts, exons, and other sequence annotations, widely used in genome annotation and bioinformatics." ; dcterms:identifier "gff" ; dcterms:modified "2026-01-05T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:chr.model.owl, kgr:gff.specification ; schema1:name "GFF" ; skos:altLabel "GFF", "GFF3", "General Feature Format" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:sequence-ontology . kgr:ghr a schema1:DataSource ; rdfs:label "Genetics Home Reference" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Consumer health resource about genetic conditions from the US National Library of Medicine. This resource has been merged into MedlinePlus Genetics as of 2020." ; dcterms:identifier "ghr" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ghr.conditions, kgr:ghr.gene-catalog, kgr:ghr.portal ; schema1:identifier "ghr" ; schema1:name "Genetics Home Reference" ; skos:altLabel "GHR" ; skos:inScheme "genomics", "health" ; adms:status "Inactive" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:glkb a schema1:DataSource ; rdfs:label "GLKB" ; dcterms:created "2025-03-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Genomic Literature Knowledge Base (GLKB) is a comprehensive and powerful resource that integrates over 263 million biomedical terms and more than 14.6 million biomedical relationships. This collection is curated from 33 million PubMed abstracts and nine well-established biomedical repositories, offering an unparalleled wealth of knowledge for researchers and practitioners in the field." ; dcterms:identifier "glkb" ; dcterms:isReferencedBy ; dcterms:modified "2025-04-11T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:glkb.site ; schema1:name "GLKB" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:globi a schema1:KnowledgeGraph ; rdfs:label "Global Biotic Interactions (GloBI)" ; dcterms:created "2025-09-14T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Global Biotic Interactions (GloBI) integrates and normalizes species interaction datasets (e.g., predation, pollination, parasitism, mutualism, host-pathogen) from many primary sources to provide open, queryable access to organism-to-organism interaction records with taxonomic resolution and provenance." ; dcterms:identifier "globi" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-15T17:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:emikg.kg, kgr:emikg.sparql, kgr:emikg.web, kgr:globi.api, kgr:globi.bee.interactions, kgr:globi.citations.csv, kgr:globi.citations.tsv, kgr:globi.datasets, kgr:globi.datasets.csv, kgr:globi.datasets.tsv, kgr:globi.docs, kgr:globi.fields.csv, kgr:globi.fields.json, kgr:globi.interactions.csv, kgr:globi.interactions.nq, kgr:globi.interactions.tsv, kgr:globi.neo4j.graphdb, kgr:globi.portal, kgr:globi.refuted_interactions.csv, kgr:globi.refuted_interactions.tsv, kgr:globi.refuted_verbatim_interactions.csv, kgr:globi.refuted_verbatim_interactions.tsv, kgr:globi.release, kgr:globi.taxon_cache.tsv, kgr:globi.taxon_map.tsv, kgr:globi.verbatim_interactions.csv, kgr:globi.verbatim_interactions.tsv ; schema1:name "Global Biotic Interactions (GloBI)" ; skos:inScheme "biological systems", "environment", "public health" ; adms:status "Active" ; foaf:homepage . kgr:glycocoo a schema1:Ontology ; rdfs:label "GlycoConjugate Ontology (GlycoCoO)" ; dcterms:created "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Glycoconjugate Ontology (GlycoCoO) is a standard semantic framework for describing and representing glycoproteomics and glycolipidomics data in RDF format. It provides a formal representation of glycoconjugate structures (glycoproteins and glycolipids), their associated metadata including publication information, biological source data, experimental evidence, and abundance ratios. GlycoCoO extends GlycoRDF by creating subclasses of ReferencedCompound including ReferencedGlycoconjugate, ReferencedProtein, and ReferencedLipid, enabling comprehensive annotation of glycan structures attached to proteins and lipids with contextual information such as glycosylation sites, disease associations, tissue and cell line sources, and analytical methods. The ontology supports both complete structural information and compositional data, can represent single glycans or glycoform mixtures at specific sites, and accommodates partially missing site information when no mapping is performed. It has been adopted by major glycoproteomics databases including UniCarbKB, GlyConnect, and GlycoNAVI, enabling federated queries across resources to retrieve integrated information about glycoconjugates from multiple publications and experimental contexts." ; dcterms:identifier "glycocoo" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:glycocoo.ontology, kgr:glycocoo.rdf-samples, kgr:glycocoo.sparql-examples, kgr:glycocoo.wiki, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "GlycoConjugate Ontology (GlycoCoO)" ; skos:inScheme "biological systems", "biomedical", "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:glyconnect a schema1:DataSource ; rdfs:label "GlyConnect" ; dcterms:created "2025-05-07T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "GlyConnect is a knowledgebase of glycoproteins spanning protein, glycosite and glycan information, with data on various species, tissues, and disease associations." ; dcterms:identifier "glyconnect" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-07T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:glyconnect.api.rest, kgr:glyconnect.api.sparql, kgr:glyconnect.compositions, kgr:glyconnect.immunoglobulins, kgr:glyconnect.site ; schema1:name "GlyConnect" ; skos:inScheme "biological systems", "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:sib . kgr:glycordf a schema1:Ontology ; rdfs:label "GlycoRDF: An Ontology to Standardize Glycomics Data in RDF" ; dcterms:created "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description """GlycoRDF is a standardized ontology for representing glycomics data in Resource Description Framework (RDF) format. It provides a common machine-readable interface for glycomics databases, enabling integration and cross-referencing of glycan structures, biological source information, publications, and experimental data. Developed by an international consortium of glycomics bioinformatics experts, GlycoRDF defines classes and predicates for diverse glycomics data types including glycan sequences, monosaccharide compositions, biological sources, literature references, NMR data, mass spectrometry data, and liquid chromatography-mass spectrometry data. The ontology reuses concepts from established ontologies including UniProt Core, Bibliographic Ontology, Dublin Core Metadata Initiative, and HUPO-PSI Mass Spectrometry Ontology. GlycoRDF has been adopted by major glycomics database providers including CSDB, MonosaccharideDB, GlycomeDB, UniCarbKB, GlycoEpitope, GlycoNAVI, and GlycoProtDB, facilitating semantic web applications and SPARQL queries across heterogeneous glycomics data sources. """ ; dcterms:identifier "glycordf" ; dcterms:isReferencedBy , ; dcterms:modified "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:glycordf.bioportal, kgr:glycordf.documentation, kgr:glycordf.github, kgr:glycordf.homepage, kgr:glycordf.java-source, kgr:glycordf.ontology, kgr:glycordf.wiki, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "GlycoRDF: An Ontology to Standardize Glycomics Data in RDF" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "chemistry and biochemistry" ; skos:related "biopragmatics" ; adms:status "Active" ; foaf:homepage . kgr:glygen a schema1:DataSource ; rdfs:label "GlyGen" ; dcterms:created "2025-05-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "GlyGen is an integrated, data-driven resource for glycoproteins, glycans, and carbohydrate-active enzymes, providing researchers with comprehensive, high-quality data on glycobiology." ; dcterms:identifier "glygen" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-08-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:biomarkerkg.nodes.biomarker, kgr:glygen.api, kgr:glygen.data.site, kgr:glygen.site ; schema1:name "GlyGen" ; doap:repository ; skos:inScheme "biological systems", "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:gnbr a schema1:KnowledgeGraph ; rdfs:label "GNBR" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Global Network of Biomedical Relationships (GNBR) is a large-scale biomedical knowledge graph derived from literature. GNBR uses text mining of PubMed abstracts to extract typed relationships between genes, diseases and drugs/chemicals, organizing them into semantic themes suitable for link prediction and downstream applications such as drug repurposing. GNBR has been widely used as a text-derived KG resource and is available via GitHub and Zenodo." ; dcterms:identifier "gnbr" ; dcterms:isReferencedBy ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:gnbr.graph, kgr:pharmkg.graph ; schema1:identifier "gnbr" ; schema1:name "GNBR" ; doap:repository ; skos:inScheme "biomedical", "health", "literature" ; adms:status "Active" ; foaf:homepage . kgr:gno a schema1:Ontology ; rdfs:label "Glycan Naming and Subsumption Ontology (GNOme)" ; dcterms:description "GlyTouCan provides stable accessions for glycans described at varyious degrees of characterization, including compositions (no linkage) and topologies (no carbon bond positions or anomeric configurations). GNOme organizes these stable accessions for interative browsing, for text-based searching, and for automated reasoning with well-defined characterization levels." ; dcterms:identifier "gno" ; dcterms:license ; schema1:hasPart kgr:gno.json, kgr:gno.obo, kgr:gno.owl ; schema1:name "Glycan Naming and Subsumption Ontology (GNOme)" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:go a schema1:Ontology ; rdfs:label "Gene Ontology" ; dcterms:description "An ontology for describing the function of genes and gene products" ; dcterms:identifier "go" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:bioteque.embeddings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:chr.model.owl, kgr:clinicalkg.graph, kgr:drugmechdb.graph, kgr:efo.obo, kgr:efo.owl, kgr:genecards.gene.ontology, kgr:go.extensions.go-plus.json, kgr:go.extensions.go-plus.owl, kgr:go.extensions.go-taxon-groupings.owl, kgr:go.go-base.owl, kgr:go.go-basic.json, kgr:go.go-basic.obo, kgr:go.json, kgr:go.obo, kgr:go.owl, kgr:go.snapshot.go.obo, kgr:go.snapshot.go.owl, kgr:goa.ftp, kgr:goa.human, kgr:goa.mapping-files, kgr:goa.mouse, kgr:goa.pdb, kgr:goa.proteomes, kgr:goa.quickgo, kgr:goa.uniprot, kgr:indra.cogex.code, kgr:interpro.interpro2go, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:mechreponet.kg, kgr:microbiomekg.api, kgr:ncbigene.gene2go, kgr:obo-db-ingest.bigg.compartment.sssom.tsv, kgr:pheknowlator.graph, kgr:proteomehd.data, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:spoke.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:swisslipid.go, kgr:unibiomap.auxs, kgr:unibiomap.go_desc, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:name "Gene Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:go-cam a schema1:DataModel ; rdfs:label "Gene Ontology Causal Activity Modeling (GO-CAM)" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A structured framework for integrating Gene Ontology annotations into computable models of biological functions." ; dcterms:identifier "go-cam" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:go-cam.api, kgr:go-cam.browser, kgr:go-cam.minerva, kgr:go-cam.model, kgr:go-cam.noctua, kgr:translator.go_cam.graph ; schema1:identifier "go-cam" ; schema1:name "Gene Ontology Causal Activity Modeling (GO-CAM)" ; doap:repository ; skos:inScheme "biological systems", "genomics", "pathways", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:goa a schema1:DataSource ; rdfs:label "GOA" ; dcterms:created "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description """The Gene Ontology Annotation (GOA) Database provides high-quality Gene Ontology (GO) annotations to proteins in the UniProt Knowledgebase (UniProtKB), RNA molecules from RNAcentral, and protein complexes from the Complex Portal. GOA files contain a mixture of manual annotations supplied by members of the Gene Ontology Consortium and computationally assigned GO terms describing gene products. All annotations are clearly indicated by associated evidence codes with links to source data. Files are released approximately every four weeks in coordination with UniProtKB releases. """ ; dcterms:identifier "goa" ; dcterms:license ; dcterms:modified "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:automat.humangoa, kgr:goa.documentation, kgr:goa.ftp, kgr:goa.human, kgr:goa.mapping-files, kgr:goa.mouse, kgr:goa.pdb, kgr:goa.portal, kgr:goa.proteomes, kgr:goa.quickgo, kgr:goa.uniprot, kgr:proteomehd.data, kgr:translator.goa.graph ; schema1:name "GOA" ; skos:inScheme "biological systems", "genomics", "proteomics" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:goldterms a schema1:DataModel ; rdfs:label "GOLD Environmental Paths" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Translation of JGI GOLD (Genomes OnLine Database) ecosystem classification paths to OWL, plus mappings to MIxS and environment ontologies like ENVO." ; dcterms:identifier "goldterms" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:goldterms.bioportal, kgr:goldterms.data.owl, kgr:goldterms.definitions.yaml ; schema1:name "GOLD Environmental Paths" ; doap:repository ; skos:inScheme "biological systems", "environment", "genomics", "microbiology" ; skos:related "biopragmatics", "core" ; adms:status "Active" ; foaf:homepage . kgr:gp-kg a schema1:KnowledgeGraph ; rdfs:label "GP-KG" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge graph for drug repurposing" ; dcterms:identifier "gp-kg" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:gp-kg.graph, kgr:gp-kg.process.kg-predict ; schema1:name "GP-KG" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:greengenes a schema1:DataSource ; rdfs:label "Greengenes2" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Greengenes2 is a comprehensive reference database and phylogenetic tree for 16S rRNA gene sequences that unifies microbial data from multiple sources into a single coherent framework. It provides standardized taxonomic assignments and phylogenetic placement for microbiome research and enables consistent analysis across different studies and sequencing platforms." ; dcterms:identifier "greengenes" ; dcterms:isReferencedBy ; dcterms:modified "2025-09-24T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:greengenes.ftp, kgr:greengenes.phylogeny, kgr:greengenes.portal, kgr:greengenes.qiime2-plugin, kgr:greengenes.sequences, kgr:greengenes.taxonomy, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "Greengenes2" ; doap:repository ; skos:inScheme "biomedical", "microbiology", "microbiome", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:gro a schema1:Ontology ; rdfs:label "Cereal Plant Gross Anatomy" ; dcterms:description "Description unavailable." ; dcterms:identifier "gro" ; dcterms:license "Not specified" ; schema1:name "Cereal Plant Gross Anatomy" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:gsso a schema1:Ontology ; rdfs:label "Gender, Sex, and Sexual Orientation (GSSO) ontology" ; dcterms:description "The Gender, Sex, and Sexual Orientation (GSSO) ontology has terms for annotating interdisciplinary information concerning gender, sex, and sexual orientation for primary usage in the biomedical and adjacent sciences." ; dcterms:identifier "gsso" ; dcterms:license ; schema1:hasPart kgr:gsso.json, kgr:gsso.obo, kgr:gsso.owl ; schema1:name "Gender, Sex, and Sexual Orientation (GSSO) ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:gtex a schema1:DataSource ; rdfs:label "GTEx" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Genotype-Tissue Expression (GTEx) project provides a comprehensive resource to study tissue-specific gene expression and regulation. Samples were collected from 54 non-diseased tissue sites across nearly 1000 individuals, primarily for molecular assays including WGS, WES, and RNA-Seq." ; dcterms:identifier "gtex" ; dcterms:isReferencedBy , ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:automat.gtex, kgr:bioteque.embeddings, kgr:epigraphdb.graph, kgr:genecards.expression.data, kgr:gtex.api, kgr:gtex.bulk-data, kgr:gtex.dbgap-data, kgr:gtex.eqtl-data, kgr:gtex.portal, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "gtex" ; schema1:name "GTEx" ; doap:repository ; skos:inScheme "anatomy and development", "biomedical", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:gtopdb a schema1:DataSource ; rdfs:label "Guide to Pharmacology" ; dcterms:created "2025-05-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The IUPHAR/BPS Guide to PHARMACOLOGY is an expert-curated resource providing quantitative information on drug targets and the substances that act on them, including approved drugs and experimental therapeutics" ; dcterms:identifier "gtopdb" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:automat.gtopdb, kgr:gtopdb.api.rest, kgr:gtopdb.approved_drugs.csv, kgr:gtopdb.database, kgr:gtopdb.download.rdf, kgr:gtopdb.download.sdf, kgr:gtopdb.immunopharmacology, kgr:gtopdb.interactions.csv, kgr:gtopdb.ligands.csv, kgr:gtopdb.malaria, kgr:gtopdb.targets.csv, kgr:gtopdb.web, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:translator.gtopdb.graph ; schema1:identifier "gtopdb" ; schema1:name "Guide to Pharmacology" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "health", "pharmacology", "translational" ; adms:status "Active" ; foaf:homepage . kgr:gtrnadb a schema1:DataSource ; rdfs:label "GtRNAdb" ; dcterms:created "2009-01-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Genomic tRNA Database (GtRNAdb) is a comprehensive repository of transfer RNA (tRNA) gene predictions identified by tRNAscan-SE in complete and draft genomes across all domains of life. The database contains over 431,000 tRNA gene predictions from 4,867 genomes (609 eukaryotes, 220 archaea, and 4,038 bacteria) as of Data Release 22 (September 2024). GtRNAdb provides detailed annotations including tRNA sequences, predicted secondary structures, isotype-specific scoring, genomic context via UCSC Genome Browser integration, and functional data such as RNA modifications from MODOMICS, tRNA fragment expression profiles, genomic variants from dbSNP, epigenetic information from ENCODE, and evolutionary conservation across species. The database enables comparative analysis through search capabilities by phylogenetic domain, species, amino acid isotypes, anticodons, tRNA scores, structural features, and sequence similarity via BLAST." ; dcterms:identifier "gtrnadb" ; dcterms:isReferencedBy , ; dcterms:modified "2025-10-21T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , ; schema1:hasPart kgr:gtrnadb.archives, kgr:gtrnadb.blast, kgr:gtrnadb.browse, kgr:gtrnadb.docs, kgr:gtrnadb.faq, kgr:gtrnadb.portal, kgr:gtrnadb.sifter, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "GtRNAdb" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:gtrx a schema1:Aggregator ; rdfs:label "Genome-to-Treatment" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Genome-to-Treatment (gTRx) is a NCATS Translator knowledge provider that integrates genomic, pharmacological, and clinical data to support precision medicine applications. It connects genetic variants with drug treatments and clinical outcomes, enabling researchers to explore relationships between genomic profiles and therapeutic options. The resource aggregates data from multiple sources to provide evidence-based connections between genes, variants, drugs, and diseases." ; dcterms:identifier "gtrx" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:gtrx.api, kgr:gtrx.data ; schema1:identifier "gtrx" ; schema1:name "Genome-to-Treatment" ; skos:altLabel "Genome-to-Treatment", "gTRx" ; skos:inScheme "biomedical", "genomics", "pharmacology", "precision medicine", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:gutmgene a schema1:DataSource ; rdfs:label "GutMGene" ; dcterms:created "2025-04-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A manually curated database of target genes of gut microbes and microbial metabolites in humans and mice." ; dcterms:identifier "gutmgene" ; dcterms:isReferencedBy , ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:gutmgene.site, kgr:mgmlink.code ; schema1:name "GutMGene" ; skos:inScheme "biological systems", "microbiology" ; adms:status "Active" ; foaf:homepage . kgr:gwascatalog a schema1:DataSource ; rdfs:label "GWAS Catalog" ; dcterms:created "2025-07-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The NHGRI-EBI GWAS Catalog is a curated, searchable, and freely available database of SNP-trait associations from published and submitted genome-wide association studies. Expert curators extract reported traits, significant variant-trait associations, and study metadata, providing an integrated resource updated on a weekly cycle and accessible via web interfaces, bulk downloads, summary statistics, and a REST API." ; dcterms:identifier "gwascatalog" ; dcterms:license ; dcterms:modified "2025-09-02T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:aop-db.data, kgr:automat.gwascatalog, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:disgenet.data, kgr:genecards.variant.data, kgr:gwascatalog.api, kgr:gwascatalog.associations.json, kgr:gwascatalog.associations.owl, kgr:gwascatalog.associations.tsv, kgr:gwascatalog.diagram.archive, kgr:gwascatalog.diagram.current, kgr:gwascatalog.studies.tsv, kgr:gwascatalog.summary_statistics.ftp, kgr:gwascatalog.traits_efo.tsv, kgr:gwascatalog.variants.tsv, kgr:gwascatalog.web, kgr:indra.cogex.code, kgr:spoke.graph ; schema1:identifier "gwas-catalog" ; schema1:name "GWAS Catalog" ; skos:inScheme "biomedical", "genomics", "health", "investigations" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:habronattus a schema1:Ontology ; rdfs:label "Habronattus courtship" ; dcterms:description "Description unavailable." ; dcterms:identifier "habronattus" ; dcterms:license "Not specified" ; schema1:name "Habronattus courtship" ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:hancestro a schema1:Ontology ; rdfs:label "Human Ancestry Ontology" ; dcterms:description "The Human Ancestry Ontology (HANCESTRO) provides a systematic description of the ancestry concepts used in the NHGRI-EBI Catalog of published genome-wide association studies." ; dcterms:identifier "hancestro" ; dcterms:license ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:hancestro-base.owl, kgr:hancestro.owl ; schema1:name "Human Ancestry Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:hao a schema1:Ontology ; rdfs:label "Hymenoptera Anatomy Ontology" ; dcterms:description "A structured controlled vocabulary of the anatomy of the Hymenoptera (bees, wasps, and ants)" ; dcterms:identifier "hao" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:hao.depictions.owl, kgr:hao.obo, kgr:hao.owl ; schema1:name "Hymenoptera Anatomy Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:harmonizome-kg a schema1:KnowledgeGraph ; rdfs:label "Harmonizome-KG" ; dcterms:created "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Harmonizome-KG is a comprehensive knowledge graph derived from the Harmonizome database, integrating functional genomics data across multiple biological domains to connect genes with their functional annotations, regulatory relationships, protein interactions, and phenotypic associations in a unified graph structure." ; dcterms:identifier "harmonizome-kg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:harmonizome-kg.api, kgr:harmonizome-kg.graph, kgr:harmonizome-kg.portal ; schema1:name "Harmonizome-KG" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "genomics", "systems biology" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:hetionet a schema1:KnowledgeGraph ; rdfs:label "Hetionet" ; dcterms:created "2025-06-24T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Hetionet is an integrative network of biomedical knowledge assembled from 29 different databases of genes, compounds, diseases, and more. It combines over 50 years of biomedical information into a single resource." ; dcterms:identifier "hetionet" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:automat.hetio, kgr:hetionet.data.edges, kgr:hetionet.data.json, kgr:hetionet.data.neo4j, kgr:hetionet.data.nodes, kgr:hetionet.neo4j, kgr:hetionet.search, kgr:hetnetpy, kgr:mechreponet.kg ; schema1:identifier "hetionet" ; schema1:name "Hetionet" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "drug discovery", "genomics", "health" ; adms:status "Active" ; foaf:homepage . kgr:hgnc a schema1:DataSource ; rdfs:label "HGNC" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "HGNC is the HUGO Gene Nomenclature Committee. It is a resource for approved human gene names." ; dcterms:identifier "hgnc" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:automat.hgnc, kgr:biogrid.identifiers, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:genecards.gene.annotations, kgr:ibkh.graph, kgr:kinace.portal, kgr:microbiomekg.api, kgr:mondo.sssom, kgr:obo-db-ingest.hgnc.genegroup.json, kgr:obo-db-ingest.hgnc.genegroup.obo, kgr:obo-db-ingest.hgnc.genegroup.owl, kgr:obo-db-ingest.hgnc.json, kgr:obo-db-ingest.hgnc.obo, kgr:obo-db-ingest.hgnc.owl, kgr:obo-db-ingest.hgnc.sssom.tsv, kgr:omim.mim2gene, kgr:pheknowlator.graph, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:scibite.hgnc, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "hgnc" ; schema1:name "HGNC" ; doap:repository ; skos:inScheme "biological systems" ; skos:notation "FAIRsharing.amcv1e" ; adms:status "Active" ; foaf:homepage . kgr:hmdb a schema1:Aggregator ; rdfs:label "Human Metabolome Database" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Human Metabolome Database (HMDB) is a comprehensive curated knowledgebase of small molecule metabolites found in the human body, integrating chemical, clinical, biochemical, spectral, and physiological data along with associated enzyme, transporter, and disease information to support metabolomics, biomarker discovery, systems biology, and precision medicine research." ; dcterms:identifier "hmdb" ; dcterms:license ; dcterms:modified "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:automat.hmdb, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:hmdb.fasta.enzymes, kgr:hmdb.fasta.genes, kgr:hmdb.portal, kgr:hmdb.spectra.all.peaklists, kgr:hmdb.spectra.all.xml, kgr:hmdb.spectra.gc.experimental.xml, kgr:hmdb.spectra.gc.predicted.txt, kgr:hmdb.spectra.gc.predicted.xml, kgr:hmdb.spectra.mass.images, kgr:hmdb.spectra.msms.experimental.txt, kgr:hmdb.spectra.msms.experimental.xml, kgr:hmdb.spectra.msms.predicted.txt, kgr:hmdb.spectra.msms.predicted.xml, kgr:hmdb.spectra.nmr.fid, kgr:hmdb.spectra.nmr.peaklist, kgr:hmdb.spectra.nmr.xml, kgr:hmdb.structures.sdf, kgr:hmdb.xml.metabolites, kgr:hmdb.xml.metabolites.csf, kgr:hmdb.xml.metabolites.feces, kgr:hmdb.xml.metabolites.saliva, kgr:hmdb.xml.metabolites.serum, kgr:hmdb.xml.metabolites.sweat, kgr:hmdb.xml.metabolites.urine, kgr:hmdb.xml.proteins, kgr:icees-kg.graph, kgr:icees-kg.metadata, kgr:icees-kg.trapi, kgr:rampdb.database, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "hmdb" ; schema1:name "Human Metabolome Database" ; adms:status "Active" ; foaf:homepage . kgr:hom a schema1:Ontology ; rdfs:label "Homology Ontology" ; dcterms:description "This ontology represents concepts related to homology, as well as other concepts used to describe similarity and non-homology." ; dcterms:identifier "hom" ; dcterms:license ; schema1:hasPart kgr:hom.owl ; schema1:name "Homology Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:homologene a schema1:DataSource ; rdfs:label "HomoloGene" ; dcterms:created "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "HomoloGene was NCBI's database of homologs (genes with common ancestry) from completely sequenced eukaryotic genomes. The database organized genes into homology groups representing putative orthologs and paralogs across multiple species. HomoloGene was retired in January 2024 and replaced by the NCBI Orthologs dataset, which is now accessible through NCBI Datasets and the Gene database. The last HomoloGene build (build 68) was produced in 2014 and is no longer aligned with current data in NCBI RefSeq and Gene. Historical data from build 68 remains available on FTP for archival purposes only." ; dcterms:identifier "homologene" ; dcterms:modified "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:homologene.data, kgr:homologene.ftp_archive, kgr:homologene.xml ; schema1:identifier "homologene" ; schema1:name "HomoloGene" ; skos:inScheme "biological systems", "genomics" ; adms:status "Inactive" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:hp a schema1:Ontology ; rdfs:label "Human Phenotype Ontology (HPO)" ; dcterms:description "The Human Phenotype Ontology (HPO) is a structured and controlled vocabulary for the phenotypic features encountered in human hereditary and other disease." ; dcterms:identifier "hp" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:disgenet.data, kgr:drug-approvals-kp.graph.edges, kgr:drug-approvals-kp.graph.nodes, kgr:drugmechdb.graph, kgr:efo.obo, kgr:efo.owl, kgr:hp.genes_to_phenotype.txt, kgr:hp.hp-base.json, kgr:hp.hp-base.obo, kgr:hp.hp-base.owl, kgr:hp.hp-full.json, kgr:hp.hp-full.obo, kgr:hp.hp-full.owl, kgr:hp.hp-international.json, kgr:hp.hp-international.obo, kgr:hp.hp-international.owl, kgr:hp.hp-simple-non-classified.json, kgr:hp.hp-simple-non-classified.obo, kgr:hp.hp-simple-non-classified.owl, kgr:hp.json, kgr:hp.obo, kgr:hp.owl, kgr:hp.phenotype.hpoa, kgr:hp.phenotype_to_genes.txt, kgr:icees-kg.graph, kgr:icees-kg.metadata, kgr:icees-kg.trapi, kgr:indra.cogex.code, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:mechreponet.kg, kgr:mondo.sssom, kgr:pheknowlator.graph, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:translator.hpoa.graph, kgr:ubkg.csv, kgr:ubkg.neo4j, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:name "Human Phenotype Ontology (HPO)" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:hpa a schema1:Aggregator ; rdfs:label "Human Protein Atlas" ; dcterms:created "2025-10-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Human Protein Atlas (HPA) is a Swedish-based program aiming to map all human proteins in cells, tissues and organs using an integration of various omics technologies, including antibody-based imaging, mass spectrometry-based proteomics, transcriptomics and systems biology. The HPA aggregates and presents data from eight different resources covering tissue, brain, single cell, subcellular, cancer, blood, cell line, and structure & interaction atlases." ; dcterms:identifier "hpa" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-10-09T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:hpa.api.json, kgr:hpa.api.rdf, kgr:hpa.api.tsv, kgr:hpa.api.xml, kgr:hpa.blood_protein, kgr:hpa.brain_rna, kgr:hpa.normal_tissue, kgr:hpa.pathology, kgr:hpa.portal, kgr:hpa.proteinatlas.json, kgr:hpa.proteinatlas.tsv, kgr:hpa.proteinatlas.xml, kgr:hpa.rna_celline, kgr:hpa.rna_immune_cell, kgr:hpa.rna_single_cell, kgr:hpa.rna_tissue, kgr:hpa.subcellular_location, kgr:pheknowlator.graph, kgr:spoke.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "hpa" ; schema1:name "Human Protein Atlas" ; doap:repository ; skos:inScheme "anatomy and development", "biomedical", "genomics", "health", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:hprd a schema1:Aggregator ; rdfs:label "HPRD" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Human Protein Reference Database (HPRD) was a comprehensive, manually curated collection of information on human proteins, including protein-protein interactions, post-translational modifications (PTMs), enzyme-substrate relationships, subcellular localization, tissue expression, and disease associations. Developed through collaboration between the Institute of Bioinformatics in Bangalore, India and Johns Hopkins University in Baltimore, USA, HPRD contained over 20,000 protein entries with more than 36,500 unique protein-protein interactions and 18,000 PTMs before being discontinued. The database served as a major resource for the human proteome from 2003 to approximately 2010." ; dcterms:identifier "hprd" ; dcterms:isReferencedBy , , , ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:hprd.genprot.viewer, kgr:hprd.phosphomotif.finder, kgr:hprd.ppi.data, kgr:hprd.tsv.download, kgr:hprd.xml.download, kgr:irefindex.database, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "HPRD" ; skos:inScheme "biological systems", "biomedical", "proteomics", "systems biology" ; adms:status "Inactive" ; foaf:homepage . kgr:hra a schema1:DataModel ; rdfs:label "Human Reference Atlas" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Human Reference Atlas (HRA) is a comprehensive 3D spatial framework and data model for mapping the healthy human body at single-cell resolution. The HRA provides reference anatomical structures, cell types, biomarkers, and standardized spatial coordinates to enable integration and analysis of diverse biological data types across multiple scales from organs to cells." ; dcterms:identifier "hra" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:hra.api, kgr:hra.data, kgr:hra.portal, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "hra" ; schema1:name "Human Reference Atlas" ; doap:repository ; skos:altLabel "HRA" ; skos:inScheme "anatomy and development", "biological systems", "biomedical", "health", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:hra-kg a schema1:KnowledgeGraph ; rdfs:label "Human Reference Atlas Knowledge Graph (HRA KG)" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The HRA Knowledge Graph (HRA KG) is a linked open data resource that integrates anatomical structures, cell types, and biomarkers to support cross-scale biological queries." ; dcterms:identifier "hra-kg" ; dcterms:license ; dcterms:modified "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:hra-kg.graph.json, kgr:hra-kg.graph.nq, kgr:hra-kg.graph.nt, kgr:hra-kg.graph.ttl, kgr:hra-kg.graph.xml ; schema1:name "Human Reference Atlas Knowledge Graph (HRA KG)" ; doap:repository ; skos:inScheme "anatomy and development", "biological systems", "biomedical", "health" ; adms:status "Active" ; foaf:homepage . kgr:hrpimp a schema1:DataSource ; rdfs:label "Human Reference Protein Interactome Mapping Project" ; dcterms:created "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Human Reference Protein Interactome Mapping Project (HRPIMP) is a systematic effort to map binary protein-protein interactions in human cells. The project produced the Human Reference Interactome (HuRI) database containing high-quality experimentally validated protein-protein interactions. Using systematic yeast two-hybrid (Y2H) screening approaches, HRPIMP mapped interactions for 9,094 proteins, identifying 64,006 binary protein-protein interactions. This comprehensive reference map of the human binary protein interactome provides essential data for understanding cellular mechanisms, disease pathways, and molecular networks. The data is freely available and has been integrated into multiple knowledge bases and research projects including studies of Alzheimer's Disease, cancer, and other complex diseases." ; dcterms:identifier "hrpimp" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:hrpimp.data, kgr:hrpimp.web ; schema1:name "Human Reference Protein Interactome Mapping Project" ; doap:repository ; skos:altLabel "HRPIMP", "HuRI", "Human Reference Interactome" ; skos:inScheme "biological systems", "biomedical", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:hsapdv a schema1:Ontology ; rdfs:label "Human Developmental Stages" ; dcterms:description "Life cycle stages for Human" ; dcterms:identifier "hsapdv" ; dcterms:license ; schema1:hasPart kgr:hsapdv.obo, kgr:hsapdv.owl, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Human Developmental Stages" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:hso a schema1:Ontology ; rdfs:label "Health Surveillance Ontology" ; dcterms:description "The health Surveillance Ontology (HSO) focuses on \"surveillance system level data\", that is, data outputs from surveillance activities, such as number of samples collected, cases observed, etc. It aims to support One-Health surveillance, covering animal health, public health and food safety surveillance." ; dcterms:identifier "hso" ; dcterms:license ; schema1:hasPart kgr:hso.owl ; schema1:name "Health Surveillance Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:htn a schema1:Ontology ; rdfs:label "Hypertension Ontology" ; dcterms:description "An ontology for representing clinical data about hypertension, intended to support classification of patients according to various diagnostic guidelines" ; dcterms:identifier "htn" ; dcterms:license ; schema1:hasPart kgr:htn.owl ; schema1:name "Hypertension Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:hubmap a schema1:Aggregator ; rdfs:label "HuBMAP" ; dcterms:created "2025-08-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Human BioMolecular Atlas Program (HuBMAP) is a transformative NIH Common Fund initiative dedicated to creating an open, global atlas of the human body at the cellular level. HuBMAP develops the tools, technology, and infrastructure needed to map healthy human tissues in unprecedented molecular detail." ; dcterms:identifier "hubmap" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-08-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:hubmap.antibody_validation_reports, kgr:hubmap.azimuth, kgr:hubmap.data_ingest_portal, kgr:hubmap.data_portal, kgr:hubmap.fusion, kgr:hubmap.human_reference_atlas, kgr:hubmap.vitessce, kgr:hubmap.workspaces, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "HuBMAP" ; doap:repository ; skos:inScheme "anatomy and development", "biological systems", "biomedical", "genomics", "health", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:humannet a schema1:DataSource ; rdfs:label "HumanNet" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "HumanNet is a probabilistic functional gene network for Homo sapiens that integrates genomic and proteomic data from multiple sources to predict functional relationships between genes. The network uses a modified Bayesian integration approach to combine evidence from diverse data types including protein-protein interactions, gene co-expression, phylogenetic profiling, and literature mining. HumanNet provides confidence scores for gene-gene functional linkages and can be used for gene function prediction, disease gene prioritization, and pathway analysis." ; dcterms:identifier "humannet" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:humannet.api, kgr:humannet.network, kgr:humannet.web, kgr:pharmkg.graph ; schema1:name "HumanNet" ; skos:altLabel "HumanNet", "humannet" ; skos:inScheme "biological systems", "biomedical", "genomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:huri a schema1:DataSource ; rdfs:label "HuRI" ; dcterms:created "2025-08-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Human Reference Interactome (HuRI) is a comprehensive map of binary protein-protein interactions in human cells, generated through systematic high-throughput yeast two-hybrid screening. HuRI provides the largest experimentally verified collection of human protein interactions and serves as a foundational resource for understanding cellular networks and disease mechanisms." ; dcterms:identifier "huri" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-08-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:bioteque.embeddings, kgr:huri.interactions, kgr:huri.literature_benchmark, kgr:huri.portal ; schema1:identifier "huri" ; schema1:name "HuRI" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:hydrologykg a schema1:KnowledgeGraph ; rdfs:label "SAWGraph Hydrology KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Hydrology KG is part of the SAWGraph (Safe Agricultural Products and Water Graph) project, providing structured data about hydrological systems and water resources." ; dcterms:identifier "hydrologykg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:hydrologykg.sparql ; schema1:name "SAWGraph Hydrology KG" ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:iao a schema1:Ontology ; rdfs:label "Information Artifact Ontology" ; dcterms:description "An ontology of information entities." ; dcterms:identifier "iao" ; dcterms:license ; schema1:hasPart kgr:chr.model.owl, kgr:efo.obo, kgr:efo.owl, kgr:iao.d-acts.owl, kgr:iao.dev.iao.owl, kgr:iao.ontology-metadata.owl, kgr:iao.owl ; schema1:name "Information Artifact Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:ibkh a schema1:KnowledgeGraph ; rdfs:label "integrative Biomedical Knowledge Hub" ; dcterms:created "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A comprehensive biomedical knowledge graph created by harmonizing and integrating information from diverse biomedical resources for biomedical discovery and drug repurposing." ; dcterms:identifier "ibkh" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ibkh.graph ; schema1:name "integrative Biomedical Knowledge Hub" ; skos:altLabel "iBKH" ; skos:inScheme "biomedical", "drug discovery", "health", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:icd10 a schema1:DataSource ; rdfs:label "ICD-10" ; dcterms:created "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The International Classification of Diseases, 10th Revision (ICD-10) is a standardized system for classifying diseases, injuries, and causes of death maintained by the World Health Organization (WHO). Originating in the 19th century with over 150 years of continuous development, ICD-10 came into effect on January 1, 1993, following adoption by the World Health Assembly in May 1990. ICD-10 provides a comprehensive hierarchical classification system with alphanumeric codes that allow systematic recording, analysis, interpretation, and comparison of mortality and morbidity data collected across countries and time periods. The system is used globally for health recording and statistics, including cause of death certification, morbidity coding in primary through tertiary care, resource allocation, reimbursement systems, quality and safety assessment, and epidemiological research. ICD-10 serves as the foundation for diagnostic-related grouping (DRG), cancer registries, and clinical trials that require standardized disease classification. The classification has been translated into dozens of languages and adapted by many countries for national use, with variants like ICD-10-CM (Clinical Modification) used in the United States and ICD-10-CA used in Canada. While ICD-11 officially came into effect in January 2022, ICD-10 remains widely used during the transition period as countries implement the newer revision. ICD-10 continues to be maintained with periodic updates and serves as the basis for various mapping projects to other terminology systems including SNOMED CT, MedDRA, and LOINC." ; dcterms:identifier "icd10" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:athena.mappings, kgr:icd10.browser, kgr:icd10.downloads, kgr:icd10.training, kgr:snomedct.icd10cm.map, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "icd10" ; schema1:name "ICD-10" ; doap:repository ; skos:altLabel "ICD-10", "ICD10", "International Classification of Diseases 10th Revision" ; skos:inScheme "clinical" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:who . kgr:icd10cm a schema1:Ontology ; rdfs:label "ICD-10-CM" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ICD-10-CM (International Classification of Diseases, 10th Revision, Clinical Modification) is a clinical modification of the WHO's ICD-10 system, providing diagnostic codes used for billing, epidemiology, and health management in the United States, with greater specificity than the international version." ; dcterms:identifier "icd10cm" ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:athena.mappings, kgr:icd10cm.tool ; schema1:identifier "icd10cm" ; schema1:name "ICD-10-CM" ; skos:altLabel "ICD-10-CM", "ICD10 Clinical Modification", "International Classification of Diseases, 10th Revision, Clinical Modification" ; skos:inScheme "clinical", "health" ; adms:status "Active" ; foaf:homepage . kgr:icees-kg a schema1:KnowledgeGraph ; rdfs:label "Exposures KP (icees-kg)" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Integrated Clinical and Environmental Exposures Service Knowledge Graph (ICEES KG) is a Translator Knowledge Provider that integrates patient-level clinical data from electronic health records with environmental exposures data including airborne pollutants, landfills, concentrated animal feeding operations, and socio-economic indicators. ICEES KG provides regulatory-compliant open access to integrated clinical and environmental data to support translational research on exposure-driven disease mechanisms and health disparities." ; dcterms:identifier "icees-kg" ; dcterms:isReferencedBy , ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:icees-kg.graph, kgr:icees-kg.metadata, kgr:icees-kg.trapi, kgr:translator.icees.graph ; schema1:identifier "icees-kg" ; schema1:name "Exposures KP (icees-kg)" ; doap:repository ; skos:inScheme "biomedical", "clinical", "health", "public health" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:iceo a schema1:Ontology ; rdfs:label "Integrative and Conjugative Element Ontology" ; dcterms:description "ICEO is an integrated biological ontology for the description of bacterial integrative and conjugative elements (ICEs)." ; dcterms:identifier "iceo" ; dcterms:license ; schema1:hasPart kgr:iceo.owl ; schema1:name "Integrative and Conjugative Element Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ico a schema1:Ontology ; rdfs:label "Informed Consent Ontology" ; dcterms:description "An ontology of clinical informed consents" ; dcterms:identifier "ico" ; dcterms:license ; schema1:hasPart kgr:ico.owl ; schema1:name "Informed Consent Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:identifier-mappings a schema1:KnowledgeGraph ; rdfs:label "ID Mappings" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ID Mappings is a FRINK-hosted subset of the Wikidata graph containing mappings between Wikidata entities and external identifiers expressed with standard RDF predicates such as skos:exactMatch, enabling consistent cross-reference and integration across knowledge bases." ; dcterms:identifier "identifier-mappings" ; dcterms:modified "2026-01-23T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:identifier-mappings.sparql, kgr:identifier-mappings.tpf ; schema1:name "ID Mappings" ; skos:inScheme "general" ; adms:status "Active" ; foaf:homepage . kgr:idisk a schema1:KnowledgeGraph ; rdfs:label "integrated Dietary Supplement Knowledge Base" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The integrated DIetary Supplements Knowledge base (iDISK) is a standardized knowledge base integrating dietary supplement information from multiple authoritative sources including ingredients, products, drug interactions, effectiveness, adverse effects, and therapeutic uses, represented according to established terminology principles with UMLS and MedDRA mappings." ; dcterms:identifier "idisk" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ibkh.graph ; schema1:identifier "idisk" ; schema1:name "integrated Dietary Supplement Knowledge Base" ; doap:repository ; skos:altLabel "iDISK" ; skos:inScheme "biomedical", "health", "nutrition", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:ido a schema1:Ontology ; rdfs:label "Infectious Disease Ontology" ; dcterms:description "A set of interoperable ontologies that will together provide coverage of the infectious disease domain. IDO core is the upper-level ontology that hosts terms of general relevance across the domain, while extension ontologies host terms to specific to a particular part of the domain." ; dcterms:identifier "ido" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:ido.owl ; schema1:name "Infectious Disease Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:idomal a schema1:Ontology ; rdfs:label "Malaria Ontology" ; dcterms:description "An application ontology to cover all aspects of malaria as well as the intervention attempts to control it." ; dcterms:identifier "idomal" ; dcterms:license ; schema1:hasPart kgr:idomal.obo, kgr:idomal.owl ; schema1:name "Malaria Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:iev a schema1:Ontology ; rdfs:label "Event (INOH pathway ontology)" ; dcterms:description "Description unavailable." ; dcterms:identifier "iev" ; dcterms:license "Not specified" ; schema1:name "Event (INOH pathway ontology)" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:ikraph a schema1:KnowledgeGraph ; rdfs:label "iKraph" ; dcterms:created "2025-07-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A large-scale biomedical knowledge graph assembled from PubMed abstracts, containing over 22 million entities and 120 million relations." ; dcterms:identifier "ikraph" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-07-22T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ikraph.code, kgr:ikraph.graph, kgr:ikraph.graphdata, kgr:ikraph.site ; schema1:name "iKraph" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "genomics", "health", "translational" ; adms:status "Active" ; foaf:homepage . kgr:imodulondb a schema1:DataSource ; rdfs:label "iModulonDB" ; dcterms:created "2025-11-06T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "iModulonDB is a knowledgebase of microbial transcriptional regulation derived from machine learning. It provides curated sets of iModulons - independently modulated groups of co-expressed genes identified through independent component analysis (ICA) of high-quality transcriptomic datasets - for prokaryotic organisms. The database offers interactive dashboards and analysis tools to explore transcriptional regulatory networks across multiple bacterial species, enabling researchers to understand gene regulation, discover new regulators, and analyze condition-specific cellular responses." ; dcterms:identifier "imodulondb" ; dcterms:isReferencedBy , ; dcterms:modified "2025-11-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:imodulondb.browser, kgr:imodulondb.datasets, kgr:imodulondb.imodulonminer, kgr:imodulondb.modulome_workflow, kgr:imodulondb.pymodulon ; schema1:name "iModulonDB" ; doap:repository ; skos:inScheme "microbiology", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:imr a schema1:Ontology ; rdfs:label "Molecule role (INOH Protein name/family name ontology)" ; dcterms:description "Description unavailable." ; dcterms:identifier "imr" ; dcterms:license "Not specified" ; schema1:name "Molecule role (INOH Protein name/family name ontology)" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:inchikey a schema1:DataModel ; rdfs:label "InChIKey" ; dcterms:created "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "InChIKey is a fixed-length hashed representation of the IUPAC International Chemical Identifier (InChI), used for indexing and linking chemical structures across resources." ; dcterms:identifier "inchikey" ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:inchikey.docs, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:name "InChIKey" ; skos:altLabel "IUPAC InChIKey", "InChI key" ; skos:inScheme "chemistry and biochemistry", "drug discovery" ; adms:status "Active" ; foaf:homepage . kgr:indra a schema1:Aggregator ; rdfs:label "INDRA" ; dcterms:created "2025-07-19T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly, produce causal graphs and dynamical models." ; dcterms:identifier "indra" ; dcterms:license ; dcterms:modified "2025-07-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:indra.api.cogex, kgr:indra.cogex.code, kgr:indra.discovery, kgr:indra.python ; schema1:name "INDRA" ; doap:repository ; skos:inScheme "biomedical", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:innatedb a schema1:DataSource ; rdfs:label "InnateDB" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "InnateDB is a publicly available database of genes, proteins, experimentally-verified interactions and signaling pathways involved in the innate immune response of humans, mice and bovines to microbial infection, with over 18,780 manually curated interactions and integrated bioinformatics and visualization tools for systems-level analysis." ; dcterms:identifier "innatedb" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:innatedb.downloads, kgr:innatedb.portal ; schema1:identifier "innatedb" ; schema1:name "InnateDB" ; skos:altLabel "InnateDB" ; skos:inScheme "biological systems", "immunology", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:ino a schema1:Ontology ; rdfs:label "Interaction Network Ontology" ; dcterms:description "An ontology of interactions and interaction networks" ; dcterms:identifier "ino" ; dcterms:license ; schema1:hasPart kgr:ino.owl ; schema1:name "Interaction Network Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:insight a schema1:KnowledgeGraph ; rdfs:label "INSIGHT" ; dcterms:created "2025-08-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "INSIGHT is an integrative knowledge graph resource designed to support translational and clinical informatics by linking heterogeneous biomedical entities (genes, variants, diseases, phenotypes, pathways, drugs, and clinical concepts) with provenance and harmonized semantics to enable multi-scale reasoning and decision support." ; dcterms:identifier "insight" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:insight.portal ; schema1:name "INSIGHT" ; skos:inScheme "biomedical", "clinical", "genomics", "systems biology", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:intact a schema1:Aggregator ; rdfs:label "IntAct" ; dcterms:created "2025-07-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "IntAct is an open, curated molecular interaction database maintained at EMBL‑EBI. It aggregates experimentally-derived interaction evidence from literature curation and direct submissions, and distributes data in PSI‑MI XML and MITAB formats along with curated datasets and documentation." ; dcterms:identifier "intact" ; dcterms:license ; dcterms:modified "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:automat.intact, kgr:bioteque.embeddings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:epigraphdb.graph, kgr:genecards.protein.interactions, kgr:intact.datasets, kgr:intact.docs.user-guide, kgr:intact.ftp.psi25, kgr:intact.ftp.psi30, kgr:intact.ftp.psimitab, kgr:intact.ftp.psimitab.all, kgr:intact.portal, kgr:irefindex.database, kgr:proteomehd.data, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:translator.intact.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "intact" ; schema1:name "IntAct" ; skos:inScheme "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:interpro a schema1:DataSource ; rdfs:label "InterPro" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "InterPro is a database of protein families, domains and functional sites in which identifiable features found in known proteins can be applied to unknown protein sequences." ; dcterms:identifier "interpro" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bioteque.embeddings, kgr:drugmechdb.graph, kgr:goa.mapping-files, kgr:interpro.api, kgr:interpro.entry_list, kgr:interpro.interpro2go, kgr:interpro.interproscan, kgr:interpro.match_complete, kgr:interpro.parent_child_tree, kgr:interpro.protein2ipr, kgr:interpro.uniparc_match, kgr:interpro.web, kgr:interpro.xml, kgr:kinace.portal, kgr:mechreponet.kg, kgr:obo-db-ingest.interpro.json, kgr:obo-db-ingest.interpro.obo, kgr:obo-db-ingest.interpro.owl, kgr:spoke.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:identifier "interpro" ; schema1:name "InterPro" ; doap:repository ; skos:inScheme "biological systems", "drug discovery", "genomics", "proteomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:ipr a schema1:Ontology ; rdfs:label "Protein Domains" ; dcterms:description "Description unavailable." ; dcterms:identifier "ipr" ; dcterms:license "Not specified" ; schema1:name "Protein Domains" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:iproclass a schema1:DataSource ; rdfs:label "iProClass" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "iProClass was an integrated protein classification database that provided comprehensive annotations by integrating information from UniProt, PIR, and multiple external databases including protein family, function, pathway, and interaction data." ; dcterms:identifier "iproclass" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:iproclass.pir-docs, kgr:iproclass.portal ; schema1:identifier "iproclass" ; schema1:name "iProClass" ; skos:altLabel "Integrated Protein Classification", "iProClass" ; skos:inScheme "proteomics" ; adms:status "Inactive" ; foaf:homepage . kgr:iptmnet a schema1:DataSource ; rdfs:label "iPTMnet" ; dcterms:created "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "iPTMnet is an integrated resource for protein post-translational modification (PTM) network discovery that employs an integrative bioinformatics approach combining text mining, data mining, and ontological representation to capture rich PTM information, including PTM enzyme-substrate-site relationships, PTM-specific protein-protein interactions (PPIs), and PTM conservation across species." ; dcterms:identifier "iptmnet" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kinace.portal ; schema1:identifier "iptmnet" ; schema1:name "iPTMnet" ; skos:inScheme "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:irefindex a schema1:Aggregator ; rdfs:label "iRefIndex" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "iRefIndex is a consolidated protein interaction database that aggregates and indexes interaction data from multiple primary databases using sequence-based hash keys to identify and group redundant interaction records while maintaining provenance information." ; dcterms:identifier "irefindex" ; dcterms:isReferencedBy , , ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:irefindex.database, kgr:irefindex.irefr, kgr:irefindex.irefscape, kgr:irefindex.irefweb ; schema1:identifier "irefindex" ; schema1:name "iRefIndex" ; skos:inScheme "biological systems", "proteomics" ; adms:status "Inactive" ; foaf:homepage . kgr:itis a schema1:DataSource ; rdfs:label "ITIS" ; dcterms:created "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Integrated Taxonomic Information System (ITIS) provides authoritative taxonomic information on plants, animals, fungi, and microbes of North America and the world. ITIS compiles standardized scientific names, common names, taxonomic serial numbers (TSNs), hierarchical classification, and associated metadata curated through interagency and international collaboration to support biodiversity data integration, ecological research, regulatory processes, and interoperability across biological information systems." ; dcterms:identifier "itis" ; dcterms:license ; dcterms:modified "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:itis.api, kgr:itis.download, kgr:itis.portal, kgr:obo-db-ingest.itis.json, kgr:obo-db-ingest.itis.obo, kgr:obo-db-ingest.itis.owl ; schema1:name "ITIS" ; skos:inScheme "environment", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:kegg a schema1:DataSource ; rdfs:label "KEGG" ; dcterms:created "2025-03-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Kyoto Encyclopedia of Genes and Genomes (KEGG) is a database resource for understanding high-level functions and utilities of the biological system, such as the cell, the organism and the ecosystem, from molecular-level information, especially large-scale molecular datasets generated by genome sequencing and other high-throughput experimental technologies." ; dcterms:identifier "kegg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , , , , , , ; schema1:hasPart kgr:ibkh.graph, kgr:kegg.annotation, kgr:kegg.api, kgr:kegg.blastkoala, kgr:kegg.brite, kgr:kegg.compound, kgr:kegg.disease, kgr:kegg.drug, kgr:kegg.genes, kgr:kegg.genome, kgr:kegg.glycan, kgr:kegg.mapper, kgr:kegg.medicus, kgr:kegg.module, kgr:kegg.orthology, kgr:kegg.pathway, kgr:kegg.pathway.kgml, kgr:kegg.reaction, kgr:kegg.syntax, kgr:kegg.web, kgr:kegg.webapps, kgr:kinace.portal, kgr:obo-db-ingest.bigg.metabolite.sssom.tsv, kgr:obo-db-ingest.kegg.genome.json, kgr:obo-db-ingest.kegg.genome.obo, kgr:obo-db-ingest.kegg.genome.owl, kgr:obo-db-ingest.rhea.sssom.tsv, kgr:rampdb.database, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:spoke.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:ttd.kegg-pathways, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "kegg" ; schema1:name "KEGG" ; skos:inScheme "biological systems", "chemistry and biochemistry", "drug discovery", "genomics", "health", "pathways", "pharmacology", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:kg-alzheimers a schema1:KnowledgeGraph ; rdfs:label "KG-Alzheimers" ; dcterms:created "2025-03-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Knowledge Graph for integrating data related to Alzheimer's disease, supporting Retrieval-Augmented Generation (RAG) and AI assistant development for Alzheimer's disease research." ; dcterms:identifier "kg-alzheimers" ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:kg-alzheimers.graph ; schema1:name "KG-Alzheimers" ; doap:repository ; skos:inScheme "biomedical", "health", "neuroscience" ; adms:status "Active" ; foaf:homepage . kgr:kg-covid-19 a schema1:KnowledgeGraph ; rdfs:label "KG-COVID-19" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge graph for COVID-19 and SARS-COV-2." ; dcterms:identifier "kg-covid-19" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kg-covid-19.graph ; schema1:name "KG-COVID-19" ; doap:repository ; skos:inScheme "health", "microbiology", "organisms", "public health" ; adms:status "Active" ; foaf:homepage . kgr:kg-ebi-gene2pheno a schema1:KnowledgeGraph ; rdfs:label "EBI Gene2Phenotype KG" ; dcterms:created "2025-05-07T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "An ingest of EMBL-EBI's Gene2Phenotype resource, for Translator use (output in Translator standards and NodeNormed, using own custom pipeline)" ; dcterms:identifier "kg-ebi-gene2pheno" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kg-ebi-gene2pheno.edges.kgx, kgr:kg-ebi-gene2pheno.edges.trapi, kgr:kg-ebi-gene2pheno.nodes.kgx ; schema1:name "EBI Gene2Phenotype KG" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" . kgr:kg-enp a schema1:KnowledgeGraph ; rdfs:label "kg-enp" ; dcterms:created "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ENP-KG is a specialized knowledge graph for experimental natural products discovery and characterization. It integrates chemical spectroscopy data, natural product structures, and organism information to support drug discovery research and chemical ecology applications. The knowledge graph provides a unified platform for exploring relationships between organisms and their secondary metabolites." ; dcterms:identifier "kg-enp" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kg-enp.portal ; schema1:name "kg-enp" ; doap:repository ; skos:inScheme "drug discovery", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:kg-idg a schema1:KnowledgeGraph ; rdfs:label "KG-IDG" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "a Knowledge Graph for Illuminating the Druggable Genome" ; dcterms:identifier "kg-idg" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kg-idg.graph ; schema1:name "KG-IDG" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:kg-jensenlab-diseases a schema1:KnowledgeGraph ; rdfs:label "JensenLab DISEASES KG" ; dcterms:created "2025-05-06T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "An ingest of Jensen Lab's DISEASES resource, for Translator use (output in Translator standards and NodeNormed, using own custom pipeline)" ; dcterms:identifier "kg-jensenlab-diseases" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kg-jensenlab-diseases.edges.kgx, kgr:kg-jensenlab-diseases.edges.trapi, kgr:kg-jensenlab-diseases.nodes.kgx ; schema1:name "JensenLab DISEASES KG" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" . kgr:kg-microbe a schema1:KnowledgeGraph ; rdfs:label "KG Microbe" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Knowledge Graph about microbes. The KG is designed to integrate diverse knowledge about microbes from a variety of structured and unstructured sources." ; dcterms:identifier "kg-microbe" ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:kg-microbe.graph.uniprot ; schema1:name "KG Microbe" ; doap:repository ; skos:inScheme "biological systems", "microbiology", "microbiome", "organisms", "phenotype" ; adms:status "Active" ; foaf:homepage . kgr:kg-monarch a schema1:KnowledgeGraph ; rdfs:label "KG Monarch" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Monarch Initiative is an international consortium that leads key global standards and semantic data integration technologies. To maximize utility and impact, the Monarch platform is composed of multiple open-source, open-access components." ; dcterms:identifier "kg-monarch" ; dcterms:license ; dcterms:modified "2026-02-20T23:00:44+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cpathkg.code, kgr:epigraphdb.graph, kgr:kg-monarch.associations.all, kgr:kg-monarch.associations.causal_gene_to_disease, kgr:kg-monarch.associations.chemical_or_drug_to_disease, kgr:kg-monarch.associations.chemical_to_disease, kgr:kg-monarch.associations.chemical_to_pathway, kgr:kg-monarch.associations.correlated_gene_to_disease, kgr:kg-monarch.associations.disease_to_inheritance, kgr:kg-monarch.associations.disease_to_location, kgr:kg-monarch.associations.disease_to_phenotype, kgr:kg-monarch.associations.gene_to_expression_site, kgr:kg-monarch.associations.gene_to_gene_homology, kgr:kg-monarch.associations.gene_to_pathway, kgr:kg-monarch.associations.gene_to_phenotype, kgr:kg-monarch.associations.genotype_to_disease, kgr:kg-monarch.associations.genotype_to_gene, kgr:kg-monarch.associations.genotype_to_phenotype, kgr:kg-monarch.associations.genotype_to_variant, kgr:kg-monarch.associations.macromolecular_machine_to_biological_process, kgr:kg-monarch.associations.macromolecular_machine_to_cellular_component, kgr:kg-monarch.associations.macromolecular_machine_to_molecular_activity, kgr:kg-monarch.associations.pairwise_gene_to_gene_interaction, kgr:kg-monarch.associations.variant_to_disease, kgr:kg-monarch.associations.variant_to_gene, kgr:kg-monarch.associations.variant_to_phenotype, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:kg-monarch.phenio.semsql, kgr:kg-monarch.solr ; schema1:name "KG Monarch" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:monarchinitiative . kgr:kg-predict a schema1:KnowledgeGraph ; rdfs:label "KG-Predict" ; dcterms:created "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "KG-Predict is a knowledge graph computational framework for drug repurposing that integrates multiple types of genotypic and phenotypic data. The framework constructs GP-KG (Genotype-Phenotype Knowledge Graph), containing 1,246,726 associations between 61,146 biomedical entities from various databases. KG-Predict uses graph embedding methods to learn low-dimensional representations of entities and relations, enabling inference of new drug-disease interactions. The system has been validated for identifying repositioned candidate drugs, particularly for Alzheimer's disease, achieving high performance metrics (AUROC = 0.981, AUPR = 0.409) and successfully prioritizing FDA-approved and clinical trial anti-AD drugs." ; dcterms:identifier "kg-predict" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:kg-predict.ad_predictions, kgr:kg-predict.code, kgr:kg-predict.gpkg ; schema1:name "KG-Predict" ; skos:altLabel "GP-KG", "GPKG-Predict" ; skos:inScheme "biomedical", "drug discovery", "genomics", "pharmacology", "phenotype", "systems biology", "translational" ; adms:status "Active" ; foaf:homepage . kgr:kgcl a schema1:DataModel ; rdfs:label "Knowledge Graph Change Language" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A data model for describing change operations at a high level on an ontology or ontology-like artefact, such as a Knowledge Graph. KGCL enables standardized representation of changes in ontologies and knowledge graphs for tracking, auditing, and reproducibility. It provides a formal language for representing and documenting changes in knowledge graphs, facilitating version control, change history, and collaboration." ; dcterms:hasVersion "0.7.0" ; dcterms:identifier "kgcl" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-08-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kgcl.model.jsonld, kgr:kgcl.model.owl, kgr:kgcl.model.shacl, kgr:kgcl.model.yaml, kgr:kgcl.python ; schema1:name "Knowledge Graph Change Language" ; doap:repository ; skos:inScheme "information technology" ; adms:status "Active" ; foaf:homepage . kgr:kidsfirst a schema1:DataSource ; rdfs:label "Kids First Data Resource Center" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Gabriella Miller Kids First Pediatric Research Program Data Resource Center (Kids First DRC) provides researchers access to genomic and clinical data from pediatric cancer and structural birth defect cohorts to accelerate discovery and development of more effective treatments." ; dcterms:identifier "kidsfirst" ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:kidsfirst.cavatica, kgr:kidsfirst.pedcbioportal, kgr:kidsfirst.portal, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Kids First Data Resource Center" ; doap:repository ; skos:inScheme "biomedical", "clinical", "genomics", "health" ; adms:status "Active" ; foaf:homepage . kgr:kinace a schema1:Aggregator ; rdfs:label "KinAce" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The KinAce web portal aggregates and visualizes the network of interactions between protein kinases and their substrates in the human genome. KinAce integrates data from multiple sources including PhosphoSitePlus, iPTMnet, EPSD, KinHub, CORAL, Dark Kinase Knowledgebase, UniProt, HGNC, KEGG, and InterPro, providing comprehensive phosphorylation site data and kinase-substrate relationships." ; dcterms:identifier "kinace" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:kinace.portal ; schema1:identifier "kinace" ; schema1:name "KinAce" ; skos:altLabel "KinAce" ; skos:inScheme "biological systems", "biomedical", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:kinhub a schema1:DataSource ; rdfs:label "KinHub" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A comprehensive resource for human protein kinases featuring KinMap, an interactive web-based tool for visualizing and annotating the human kinome tree, integrating biochemical, structural, and disease association data with a unified naming scheme" ; dcterms:identifier "kinhub" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:kinace.portal, kgr:kinhub.kinases-list, kgr:kinhub.kinmap, kgr:kinhub.portal ; schema1:name "KinHub" ; skos:altLabel "Human Kinase Hub", "Human Protein Kinases Hub" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:kinomescan a schema1:DataSource ; rdfs:label "KINOMEscan" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "KINOMEscan is a biochemical kinase profiling assay that measures drug binding using a panel of approximately 440 purified kinases. The HMS LINCS Project provides a comprehensive table of all small molecules in the HMS LINCS collection that have been profiled by KINOMEscan, with links to raw binding data." ; dcterms:identifier "kinomescan" ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kinomescan.portal, kgr:kinomescan.spreadsheet ; schema1:identifier "kinomescan" ; schema1:name "KINOMEscan" ; skos:altLabel "HMS LINCS KINOMEscan" ; skos:inScheme "biomedical", "drug discovery", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:kisao a schema1:Ontology ; rdfs:label "Kinetic Simulation Algorithm Ontology" ; dcterms:description "A classification of algorithms for simulating biology, their parameters, and their outputs" ; dcterms:identifier "kisao" ; dcterms:license ; schema1:hasPart kgr:kisao.owl ; schema1:name "Kinetic Simulation Algorithm Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:knowwheregraph a schema1:KnowledgeGraph ; rdfs:label "KnowWhereGraph" ; dcterms:created "2025-12-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "KnowWhereGraph is a large-scale geospatial and environmental knowledge graph containing over 29 billion RDF triples. It fuses knowledge graph technology with geo-enrichment capabilities to provide location-centric answers about environmental and human systems globally. The graph integrates 30+ data layers spanning natural hazards, climate, soil properties, demographics, health, agriculture, and more." ; dcterms:identifier "knowwheregraph" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:knowwheregraph.explorer, kgr:knowwheregraph.graph, kgr:knowwheregraph.ontology, kgr:knowwheregraph.sparql ; schema1:identifier "knowwheregraph" ; schema1:name "KnowWhereGraph" ; doap:repository ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ucsb-geography . kgr:labo a schema1:Ontology ; rdfs:label "clinical LABoratory Ontology" ; dcterms:description "LABO is an ontology of informational entities formalizing clinical laboratory tests prescriptions and reporting documents." ; dcterms:identifier "labo" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:labo.owl ; schema1:name "clinical LABoratory Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:lepao a schema1:Ontology ; rdfs:label "Lepidoptera Anatomy Ontology" ; dcterms:description "The Lepidoptera Anatomy Ontology contains terms used for describing the anatomy and phenotype of moths and butterflies in biodiversity research. LEPAO is developed in part by BIOfid (The Specialised Information Service Biodiversity Research)." ; dcterms:identifier "lepao" ; dcterms:license ; schema1:hasPart kgr:lepao.obo, kgr:lepao.owl ; schema1:name "Lepidoptera Anatomy Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:lincs a schema1:DataSource ; rdfs:label "LINCS" ; dcterms:created "2025-05-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Library of Integrated Network-based Cellular Signatures (LINCS) is a comprehensive collection of data that catalogs how human cells globally respond to chemical, genetic, and disease perturbations. It aims to better understand human disease and advance the development of new therapies by assembling an integrated picture of the range of responses of human cells exposed to many perturbations." ; dcterms:identifier "lincs" ; dcterms:isReferencedBy , , ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:lincs.api, kgr:lincs.portal, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "lincs" ; schema1:name "LINCS" ; skos:inScheme "biomedical", "drug discovery", "genomics", "precision medicine", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:lincs-l1000 a schema1:DataSource ; rdfs:label "LINCS L1000" ; dcterms:created "2025-01-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The LINCS L1000 is a high-throughput, reduced representation gene expression profiling assay developed as part of the NIH Library of Integrated Network-Based Cellular Signatures (LINCS) Program. L1000 directly measures 978 landmark genes and computationally infers the expression of 11,350 additional genes, enabling cost-effective large-scale transcriptional profiling at approximately $2 per sample. The technology was developed to create a Connectivity Map (CMap) that catalogs cellular responses to genetic and chemical perturbations, facilitating drug discovery, mechanism of action determination, and functional annotation of genetic variants. The LINCS L1000 dataset comprises over 1.3 million gene expression profiles representing responses to 19,811 chemical compounds, genetic perturbations targeting 5,075 genes (via shRNA knockdowns and cDNA overexpression), and 314 biologics across multiple cell lines and time points." ; dcterms:identifier "lincs-l1000" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:lincs-l1000.clue, kgr:lincs-l1000.cmap, kgr:lincs-l1000.geo, kgr:spoke.graph ; schema1:name "LINCS L1000" ; doap:repository ; skos:inScheme "drug discovery" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:broad . kgr:lipro a schema1:Ontology ; rdfs:label "Lipid Ontology" ; dcterms:description "An ontology representation of the LIPIDMAPS nomenclature classification." ; dcterms:identifier "lipro" ; dcterms:license "Not specified" ; schema1:name "Lipid Ontology" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" . kgr:litvar a schema1:DataSource ; rdfs:label "LitVar" ; dcterms:created "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "LitVar is a comprehensive NCBI web service for searching and retrieving variant-specific information from the biomedical literature using advanced text mining and machine learning techniques. Developed by the National Library of Medicine's Computational Biology Branch, LitVar automatically extracts variant-related information from over 35 million PubMed articles and 5.7 million full-text articles in PubMed Central including supplementary materials, with monthly updates to capture the latest research. A key innovation of LitVar is its sophisticated variant normalization system that standardizes different forms of the same variant into unique identifiers, enabling comprehensive search results regardless of which variant nomenclature is used in the query, whether protein level names, DNA level annotations, dbSNP RS identifiers, ClinGen identifiers, or SPDI format. LitVar leverages PubTator, a state-of-the-art literature annotation tool, to identify and display key biological entities including genes, diseases, drugs, chemicals, and mutations within retrieved articles, providing rich contextual information around variants of interest." ; dcterms:identifier "litvar" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:litvar.api, kgr:litvar.web_interface ; schema1:identifier "litvar" ; schema1:name "LitVar" ; skos:inScheme "genomics", "literature" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:lncbase a schema1:DataSource ; rdfs:label "DIANA-LncBase" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "DIANA-LncBase is a comprehensive repository of experimentally supported miRNA-lncRNA interactions. Version 3.0 contains ~500,000 entries corresponding to ~240,000 unique tissue and cell type specific miRNA-lncRNA pairs in human and mouse. Data derived from manual curation and analysis of >300 high-throughput datasets including AGO-CLIP-Seq, microarrays, and low-yield experiments across 192 cell types and 51 tissues. Includes lncRNA expression profiles and subcellular localization data." ; dcterms:identifier "lncbase" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:lncbase.correlation-viz, kgr:lncbase.expression-viz, kgr:lncbase.portal, kgr:lncbase.ucsc-browser, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "DIANA-LncBase" ; skos:altLabel "DIANA LncBase", "LncBase" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:lncbook a schema1:DataSource ; rdfs:label "LncBook" ; dcterms:created "2019-01-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "LncBook is a comprehensive database of human long non-coding RNAs (lncRNAs) with multi-omics annotations. It accommodates 95,243 lncRNA genes and 323,950 transcripts, integrated from multiple resources including GENCODE, RefLnc, CHESS, FANTOM-CAT, and BIGTranscriptome, with strict quality control and curation. The database provides abundant annotations including conservation features across 40 vertebrates, disease/trait-associated variants, DNA methylation profiles, expression profiles across 9 biological contexts, lncRNA-encoded small proteins, lncRNA-protein interactions, and lncRNA-miRNA interactions." ; dcterms:identifier "lncbook" ; dcterms:isReferencedBy , ; dcterms:modified "2025-10-21T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:lncbook.blast, kgr:lncbook.classification, kgr:lncbook.conservation, kgr:lncbook.conversion, kgr:lncbook.downloads, kgr:lncbook.expression, kgr:lncbook.interaction, kgr:lncbook.lgc, kgr:lncbook.methylation, kgr:lncbook.portal, kgr:lncbook.sprotein, kgr:lncbook.statistics, kgr:lncbook.variation, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "LncBook" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:lncipedia a schema1:DataSource ; rdfs:label "LncIPedia" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "LncIPedia is a comprehensive public database for human long non-coding RNA (lncRNA) sequences and annotations, containing manually curated literature and detailed transcript information." ; dcterms:identifier "lncipedia" ; dcterms:isReferencedBy , , ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:lncipedia.downloads, kgr:lncipedia.igv, kgr:lncipedia.metadata, kgr:lncipedia.search, kgr:lncipedia.trackhub, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "LncIPedia" ; skos:inScheme "genomics", "literature" ; adms:status "Active" ; foaf:homepage . kgr:lncrnadb a schema1:DataSource ; rdfs:label "lncRNAdb" ; dcterms:created "2010-11-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A reference database for long noncoding RNAs (lncRNAs) that have been shown to have, or be associated with, biological functions in eukaryotes. Contained over 150 lncRNAs from around 60 different species with comprehensive annotations including sequences, structural information, genomic context, expression, subcellular localization, conservation, and functional evidence." ; dcterms:identifier "lncrnadb" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-21T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:lncrnadb.export, kgr:lncrnadb.nred-integration, kgr:lncrnadb.portal, kgr:lncrnadb.search, kgr:lncrnadb.submit, kgr:lncrnadb.ucsc-integration, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "lncRNAdb" ; skos:inScheme "biological systems", "genomics" ; adms:status "Inactive" ; foaf:homepage . kgr:lncrnalyzr a schema1:KnowledgeGraph ; rdfs:label "lncRNAlyzr" ; dcterms:created "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "lncRNAlyzr is a specialized knowledge graph focused on long non-coding RNA (lncRNA) biology, integrating lncRNA annotations, expression profiles, functional interactions, disease associations, and regulatory mechanisms to provide comprehensive insights into lncRNA roles in cellular processes and human disease." ; dcterms:identifier "lncrnalyzr" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:lncrnalyzr.api, kgr:lncrnalyzr.graph, kgr:lncrnalyzr.portal ; schema1:name "lncRNAlyzr" ; doap:repository ; skos:inScheme "biomedical", "genomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:loggerhead a schema1:Ontology ; rdfs:label "Loggerhead nesting" ; dcterms:description "Description unavailable." ; dcterms:identifier "loggerhead" ; dcterms:license "Not specified" ; schema1:name "Loggerhead nesting" ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:loinc a schema1:DataModel ; rdfs:label "LOINC" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "LOINC (Logical Observation Identifiers Names and Codes) is the international standard for identifying health measurements, laboratory and clinical observations, and documents; it provides universal codes and structured names enabling interoperable exchange and aggregation of clinical, laboratory, and other health data worldwide." ; dcterms:identifier "loinc" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:athena.mappings, kgr:loinc.api.fhir, kgr:loinc.archive, kgr:loinc.complete, kgr:loinc.principles, kgr:loinc.web, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "loinc" ; schema1:name "LOINC" ; skos:inScheme "biomedical", "clinical", "genomics", "health" ; adms:status "Active" ; foaf:homepage . kgr:m-csa a schema1:DataSource ; rdfs:label "M-CSA" ; dcterms:created "2025-03-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Mechanism and Catalytic Site Atlas (M-CSA) is a database of enzyme reaction mechanisms. It provides annotation on the protein, catalytic residues, cofactors, and the reaction mechanisms of hundreds of enzymes. There are two kinds of entries in M-CSA. 'Detailed mechanism' entries are more complete and show the individual chemical steps of the mechanism as schemes with electron flow arrows. 'Catalytic Site' entries annotate the catalytic residues necessary for the reaction, but do not show the mechanism." ; dcterms:identifier "m-csa" ; dcterms:license ; dcterms:modified "2025-08-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:obo-db-ingest.rhea.sssom.tsv ; schema1:name "M-CSA" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ma a schema1:Ontology ; rdfs:label "Mouse adult gross anatomy" ; dcterms:description "A structured controlled vocabulary of the adult anatomy of the mouse (Mus)." ; dcterms:identifier "ma" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:ma.obo, kgr:ma.owl ; schema1:name "Mouse adult gross anatomy" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:malacards a schema1:Aggregator ; rdfs:label "MalaCards" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MalaCards is a comprehensive, searchable database integrating information about human diseases from 78 data sources. It provides integrated disease annotations including genes, symptoms, drugs, mutations, publications, clinical trials, and pathways for over 22,000 human disorders." ; dcterms:identifier "malacards" ; dcterms:isReferencedBy , ; dcterms:modified "2025-10-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:genecards.disease.associations, kgr:malacards.archive, kgr:malacards.categories, kgr:malacards.portal, kgr:malacards.search, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "MalaCards" ; skos:inScheme "biomedical", "clinical", "genomics", "health" ; adms:status "Active" . kgr:mamo a schema1:Ontology ; rdfs:label "Mathematical modeling ontology" ; dcterms:description "The Mathematical Modelling Ontology (MAMO) is a classification of the types of mathematical models used mostly in the life sciences, their variables, relationships and other relevant features." ; dcterms:identifier "mamo" ; dcterms:license ; schema1:hasPart kgr:mamo.owl ; schema1:name "Mathematical modeling ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Orphaned" ; foaf:homepage . kgr:mangal a schema1:KnowledgeGraph ; rdfs:label "mangal.io" ; dcterms:created "2025-12-15T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "mangal.io is a collaborative database and analysis platform for ecological networks, providing a comprehensive collection of species interaction networks (food webs, pollination networks, plant-herbivore networks) with tools for visualization, analysis, and reuse of published ecological data." ; dcterms:identifier "mangal" ; dcterms:license ; dcterms:modified "2025-12-15T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:mangal.api, kgr:mangal.docs, kgr:mangal.portal ; schema1:name "mangal.io" ; adms:status "Active" ; foaf:homepage . kgr:mao a schema1:Ontology ; rdfs:label "Multiple alignment" ; dcterms:description "Description unavailable." ; dcterms:identifier "mao" ; dcterms:license "Not specified" ; schema1:name "Multiple alignment" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:mat a schema1:Ontology ; rdfs:label "Minimal anatomical terminology" ; dcterms:description "Description unavailable." ; dcterms:identifier "mat" ; dcterms:license "Not specified" ; schema1:name "Minimal anatomical terminology" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" . kgr:maxo a schema1:Ontology ; rdfs:label "Medical Action Ontology" ; dcterms:description "The Medical Action Ontology (MAxO) provides a broad view of medical actions and includes terms for medical procedures, interventions, therapies, treatments, and recommendations." ; dcterms:identifier "maxo" ; dcterms:license ; schema1:hasPart kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:maxo.json, kgr:maxo.maxo-base.json, kgr:maxo.maxo-base.obo, kgr:maxo.maxo-base.owl, kgr:maxo.obo, kgr:maxo.owl ; schema1:name "Medical Action Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mco a schema1:Ontology ; rdfs:label "Microbial Conditions Ontology" ; dcterms:description "Microbial Conditions Ontology is an ontology..." ; dcterms:identifier "mco" ; dcterms:license ; schema1:hasPart kgr:mco.obo, kgr:mco.owl ; schema1:name "Microbial Conditions Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mcro a schema1:Ontology ; rdfs:label "Model Card Report Ontology" ; dcterms:description "An ontology representing the structure of model card reports - reports that describe basic characteristics of machine learning models for the public and consumers." ; dcterms:identifier "mcro" ; dcterms:license ; schema1:hasPart kgr:mcro.owl ; schema1:name "Model Card Report Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mechreponet a schema1:KnowledgeGraph ; rdfs:label "MechRepoNet" ; dcterms:created "2022-04-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MechRepoNet (Mechanistic Repositioning Network) is a knowledge graph that integrates multiple biomedical data sources to support drug repositioning via mechanistic inference." ; dcterms:identifier "mechreponet" ; dcterms:isReferencedBy ; dcterms:modified "2025-07-17T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:mechreponet.code, kgr:mechreponet.kg, kgr:mind.entities, kgr:mind.relations, kgr:mind.test, kgr:mind.train, kgr:mind.valid ; schema1:name "MechRepoNet" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "pharmacology", "translational" ; adms:status "Active" ; foaf:homepage . kgr:medgen a schema1:Aggregator ; rdfs:label "MedGen" ; dcterms:created "2010-01-01T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "NCBI's portal to information about conditions, phenotypes, and findings in humans related to medical genetics. Aggregates and organizes data from multiple authoritative sources including UMLS, OMIM, HPO, Mondo, Orphanet, GeneReviews, PharmGKB, and community submissions to GTR and ClinVar. Each concept is assigned a distinct Concept Unique Identifier (CUI) and integrated with related information from clinical resources, genetic testing registries, medical literature, and molecular resources." ; dcterms:identifier "medgen" ; dcterms:modified "2025-10-21T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:medgen.csv, kgr:medgen.cui-history, kgr:medgen.faq, kgr:medgen.help, kgr:medgen.hpo-history, kgr:medgen.hpo-mapping, kgr:medgen.hpo-omim-mapping, kgr:medgen.id-mappings, kgr:medgen.merged, kgr:medgen.mgconso, kgr:medgen.mgdef, kgr:medgen.mgrel, kgr:medgen.mgsat, kgr:medgen.mgsty, kgr:medgen.mondo-history, kgr:medgen.names, kgr:medgen.ordo-history, kgr:medgen.portal, kgr:medgen.pubmed-links, kgr:medgen.readme, kgr:medgen.search, kgr:medgen.sources, kgr:ncbigene.mim2gene_medgen, kgr:pheknowlator.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "medgen" ; schema1:name "MedGen" ; skos:inScheme "biomedical", "clinical", "genomics", "health" ; adms:status "Active" ; foaf:homepage . kgr:medi a schema1:DataSource ; rdfs:label "MeDI" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MEDI (MATRIX Indication List) is a curated dataset of drug indications and contraindications extracted from FDA DailyMed product labels using large language models. Developed by the Every Cure organization, MEDI provides ground truth data for drug repurposing predictive models by mapping drug-indication and drug-contraindication relationships with standardized disease ontology terms (MONDO)." ; dcterms:identifier "medi" ; dcterms:license ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:medi.github, kgr:medi.release ; schema1:identifier "medi" ; schema1:name "MeDI" ; doap:repository ; skos:inScheme "clinical", "drug discovery", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:mediadive a schema1:DataSource ; rdfs:label "MediaDive" ; dcterms:created "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MediaDive is the world's largest collection of microbial cultivation media, maintained by DSMZ (German Collection of Microorganisms and Cell Cultures). It provides comprehensive information about media compositions, solutions, ingredients, and growth conditions for over 47,000 microbial strains including bacteria, archaea, fungi, protists, and algae." ; dcterms:identifier "mediadive" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw ; schema1:name "MediaDive" ; skos:altLabel "DSMZ MediaDive", "Media Diversity", "MediaDive" ; skos:inScheme "biological systems", "microbiology", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:medkg a schema1:KnowledgeGraph ; rdfs:label "MedKG" ; dcterms:created "2025-03-24T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MedKG is a comprehensive and continuously updated knowledge graph designed to address challenges in precision medicine and drug discovery. MedKG integrates data from 35 authoritative sources, encompassing 34 node types and 79 relationships. A Continuous Integration/Continuous Update pipeline ensures MedKG remains current, addressing a critical limitation of static knowledge bases. The integration of molecular embeddings enhances semantic analysis capabilities, bridging the gap between chemical structures and biological entities." ; dcterms:identifier "medkg" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:medkb.site ; schema1:name "MedKG" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:medlineplus a schema1:DataSource ; rdfs:label "MedlinePlus" ; dcterms:created "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MedlinePlus is the premier online health information resource from the National Library of Medicine, providing comprehensive, trusted health and wellness information for patients, families, and the general public. As a service of the world's largest medical library and part of the National Institutes of Health, MedlinePlus delivers high-quality, evidence-based health content that is easy to understand, free of advertising, and available in both English and Spanish. The resource covers over 1,000 health topics including diseases, conditions, wellness information, and prevention strategies, with content organized into multiple categories including health topics, medical encyclopedia, drugs and supplements information, medical tests, healthy recipes, and genetics resources. MedlinePlus provides detailed information on prescription drugs, over-the-counter medicines, herbs, and supplements through its comprehensive drug information database. The medical encyclopedia contains thousands of articles, images, and videos covering diseases, symptoms, tests, and treatments. MedlinePlus Genetics offers information on genetic conditions, genes, chromosomes, and how genetic variations affect health." ; dcterms:identifier "medlineplus" ; dcterms:modified "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:medlineplus.connect_api, kgr:medlineplus.genetics_api, kgr:medlineplus.web_service, kgr:medlineplus.website, kgr:medlineplus.xml_files ; schema1:identifier "medlineplus" ; schema1:name "MedlinePlus" ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:mesh a schema1:Ontology ; rdfs:label "Medical Subject Headings (MeSH)" ; dcterms:created "2025-10-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Medical Subject Headings (MeSH) is a hierarchically-organized controlled vocabulary produced by the National Library of Medicine (NLM). It serves as the standard thesaurus for indexing and cataloging biomedical and health-related information in MEDLINE/PubMed and other NLM databases." ; dcterms:identifier "mesh" ; dcterms:license ; dcterms:modified "2025-10-10T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:athena.mappings, kgr:drugmechdb.graph, kgr:forum.graph.dump, kgr:icees-kg.graph, kgr:icees-kg.metadata, kgr:icees-kg.trapi, kgr:mesh.api.eutilities, kgr:mesh.api.rdf, kgr:mesh.ascii, kgr:mesh.browser, kgr:mesh.documentation, kgr:mesh.marc, kgr:mesh.ondemand, kgr:mesh.rdf, kgr:mesh.sparql.editor, kgr:mesh.xml, kgr:microbiomekg.api, kgr:pharmkg.graph, kgr:spoke.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "mesh" ; schema1:name "Medical Subject Headings (MeSH)" ; doap:repository ; skos:inScheme "biomedical", "health", "literature" ; adms:status "Active" ; foaf:homepage . kgr:metacyc a schema1:DataSource ; rdfs:label "MetaCyc" ; dcterms:created "2025-03-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MetaCyc is a curated database of experimentally elucidated metabolic pathways from all domains of life. MetaCyc contains pathways involved in both primary and secondary metabolism, as well as associated metabolites, reactions, enzymes, and genes. The goal of MetaCyc is to catalog the universe of metabolism by storing a representative sample of each experimentally elucidated pathway." ; dcterms:identifier "metacyc" ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:obo-db-ingest.rhea.sssom.tsv, kgr:spoke.graph ; schema1:identifier "metacyc" ; schema1:name "MetaCyc" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:metanetx a schema1:DataSource ; rdfs:label "MetaNetX" ; dcterms:created "2025-05-07T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MetaNetX is an online platform for accessing, analyzing, and manipulating genome-scale metabolic networks (GSM) and biochemical pathways, integrating data from multiple sources with a unified namespace for metabolites and biochemical reactions." ; dcterms:identifier "metanetx" ; dcterms:isReferencedBy , , , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:metanetx.mnxref.metabolites, kgr:metanetx.mnxref.reactions, kgr:metanetx.rdf, kgr:metanetx.site, kgr:metanetx.sparql ; schema1:name "MetaNetX" ; skos:inScheme "biological systems", "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:sib . kgr:metpo a schema1:Ontology ; rdfs:label "METPO (Microbial Ecophysiological Trait and Phenotype Ontology)" ; dcterms:created "2025-11-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "METPO (Microbial Ecophysiological Trait and Phenotype Ontology) is an ontology for describing microbial ecophysiological traits and phenotypes relevant to microbial ecology and environmental systems biology." ; dcterms:identifier "metpo" ; dcterms:license ; dcterms:modified "2026-01-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:metpo.owl ; schema1:name "METPO (Microbial Ecophysiological Trait and Phenotype Ontology)" ; doap:repository ; skos:altLabel "METPO", "Microbial Ecophysiological Trait and Phenotype Ontology" ; skos:inScheme "biological systems", "microbiology", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:berkeleybop . kgr:mf a schema1:Ontology ; rdfs:label "Mental Functioning Ontology" ; dcterms:description "The Mental Functioning Ontology is an overarching ontology for all aspects of mental functioning." ; dcterms:identifier "mf" ; dcterms:license ; schema1:hasPart kgr:mf.owl ; schema1:name "Mental Functioning Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mfmo a schema1:Ontology ; rdfs:label "Mammalian Feeding Muscle Ontology" ; dcterms:description "The Mammalian Feeding Muscle Ontology is an antomy ontology for the muscles of the head and neck that participate in feeding, swallowing, and other oral-pharyngeal behaviors." ; dcterms:identifier "mfmo" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:mfmo.owl ; schema1:name "Mammalian Feeding Muscle Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:mfo a schema1:Ontology ; rdfs:label "Medaka fish anatomy and development" ; dcterms:description "A structured controlled vocabulary of the anatomy and development of the Japanese medaka fish, Oryzias latipes." ; dcterms:identifier "mfo" ; dcterms:license "Not specified" ; schema1:about ; schema1:hasPart kgr:mfo.owl ; schema1:name "Medaka fish anatomy and development" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" . kgr:mfoem a schema1:Ontology ; rdfs:label "Emotion Ontology" ; dcterms:description "An ontology of affective phenomena such as emotions, moods, appraisals and subjective feelings." ; dcterms:identifier "mfoem" ; dcterms:license ; schema1:hasPart kgr:mfoem.owl ; schema1:name "Emotion Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mfomd a schema1:Ontology ; rdfs:label "Mental Disease Ontology" ; dcterms:description "An ontology to describe and classify mental diseases such as schizophrenia, annotated with DSM-IV and ICD codes where applicable" ; dcterms:identifier "mfomd" ; dcterms:license ; schema1:hasPart kgr:mfomd.owl ; schema1:name "Mental Disease Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mgd a schema1:Aggregator ; rdfs:label "Mouse Genome Database" ; dcterms:created "2025-01-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Mouse Genome Database (MGD) is the international database resource for the laboratory mouse serving as the authoritative source of integrated genetic, genomic, and biological data to facilitate the study of human health and disease through mouse models. Developed and maintained by the Mouse Genome Informatics consortium at The Jackson Laboratory, MGD provides comprehensive information on mouse genes, genome features, mammalian orthology, phenotypes, allelic variants, disease models, and extensive curated experimental data. The database integrates multiple specialized resources including the Gene Expression Database documenting spatial and temporal patterns of gene expression during mouse development and adulthood, the Mouse Models of Human Cancer database cataloging spontaneous and induced tumors, and extensive phenotype annotations using the Mammalian Phenotype Ontology. MGD contains curated data for all mouse genes with standardized nomenclature, genomic coordinates, functional annotations from Gene Ontology, expression patterns, phenotype associations, human disease connections, and literature references. The resource supports comparative genomics by providing detailed orthology relationships between mouse and human genes enabling translation of findings between species for biomedical research. MGD offers sophisticated search interfaces for genes, phenotypes, alleles, strains, polymorphisms including dramatically expanded SNP data, recombinase activity patterns for cre lines, and RNA-seq experiments, along with genome browsers, batch query tools, and data downloads in various formats. The database integrates data from high-throughput projects including the International Mouse Phenotyping Consortium systematic knockout phenotyping and Ensembl regulatory annotations. With over 30 years of continuous development since its 1994 web release, MGD collaborates with the Alliance of Genome Resources to harmonize model organism data and serves as an essential resource for the global mouse research community providing standardized, expert-curated knowledge." ; dcterms:identifier "mgd" ; dcterms:isReferencedBy , ; dcterms:modified "2025-01-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , ; schema1:hasPart kgr:disgenet.data, kgr:mgd.downloads, kgr:mgd.gxd, kgr:mgd.mousemine, kgr:mgd.portal ; schema1:identifier "mgi" ; schema1:name "Mouse Genome Database" ; doap:repository ; skos:altLabel "MGD", "MGI", "Mouse Genome Database", "Mouse Genome Informatics" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage . kgr:mgmlink a schema1:KnowledgeGraph ; rdfs:label "MGMLink" ; dcterms:created "2025-04-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A knowledge graph of linked microbes, genes and metabolites." ; dcterms:identifier "mgmlink" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:mgmlink.code ; schema1:name "MGMLink" ; skos:inScheme "biological systems", "microbiology" ; adms:status "Active" . kgr:mgnify a schema1:Aggregator ; rdfs:label "MGnify" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MGnify is an active aggregator and analysis platform for microbiome and metagenomic data, providing tools for submission, analysis, visualization, and discovery of microbiome datasets from diverse biomes and environments. It is operated by EMBL-EBI and is an ELIXIR Core Data Resource." ; dcterms:identifier "mgnify" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:mgnify.api, kgr:mgnify.docs, kgr:mgnify.ftp, kgr:mgnify.genomes, kgr:mgnify.portal, kgr:mgnify.proteins, kgr:mgnify.training, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "MGnify" ; skos:inScheme "biological systems", "clinical", "environment", "genomics" ; adms:status "Active" . kgr:mi a schema1:Ontology ; rdfs:label "Molecular Interactions Controlled Vocabulary" ; dcterms:description "A structured controlled vocabulary for the annotation of experiments concerned with protein-protein interactions." ; dcterms:identifier "mi" ; dcterms:license ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:mi.obo, kgr:mi.owl, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Molecular Interactions Controlled Vocabulary" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:miapa a schema1:Ontology ; rdfs:label "MIAPA Ontology" ; dcterms:description "An application ontology to formalize annotation of phylogenetic data." ; dcterms:identifier "miapa" ; dcterms:license ; schema1:hasPart kgr:miapa.owl ; schema1:name "MIAPA Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:micro a schema1:Ontology ; rdfs:label "Ontology of Prokaryotic Phenotypic and Metabolic Characters" ; dcterms:description "An ontology of prokaryotic phenotypic and metabolic characters" ; dcterms:identifier "micro" ; dcterms:license ; schema1:hasPart kgr:micro.owl ; schema1:name "Ontology of Prokaryotic Phenotypic and Metabolic Characters" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:microbiomekg a schema1:KnowledgeGraph ; rdfs:label "MicrobiomeKG" ; dcterms:created "2025-08-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MicrobiomeKG is an integrative knowledge graph resource for multi-omics microbiome data linking microbial taxa, genes, metabolites, host phenotypes, pathways, and clinical variables to support systems biology analyses and translational research." ; dcterms:identifier "microbiomekg" ; dcterms:isReferencedBy ; dcterms:modified "2025-08-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:microbiomekg.api ; schema1:name "MicrobiomeKG" ; skos:inScheme "biomedical", "microbiome", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:mind a schema1:KnowledgeGraph ; rdfs:label "MIND" ; dcterms:created "2025-07-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Mechanistic Repositioning Network with Indications (MIND) is a knowledge graph incorporating two biomedical resources: MechRepoNet and DrugCentral. MechRepoNet is a knowledge graph comprising of 18 biomedical resources that reflects and expands on important drug mechanism relationships identified from a curated biomedical drug mechanism dataset. MIND was created by mapping DrugCentral edges to existing MechRepoNet nodes through the Unified Medical Language System (UMLS) and Medical Subject Headings (MeSH). The MIND training set has a total of 9,651,040 edges." ; dcterms:identifier "mind" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:mind.entities, kgr:mind.relations, kgr:mind.test, kgr:mind.train, kgr:mind.valid ; schema1:name "MIND" ; doap:repository ; skos:inScheme "biomedical", "drug discovery" ; adms:status "Active" ; foaf:homepage . kgr:mint a schema1:Aggregator ; rdfs:label "Mint" ; dcterms:created "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MINT (The Molecular INTeraction database) is a public and open source database focusing on experimentally verified protein-protein interactions mined from the scientific literature by expert curators. Molecular interactions are annotated according to international PSI-MI standards and follow the PSI-MI controlled vocabulary. MINT is a founder and main member of the IMEx consortium and provides data that is integrated into the IntAct database as part of a single non-redundant open access dataset. As an ELIXIR Core Data Resource and Global Core Biodata Resource, MINT contains over 139,000 interactions involving 27,800+ interactors from 676 organisms extracted from 6,500+ publications." ; dcterms:identifier "mint" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:irefindex.database, kgr:mint.advanced.search, kgr:mint.mitab.all, kgr:mint.mitab.human, kgr:mint.mitab.mouse, kgr:mint.portal, kgr:mint.psicquic, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "Mint" ; skos:altLabel "MINT", "Molecular INTeraction Database" ; skos:inScheme "biological systems", "biomedical", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:mirbase a schema1:Aggregator ; rdfs:label "miRBase" ; dcterms:created "2004-01-01T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "miRBase is the primary online repository for microRNA sequences and annotations, serving as the central registry for microRNA nomenclature and providing a comprehensive archive of published microRNA data including sequences, annotations, predicted targets, and deep sequencing evidence." ; dcterms:identifier "mirbase" ; dcterms:isReferencedBy , , , , , ; dcterms:modified "2025-10-21T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:mirbase.ath-gff3, kgr:mirbase.browse, kgr:mirbase.cel-gff3, kgr:mirbase.dead, kgr:mirbase.diff, kgr:mirbase.dme-gff3, kgr:mirbase.dre-gff3, kgr:mirbase.ftp, kgr:mirbase.genomic-search, kgr:mirbase.hairpin-fa, kgr:mirbase.help, kgr:mirbase.hsa-gff3, kgr:mirbase.mature-fa, kgr:mirbase.mirna-dat, kgr:mirbase.mmu-gff3, kgr:mirbase.portal, kgr:mirbase.readme, kgr:mirbase.rno-gff3, kgr:mirbase.tissue-search, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:identifier "mirbase" ; schema1:name "miRBase" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:mirgate a schema1:DataSource ; rdfs:label "miRGate" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "miRGate is a curated database of computationally predicted and experimentally validated miRNA-mRNA target pairs for human, mouse, and rat. The database integrates multiple prediction algorithms and includes sequences for both miRNAs and mRNA 3'-UTRs, along with experimentally validated data from four well-known databases. miRGate provides computational predictions using well-established algorithms and offers both a web interface and a REST API for programmatic access." ; dcterms:identifier "mirgate" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-17T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , ; schema1:hasPart kgr:mirgate.api, kgr:mirgate.portal ; schema1:identifier "mirgate" ; schema1:name "miRGate" ; skos:altLabel "miRGate" ; skos:inScheme "biomedical", "genomics" ; adms:status "unresponsive" ; foaf:homepage . kgr:mirgenedb a schema1:DataSource ; rdfs:label "MirGeneDB" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MirGeneDB is a manually curated database of microRNA genes, providing validated and annotated microRNA gene entries for over 21,000 genes from 114 metazoan species. It offers uniform nomenclature, evolutionary context, and downloadable data for all species and families." ; dcterms:identifier "mirgenedb" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:mirgenedb.bulk, kgr:mirgenedb.covariance, kgr:mirgenedb.info, kgr:mirgenedb.portal, kgr:mirgenedb.reads, kgr:mirgenedb.species_downloads, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "MirGeneDB" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" . kgr:mirnao a schema1:Ontology ; rdfs:label "microRNA Ontology" ; dcterms:description "An application ontology for use with miRNA databases." ; dcterms:identifier "mirnao" ; dcterms:license ; schema1:hasPart kgr:mirnao.owl ; schema1:name "microRNA Ontology" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:miro a schema1:Ontology ; rdfs:label "Mosquito insecticide resistance" ; dcterms:description "Application ontology for entities related to insecticide resistance in mosquitos" ; dcterms:identifier "miro" ; dcterms:license "Not specified" ; schema1:about ; schema1:hasPart kgr:miro.obo, kgr:miro.owl ; schema1:name "Mosquito insecticide resistance" ; doap:repository ; skos:inScheme "environment" ; adms:status "Inactive" ; foaf:homepage . kgr:mirtarbase a schema1:DataSource ; rdfs:label "miRTarBase" ; dcterms:created "2025-07-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "miRTarBase is a comprehensive database of experimentally validated microRNA-target interactions (MTIs). It collects and curates miRNA-target interactions with experimental evidence from the literature, including data from reporter assays, western blot, qPCR, microarray, and high-throughput experiments such as CLIP-Seq." ; dcterms:identifier "mirtarbase" ; dcterms:isReferencedBy , ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:mechreponet.kg, kgr:mirtarbase.archive, kgr:mirtarbase.mti, kgr:mirtarbase.portal, kgr:mirtarbase.species_mti, kgr:mirtarbase.strong_evidence, kgr:mirtarbase.target_sites ; schema1:name "miRTarBase" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" . kgr:mixs a schema1:DataModel ; rdfs:label "MIxS" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MIxS, or the Minimum Information about any (X) Sequence is a standard for describing the contextual information about the sampling and sequencing of any genomic sequence. The standard has Terms that describe characteristics of a sample that addresses: What is the source of the sequence? In what kind of environment was the sample collected? What methods were utilized to process the sample?" ; dcterms:identifier "mixs" ; dcterms:license ; dcterms:modified "2025-09-27T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:mixs.model ; schema1:name "MIxS" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:mmo a schema1:Ontology ; rdfs:label "Measurement method ontology" ; dcterms:description "A representation of the variety of methods used to make clinical and phenotype measurements." ; dcterms:identifier "mmo" ; dcterms:license ; schema1:hasPart kgr:mmo.obo, kgr:mmo.owl ; schema1:name "Measurement method ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mmusdv a schema1:Ontology ; rdfs:label "Mouse Developmental Stages" ; dcterms:description "Life cycle stages for Mus Musculus" ; dcterms:identifier "mmusdv" ; dcterms:license ; schema1:hasPart kgr:mmusdv.obo, kgr:mmusdv.owl ; schema1:name "Mouse Developmental Stages" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:mo a schema1:Ontology ; rdfs:label "Microarray experimental conditions" ; dcterms:description "A standardized description of a microarray experiment in support of MAGE v.1." ; dcterms:identifier "mo" ; dcterms:license "Not specified" ; schema1:hasPart kgr:mo.owl ; schema1:name "Microarray experimental conditions" ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:mod a schema1:Ontology ; rdfs:label "Protein modification" ; dcterms:description "PSI-MOD is an ontology consisting of terms that describe protein chemical modifications" ; dcterms:identifier "mod" ; dcterms:license ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:mod.obo, kgr:mod.owl ; schema1:name "Protein modification" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:modomics a schema1:DataSource ; rdfs:label "MODOMICS" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MODOMICS is a comprehensive database of RNA modifications that provides detailed information about the chemical structures of modified ribonucleosides, their biosynthetic pathways, the location of modified residues in RNA sequences, RNA modifying enzymes, and associated human diseases." ; dcterms:identifier "modomics" ; dcterms:isReferencedBy , ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:modomics.annotation, kgr:modomics.api, kgr:modomics.help, kgr:modomics.images, kgr:modomics.mol2, kgr:modomics.n3, kgr:modomics.owl, kgr:modomics.pdb, kgr:modomics.portal, kgr:modomics.positions, kgr:modomics.sdf, kgr:modomics.search, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "MODOMICS" ; skos:inScheme "biological systems", "chemistry and biochemistry", "genomics" ; adms:status "Active" . kgr:molecular-data-kp a schema1:KnowledgeGraph ; rdfs:label "MolePro" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MolePro is a Molecular Data Provider translating molecular scale to systems scale through a Reasoner API. It is a Translator Knowledge Provider." ; dcterms:identifier "molecular-data-kp" ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:molecular-data-kp.api, kgr:molecular-data-kp.graph.edges, kgr:molecular-data-kp.graph.nodes ; schema1:name "MolePro" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:molepro a schema1:Aggregator ; rdfs:label "Molecular Data Provider" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Molecular Data Provider (MolePro) is part of the NCATS Biomedical Data Translator project, integrating diverse chemical biology data sources into a curated framework for chemical entities and their effects on biological targets. MolePro consolidates information from over two dozen public chemical biology datasets, portals, and tools, providing comprehensive insights into compounds, protein targets, and similarity-based connections through both a custom API and TRAPI interface." ; dcterms:identifier "molepro" ; dcterms:modified "2025-11-17T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:molepro.api, kgr:molepro.catalog, kgr:molepro.trapi ; schema1:identifier "molepro" ; schema1:name "Molecular Data Provider" ; doap:repository ; skos:altLabel "MolePro", "Molecular Data Provider" ; skos:inScheme "biomedical", "chemistry and biochemistry", "drug discovery", "pharmacology", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:broad . kgr:mondo a schema1:Ontology ; rdfs:label "Mondo Disease Ontology" ; dcterms:description "A global community effort to harmonize multiple disease resources to yield a coherent merged ontology." ; dcterms:identifier "mondo" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:drug-approvals-kp.graph.edges, kgr:drug-approvals-kp.graph.nodes, kgr:efo.obo, kgr:efo.owl, kgr:epigraphdb.graph, kgr:icees-kg.graph, kgr:icees-kg.metadata, kgr:icees-kg.trapi, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:microbiomekg.api, kgr:mondo.json, kgr:mondo.mondo-base.owl, kgr:mondo.mondo-simple.owl, kgr:mondo.obo, kgr:mondo.owl, kgr:mondo.sssom, kgr:pheknowlator.graph, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Mondo Disease Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mop a schema1:Ontology ; rdfs:label "Molecular Process Ontology" ; dcterms:description "Processes at the molecular level" ; dcterms:identifier "mop" ; dcterms:license ; schema1:hasPart kgr:mop.owl ; schema1:name "Molecular Process Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:motrpac a schema1:DataSource ; rdfs:label "Molecular Transducers of Physical Activity Consortium (MoTrPAC) Data Hub" ; dcterms:created "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Molecular Transducers of Physical Activity Consortium (MoTrPAC) Data Hub is a national research initiative that generates a comprehensive molecular map of the effects of exercise and physical activity training. The data repository provides multi-omics datasets documenting molecular changes from exercise across multiple tissues, including transcriptomics, proteomics, metabolomics, and epigenomics data. The complete young adult rat endurance training dataset is publicly available, featuring quantitative results and analyses from 20 tissues across 29 assays and 5 time points, studying male and female animals. The data hub provides both browsable study data and pre-bundled datasets organized by tissue type and omics platform, all released under CC BY 4.0 license. The resource includes phenotypic data, sample-level metadata, quality control metrics, and quantitative results to enable comprehensive analysis of the temporal dynamics of multi-omic responses to endurance exercise training." ; dcterms:identifier "motrpac" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:motrpac.data-browser, kgr:motrpac.data-hub, kgr:motrpac.epigenomics, kgr:motrpac.metabolomics-targeted, kgr:motrpac.metabolomics-untargeted, kgr:motrpac.phenotype, kgr:motrpac.proteomics-targeted, kgr:motrpac.proteomics-untargeted, kgr:motrpac.transcriptomics, kgr:motrpac.video-tutorials, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Molecular Transducers of Physical Activity Consortium (MoTrPAC) Data Hub" ; skos:inScheme "biological systems", "genomics", "health", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:mousemine a schema1:Aggregator ; rdfs:label "MouseMine" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MouseMine is an InterMine data warehouse that provides integrated access to mouse genomic, phenotypic, expression, and disease data from Mouse Genome Informatics (MGI)." ; dcterms:identifier "mousemine" ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:mousemine.api, kgr:mousemine.querybuilder, kgr:mousemine.templates, kgr:mousemine.web ; schema1:identifier "mousemine" ; schema1:name "MouseMine" ; skos:altLabel "Mouse Genome Informatics MouseMine", "MouseMine" ; skos:inScheme "genomics", "health", "organisms", "pathways", "phenotype" ; adms:status "Active" ; foaf:homepage . kgr:mp a schema1:Ontology ; rdfs:label "Mammalian Phenotype Ontology" ; dcterms:description "Standard terms for annotating mammalian phenotypic data." ; dcterms:identifier "mp" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:mp.json, kgr:mp.mp-base.owl, kgr:mp.obo, kgr:mp.owl, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Mammalian Phenotype Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:mpath a schema1:Ontology ; rdfs:label "Mouse pathology ontology" ; dcterms:description "A structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes" ; dcterms:identifier "mpath" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:mpath.owl ; schema1:name "Mouse pathology ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mpio a schema1:Ontology ; rdfs:label "Minimum PDDI Information Ontology" ; dcterms:description "An ontology of minimum information regarding potential drug-drug interaction information." ; dcterms:identifier "mpio" ; dcterms:license ; schema1:hasPart kgr:mpio.owl ; schema1:name "Minimum PDDI Information Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:mrbase a schema1:DataSource ; rdfs:label "MR-Base" ; dcterms:created "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "MR-Base is a platform that integrates a large database of harmonized GWAS summary association datasets with analytical tools (web apps and R packages) to support systematic two-sample Mendelian randomization (2SMR) and phenome-wide causal inference across the human phenome." ; dcterms:identifier "mrbase" ; dcterms:modified "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:epigraphdb.graph, kgr:mrbase.api, kgr:mrbase.home, kgr:mrbase.mrinstruments, kgr:mrbase.paper.reproducibility, kgr:mrbase.phewas, kgr:mrbase.twosamplemr, kgr:mrbase.twosamplemr.docs, kgr:mrbase.webapp ; schema1:name "MR-Base" ; skos:inScheme "biomedical", "genomics", "health", "investigations" ; adms:status "Active" ; foaf:homepage . kgr:mro a schema1:Ontology ; rdfs:label "MHC Restriction Ontology" ; dcterms:description "An ontology for Major Histocompatibility Complex (MHC) restriction in experiments" ; dcterms:identifier "mro" ; dcterms:license ; schema1:hasPart kgr:mro.owl ; schema1:name "MHC Restriction Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:ms a schema1:Ontology ; rdfs:label "Mass spectrometry ontology" ; dcterms:description "A structured controlled vocabulary for the annotation of experiments concerned with proteomics mass spectrometry." ; dcterms:identifier "ms" ; dcterms:license ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:ms.obo, kgr:ms.owl ; schema1:name "Mass spectrometry ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:msigdb a schema1:DataSource ; rdfs:label "Molecular Signatures Database" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Molecular Signatures Database (MSigDB) is a comprehensive collection of tens of thousands of annotated gene sets for use with Gene Set Enrichment Analysis (GSEA) software. MSigDB includes curated gene sets from pathway databases, gene ontology annotations, hallmark gene sets, immunologic signatures, regulatory target sets, and cell type-specific signatures derived from single-cell sequencing studies. Available for both human and mouse." ; dcterms:identifier "msigdb" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:msigdb.browser, kgr:msigdb.downloads.human, kgr:msigdb.downloads.mouse, kgr:msigdb.gene_families, kgr:msigdb.investigate, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "msigdb" ; schema1:name "Molecular Signatures Database" ; skos:altLabel "MSigDB" ; skos:inScheme "genomics", "pathways", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:multiomics-kp a schema1:KnowledgeGraph ; rdfs:label "Multiomics KP" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Translator Knowledge Provider incorporating multiomics data." ; dcterms:identifier "multiomics-kp" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:multiomics-kp.code, kgr:multiomics-kp.docs ; schema1:name "Multiomics KP" ; skos:inScheme "health" ; adms:status "Active" . kgr:mutationds a schema1:DataSource ; rdfs:label "Catalog of Validated Oncogenic Mutations" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Catalog of Validated Oncogenic Mutations is part of the Cancer Genome Interpreter and contains a compiled inventory of mutations in cancer genes that are demonstrated to drive tumor growth or predispose to cancer, combining data from DoCM, ClinVar, OncoKB, and experimental assays." ; dcterms:identifier "mutationds" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph ; schema1:name "Catalog of Validated Oncogenic Mutations" ; skos:altLabel "CGI Mutations", "MutationDS" ; skos:inScheme "biomedical", "genomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:cgi-team . kgr:mw a schema1:DataSource ; rdfs:label "Metabolomics Workbench" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Metabolomics Workbench is a public repository for metabolomics data and metadata, serving as the National Metabolomics Data Repository (NMDR). It provides tools, protocols, training, and access to over 2,000 metabolomics studies containing data from more than 75,000 samples and 32,000 known metabolites. Funded by the NIH Common Fund from 2012-2022." ; dcterms:identifier "mw" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Metabolomics Workbench" ; skos:altLabel "MW", "NMDR", "National Metabolomics Data Repository" ; adms:status "Active" ; foaf:homepage . kgr:namsnetwork a schema1:KnowledgeGraph ; rdfs:label "NAMs Network" ; dcterms:created "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "NAMs.network is the first database of regulatory-relevant New Approach Methodologies (NAMs) for assessing the safety of materials and chemicals. Given the ethical, economic, and time-related challenges associated with animal testing, as well as emerging bans on such methods in the EU, it is paramount to develop and validate alternative in silico, in chemico, in vitro, and ex vivo approaches. NAMs.network provides state-of-the-art knowledge on different NAMs for materials and chemical safety assessment." ; dcterms:identifier "namsnetwork" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:namsnetwork.portal ; schema1:name "NAMs Network" ; skos:inScheme "chemistry and biochemistry", "general", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:nanopublications a schema1:DataModel ; rdfs:label "Nanopublications Network" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Nanopublications are a format for publishing scientific claims as small, machine-readable, FAIR digital objects using RDF semantic web technology. Each nanopublication consists of three parts - an assertion, provenance metadata, and publication info - forming minimal publishable information units that can be cited, queried, and reused." ; dcterms:identifier "nanopublications" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:nanopublications.portal, kgr:nanopublications.servers ; schema1:identifier "nanopublications" ; schema1:name "Nanopublications Network" ; doap:repository ; skos:altLabel "Nanopublications", "Nanopubs" ; adms:status "Active" ; foaf:homepage . kgr:nasa-gesdisc-kg a schema1:KnowledgeGraph ; rdfs:label "NASA-GESDISC-KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The NASA Knowledge Graph Dataset is an expansive graph-based dataset designed to integrate and interconnect information about satellite datasets, scientific publications, instruments, platforms, projects, data centers, and science keywords. This knowledge graph is particularly focused on datasets managed by NASA's Distributed Active Archive Centers (DAACs), which are NASA's data repositories responsible for archiving and distributing scientific data. In addition to NASA DAACs, the graph includes datasets from 184 data providers worldwide, including various government agencies and academic institutions." ; dcterms:identifier "nasa-gesdisc-kg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:nasa-gesdisc-kg.sparql ; schema1:name "NASA-GESDISC-KG" ; skos:inScheme "environment", "investigations" ; adms:status "Active" ; foaf:homepage . kgr:nbo a schema1:Ontology ; rdfs:label "Neuro Behavior Ontology" ; dcterms:description "An ontology of human and animal behaviours and behavioural phenotypes" ; dcterms:identifier "nbo" ; dcterms:license ; schema1:hasPart kgr:nbo.owl ; schema1:name "Neuro Behavior Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ncatsgardkg a schema1:KnowledgeGraph ; rdfs:label "NCATS GARD KG" ; dcterms:created "2025-07-11T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The NCATS GARD Knowledge Graph integrates data about rare diseases, creating a comprehensive resource for rare disease research and drug discovery. It leverages clustering and machine learning approaches to identify relationships between rare diseases and potential therapeutic targets." ; dcterms:identifier "ncatsgardkg" ; dcterms:isReferencedBy , ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:ncatsgardkg.code, kgr:ncatsgardkg.raw-data ; schema1:name "NCATS GARD KG" ; doap:repository ; skos:inScheme "biomedical", "clinical", "genomics", "health" ; adms:status "Active" ; foaf:homepage . kgr:ncbigene a schema1:DataSource ; rdfs:label "NCBI Gene" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "NCBI Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide." ; dcterms:identifier "ncbigene" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:aop-db.data, kgr:biogrid.identifiers, kgr:genecards.gene.annotations, kgr:microbiomekg.api, kgr:ncbigene.gene2accession, kgr:ncbigene.gene2ensembl, kgr:ncbigene.gene2go, kgr:ncbigene.gene2pubmed, kgr:ncbigene.gene2refseq, kgr:ncbigene.gene_group, kgr:ncbigene.gene_history, kgr:ncbigene.gene_info, kgr:ncbigene.gene_neighbors, kgr:ncbigene.gene_orthologs, kgr:ncbigene.gene_refseq_uniprotkb_collab, kgr:ncbigene.gene_summary, kgr:ncbigene.mim2gene_medgen, kgr:ncbigene.search, kgr:omim.mim2gene, kgr:pharmkg.graph, kgr:pheknowlator.graph, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:spoke.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "ncbi-gene" ; schema1:name "NCBI Gene" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:ncbitaxon a schema1:Ontology ; rdfs:label "NCBI organismal classification" ; dcterms:description "An ontology representation of the NCBI organismal taxonomy" ; dcterms:identifier "ncbitaxon" ; dcterms:license ; schema1:hasPart kgr:chr.model.owl, kgr:drugmechdb.graph, kgr:efo.obo, kgr:efo.owl, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:mechreponet.kg, kgr:microbiomekg.api, kgr:ncbitaxon.json, kgr:ncbitaxon.obo, kgr:ncbitaxon.owl, kgr:ncbitaxon.subsets.taxslim-disjoint-over-in-taxon.owl, kgr:ncbitaxon.subsets.taxslim.owl, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:spoke.graph ; schema1:name "NCBI organismal classification" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ncit a schema1:Ontology ; rdfs:label "NCI Thesaurus OBO Edition" ; dcterms:description "NCI Thesaurus (NCIt)is a reference terminology that includes broad coverage of the cancer domain, including cancer related diseases, findings and abnormalities. The NCIt OBO Edition aims to increase integration of the NCIt with OBO Library ontologies. NCIt OBO Edition releases should be considered experimental." ; dcterms:identifier "ncit" ; dcterms:license ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:microbiomekg.api, kgr:ncit.obo, kgr:ncit.owl ; schema1:name "NCI Thesaurus OBO Edition" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:ncro a schema1:Ontology ; rdfs:label "Non-Coding RNA Ontology" ; dcterms:description "An ontology for non-coding RNA, both of biological origin, and engineered." ; dcterms:identifier "ncro" ; dcterms:license ; schema1:hasPart kgr:ncro.dev.ncro.owl ; schema1:name "Non-Coding RNA Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:ndcd a schema1:DataSource ; rdfs:label "National Drug Code Directory" ; dcterms:created "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The FDA National Drug Code Directory is a comprehensive database maintained by the U.S. Food and Drug Administration containing information about finished drug products, unfinished drugs, and compounded drug products. Drug establishments are required to provide FDA with current lists of all drugs using unique three-segment National Drug Code (NDC) numbers. The directory includes prescription and over-the-counter drugs, approved and unapproved drugs, and repackaged and relabeled drugs. The database is updated daily and provides essential drug identification and regulatory information for healthcare professionals, researchers, and regulatory compliance." ; dcterms:identifier "ndcd" ; dcterms:modified "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:ndcd.api, kgr:ndcd.excel, kgr:ndcd.search, kgr:ndcd.text ; schema1:identifier "ndcd" ; schema1:name "National Drug Code Directory" ; skos:altLabel "NDC Directory", "NDCD" ; skos:inScheme "biomedical", "clinical", "drug discovery", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:nde a schema1:KnowledgeGraph ; rdfs:label "NIAID Data Ecosystem KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The NDE (NIAID Data Ecosystem) KG contains infectious and immune-mediated disease datasets. These include datasets from NIAID-funded repositories as well as globally-relevant infectious and immune-mediated disease (IID) repositories from NIH and beyond. The datasets include -omics data, clinical data, epidemiological data, pathogen-host interaction data, flow cytometry, and imaging." ; dcterms:identifier "nde" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:nde.sparql ; schema1:name "NIAID Data Ecosystem KG" ; skos:inScheme "biomedical", "health", "immunology" ; adms:status "Active" ; foaf:homepage . kgr:ndfrt a schema1:DataSource ; rdfs:label "Veterans Health Administration National Drug File" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Veterans Health Administration National Drug File (VANDF) is a comprehensive drug terminology containing approximately 27,921 clinical drugs, 8,058 ingredients, and 578 drug classes. It is maintained by the Department of Veterans Affairs and distributed through UMLS and RxNorm." ; dcterms:identifier "ndfrt" ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:ndfrt.rxnorm, kgr:ndfrt.umls ; schema1:identifier "ndfrt" ; schema1:name "Veterans Health Administration National Drug File" ; skos:altLabel "NDF-RT", "National Drug File - Reference Terminology", "VA National Drug File", "VANDF" ; skos:inScheme "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:neo a schema1:Resource ; rdfs:label "Noctua Entity Ontology" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "This repository contains classes required by Noctua/Minerva for representing entities that are object of 'enabled by' relations, and similar molecular relationships. This includes: genes, protein (gene-level generic proteins and isoforms), functional RNAs, and complexes. These are represented as ontology classes, although NEO is not really an ontology in a conventional sense: there is no hierarchy, it is organized as a largely flat list." ; dcterms:identifier "neo" ; dcterms:modified "2025-08-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:neo.model ; schema1:name "Noctua Entity Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ngbo a schema1:Ontology ; rdfs:label "Next Generation Biobanking Ontology" ; dcterms:description "The Next Generation Biobanking Ontology (NGBO) is an open application ontology representing contextual data about omics digital assets in biobank. The ontology focuses on capturing the information about three main activities: wet bench analysis used to generate omics data, bioinformatics analysis used to analyze and interpret data, and data management." ; dcterms:identifier "ngbo" ; dcterms:license ; schema1:hasPart kgr:ngbo.owl ; schema1:name "Next Generation Biobanking Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:nif_cell a schema1:Ontology ; rdfs:label "NIF Cell" ; dcterms:description "Neuronal cell types" ; dcterms:identifier "nif_cell" ; dcterms:license "Not specified" ; schema1:name "NIF Cell" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:nif_dysfunction a schema1:Ontology ; rdfs:label "NIF Dysfunction" ; dcterms:description "Description unavailable." ; dcterms:identifier "nif_dysfunction" ; dcterms:license "Not specified" ; schema1:name "NIF Dysfunction" ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:nif_grossanatomy a schema1:Ontology ; rdfs:label "NIF Gross Anatomy" ; dcterms:description "Description unavailable." ; dcterms:identifier "nif_grossanatomy" ; dcterms:license "Not specified" ; schema1:name "NIF Gross Anatomy" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:nihreporter a schema1:DataSource ; rdfs:label "NIH Reporter" ; dcterms:created "2025-07-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "NIH Reporter (RePORTER) is a comprehensive data source providing access to information about NIH-funded research projects, including both intramural and extramural research activities. It serves as an electronic repository for NIH research project data, publications, and patents resulting from NIH funding since fiscal year 1985." ; dcterms:identifier "nihreporter" ; dcterms:modified "2025-09-24T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:indra.cogex.code, kgr:nihreporter.abstracts, kgr:nihreporter.api, kgr:nihreporter.clinicalstudies, kgr:nihreporter.linktables, kgr:nihreporter.patents, kgr:nihreporter.portal, kgr:nihreporter.projects, kgr:nihreporter.publications ; schema1:name "NIH Reporter" ; skos:inScheme "biomedical", "clinical", "health", "translational" ; adms:status "Active" ; foaf:homepage . kgr:nikg a schema1:KnowledgeGraph ; rdfs:label "Neighborhood Information KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Neighborhood Information KG (NIKG) is a knowledge graph warehouse for neighborhood information, providing structured data about community characteristics, demographics, and local resources." ; dcterms:identifier "nikg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:nikg.sparql ; schema1:name "Neighborhood Information KG" ; skos:inScheme "social determinants" ; adms:status "Active" ; foaf:homepage . kgr:nlm-ckn a schema1:KnowledgeGraph ; rdfs:label "NLM-CKN" ; dcterms:created "2025-04-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The NLM Cell Knowledge Network, a knowledge graph that contains knowledge about cellular phenotypes (cell types and cell states) that has been gathered through single cell technologies and related experiments. NLM-CKN is populated using validated computational analysis pipelines and natural language processing of scientific literature and integrated with other public sources of relevant knowledge about genes, anatomical structures, diseases, and drugs." ; dcterms:identifier "nlm-ckn" ; dcterms:license ; dcterms:modified "2025-06-12T20:33:29+00:00"^^xsd:dateTime ; schema1:hasPart kgr:nlm-ckn.schema ; schema1:name "NLM-CKN" ; doap:repository ; skos:inScheme "biological systems", "health", "phenotype" ; adms:status "Active" . kgr:nmr a schema1:Ontology ; rdfs:label "NMR-instrument specific component of metabolomics investigations" ; dcterms:description "Descriptors relevant to the experimental conditions of the Nuclear Magnetic Resonance (NMR) component in a metabolomics investigation." ; dcterms:identifier "nmr" ; dcterms:license "Not specified" ; schema1:hasPart kgr:nmr.owl ; schema1:name "NMR-instrument specific component of metabolomics investigations" ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:nomen a schema1:Ontology ; rdfs:label "NOMEN - A nomenclatural ontology for biological names" ; dcterms:description "NOMEN is a nomenclatural ontology for biological names (not concepts). It encodes the goverened rules of nomenclature." ; dcterms:identifier "nomen" ; dcterms:license ; schema1:hasPart kgr:nomen.owl ; schema1:name "NOMEN - A nomenclatural ontology for biological names" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:noncode a schema1:DataSource ; rdfs:label "NONCODE" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A comprehensive database dedicated to long non-coding RNA (lncRNA) annotation in animals and plants, providing systematic nomenclature, sequence information, genome location, expression profiles, functional predictions, and conservation analysis across 39 species (16 animals and 23 plants)" ; dcterms:identifier "noncode" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:noncode.blast, kgr:noncode.browse, kgr:noncode.conservation, kgr:noncode.disease, kgr:noncode.download, kgr:noncode.function, kgr:noncode.genome-browser, kgr:noncode.id-conversion, kgr:noncode.portal, kgr:noncode.search, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "NONCODE" ; skos:altLabel "NONCODE 2021", "NONCODE v6.0", "NONCODEV6" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:np-kg a schema1:KnowledgeGraph ; rdfs:label "NP-KG" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "NP-KG is a graph framework that creates a biomedical knowledge graph to identify and generate mechanistic hypotheses for pharmacokinetic natural product-drug interactions (NPDIs)." ; dcterms:identifier "np-kg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:np-kg.graph.networkx, kgr:np-kg.graph.tsv ; schema1:name "NP-KG" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "health", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:npo a schema1:Ontology ; rdfs:label "Neuron Phenotype Ontology" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Neuron Phenotype Ontology (NPO) is a FAIR ontology-based data model for representing complex cellular phenotypes of neurons. It characterizes neuron types as bundles of normalized phenotypic properties across multiple dimensions including species, anatomical location, morphology, molecular constituents, electrophysiology, connectivity, and circuit roles. The NPO provides a standardized and automatable approach for naming cell types and normalizing their constituent phenotypes using identifiers from community ontologies, enabling interoperability between different neuron naming schemes and classification systems." ; dcterms:identifier "npo" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Neuron Phenotype Ontology" ; skos:altLabel "NPO", "NPOKB" ; skos:inScheme "neuroscience" ; adms:status "Active" ; foaf:homepage . kgr:nsides a schema1:DataSource ; rdfs:label "nSIDES" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "nSIDES is a comprehensive collection of drug side effect and drug interaction resources developed by the Tatonetti Lab. It includes OnSIDES (adverse events from drug labels), KidSIDES (pediatric drug safety signals), AwareDX (sex-specific adverse drug effects), OffSIDES (off-label side effects), TwoSIDES (drug-drug interactions), and ManySIDES (combinations of 3+ drugs)." ; dcterms:identifier "nsides" ; dcterms:isReferencedBy , , ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:nsides.awaredx, kgr:nsides.kidsides, kgr:nsides.kidsides.code, kgr:nsides.onsides, kgr:nsides.onsides.code, kgr:nsides.pdsportal ; schema1:identifier "nsides" ; schema1:name "nSIDES" ; doap:repository ; skos:altLabel "nSIDES" ; skos:inScheme "drug discovery", "health", "pharmacology", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:oae a schema1:Ontology ; rdfs:label "Ontology of Adverse Events" ; dcterms:description "A biomedical ontology in the domain of adverse events" ; dcterms:identifier "oae" ; dcterms:license ; schema1:hasPart kgr:oae.owl ; schema1:name "Ontology of Adverse Events" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:oarcs a schema1:Ontology ; rdfs:label "Ontology of Arthropod Circulatory Systems" ; dcterms:description "OArCS is an ontology describing the Arthropod ciruclatory system." ; dcterms:identifier "oarcs" ; dcterms:license ; schema1:hasPart kgr:oarcs.owl ; schema1:name "Ontology of Arthropod Circulatory Systems" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:oba a schema1:Ontology ; rdfs:label "Ontology of Biological Attributes" ; dcterms:description "A collection of biological attributes (traits) covering all kingdoms of life." ; dcterms:identifier "oba" ; dcterms:license ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:oba.obo, kgr:oba.owl, kgr:oba.subsets.oba-basic.obo ; schema1:name "Ontology of Biological Attributes" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:obcs a schema1:Ontology ; rdfs:label "Ontology of Biological and Clinical Statistics" ; dcterms:description "A biomedical ontology in the domain of biological and clinical statistics." ; dcterms:identifier "obcs" ; dcterms:license ; schema1:hasPart kgr:obcs.owl ; schema1:name "Ontology of Biological and Clinical Statistics" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:obi a schema1:Ontology ; rdfs:label "Ontology for Biomedical Investigations" ; dcterms:description "An integrated ontology for the description of life-science and clinical investigations" ; dcterms:identifier "obi" ; dcterms:license ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:obi.obi-base.owl, kgr:obi.obi_core.owl, kgr:obi.obo, kgr:obi.owl, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Ontology for Biomedical Investigations" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:obib a schema1:Ontology ; rdfs:label "Ontology for Biobanking" ; dcterms:description "An ontology built for annotation and modeling of biobank repository and biobanking administration" ; dcterms:identifier "obib" ; dcterms:license ; schema1:hasPart kgr:obib.owl, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Ontology for Biobanking" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:obis a schema1:DataSource ; rdfs:label "Ocean Biodiversity Information System (OBIS)" ; dcterms:created "2025-12-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Ocean Biodiversity Information System (OBIS) is a global open-access data and information system providing free access to information about the distribution and abundance of living species in the ocean. It aggregates 161 million biodiversity records covering 160,000+ marine species from 600+ institutions across 56+ countries, using Darwin Core standards and World Register of Marine Species (WoRMS) as the authoritative taxonomic backbone." ; dcterms:identifier "obis" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-18T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , ; schema1:hasPart kgr:obis.api, kgr:obis.dca, kgr:obis.geoparquet, kgr:obis.manual, kgr:obis.mapper, kgr:obis.robis, kgr:obis.seamap ; schema1:identifier "obis" ; schema1:name "Ocean Biodiversity Information System (OBIS)" ; doap:repository ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:UNESCO-IOC, kgr:vliz . kgr:obo-db-ingest a schema1:Aggregator ; rdfs:label "OBO Database Ingestion" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A set of databases formalized in OBO, OWL, and OBO Graph JSON formats, as well as mappings and nodelists." ; dcterms:identifier "obo-db-ingest" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:obo-db-ingest.bigg.compartment.json, kgr:obo-db-ingest.bigg.compartment.obo, kgr:obo-db-ingest.bigg.compartment.owl, kgr:obo-db-ingest.bigg.compartment.sssom.tsv, kgr:obo-db-ingest.bigg.metabolite.json, kgr:obo-db-ingest.bigg.metabolite.obo, kgr:obo-db-ingest.bigg.metabolite.owl, kgr:obo-db-ingest.bigg.metabolite.sssom.tsv, kgr:obo-db-ingest.bigg.model.json, kgr:obo-db-ingest.bigg.model.obo, kgr:obo-db-ingest.bigg.model.owl, kgr:obo-db-ingest.bigg.reaction.json, kgr:obo-db-ingest.bigg.reaction.obo, kgr:obo-db-ingest.bigg.reaction.owl, kgr:obo-db-ingest.bigg.reaction.sssom.tsv, kgr:obo-db-ingest.ccle.json, kgr:obo-db-ingest.ccle.obo, kgr:obo-db-ingest.ccle.owl, kgr:obo-db-ingest.ccle.sssom.tsv, kgr:obo-db-ingest.cgnc.json, kgr:obo-db-ingest.cgnc.obo, kgr:obo-db-ingest.cgnc.owl, kgr:obo-db-ingest.cgnc.sssom.tsv, kgr:obo-db-ingest.chembl.compound.json, kgr:obo-db-ingest.chembl.compound.obo, kgr:obo-db-ingest.chembl.compound.owl, kgr:obo-db-ingest.chembl.compound.sssom.tsv, kgr:obo-db-ingest.chembl.target.json, kgr:obo-db-ingest.chembl.target.obo, kgr:obo-db-ingest.chembl.target.owl, kgr:obo-db-ingest.chembl.target.sssom.tsv, kgr:obo-db-ingest.civic.gid.json, kgr:obo-db-ingest.civic.gid.obo, kgr:obo-db-ingest.civic.gid.owl, kgr:obo-db-ingest.civic.gid.sssom.tsv, kgr:obo-db-ingest.clinicaltrials.json, kgr:obo-db-ingest.clinicaltrials.obo, kgr:obo-db-ingest.clinicaltrials.owl, kgr:obo-db-ingest.clinicaltrials.sssom.tsv, kgr:obo-db-ingest.complexportal.json, kgr:obo-db-ingest.complexportal.obo, kgr:obo-db-ingest.complexportal.owl, kgr:obo-db-ingest.complexportal.sssom.tsv, kgr:obo-db-ingest.cpt.json, kgr:obo-db-ingest.cpt.obo, kgr:obo-db-ingest.cpt.owl, kgr:obo-db-ingest.cpt.sssom.tsv, kgr:obo-db-ingest.credit.json, kgr:obo-db-ingest.credit.obo, kgr:obo-db-ingest.credit.owl, kgr:obo-db-ingest.cvx.json, kgr:obo-db-ingest.cvx.obo, kgr:obo-db-ingest.cvx.owl, kgr:obo-db-ingest.cvx.sssom.tsv, kgr:obo-db-ingest.depmap.json, kgr:obo-db-ingest.depmap.obo, kgr:obo-db-ingest.depmap.owl, kgr:obo-db-ingest.depmap.sssom.tsv, kgr:obo-db-ingest.dictybase.gene.json, kgr:obo-db-ingest.dictybase.gene.obo, kgr:obo-db-ingest.dictybase.gene.owl, kgr:obo-db-ingest.drugcentral.json, kgr:obo-db-ingest.drugcentral.obo, kgr:obo-db-ingest.drugcentral.owl, kgr:obo-db-ingest.drugcentral.sssom.tsv, kgr:obo-db-ingest.eccode.json, kgr:obo-db-ingest.eccode.obo, kgr:obo-db-ingest.eccode.owl, kgr:obo-db-ingest.eccode.sssom.tsv, kgr:obo-db-ingest.flybase.json, kgr:obo-db-ingest.flybase.obo, kgr:obo-db-ingest.flybase.owl, kgr:obo-db-ingest.gard.json, kgr:obo-db-ingest.gard.obo, kgr:obo-db-ingest.gard.owl, kgr:obo-db-ingest.geonames.feature.json, kgr:obo-db-ingest.geonames.feature.obo, kgr:obo-db-ingest.geonames.feature.owl, kgr:obo-db-ingest.geonames.json, kgr:obo-db-ingest.geonames.obo, kgr:obo-db-ingest.geonames.owl, kgr:obo-db-ingest.gtdb.json, kgr:obo-db-ingest.gtdb.obo, kgr:obo-db-ingest.gtdb.owl, kgr:obo-db-ingest.gtdb.sssom.tsv, kgr:obo-db-ingest.hgnc.genegroup.json, kgr:obo-db-ingest.hgnc.genegroup.obo, kgr:obo-db-ingest.hgnc.genegroup.owl, kgr:obo-db-ingest.hgnc.json, kgr:obo-db-ingest.hgnc.obo, kgr:obo-db-ingest.hgnc.owl, kgr:obo-db-ingest.hgnc.sssom.tsv, kgr:obo-db-ingest.icd10.json, kgr:obo-db-ingest.icd10.obo, kgr:obo-db-ingest.icd10.owl, kgr:obo-db-ingest.icd11.json, kgr:obo-db-ingest.icd11.obo, kgr:obo-db-ingest.icd11.owl, kgr:obo-db-ingest.icd11.sssom.tsv, kgr:obo-db-ingest.interpro.json, kgr:obo-db-ingest.interpro.obo, kgr:obo-db-ingest.interpro.owl, kgr:obo-db-ingest.itis.json, kgr:obo-db-ingest.itis.obo, kgr:obo-db-ingest.itis.owl, kgr:obo-db-ingest.kegg.genome.json, kgr:obo-db-ingest.kegg.genome.obo, kgr:obo-db-ingest.kegg.genome.owl, kgr:obo-db-ingest.mesh.json, kgr:obo-db-ingest.mesh.obo, kgr:obo-db-ingest.mesh.owl, kgr:obo-db-ingest.mgi.json, kgr:obo-db-ingest.mgi.obo, kgr:obo-db-ingest.mgi.owl, kgr:obo-db-ingest.mgi.sssom.tsv, kgr:obo-db-ingest.mirbase.family.json, kgr:obo-db-ingest.mirbase.family.obo, kgr:obo-db-ingest.mirbase.family.owl, kgr:obo-db-ingest.mirbase.json, kgr:obo-db-ingest.mirbase.mature.json, kgr:obo-db-ingest.mirbase.mature.obo, kgr:obo-db-ingest.mirbase.mature.owl, kgr:obo-db-ingest.mirbase.mature.sssom.tsv, kgr:obo-db-ingest.mirbase.obo, kgr:obo-db-ingest.mirbase.owl, kgr:obo-db-ingest.mirbase.sssom.tsv, kgr:obo-db-ingest.msigdb.json, kgr:obo-db-ingest.msigdb.obo, kgr:obo-db-ingest.msigdb.owl, kgr:obo-db-ingest.msigdb.sssom.tsv, kgr:obo-db-ingest.ncbi.gc.json, kgr:obo-db-ingest.ncbi.gc.obo, kgr:obo-db-ingest.ncbi.gc.owl, kgr:obo-db-ingest.ncbi.gc.sssom.tsv, kgr:obo-db-ingest.nihreporter.project.json, kgr:obo-db-ingest.nihreporter.project.obo, kgr:obo-db-ingest.nihreporter.project.owl, kgr:obo-db-ingest.nlm.json, kgr:obo-db-ingest.nlm.obo, kgr:obo-db-ingest.nlm.owl, kgr:obo-db-ingest.nlm.publisher.json, kgr:obo-db-ingest.nlm.publisher.obo, kgr:obo-db-ingest.nlm.publisher.owl, kgr:obo-db-ingest.nlm.sssom.tsv, kgr:obo-db-ingest.npass.json, kgr:obo-db-ingest.npass.obo, kgr:obo-db-ingest.npass.owl, kgr:obo-db-ingest.npass.sssom.tsv, kgr:obo-db-ingest.omim.ps.json, kgr:obo-db-ingest.omim.ps.obo, kgr:obo-db-ingest.omim.ps.owl, kgr:obo-db-ingest.pathbank.json, kgr:obo-db-ingest.pathbank.obo, kgr:obo-db-ingest.pathbank.owl, kgr:obo-db-ingest.pathbank.sssom.tsv, kgr:obo-db-ingest.pfam.clan.json, kgr:obo-db-ingest.pfam.clan.obo, kgr:obo-db-ingest.pfam.clan.owl, kgr:obo-db-ingest.pfam.json, kgr:obo-db-ingest.pfam.obo, kgr:obo-db-ingest.pfam.owl, kgr:obo-db-ingest.pharmgkb.disease.json, kgr:obo-db-ingest.pharmgkb.disease.obo, kgr:obo-db-ingest.pharmgkb.disease.owl, kgr:obo-db-ingest.pharmgkb.disease.sssom.tsv, kgr:obo-db-ingest.pharmgkb.drug.json, kgr:obo-db-ingest.pharmgkb.drug.obo, kgr:obo-db-ingest.pharmgkb.drug.owl, kgr:obo-db-ingest.pharmgkb.drug.sssom.tsv, kgr:obo-db-ingest.pharmgkb.gene.json, kgr:obo-db-ingest.pharmgkb.gene.obo, kgr:obo-db-ingest.pharmgkb.gene.owl, kgr:obo-db-ingest.pharmgkb.gene.sssom.tsv, kgr:obo-db-ingest.pharmgkb.pathways.json, kgr:obo-db-ingest.pharmgkb.pathways.obo, kgr:obo-db-ingest.pharmgkb.pathways.owl, kgr:obo-db-ingest.pharmgkb.variant.json, kgr:obo-db-ingest.pharmgkb.variant.obo, kgr:obo-db-ingest.pharmgkb.variant.owl, kgr:obo-db-ingest.pharmgkb.variant.sssom.tsv, kgr:obo-db-ingest.pid.pathway.json, kgr:obo-db-ingest.pid.pathway.obo, kgr:obo-db-ingest.pid.pathway.owl, kgr:obo-db-ingest.pombase.json, kgr:obo-db-ingest.pombase.obo, kgr:obo-db-ingest.pombase.owl, kgr:obo-db-ingest.reactome.json, kgr:obo-db-ingest.reactome.obo, kgr:obo-db-ingest.reactome.owl, kgr:obo-db-ingest.rgd.json, kgr:obo-db-ingest.rgd.obo, kgr:obo-db-ingest.rgd.owl, kgr:obo-db-ingest.rgd.sssom.tsv, kgr:obo-db-ingest.rhea.json, kgr:obo-db-ingest.rhea.obo, kgr:obo-db-ingest.rhea.owl, kgr:obo-db-ingest.rhea.sssom.tsv, kgr:obo-db-ingest.ror.json, kgr:obo-db-ingest.ror.obo, kgr:obo-db-ingest.ror.owl, kgr:obo-db-ingest.ror.sssom.tsv, kgr:obo-db-ingest.sgd.json, kgr:obo-db-ingest.sgd.obo, kgr:obo-db-ingest.sgd.owl, kgr:obo-db-ingest.signor.json, kgr:obo-db-ingest.signor.obo, kgr:obo-db-ingest.signor.owl, kgr:obo-db-ingest.slm.json, kgr:obo-db-ingest.slm.obo, kgr:obo-db-ingest.slm.owl, kgr:obo-db-ingest.slm.sssom.tsv, kgr:obo-db-ingest.sty.json, kgr:obo-db-ingest.sty.obo, kgr:obo-db-ingest.sty.owl, kgr:obo-db-ingest.uniprot.json, kgr:obo-db-ingest.uniprot.obo, kgr:obo-db-ingest.uniprot.owl, kgr:obo-db-ingest.uniprot.ptm.json, kgr:obo-db-ingest.uniprot.ptm.obo, kgr:obo-db-ingest.uniprot.ptm.owl, kgr:obo-db-ingest.uniprot.ptm.sssom.tsv, kgr:obo-db-ingest.uniprot.sssom.tsv, kgr:obo-db-ingest.wikipathways.json, kgr:obo-db-ingest.wikipathways.obo, kgr:obo-db-ingest.wikipathways.owl, kgr:obo-db-ingest.zfin.json, kgr:obo-db-ingest.zfin.obo, kgr:obo-db-ingest.zfin.owl, kgr:obo-db-ingest.zfin.sssom.tsv ; schema1:name "OBO Database Ingestion" ; doap:repository ; skos:inScheme "upper" ; adms:status "Active" ; foaf:homepage . kgr:obo_rel a schema1:Ontology ; rdfs:label "OBO relationship types (legacy)" ; dcterms:description "Description unavailable." ; dcterms:identifier "obo_rel" ; dcterms:license "Not specified" ; schema1:name "OBO relationship types (legacy)" ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:occo a schema1:Ontology ; rdfs:label "Occupation Ontology" ; dcterms:description "An ontology representing occupations. It is designed to facilitate harmonization of existing occupation standards, such as the US Bureau of Labor Statistics Standard Occupational Classification (US SOC), the International Standard Classification of Occupations (ISCO), the UK National Statistics Standard Occupational Classification (UK SOC), and the European Skills, Competences, Qualifications and Occupations (ESCO) of the European Union." ; dcterms:identifier "occo" ; dcterms:license ; schema1:hasPart kgr:occo.owl ; schema1:name "Occupation Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:offsides a schema1:DataSource ; rdfs:label "OFFSIDES" ; dcterms:created "2025-07-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OFFSIDES is a database of drug side effects that were found through data mining of FDA Adverse Event Reporting System (FAERS) but are not listed on the official FDA drug labels. Part of the nSIDES resource developed by Tatonetti Lab." ; dcterms:identifier "offsides" ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bioteque.embeddings ; schema1:name "OFFSIDES" ; skos:altLabel "OffSIDES" ; skos:inScheme "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:ogg a schema1:Ontology ; rdfs:label "The Ontology of Genes and Genomes" ; dcterms:description "A formal ontology of genes and genomes of biological organisms." ; dcterms:identifier "ogg" ; dcterms:license ; schema1:hasPart kgr:ogg.owl ; schema1:name "The Ontology of Genes and Genomes" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ogi a schema1:Ontology ; rdfs:label "Ontology for genetic interval" ; dcterms:description "An ontology that formalizes the genomic element by defining an upper class genetic interval" ; dcterms:identifier "ogi" ; dcterms:license "Not specified" ; schema1:hasPart kgr:ogi.owl ; schema1:name "Ontology for genetic interval" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:ogms a schema1:Ontology ; rdfs:label "Ontology for General Medical Science" ; dcterms:description "An ontology for representing treatment of disease and diagnosis and on carcinomas and other pathological entities" ; dcterms:identifier "ogms" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:ogms.owl ; schema1:name "Ontology for General Medical Science" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:ogsf a schema1:Ontology ; rdfs:label "Ontology of Genetic Susceptibility Factor" ; dcterms:description "An application ontology to represent genetic susceptibility to a specific disease, adverse event, or a pathological process." ; dcterms:identifier "ogsf" ; dcterms:license ; schema1:hasPart kgr:ogsf.owl ; schema1:name "Ontology of Genetic Susceptibility Factor" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:ohd a schema1:Ontology ; rdfs:label "Oral Health and Disease Ontology" ; dcterms:description "The Oral Health and Disease Ontology is used for representing the diagnosis and treatment of dental maladies." ; dcterms:identifier "ohd" ; dcterms:license ; schema1:hasPart kgr:ohd.dev.ohd.owl, kgr:ohd.owl ; schema1:name "Oral Health and Disease Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:ohmi a schema1:Ontology ; rdfs:label "Ontology of Host-Microbiome Interactions" ; dcterms:description "The Ontology of Host-Microbiome Interactions aims to ontologically represent and standardize various entities and relations related to microbiomes, microbiome host organisms (e.g., human and mouse), and the interactions between the hosts and microbiomes at different conditions." ; dcterms:identifier "ohmi" ; dcterms:license ; schema1:hasPart kgr:ohmi.owl ; schema1:name "Ontology of Host-Microbiome Interactions" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ohpi a schema1:Ontology ; rdfs:label "Ontology of Host Pathogen Interactions" ; dcterms:description "OHPI is a community-driven ontology of host-pathogen interactions (OHPI) and represents the virulence factors (VFs) and how the mutants of VFs in the Victors database become less virulence inside a host organism or host cells. It is developed to represent manually curated HPI knowledge available in the PHIDIAS resource." ; dcterms:identifier "ohpi" ; dcterms:license ; schema1:hasPart kgr:ohpi.owl ; schema1:name "Ontology of Host Pathogen Interactions" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:oio a schema1:Ontology ; rdfs:label "OBO Interoperability Ontology" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The OBO Interoperability Ontology (OIO) was a set of annotation properties and ontology metadata standards developed to promote interoperability between OBO Foundry ontologies. Its terms and properties have been superseded by OMO (Ontology Metadata Ontology) and are now considered deprecated. OIO provided foundational metadata terms that were widely used in early OBO ontologies for describing ontology versioning, imports, and other metadata." ; dcterms:identifier "oio" ; dcterms:license ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:oio.obo, kgr:oio.owl ; schema1:identifier "oio" ; schema1:name "OBO Interoperability Ontology" ; skos:altLabel "OIO", "oio" ; skos:inScheme "biological systems", "upper" ; adms:status "Inactive" . kgr:olatdv a schema1:Ontology ; rdfs:label "Medaka Developmental Stages" ; dcterms:description "Life cycle stages for Medaka" ; dcterms:identifier "olatdv" ; dcterms:license ; schema1:hasPart kgr:olatdv.obo, kgr:olatdv.owl ; schema1:name "Medaka Developmental Stages" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:ols a schema1:Aggregator ; rdfs:label "Ontology Lookup Service" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Ontology Lookup Service (OLS) is a repository for biomedical ontologies that aims to provide a single point of access to the latest ontology versions. Users can browse ontologies through the website and programmatically via the OLS API. Maintained by the Samples, Phenotypes and Ontologies Team (SPOT) at EMBL-EBI." ; dcterms:identifier "ols" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ols.api, kgr:ols.json, kgr:ols.mappings, kgr:ols.neo4j, kgr:ols.portal, kgr:ols.solr ; schema1:identifier "ols" ; schema1:name "Ontology Lookup Service" ; doap:repository ; skos:altLabel "OLS", "OLS4" ; skos:inScheme "biological systems", "biomedical", "information technology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:oma a schema1:DataSource ; rdfs:label "OMA" ; dcterms:created "2025-05-07T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OMA (Orthologous MAtrix) is a database of orthologous genes among multiple species, providing a systematic classification of orthologs across complete genomes." ; dcterms:identifier "oma" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:oma.api.rest, kgr:oma.api.sparql, kgr:oma.cdna.eukaryotes.fasta, kgr:oma.cdna.prokaryotes.fasta, kgr:oma.groups.orthoxml, kgr:oma.groups.txt, kgr:oma.hdf5, kgr:oma.hogs.orthoxml, kgr:oma.mapping.uniprot, kgr:oma.pairs.txt, kgr:oma.proteins.fasta, kgr:oma.rdf, kgr:oma.site ; schema1:name "OMA" ; skos:inScheme "biological systems", "organisms" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:sib . kgr:omiabis a schema1:Ontology ; rdfs:label "Ontologized MIABIS" ; dcterms:description "An ontological version of MIABIS (Minimum Information About BIobank data Sharing)" ; dcterms:identifier "omiabis" ; dcterms:license ; schema1:hasPart kgr:omiabis.owl ; schema1:name "Ontologized MIABIS" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:omicsdi a schema1:DataSource ; rdfs:label "OmicsDI" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OmicsDI (Omics Discovery Index) is an integrated resource for omics datasets across multiple repositories, providing a unified search interface for genomics, proteomics, metabolomics, and transcriptomics data." ; dcterms:identifier "omicsdi" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:omicsdi.api, kgr:omicsdi.portal ; schema1:identifier "omicsdi" ; schema1:name "OmicsDI" ; skos:altLabel "Omics Discovery Index", "OmicsDI" ; skos:inScheme "genomics", "proteomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:omim a schema1:DataSource ; rdfs:label "OMIM" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OMIM (Online Mendelian Inheritance in Man) is a continuously updated, expert-curated catalog of human genes and genetic disorders, focusing on genotype–phenotype relationships and the molecular basis of disease." ; dcterms:identifier "omim" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:genecards.disease.associations, kgr:genecards.gene.annotations, kgr:ncbigene.mim2gene_medgen, kgr:omim.api, kgr:omim.mim2gene, kgr:omim.web, kgr:pharmkg.graph, kgr:spoke.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "omim" ; schema1:name "OMIM" ; skos:inScheme "biomedical", "clinical", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:omit a schema1:Ontology ; rdfs:label "Ontology for MIRNA Target" ; dcterms:description "Ontology to establish data exchange standards and common data elements in the microRNA (miR) domain" ; dcterms:identifier "omit" ; dcterms:license ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:omit.owl ; schema1:name "Ontology for MIRNA Target" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:omnicorp a schema1:DataSource ; rdfs:label "OmniCorp" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OmniCorp provides co-occurrence data derived from PubMed abstracts, enabling researchers to identify and quantify relationships between biomedical concepts based on their frequency of co-mention in the literature. This resource is part of the NCATS Translator infrastructure and supports literature-based discovery and evidence aggregation for knowledge graph construction." ; dcterms:identifier "omnicorp" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:omnicorp.api, kgr:omnicorp.cooccurrence ; schema1:identifier "omnicorp" ; schema1:name "OmniCorp" ; skos:altLabel "OmniCorp" ; skos:inScheme "biomedical", "literature", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:omnipath a schema1:Aggregator ; rdfs:label "OmniPath" ; dcterms:created "2025-07-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OmniPath is a comprehensive prior knowledge resource that integrates molecular interactions and biological pathway information from over 100 original databases and resources. It provides unified access to protein-protein interactions, gene regulatory interactions, enzyme-PTM relationships, protein complexes, protein annotations, and intercellular communication data through multiple interfaces including web services, R/Bioconductor packages, Python clients, and Cytoscape plugins." ; dcterms:identifier "omnipath" ; dcterms:isReferencedBy , ; dcterms:modified "2025-09-27T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:bioteque.embeddings, kgr:omnipath.cytoscape_plugin, kgr:omnipath.explorer, kgr:omnipath.pypath, kgr:omnipath.python_client, kgr:omnipath.r_package, kgr:omnipath.webservice ; schema1:name "OmniPath" ; doap:repository ; skos:inScheme "biological systems", "pathways", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:omo a schema1:Ontology ; rdfs:label "OBO Metadata Ontology" ; dcterms:description "An ontology specifies terms that are used to annotate ontology terms for all OBO ontologies. The ontology was developed as part of Information Artifact Ontology (IAO)." ; dcterms:identifier "omo" ; dcterms:license ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:omo.owl ; schema1:name "OBO Metadata Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:omp a schema1:Ontology ; rdfs:label "Ontology of Microbial Phenotypes" ; dcterms:description "An ontology of phenotypes covering microbes" ; dcterms:identifier "omp" ; dcterms:license ; schema1:hasPart kgr:omp.obo, kgr:omp.owl ; schema1:name "Ontology of Microbial Phenotypes" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:omrse a schema1:Ontology ; rdfs:label "Ontology for Modeling and Representation of Social Entities" ; dcterms:description "The Ontology for Modeling and Representation of Social Entities (OMRSE) is an OBO Foundry ontology that represents the various entities that arise from human social interactions, such as social acts, social roles, social groups, and organizations." ; dcterms:identifier "omrse" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:omrse.owl ; schema1:name "Ontology for Modeling and Representation of Social Entities" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:oncokb a schema1:DataSource ; rdfs:label "OncoKB" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OncoKB is a precision oncology knowledge base developed at Memorial Sloan Kettering Cancer Center that contains biological and clinical information about genomic alterations in cancer. It provides alteration- and tumor type-specific therapeutic implications classified using the OncoKB Levels of Evidence system, which assigns clinical actionability to individual mutational events. The platform integrates data from 945 genes, 7967 alterations, 143 cancer types, and 156 drugs with FDA-recognized human genetic variant database status." ; dcterms:identifier "oncokb" ; dcterms:isReferencedBy , ; dcterms:modified "2025-09-24T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:oncokb.annotator, kgr:oncokb.api, kgr:oncokb.demo, kgr:oncokb.web_interface ; schema1:name "OncoKB" ; doap:repository ; skos:inScheme "biomedical", "clinical", "genomics", "health", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:one a schema1:Ontology ; rdfs:label "Ontology for Nutritional Epidemiology" ; dcterms:description "An ontology to standardize research output of nutritional epidemiologic studies." ; dcterms:identifier "one" ; dcterms:license ; schema1:hasPart kgr:one.owl ; schema1:name "Ontology for Nutritional Epidemiology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:ons a schema1:Ontology ; rdfs:label "Ontology for Nutritional Studies" ; dcterms:description "An ontology for description of concepts in the nutritional studies domain." ; dcterms:identifier "ons" ; dcterms:license ; schema1:hasPart kgr:ons.owl ; schema1:name "Ontology for Nutritional Studies" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:ontoavida a schema1:Ontology ; rdfs:label "OntoAvida: ontology for Avida digital evolution platform" ; dcterms:description "OntoAvida develops an integrated vocabulary for the description of the most widely-used computational approach for studying evolution using digital organisms (i.e., self-replicating computer programs that evolve within a user-defined computational environment)." ; dcterms:identifier "ontoavida" ; dcterms:license ; schema1:hasPart kgr:ontoavida.obo, kgr:ontoavida.owl ; schema1:name "OntoAvida: ontology for Avida digital evolution platform" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ontology-kp a schema1:KnowledgeGraph ; rdfs:label "Ontology KP" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Translator Knowledge Provider dedicated to ontology-based services." ; dcterms:identifier "ontology-kp" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ontology-kp.docs, kgr:ontology-kp.ubergraph ; schema1:name "Ontology KP" ; skos:inScheme "other" ; adms:status "Active" . kgr:ontoneo a schema1:Ontology ; rdfs:label "Obstetric and Neonatal Ontology" ; dcterms:description "The Obstetric and Neonatal Ontology is a structured controlled vocabulary to provide a representation of the data from electronic health records (EHRs) involved in the care of the pregnant woman, and of her baby." ; dcterms:identifier "ontoneo" ; dcterms:license ; schema1:hasPart kgr:ontoneo.owl ; schema1:name "Obstetric and Neonatal Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:oostt a schema1:Ontology ; rdfs:label "Ontology of Organizational Structures of Trauma centers and Trauma systems" ; dcterms:description "An ontology built for representating the organizational components of trauma centers and trauma systems." ; dcterms:identifier "oostt" ; dcterms:license ; schema1:hasPart kgr:oostt.owl ; schema1:name "Ontology of Organizational Structures of Trauma centers and Trauma systems" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:open-tree-of-life a schema1:DataSource ; rdfs:label "Open Tree of Life" ; dcterms:created "2025-12-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Open Tree of Life (OToL) is a comprehensive, collaborative online phylogenetic tree synthesizing published evolutionary estimates with taxonomic data. It combines phylogenetic data from 1,216 published papers with 10 source taxonomies to construct a dynamic tree of life with 2.4 million tips representing species and infraspecific taxa." ; dcterms:identifier "open-tree-of-life" ; dcterms:isReferencedBy , , , ; dcterms:license ; dcterms:modified "2025-12-18T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:otol.api, kgr:otol.bulk-download, kgr:otol.documentation, kgr:otol.phylesystem, kgr:otol.tnrs, kgr:otol.tree-browser ; schema1:identifier "open-tree-of-life" ; schema1:name "Open Tree of Life" ; doap:repository ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:open-tree-of-life-collaboration . kgr:openbiodiv a schema1:KnowledgeGraph ; rdfs:label "OpenBiodiv" ; dcterms:created "2025-12-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OpenBiodiv is an open-access biodiversity knowledge graph that extracts, integrates, and provides semantic access to linked open biodiversity data from scientific literature and established taxonomic backbones. It converts narrative biodiversity information into computable semantic form and maintains a comprehensive knowledge management system for biodiversity science." ; dcterms:identifier "openbiodiv" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:openbiodiv.api, kgr:openbiodiv.ontology.guide, kgr:openbiodiv.ontology.ttl, kgr:openbiodiv.portal, kgr:openbiodiv.sparql ; schema1:identifier "openbiodiv" ; schema1:name "OpenBiodiv" ; doap:repository ; skos:inScheme "literature" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:pensoft . kgr:openpredict a schema1:Aggregator ; rdfs:label "OpenPredict" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OpenPredict is an NCATS Translator Knowledge Provider that provides machine learning-based predictions for drug-target interactions and drug-disease associations to support drug repurposing. OpenPredict integrates multiple biomedical knowledge graphs and applies various machine learning algorithms to predict potential therapeutic uses for existing drugs. The service offers predictions with confidence scores and provides evidence trails linking drugs to diseases through intermediate biological entities like targets and pathways." ; dcterms:identifier "openpredict" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:openpredict.api, kgr:openpredict.predictions, kgr:openpredict.ui ; schema1:identifier "openpredict" ; schema1:name "OpenPredict" ; doap:repository ; skos:altLabel "OpenPredict", "OpenPredict API" ; skos:inScheme "biomedical", "drug discovery", "pharmacology", "precision medicine", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:opentargets a schema1:KnowledgeGraph ; rdfs:label "Open Targets" ; dcterms:created "2025-05-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Open Targets is a collaborative effort to systematically identify and prioritise the best targets to safely and effectively treat rare and common diseases." ; dcterms:identifier "opentargets" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:epigraphdb.graph, kgr:opentargets.api.graphql, kgr:opentargets.api.rest, kgr:opentargets.platform, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Open Targets" ; doap:repository ; skos:inScheme "biomedical", "health" ; adms:status "Active" ; foaf:homepage . kgr:opl a schema1:Ontology ; rdfs:label "Ontology for Parasite LifeCycle" ; dcterms:description "A reference ontology for parasite life cycle stages." ; dcterms:identifier "opl" ; dcterms:license ; schema1:hasPart kgr:opl.owl ; schema1:name "Ontology for Parasite LifeCycle" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:opmi a schema1:Ontology ; rdfs:label "Ontology of Precision Medicine and Investigation" ; dcterms:description "The Ontology of Precision Medicine and Investigation (OPMI) aims to ontologically represent and standardize various entities and relations associated with precision medicine and related investigations at different conditions." ; dcterms:identifier "opmi" ; dcterms:license ; schema1:hasPart kgr:opmi.owl ; schema1:name "Ontology of Precision Medicine and Investigation" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:orcid a schema1:DataSource ; rdfs:label "ORCID" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ORCID is a free, unique, persistent identifier (PID) for individuals to use as they engage in research, scholarship, and innovation activities." ; dcterms:identifier "orcid" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:orcid.api, kgr:orcid.portal ; schema1:name "ORCID" ; doap:repository ; skos:inScheme "other" ; adms:status "Active" ; foaf:homepage . kgr:ordo a schema1:DataSource ; rdfs:label "Orphanet Rare Disease Ontology (ORDO)" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Orphanet Rare Disease Ontology (ORDO) is an open-access ontology developed from the Orphanet information system, enabling complex queries of rare diseases and their epidemiological data (age of onset, prevalence, mode of inheritance) and gene-disorder functional relationships." ; dcterms:identifier "ordo" ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:ordo.owl, kgr:ordo.sparql, kgr:orphacode.api, kgr:orphacode.nomenclature, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "ordo" ; schema1:name "Orphanet Rare Disease Ontology (ORDO)" ; skos:inScheme "biomedical", "clinical", "genomics", "health", "phenotype" ; adms:status "Active" ; foaf:homepage . kgr:ornaseq a schema1:Ontology ; rdfs:label "Ontology of RNA Sequencing" ; dcterms:description "An application ontology designed to annotate next-generation sequencing experiments performed on RNA." ; dcterms:identifier "ornaseq" ; dcterms:license ; schema1:hasPart kgr:ornaseq.owl ; schema1:name "Ontology of RNA Sequencing" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:orphanet a schema1:DataSource ; rdfs:label "Orphanet" ; dcterms:created "2025-07-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Orphanet is a unique resource for information and data on rare diseases and orphan drugs, aimed at improving diagnosis, care, and treatment of patients with rare diseases. It maintains the Orphanet rare disease nomenclature (ORPHAcodes), which is essential for improving the visibility of rare diseases in health and research information systems." ; dcterms:hasVersion "July 2025" ; dcterms:identifier "orphanet" ; dcterms:modified "2025-07-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:disgenet.data, kgr:genecards.disease.associations, kgr:orphanet.biobanks, kgr:orphanet.biobanksnetworks, kgr:orphanet.clinicaltrials, kgr:orphanet.clinicaltrialsnetworks, kgr:orphanet.diagnostictests, kgr:orphanet.expertcenters, kgr:orphanet.expertcentersnetworks, kgr:orphanet.orphadataapi, kgr:orphanet.orphandrugs, kgr:orphanet.patientorganizations, kgr:orphanet.patientorganizationsnetworks, kgr:orphanet.patientregistries, kgr:orphanet.patientregistriesnetworks, kgr:orphanet.researchprojects, kgr:orphanet.researchprojectsnetworks ; schema1:identifier "orphanet" ; schema1:name "Orphanet" ; doap:repository ; skos:inScheme "biomedical", "clinical" ; adms:status "Active" ; foaf:homepage . kgr:orthodb a schema1:DataSource ; rdfs:label "OrthoDB" ; dcterms:created "2025-05-07T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OrthoDB is a comprehensive database of orthologous protein-coding genes across multiple species, providing evolutionary and functional annotations of orthologous groups." ; dcterms:identifier "orthodb" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-12-07T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:orthodb.aa_fasta, kgr:orthodb.api.rest, kgr:orthodb.api.sparql, kgr:orthodb.cds_fasta, kgr:orthodb.gene_xrefs, kgr:orthodb.genes, kgr:orthodb.og2genes, kgr:orthodb.og_xrefs, kgr:orthodb.ogs, kgr:orthodb.site, kgr:orthodb.species ; schema1:name "OrthoDB" ; doap:repository ; skos:inScheme "biological systems", "organisms" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:sib . kgr:ovae a schema1:Ontology ; rdfs:label "Ontology of Vaccine Adverse Events" ; dcterms:description "A biomedical ontology in the domain of vaccine adverse events." ; dcterms:identifier "ovae" ; dcterms:license ; schema1:hasPart kgr:ovae.owl ; schema1:name "Ontology of Vaccine Adverse Events" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:owlsim a schema1:DataSource ; rdfs:label "OWLSim Ontology Based Profile Matching" ; dcterms:created "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OWLSim is a Java library and set of command-line tools for calculating semantic similarity between ontology classes and individuals. Part of the OWLTools suite, OWLSim implements various semantic similarity algorithms including Information Content-based methods for comparing phenotypes, diseases, and other ontology-based profiles. It is extensively used by the Monarch Initiative for phenotype matching, disease gene prioritization, and model organism comparison. OWLSim enables researchers to find similar disease profiles, identify candidate genes based on phenotypic similarity, and connect human diseases with model organism phenotypes using semantic similarity metrics across biological ontologies." ; dcterms:identifier "owlsim" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-11-19T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:owlsim.cli, kgr:owlsim.library ; schema1:identifier "owlsim" ; schema1:name "OWLSim Ontology Based Profile Matching" ; doap:repository ; skos:altLabel "OWLSim" ; skos:inScheme "biomedical", "genomics", "information technology", "phenotype", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:oxo a schema1:Aggregator ; rdfs:label "Ontology Xref Service" ; dcterms:created "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "OxO (Ontology Xref Service) is a cross-ontology mapping service developed by EMBL-EBI's Samples, Phenotypes and Ontologies Team (SPOT). The service provides mappings between terms from different ontologies, enabling users to search for equivalent or related terms across multiple ontological resources. OxO aggregates cross-references from ontologies loaded in the Ontology Lookup Service (OLS) and enriches these with manual mappings and inference-based relationships." ; dcterms:identifier "oxo" ; dcterms:modified "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:oxo.api, kgr:oxo.portal ; schema1:identifier "oxo" ; schema1:name "Ontology Xref Service" ; doap:repository ; skos:altLabel "OxO" ; skos:inScheme "biological systems", "biomedical", "upper" ; adms:status "Inactive" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:pankbase a schema1:DataSource ; rdfs:label "PanKBase" ; dcterms:created "2025-03-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PanKbase is a comprehensive, centralized resource for the study of the human pancreas and diabetes. The PanKbase collective aims to integrate diverse type 1 diabetes (T1D) datasets with expert-curated knowledge in a centralized, open-source data hub. Part of the NIH/NIDDK Human Islet Research Network (HIRN)." ; dcterms:identifier "pankbase" ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:pankbase.api, kgr:pankbase.graph, kgr:pankbase.graph.api, kgr:pankbase.graph.site ; schema1:name "PanKBase" ; doap:repository ; skos:inScheme "biological systems", "clinical", "genomics", "health", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:panther a schema1:Resource ; rdfs:label "PANTHER" ; dcterms:created "2025-03-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PANTHER is a Protein ANalysis THrough Evolutionary Relationships Classification System. The mission of the PANTHER knowledgebase is to support biomedical and other research by providing comprehensive information about the evolution of protein-coding gene families, particularly protein phylogeny, function and genetic variation impacting that function." ; dcterms:identifier "panther" ; dcterms:modified "2026-01-23T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:automat.panther, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:microbiomekg.api, kgr:translator.panther.graph ; schema1:identifier "panther" ; schema1:name "PANTHER" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:pao a schema1:Ontology ; rdfs:label "Plant Anatomy Ontology" ; dcterms:description "Description unavailable." ; dcterms:identifier "pao" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Plant Anatomy Ontology" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:pathophenodb a schema1:DataSource ; rdfs:label "PathoPhenoDB" ; dcterms:created "2025-05-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PathoPhenoDB is a database of human pathogens, the diseases and phenotypes they elicit in human organisms, and information related to drug treatments and mechanisms of drug resistance. Specifically, PathoPhenoDB contains associations between pathogens and diseases, between pathogens and phenotypes, between drugs that are approved to treat particular pathogens, and it identifies genes or proteins within pathogens that can convey resistance to particular drugs." ; dcterms:identifier "pathophenodb" ; dcterms:isReferencedBy ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:pathophenodb.data, kgr:pathophenodb.web, kgr:spoke.graph ; schema1:name "PathoPhenoDB" ; doap:repository ; skos:inScheme "drug discovery", "health", "microbiology", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:pathway-commons a schema1:Aggregator ; rdfs:label "Pathway Commons" ; dcterms:created "2025-12-20T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Pathway Commons is a centralized web resource that aggregates biological pathway and molecular interaction data from 22 major public databases into standardized BioPAX format. It provides 4,794 pathways and over 2.3 million molecular interactions accessible through multiple interfaces including web portal, REST API, and downloadable datasets, supporting systems biology research, pathway analysis, and network visualization." ; dcterms:identifier "pathway-commons" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2025-12-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:pathway-commons.api, kgr:pathway-commons.biopax, kgr:pathway-commons.documentation, kgr:pathway-commons.downloads, kgr:pathway-commons.gmt, kgr:pathway-commons.jsonld, kgr:pathway-commons.sif, kgr:pathway-commons.web ; schema1:identifier "pathway-commons" ; schema1:name "Pathway Commons" ; doap:repository ; skos:altLabel "PC", "Pathway Commons", "PathwayCommons" ; skos:inScheme "pathways", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:mskcc, kgr:utoronto . kgr:pathwhiz a schema1:Resource ; rdfs:label "PathWhiz" ; dcterms:created "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PathWhiz is a web-based pathway drawing and visualization tool designed for creating colorful, visually pleasing, and biologically accurate pathway diagrams that are machine-readable and interactive. PathWhiz supports a high level of biological detail including metabolites (with automated structure generation), protein complexes (with quaternary structures, covalent modifications, and cofactors), nucleic acids, membranes, subcellular structures, cells, tissues, and organs. PathWhiz has been used to generate over 700 pathway diagrams for popular databases including HMDB, DrugBank, and PathBank, and supports export to BioPAX, SBGN-ML, SBML, and PWML formats as well as high-resolution images." ; dcterms:identifier "pathwhiz" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:pathwhiz.editor, kgr:pathwhiz.pathways ; schema1:identifier "pathwhiz" ; schema1:name "PathWhiz" ; doap:repository ; skos:altLabel "PathWhiz", "PathWhiz Pathway Editor" ; skos:inScheme "biological systems", "biomedical", "drug discovery", "pathways" ; adms:status "Active" ; foaf:homepage . kgr:pato a schema1:Ontology ; rdfs:label "Phenotype And Trait Ontology" ; dcterms:description "An ontology of phenotypic qualities (properties, attributes or characteristics)" ; dcterms:identifier "pato" ; dcterms:license ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:pato.json, kgr:pato.obo, kgr:pato.owl, kgr:pato.pato-base.owl, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Phenotype And Trait Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:patric a schema1:DataSource ; rdfs:label "Pathosystems Resource Integration Center" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Pathosystems Resource Integration Center (PATRIC) was a bacterial bioinformatics resource center providing integrated data and analysis tools for bacterial infectious disease research. PATRIC has been succeeded by the Bacterial and Viral Bioinformatics Resource Center (BV-BRC), which continues to provide comprehensive bacterial genomics data, comparative analysis tools, and molecular characterization resources. The legacy PATRIC data and functionality have been integrated into BV-BRC." ; dcterms:identifier "patric" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:patric.api, kgr:patric.genomes, kgr:patric.web ; schema1:identifier "patric" ; schema1:name "Pathosystems Resource Integration Center" ; skos:altLabel "BV-BRC", "Bacterial and Viral Bioinformatics Resource Center", "PATRIC" ; skos:inScheme "biomedical", "genomics", "health", "microbiology" ; adms:status "Inactive" ; foaf:homepage . kgr:pbpko a schema1:Ontology ; rdfs:label "Physiologically-Based Pharmacokinetic Ontology" ; dcterms:description "An ontology for modeling and understanding of pharmacokinetics in biological systems." ; dcterms:identifier "pbpko" ; dcterms:license ; schema1:hasPart kgr:pbpko.json, kgr:pbpko.obo, kgr:pbpko.owl ; schema1:name "Physiologically-Based Pharmacokinetic Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:pcl a schema1:Ontology ; rdfs:label "Provisional Cell Ontology" ; dcterms:description "Cell types that are provisionally defined by experimental techniques such as single cell or single nucleus transcriptomics rather than a straightforward & coherent set of properties." ; dcterms:identifier "pcl" ; dcterms:license ; schema1:hasPart kgr:pcl-base.json, kgr:pcl-base.obo, kgr:pcl-base.owl, kgr:pcl-full.json, kgr:pcl-full.obo, kgr:pcl-full.owl, kgr:pcl-simple.json, kgr:pcl-simple.obo, kgr:pcl-simple.owl, kgr:pcl.json, kgr:pcl.obo, kgr:pcl.owl ; schema1:name "Provisional Cell Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:pco a schema1:Ontology ; rdfs:label "Population and Community Ontology" ; dcterms:description "An ontology about groups of interacting organisms such as populations and communities" ; dcterms:identifier "pco" ; dcterms:license ; schema1:hasPart kgr:pco.owl ; schema1:name "Population and Community Ontology" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:pd_st a schema1:Ontology ; rdfs:label "Platynereis stage ontology" ; dcterms:description "Description unavailable." ; dcterms:identifier "pd_st" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Platynereis stage ontology" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:pdb a schema1:DataSource ; rdfs:label "Protein Data Bank (PDB)" ; dcterms:created "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The global archive of experimentally determined three-dimensional structures of proteins, nucleic acids, and macromolecular complexes." ; dcterms:identifier "pdb" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:pdb.archive, kgr:pdb.data-api, kgr:pdb.portal, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "Protein Data Bank (PDB)" ; skos:altLabel "PDB", "Protein Data Bank" ; skos:inScheme "biological systems", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:pdbe a schema1:Aggregator ; rdfs:label "PDBe Knowledge Base" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PDBe-KB (Protein Data Bank in Europe - Knowledge Base) is an open, collaborative consortium for integration and enrichment of 3D-structure data and functional annotations to enable basic and translational research. It provides comprehensive access to macromolecular structure data integrated with functional annotations from multiple sources." ; dcterms:identifier "pdbe" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-08T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:genecards.protein.structures, kgr:goa.pdb, kgr:pdbe.download-service, kgr:pdbe.kb-api, kgr:pdbe.kb-ftp, kgr:pdbe.kb-graph-database.neo4j3, kgr:pdbe.kb-graph-database.neo4j4, kgr:pdbe.kb-manual, kgr:pdbe.kb-portal, kgr:pdbe.kb-schema, kgr:pdbe.sifts, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "PDBe Knowledge Base" ; doap:repository ; skos:inScheme "anatomy and development", "biomedical", "genomics", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:pdro a schema1:Ontology ; rdfs:label "The Prescription of Drugs Ontology" ; dcterms:description "An ontology to describe entities related to prescription of drugs" ; dcterms:identifier "pdro" ; dcterms:license ; schema1:hasPart kgr:pdro.owl ; schema1:name "The Prescription of Drugs Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:pdsp a schema1:DataSource ; rdfs:label "Psychoactive Drug Screening Program" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Psychoactive Drug Screening Program (PDSP) at UNC Chapel Hill provides screening of novel psychoactive compounds for pharmacological and functional activity at cloned human or rodent CNS receptors, channels, and transporters. The PDSP Ki Database contains binding affinities for thousands of drugs and drug candidates at neuroreceptors, providing critical pharmacological data for drug discovery and neuroscience research." ; dcterms:identifier "pdsp" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:pdsp.data, kgr:pdsp.protocols, kgr:pdsp.web ; schema1:identifier "pdsp" ; schema1:name "Psychoactive Drug Screening Program" ; skos:altLabel "NIMH PDSP", "PDSP" ; skos:inScheme "biomedical", "drug discovery", "neuroscience", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:pdumdv a schema1:Ontology ; rdfs:label "Platynereis Developmental Stages" ; dcterms:description "Life cycle stages for Platynereis dumerilii" ; dcterms:identifier "pdumdv" ; dcterms:license ; schema1:hasPart kgr:pdumdv.obo, kgr:pdumdv.owl ; schema1:name "Platynereis Developmental Stages" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:peco a schema1:Ontology ; rdfs:label "Plant Experimental Conditions Ontology" ; dcterms:description "A structured, controlled vocabulary which describes the treatments, growing conditions, and/or study types used in plant biology experiments." ; dcterms:identifier "peco" ; dcterms:license ; schema1:hasPart kgr:peco.obo, kgr:peco.owl ; schema1:name "Plant Experimental Conditions Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:petagraph a schema1:KnowledgeGraph ; rdfs:label "Petagraph" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Petagraph is a large-scale biomedical knowledge graph that encompasses over 32 million nodes and 118 million relationships, integrating multi-omics and clinical data. Built on the Unified Biomedical Knowledge Graph (UBKG), Petagraph leverages more than 180 ontologies and standards to embed millions of quantitative genomics data points within a richly connected annotation environment." ; dcterms:identifier "petagraph" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:petagraph.graph ; schema1:name "Petagraph" ; doap:repository ; skos:inScheme "biomedical", "genomics", "health" ; adms:status "Active" ; foaf:homepage . kgr:pf1600 a schema1:Dataset ; rdfs:label "pf1600 Dataset" ; dcterms:created "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The pf1600 dataset is a large-scale metabolomics and trait resource spanning ~1,600 plant food samples, with accompanying taxonomy and sample metadata. It provides processed feature tables, annotations, and scripts for reproducible analyses." ; dcterms:identifier "pf1600" ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:emikg.kg, kgr:emikg.sparql, kgr:emikg.web, kgr:pf1600.archive ; schema1:identifier "pf1600" ; schema1:name "pf1600 Dataset" ; doap:repository ; skos:inScheme "biological systems", "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:pfam a schema1:DataSource ; rdfs:label "Pfam" ; dcterms:created "2025-05-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Pfam is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs), providing annotations of protein domains and functional sites." ; dcterms:hasVersion "37.0" ; dcterms:identifier "pfam" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:pfam.a.data, kgr:pfam.a.fullalignment, kgr:pfam.a.models, kgr:pfam.a.seedalignment, kgr:pfam.api, kgr:pfam.site, kgr:spoke.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:identifier "pfam" ; schema1:name "Pfam" ; skos:inScheme "proteomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:pfocr a schema1:DataSource ; rdfs:label "PFOCR" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Pathway Figure OCR (PFOCR) is a resource that extracts biological pathway information from figures in scientific publications using optical character recognition (OCR) and machine learning. PFOCR automatically identifies pathway diagrams in published literature, extracts gene and protein names from pathway figures, and creates structured pathway data. The resource enables discovery of pathway knowledge that exists only in figure format and is not captured in article text or structured databases." ; dcterms:identifier "pfocr" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:pfocr.api, kgr:pfocr.data, kgr:pfocr.web ; schema1:identifier "pfocr" ; schema1:name "PFOCR" ; doap:repository ; skos:altLabel "PFOCR", "Pathway Figure OCR" ; skos:inScheme "biomedical", "literature", "pathways", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:pgdso a schema1:Ontology ; rdfs:label "Plant Growth and Development Stage" ; dcterms:description "Description unavailable." ; dcterms:identifier "pgdso" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Plant Growth and Development Stage" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:pgo a schema1:Ontology ; rdfs:label "Pseudogene Ontology" ; dcterms:created "2025-11-11T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Pseudogene Ontology (PGO) is an ontology for classifying and annotating pseudogenes based on their evolutionary origins, functional characteristics, and genomic features. Pseudogenes are genomic loci that resemble functional genes but have lost their coding capacity through various mechanisms including frameshift mutations, premature stop codons, or loss of regulatory elements. PGO provides a structured vocabulary for describing different types of pseudogenes (processed, duplicated, unitary) and their relationships to functional genes." ; dcterms:identifier "pgo" ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Pseudogene Ontology" ; skos:altLabel "PGO", "pseudo" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage . kgr:pgxmine a schema1:DataSource ; rdfs:label "PGxMine" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PGxMine uses text mining to identify pharmacogenomic associations between chemicals and genetic variants in the biomedical literature to assist curation of PharmGKB. The system uses the Kindred relation classifier along with PubTator annotations to extract chemical-variant associations from PubMed, PubMed Central Open Access, and PubMed Central Author Manuscript Collection." ; dcterms:identifier "pgxmine" ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:pgxmine.code, kgr:pgxmine.collated, kgr:pgxmine.sentences, kgr:pgxmine.viewer ; schema1:identifier "pgxmine" ; schema1:name "PGxMine" ; doap:repository ; skos:altLabel "PGxMine" ; skos:inScheme "genomics", "literature", "pharmacology", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:pharmacodb a schema1:DataSource ; rdfs:label "PharmacoDB" ; dcterms:created "2025-01-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PharmacoDB is a comprehensive integrative pharmacogenomics database that aggregates and standardizes large-scale cancer drug screening studies to enable systematic exploration and comparison of drug response phenotypes across diverse cancer cell line models. The database addresses critical challenges in pharmacogenomics research by harmonizing disparate datasets that historically used heterogeneous formats for drug sensitivity measurements and lacked standardized identifiers for cell lines and compounds. PharmacoDB integrates multiple major cancer pharmacogenomic datasets including the Cancer Cell Line Encyclopedia (CCLE), Genomics of Drug Sensitivity in Cancer (GDSC), Cancer Therapeutics Response Portal (CTRP), and others, assembling them into a unified queryable resource. The database contains dose-response data for over 56,000 compounds tested across approximately 1,758 cancer cell lines representing 30 different tissue types, with more than 6.3 million individual drug screening experiments profiling sensitivity measurements. Users can search across all integrated studies to identify instances where a specific compound or cell line has been characterized, visualize and compare dose-response curves for particular cell line-compound pairs from different datasets, and explore patterns of drug sensitivity across tissue types. PharmacoDB provides both a user-friendly web interface for interactive browsing and data visualization, as well as a RESTful JSON API for programmatic access enabling computational workflows and large-scale analyses. The database is designed to support biomarker discovery, drug repurposing investigations, and comparative pharmacogenomics studies by providing standardized access to otherwise fragmented cancer drug screening data." ; dcterms:identifier "pharmacodb" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-01-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:pharmacodb.api, kgr:pharmacodb.documentation, kgr:pharmacodb.portal ; schema1:name "PharmacoDB" ; doap:repository ; skos:altLabel "BHKLAB PharmacoDB", "PharmacoDB" ; skos:inScheme "genomics", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:pharmacotherapydb a schema1:DataSource ; rdfs:label "PharmacotherapyDB" ; dcterms:created "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PharmacotherapyDB is a curated catalog of medical indications between small molecule compounds and complex human diseases. It was created as part of a network-based drug repurposing project and differentiates between disease-modifying (DM) and symptomatic (SYM) treatments, with each indication reviewed by multiple physicians. The initial release contains 97 diseases and 601 drugs, with 755 disease-modifying therapies, 390 symptomatic therapies, and 243 non-indications. The catalog uses standardized vocabularies (Disease Ontology and DrugBank) to facilitate data integration and adheres to pathophysiological principles." ; dcterms:identifier "pharmacotherapydb" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data ; schema1:identifier "pharmacotherapydb" ; schema1:name "PharmacotherapyDB" ; skos:inScheme "biomedical", "drug discovery", "pharmacology" ; adms:status "Inactive" ; foaf:homepage . kgr:pharmdb a schema1:KnowledgeGraph ; rdfs:label "PharmDB" ; dcterms:created "2025-09-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PharmDB (PharmDB-K) is a pharmacological knowledge graph integrating drugs, targets, diseases, indications, and related biomedical entities to facilitate computational repositioning and network pharmacology analyses." ; dcterms:identifier "pharmdb" ; dcterms:modified "2025-09-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:pharmdb.graph, kgr:pharmdb.portal ; schema1:name "PharmDB" ; skos:inScheme "biomedical", "drug discovery" ; adms:status "Orphaned" ; foaf:homepage . kgr:pharmgkb a schema1:Resource ; rdfs:label "PharmGKB" ; dcterms:created "2025-05-01T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PharmGKB collects, curates and disseminates knowledge about clinically actionable gene-drug associations and genotype-phenotype relationships." ; dcterms:identifier "pharmgkb" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:genecards.pharmacogenomics, kgr:ibkh.graph, kgr:obo-db-ingest.pharmgkb.disease.json, kgr:obo-db-ingest.pharmgkb.disease.obo, kgr:obo-db-ingest.pharmgkb.disease.owl, kgr:obo-db-ingest.pharmgkb.disease.sssom.tsv, kgr:obo-db-ingest.pharmgkb.drug.json, kgr:obo-db-ingest.pharmgkb.drug.obo, kgr:obo-db-ingest.pharmgkb.drug.owl, kgr:obo-db-ingest.pharmgkb.drug.sssom.tsv, kgr:obo-db-ingest.pharmgkb.gene.json, kgr:obo-db-ingest.pharmgkb.gene.obo, kgr:obo-db-ingest.pharmgkb.gene.owl, kgr:obo-db-ingest.pharmgkb.gene.sssom.tsv, kgr:obo-db-ingest.pharmgkb.pathways.json, kgr:obo-db-ingest.pharmgkb.pathways.obo, kgr:obo-db-ingest.pharmgkb.pathways.owl, kgr:obo-db-ingest.pharmgkb.variant.json, kgr:obo-db-ingest.pharmgkb.variant.obo, kgr:obo-db-ingest.pharmgkb.variant.owl, kgr:obo-db-ingest.pharmgkb.variant.sssom.tsv, kgr:pharmgkb.automatedannotations, kgr:pharmgkb.chemicals, kgr:pharmgkb.clinicalannotations, kgr:pharmgkb.clinicalannotations.loe, kgr:pharmgkb.clinicalvariants, kgr:pharmgkb.druglabels, kgr:pharmgkb.drugs, kgr:pharmgkb.genes, kgr:pharmgkb.guidelineannotations, kgr:pharmgkb.haplotypefrequencies.allofus, kgr:pharmgkb.haplotypefrequencies.ukbb, kgr:pharmgkb.literatureoccurrences, kgr:pharmgkb.papers, kgr:pharmgkb.pathways.biopax, kgr:pharmgkb.pathways.json, kgr:pharmgkb.pathways.tsv, kgr:pharmgkb.phenotypes, kgr:pharmgkb.relationships, kgr:pharmgkb.variantannotations, kgr:pharmgkb.variants, kgr:pharmkg.graph ; schema1:identifier "pharmgkb" ; schema1:name "PharmGKB" ; doap:repository ; skos:inScheme "chemistry and biochemistry", "genomics", "health", "pharmacology", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:pharmkg a schema1:KnowledgeGraph ; rdfs:label "PharmKG" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PharmKG is a multi-relational, attributed biomedical knowledge graph benchmark that integrates curated databases and literature-derived relationships to link genes, drugs (chemicals), and diseases. It contains ~500,000 typed relations across ~7,600–8,000 disambiguated entities (29 relation types), with domain-specific features for entities from multi-omics sources (e.g., gene expression, chemical structure, disease embeddings). It provides baselines for knowledge graph embedding and a neural network-based method, and supports downstream tasks such as drug repurposing and target identification." ; dcterms:identifier "pharmkg" ; dcterms:isReferencedBy ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:pharmkg.graph ; schema1:name "PharmKG" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "health", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:pharos a schema1:Aggregator ; rdfs:label "Pharos" ; dcterms:created "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Pharos is the user interface to the Target Central Resource Database (TCRD), providing comprehensive information about protein targets with a focus on the druggable genome. Developed by the NIH Illuminating the Druggable Genome (IDG) program, Pharos classifies targets into four Target Development Levels (TDLs) - Tclin (targets with approved drugs), Tchem (targets with high-quality chemical probes), Tbio (targets with biological data), and Tdark (understudied targets with little functional knowledge). The platform integrates data from over 80 datasets covering protein structure, function, pathways, expression, diseases, drugs, ligands, and publications." ; dcterms:identifier "pharos" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:automat.pharos, kgr:pharos.api, kgr:pharos.api.docs, kgr:pharos.docs, kgr:pharos.portal, kgr:pharos.tcrd.download ; schema1:identifier "pharos" ; schema1:name "Pharos" ; doap:repository ; skos:altLabel "IDG Pharos", "Pharos", "TCRD", "Target Central Resource Database" ; skos:inScheme "biomedical", "drug discovery", "health", "pharmacology", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:pheknowlator a schema1:KnowledgeGraph ; rdfs:label "PheKnowLator" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PheKnowLator (Phenotype Knowledge Translator; pkt_kg) is a customizable knowledge graph (KG) construction framework enabling users to build large, heterogeneous KGs that are Semantic Web compliant and amenable to OWL reasoning, generate property graphs, and export to formats compatible with popular graph toolkits. The project provides configurable build recipes (e.g., OWL, property graph), reproducible pipelines, and documentation for deployment and usage in the GitHub Wiki." ; dcterms:identifier "pheknowlator" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-08-26T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:mgmlink.code, kgr:pheknowlator.code, kgr:pheknowlator.doc, kgr:pheknowlator.graph ; schema1:name "PheKnowLator" ; doap:repository ; skos:inScheme "biomedical", "genomics", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:phenio a schema1:Resource ; rdfs:label "An integrated ontology for Phenomics" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "An ontology for accessing and comparing knowledge concerning phenotypes across species and genetic backgrounds." ; dcterms:identifier "phenio" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:kg-monarch.phenio.semsql, kgr:phenio.graph, kgr:phenio.model ; schema1:identifier "phenio" ; schema1:name "An integrated ontology for Phenomics" ; doap:repository ; skos:inScheme "phenotype" ; adms:status "Active" ; foaf:homepage . kgr:phewascat a schema1:Aggregator ; rdfs:label "PheWAS Catalog" ; dcterms:created "2025-09-24T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The PheWAS Catalog is an aggregator of phenome-wide association studies that systematically analyzes many phenotypes compared to single genetic variants. It aggregates results from electronic medical record (EMR) data analysis, combining genetic association data from multiple biobanks and clinical databases to enable comprehensive phenotype-genotype association discovery." ; dcterms:identifier "phewascat" ; dcterms:isReferencedBy ; dcterms:modified "2025-09-24T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:disgenet.data, kgr:phewascat.associations, kgr:phewascat.phecodes, kgr:phewascat.portal, kgr:phewascat.rpackage ; schema1:name "PheWAS Catalog" ; doap:repository ; skos:inScheme "biomedical", "clinical", "genomics", "precision medicine" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:phipo a schema1:Ontology ; rdfs:label "Pathogen Host Interaction Phenotype Ontology" ; dcterms:description "PHIPO is a formal ontology of species-neutral phenotypes observed in pathogen-host interactions." ; dcterms:identifier "phipo" ; dcterms:license ; schema1:hasPart kgr:phipo.obo, kgr:phipo.owl ; schema1:name "Pathogen Host Interaction Phenotype Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:phosphositeplus a schema1:Aggregator ; rdfs:label "PhosphoSitePlus" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PhosphoSitePlus is a comprehensive resource for experimentally validated post-translational modifications (PTMs) with emphasis on phosphorylation, ubiquitination, acetylation, methylation and more. It aggregates curated site-specific modification data, kinase–substrate relationships, protein domains, mutation impact annotations, sequence motifs, and pathway/interaction context to support signaling, proteomics, and systems biology research." ; dcterms:identifier "phosphositeplus" ; dcterms:isReferencedBy ; dcterms:modified "2025-09-11T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:kinace.portal, kgr:phosphositeplus.about, kgr:phosphositeplus.downloads, kgr:phosphositeplus.portal, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:name "PhosphoSitePlus" ; skos:inScheme "biological systems", "biomedical", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:pid a schema1:DataSource ; rdfs:label "Pathway Interaction Database" ; dcterms:created "2025-01-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Pathway Interaction Database (PID) was a highly curated collection of human molecular signaling, regulatory pathways, and key cellular processes developed through a collaboration between the US National Cancer Institute and Nature Publishing Group. The database focused specifically on cancer-relevant signaling and regulatory pathways rather than metabolic processes, providing detailed network-level representations of molecular interactions with comprehensive literature citations and evidence codes for each event. PID contained three main data collections the NCI-Nature Curated pathways representing expert-curated cancer signaling networks, imported Reactome pathways in BioPAX format, and BioCarta pathway data, together comprising 77 expert-reviewed pathways with over 4,300 manually curated interactions involving more than 2,600 proteins annotated with detailed posttranslational modifications including 7,400+ phosphorylation events. Each interaction in the NCI-Nature curated collection was associated with specific literature references from over 3,100 distinct PubMed citations and annotated with evidence codes indicating the type of experimental support. The database employed a sophisticated data model distinguishing five types of molecular events including transcription, translocation, biochemical reactions, protein modifications, and macroprocesses, with molecules characterized by posttranslational modifications, cellular locations, and activity states. PID provided powerful query capabilities enabling users to search by molecule names, construct dynamic interaction networks connecting specified molecules, overlay experimental data from gene expression studies onto pathways using batch query tools with statistical enrichment analysis, and visualize both predefined expert-curated pathways and novel networks generated computationally from the interaction database. The resource was particularly valuable for cancer research, allowing identification of parallel signaling paths, elucidation of therapy resistance mechanisms, and integration of genomic abnormalities with pathway contexts. While the original NCI-hosted PID website is no longer actively maintained and was discontinued, the complete PID dataset has been preserved and remains accessible through Pathway Commons, NDEx Bioscience Network Exchange, and as BioPAX Level 2 format exports, ensuring continued availability of this valuable curated knowledge for the research community." ; dcterms:identifier "pid" ; dcterms:isReferencedBy ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:spoke.graph ; schema1:name "Pathway Interaction Database" ; doap:repository ; skos:altLabel "NCI-Nature PID", "PID", "Pathway Interaction Database" ; skos:inScheme "biological systems", "pathways" ; adms:status "Inactive" ; foaf:homepage . kgr:pirbase a schema1:Aggregator ; rdfs:label "piRBase" ; dcterms:created "2014-01-01T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "piRBase is a manually curated database for PIWI-interacting RNAs (piRNAs), focused on piRNA functional analysis and annotation. It integrates high-throughput sequencing data from multiple organisms and provides comprehensive information about piRNA sequences, genomic locations, functional annotations, and epigenetic features." ; dcterms:identifier "pirbase" ; dcterms:isReferencedBy , , ; dcterms:modified "2025-10-21T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:pirbase.browse, kgr:pirbase.cel-sequences, kgr:pirbase.dme-bed, kgr:pirbase.dme-gold, kgr:pirbase.dme-sequences, kgr:pirbase.dre-sequences, kgr:pirbase.epigenetics, kgr:pirbase.function, kgr:pirbase.genome, kgr:pirbase.hsa-bed, kgr:pirbase.hsa-gold, kgr:pirbase.hsa-grch38-bed, kgr:pirbase.hsa-sequences, kgr:pirbase.mmu-bed, kgr:pirbase.mmu-gold, kgr:pirbase.mmu-sequences, kgr:pirbase.portal, kgr:pirbase.rno-sequences, kgr:pirbase.tools, kgr:pirbase.tutorial, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "piRBase" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:pistoia-pgo a schema1:Ontology ; rdfs:label "Pistoia Alliance Pharma General Ontology" ; dcterms:created "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Pistoia Alliance Pharma General Ontology (PGO) is a collaborative initiative to provide a shared upper-level reference ontology for the pharmaceutical industry. PGO aims to serve as a \"Rosetta Stone\" enabling semantic interoperability within and across organizations by identifying key concepts used throughout the drug development lifecycle and selecting public resources that can provide identifiers for each concept. Rather than creating new ontologies or mandating specific terminologies, PGO focuses on providing clear mechanisms to enable unambiguous declaration of the resources used and capturing the criteria for selecting semantic artifacts. The project follows FAIR principles and reuses existing semantic resources, including ontologies and controlled terminologies, as well as open source community software. The initial phase focuses on Research & Development (R&D) operations, defining core concepts and recommendations for associating controlled terminologies to service data exchange among pharmaceutical industry stakeholders. PGO is developed using LinkML for representing and documenting each type, and is supported by a consortium of major pharmaceutical companies including AstraZeneca, Chiesi Group, GSK, Merck KGaA, Novo Nordisk, Pfizer, and Hoffmann-La Roche." ; dcterms:identifier "pistoia-pgo" ; dcterms:license ; dcterms:modified "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:pistoia-pgo.core_concepts, kgr:pistoia-pgo.documentation, kgr:pistoia-pgo.github, kgr:pistoia-pgo.use_cases ; schema1:name "Pistoia Alliance Pharma General Ontology" ; doap:repository ; skos:altLabel "PGO", "Pharma General Ontology" ; skos:inScheme "drug discovery", "upper" ; adms:status "Active" ; foaf:homepage . kgr:plana a schema1:Ontology ; rdfs:label "planaria-ontology" ; dcterms:description "PLANA, the planarian anatomy ontology, encompasses the anatomy and life cycle stages for both __Schmidtea mediterranea__ biotypes." ; dcterms:identifier "plana" ; dcterms:license ; schema1:hasPart kgr:plana.obo, kgr:plana.owl ; schema1:name "planaria-ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:planp a schema1:Ontology ; rdfs:label "Planarian Phenotype Ontology" ; dcterms:description "Planarian Phenotype Ontology is an ontology of phenotypes observed in the planarian Schmidtea mediterranea." ; dcterms:identifier "planp" ; dcterms:license ; schema1:hasPart kgr:planp.obo, kgr:planp.owl ; schema1:name "Planarian Phenotype Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:plant-reactome a schema1:DataSource ; rdfs:label "Plant Reactome" ; dcterms:created "2025-12-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Plant Reactome is a freely-accessible, open-source pathway knowledgebase for comparative pathway analysis and systems biology in plants. It provides manually curated pathways in rice with gene-orthology based projections across 129 plant species." ; dcterms:identifier "plant-reactome" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2025-12-17T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , , , , , , , , , , , , , , , , ; schema1:hasPart kgr:plant-reactome.api, kgr:plant-reactome.biopax, kgr:plant-reactome.mappings, kgr:plant-reactome.png, kgr:plant-reactome.portal, kgr:plant-reactome.sbgn, kgr:plant-reactome.svg ; schema1:identifier "plant-reactome" ; schema1:name "Plant Reactome" ; doap:repository ; skos:inScheme "pathways", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:gramene . kgr:plncdb a schema1:DataSource ; rdfs:label "PLncDB" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PLncDB (Plant Long noncoding RNA Database) is a comprehensive encyclopedia of plant long noncoding RNAs containing 1,246,372 lncRNAs from 80 plant species, ranging from chlorophytes to angiosperms. The database provides uniform lncRNA annotations using a standard pipeline across 13,834 RNA-Seq datasets, integrating expression patterns across tissues, developmental stages, and stress conditions. It includes epigenetic modification data (DNA methylation, histone modifications), predicted lncRNA targets (miRNA mimics and RNA-protein interactions), and tools for visualization (JBrowse, eFP Browser, EPexplorer). PLncDB also incorporates validated lncRNAs from EVLncRNAs and plant lncRNA candidates from RNAcentral." ; dcterms:identifier "plncdb" ; dcterms:isReferencedBy , ; dcterms:modified "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:plncdb.blast, kgr:plncdb.efp-browser, kgr:plncdb.epexplorer, kgr:plncdb.ftp, kgr:plncdb.jbrowse, kgr:plncdb.portal, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "PLncDB" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:plo a schema1:Ontology ; rdfs:label "Plasmodium life cycle" ; dcterms:description "Description unavailable." ; dcterms:identifier "plo" ; dcterms:license "Not specified" ; schema1:name "Plasmodium life cycle" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:po a schema1:Ontology ; rdfs:label "Plant Ontology" ; dcterms:description "The Plant Ontology is a structured vocabulary and database resource that links plant anatomy, morphology and growth and development to plant genomics data." ; dcterms:identifier "po" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:po.obo, kgr:po.owl ; schema1:name "Plant Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:pombase a schema1:Resource ; rdfs:label "PomBase" ; dcterms:created "2025-03-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PomBase is a comprehensive database for the fission yeast Schizosaccharomyces pombe, providing structural and functional annotation, literature curation and access to large-scale data sets." ; dcterms:identifier "pombase" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:pombase.genes, kgr:pombase.genes-products, kgr:pombase.to-uniprot, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:identifier "pombase" ; schema1:name "PomBase" ; doap:repository ; skos:inScheme "organisms" ; adms:status "Active" ; foaf:homepage . kgr:poro a schema1:Ontology ; rdfs:label "Porifera Ontology" ; dcterms:description "An ontology covering the anatomy of the taxon Porifera (sponges)" ; dcterms:identifier "poro" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:poro.obo, kgr:poro.owl ; schema1:name "Porifera Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:ppo a schema1:Ontology ; rdfs:label "Plant Phenology Ontology" ; dcterms:description "An ontology for describing the phenology of individual plants and populations of plants, and for integrating plant phenological data across sources and scales." ; dcterms:identifier "ppo" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:ppo.owl ; schema1:name "Plant Phenology Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:pr a schema1:Ontology ; rdfs:label "PRotein Ontology (PRO)" ; dcterms:description "An ontological representation of protein-related entities" ; dcterms:identifier "pr" ; dcterms:license ; schema1:hasPart kgr:drugmechdb.graph, kgr:efo.obo, kgr:efo.owl, kgr:mechreponet.kg, kgr:microbiomekg.api, kgr:pheknowlator.graph, kgr:pr-asserted.obo, kgr:pr-asserted.owl, kgr:pr.obo, kgr:pr.owl, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes ; schema1:name "PRotein Ontology (PRO)" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:preppi a schema1:DataSource ; rdfs:label "PrePPI" ; dcterms:created "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description """PrePPI (Predicting Protein-Protein Interactions) is a computational structure-based database of predicted protein-protein interactions for the human proteome, developed by the Honig Laboratory at Columbia University. The database employs a Bayesian framework that integrates structural information with non-structural supporting evidence to predict protein-protein interactions. PrePPI uses structural modeling to generate putative protein interaction interfaces, scores these structural models, and combines the structural scores with functional clues and other evidence sources to produce confidence scores for predicted interactions. The database provides comprehensive coverage of the human interactome, going beyond experimentally determined interactions to include computationally predicted interactions with varying levels of confidence. PrePPI is particularly valuable for identifying novel protein interactions that may not yet have been experimentally validated but show promise based on structural compatibility and functional context. Users can query the database by entering UniProt accession numbers or common gene/protein names to retrieve interaction partners and supporting evidence. The resource includes a high-confidence interactome subset that can be downloaded, representing predictions with the strongest supporting evidence. PrePPI complements experimental protein interaction databases by providing structure-based predictions that can guide experimental validation efforts and inform systems biology studies of protein interaction networks. The database is freely accessible through a web interface that allows interactive exploration of predicted interactions and their confidence scores. """ ; dcterms:identifier "preppi" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:preppi.download, kgr:preppi.search ; schema1:identifier "preppi" ; schema1:name "PrePPI" ; skos:altLabel "PrePPI", "Predicting Protein-Protein Interactions" ; skos:inScheme "chemistry and biochemistry", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:primekg a schema1:KnowledgeGraph ; rdfs:label "PrimeKG" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PrimeKG (Precision Medicine Knowledge Graph) integrates 20 high-quality biomedical resources to describe 17,080 diseases with over 4 million relationships across ten major biological scales." ; dcterms:identifier "primekg" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:primekg.graph ; schema1:identifier "primekg" ; schema1:name "PrimeKG" ; doap:repository ; skos:inScheme "biomedical", "health", "pathways", "precision medicine", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:prism a schema1:DataSource ; rdfs:label "PRISM" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PRISM (Profiling Relative Inhibition Simultaneously in Mixtures) is a high-throughput drug screening technology developed by the Broad Institute that measures the sensitivity of cancer cell lines to therapeutic compounds. PRISM uses DNA barcoding to pool hundreds of cell lines together, enabling massively parallel drug screening at unprecedented scale. The platform is integrated into the Cancer Dependency Map (DepMap) project and provides comprehensive dose-response data for drug-cancer cell line interactions." ; dcterms:identifier "prism" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:prism.api, kgr:prism.datasets, kgr:prism.portal ; schema1:identifier "prism" ; schema1:name "PRISM" ; doap:repository ; skos:altLabel "PRISM", "Profiling Relative Inhibition Simultaneously in Mixtures" ; skos:inScheme "biomedical", "drug discovery", "health", "pharmacology", "precision medicine" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:broad . kgr:proco a schema1:Ontology ; rdfs:label "Process Chemistry Ontology" ; dcterms:description "PROCO covers process chemistry, the chemical field concerned with scaling up laboratory syntheses to commercially viable processes." ; dcterms:identifier "proco" ; dcterms:license ; schema1:hasPart kgr:proco.owl ; schema1:name "Process Chemistry Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:progenomes a schema1:DataSource ; rdfs:label "proGenomes" ; dcterms:created "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A large-scale microbial genome resource with consistent annotation, species clustering, and downloadable representative genome and protein datasets." ; dcterms:identifier "progenomes" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:progenomes.pg4.ncbi-taxonomy, kgr:progenomes.pg4.rep-proteins, kgr:progenomes.portal, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "proGenomes" ; skos:altLabel "ProGenomes Database", "proGenomes" ; skos:inScheme "biological systems", "genomics", "microbiology" ; adms:status "Active" ; foaf:homepage . kgr:progeny a schema1:DataSource ; rdfs:label "PROGENy" ; dcterms:created "2025-11-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PROGENy (Pathway RespOnsive GENes for activity inference) is a resource that leverages a large compendium of publicly available signaling perturbation experiments to yield a common core of pathway responsive genes for human and mouse. These pathway signatures, coupled with statistical methods, can be used to infer pathway activities from bulk or single-cell transcriptomics data. PROGENy is available as an R package on Bioconductor and supports analysis of both human and mouse data across 14 signaling pathways." ; dcterms:identifier "progeny" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:bioteque.embeddings, kgr:progeny.docs, kgr:progeny.rpackage ; schema1:name "PROGENy" ; doap:repository ; skos:altLabel "PROGENy", "Pathway RespOnsive GENes" ; skos:inScheme "biomedical", "genomics", "pathways", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:saezlab . kgr:propreo a schema1:Ontology ; rdfs:label "Proteomics data and process provenance" ; dcterms:description "Description unavailable." ; dcterms:identifier "propreo" ; dcterms:license "Not specified" ; schema1:name "Proteomics data and process provenance" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:protcid a schema1:DataSource ; rdfs:label "ProtCID" ; dcterms:created "2025-05-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Protein Common Interface Database (ProtCID) provides comprehensive, PDB-wide structural information on protein interactions, identifying and clustering interfaces observed in multiple crystal forms of homologous proteins." ; dcterms:hasVersion "3.0" ; dcterms:identifier "protcid" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:protcid.database, kgr:protcid.site, kgr:spoke.graph ; schema1:name "ProtCID" ; skos:inScheme "biological systems", "chemistry and biochemistry", "proteomics" ; skos:related "core" ; adms:status "Active" ; foaf:homepage . kgr:proteomehd a schema1:DataSource ; rdfs:label "ProteomeHD" ; dcterms:created "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ProteomeHD is a proteomics resource centered on protein co-regulation evidence across perturbation experiments, used in integrated protein association resources." ; dcterms:identifier "proteomehd" ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:proteomehd.data, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "ProteomeHD" ; skos:inScheme "biomedical", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:proton a schema1:Ontology ; rdfs:label "PROTON (PROTo ONtology)" ; dcterms:created "2025-12-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PROTON (PROTo ONtology) is a lightweight upper-level ontology serving as a foundational modeling basis for semantic web applications. It provides a modular framework with approximately 542 entity classes and 183 properties, covering named entities, temporal concepts, quantitative domains, and abstract concepts. Designed for information extraction, semantic annotation, knowledge management, and linked data integration." ; dcterms:hasVersion "3.0 Beta" ; dcterms:identifier "proton" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:openbiodiv.ontology.ttl, kgr:proton.browser, kgr:proton.documentation, kgr:proton.ontology, kgr:proton.top ; schema1:identifier "proton" ; schema1:name "PROTON (PROTo ONtology)" ; doap:repository ; skos:altLabel "PROTON 3.0", "PROTON Top", "PROTo ONtology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ontotext . kgr:prsatlas a schema1:DataSource ; rdfs:label "PRS Atlas" ; dcterms:created "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The PRS Atlas is a comprehensive resource analyzing 162 polygenic risk scores (PRS) derived from genome-wide association studies against 551 heritable traits from the UK Biobank study (N=334,398). The atlas was developed to highlight putative causal relationships across the human phenome using Mendelian randomization approaches. PRS were constructed using independent SNPs (p<5×10⁻⁵) to evaluate associations with complex traits, providing insights into disease susceptibility and potential causal risk factors. The resource includes a web application for querying and visualizing associations between genetic liability and diverse health outcomes." ; dcterms:identifier "prsatlas" ; dcterms:isReferencedBy ; dcterms:modified "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:epigraphdb.graph ; schema1:identifier "prsatlas" ; schema1:name "PRS Atlas" ; skos:altLabel "Polygenic Risk Score Atlas" ; skos:inScheme "biomedical", "genomics", "translational" ; adms:status "Inactive" ; foaf:homepage . kgr:psdo a schema1:Ontology ; rdfs:label "Performance Summary Display Ontology" ; dcterms:description "Ontology to reproducibly study visualizations of clinical performance" ; dcterms:identifier "psdo" ; dcterms:license ; schema1:hasPart kgr:psdo.owl ; schema1:name "Performance Summary Display Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:pso a schema1:Ontology ; rdfs:label "Plant Stress Ontology" ; dcterms:description "The Plant Stress Ontology describes biotic and abiotic stresses that a plant may encounter." ; dcterms:identifier "pso" ; dcterms:license ; schema1:hasPart kgr:pso.obo, kgr:pso.owl ; schema1:name "Plant Stress Ontology" ; doap:repository ; skos:inScheme "agriculture" ; adms:status "Active" ; foaf:homepage . kgr:psygenet a schema1:DataSource ; rdfs:label "PsyGeNET" ; dcterms:created "2025-07-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PsyGeNET is a knowledge resource on psychiatric disorders and their associated genes, integrating expert-curated and text-mined data from the literature. It provides gene-disease associations for psychiatric disorders, supporting research in psychiatric genetics and genomics." ; dcterms:identifier "psygenet" ; dcterms:isReferencedBy ; dcterms:modified "2025-07-12T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:disgenet.data, kgr:psygenet.genedisease ; schema1:name "PsyGeNET" ; skos:inScheme "biomedical", "genomics" ; adms:status "Inactive" ; foaf:homepage . kgr:pubchem a schema1:DataSource ; rdfs:label "PubChem" ; dcterms:created "2025-05-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PubChem is an open chemistry database that collects information on chemical structures, identifiers, chemical and physical properties, biological activities, patents, health, safety, toxicity data, and other information." ; dcterms:identifier "pubchem" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:biomarkerkg.nodes.compound, kgr:forum.graph.dump, kgr:icees-kg.graph, kgr:icees-kg.metadata, kgr:icees-kg.trapi, kgr:microbiomekg.api, kgr:pharmkg.graph, kgr:pubchem.bioassay.asn, kgr:pubchem.bioassay.xml, kgr:pubchem.compounds.asn, kgr:pubchem.compounds.sdf, kgr:pubchem.pug.rest, kgr:pubchem.substances.asn, kgr:pubchem.substances.sdf, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "pubchem" ; schema1:name "PubChem" ; doap:repository ; skos:inScheme "chemistry and biochemistry", "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:pubmed a schema1:Aggregator ; rdfs:label "PubMed and MEDLINE" ; dcterms:created "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PubMed is a free search engine accessing primarily the MEDLINE database of references and abstracts on life sciences and biomedical topics, maintained by the United States National Library of Medicine (NLM) at the National Institutes of Health (NIH). MEDLINE is NLM's premier bibliographic database containing more than 31 million references to journal articles indexed with Medical Subject Headings (MeSH). PubMed comprises more than 39 million citations for biomedical literature from MEDLINE, life science journals, and online books, with citations including links to full-text content from PubMed Central and publisher web sites. The database is updated daily and covers publications from the 1950s to the present." ; dcterms:identifier "pubmed" ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:amyco.annotations, kgr:atom.kg, kgr:forum.graph.dump, kgr:genecards.literature, kgr:indra.cogex.code, kgr:ncbigene.gene2pubmed, kgr:omnicorp.api, kgr:omnicorp.cooccurrence, kgr:pubmed.advanced.search, kgr:pubmed.baseline, kgr:pubmed.clinical.queries, kgr:pubmed.dtd, kgr:pubmed.eutils, kgr:pubmed.help, kgr:pubmed.portal, kgr:pubmed.updates, kgr:spoke.graph ; schema1:identifier "pubmed" ; schema1:name "PubMed and MEDLINE" ; doap:repository ; skos:altLabel "MEDLARS", "MEDLINE", "MEDLINE via PubMed", "PubMed" ; skos:inScheme "biomedical", "clinical", "health", "literature" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:pubmedcentral a schema1:DataSource ; rdfs:label "PubMed Central (PMC)" ; dcterms:created "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The U.S. National Library of Medicine's free full-text archive of biomedical and life sciences journal literature." ; dcterms:identifier "pubmedcentral" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:pubmedcentral.ftp, kgr:pubmedcentral.oa-api, kgr:pubmedcentral.portal, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "PubMed Central (PMC)" ; skos:altLabel "PMC", "PubMed Central" ; skos:inScheme "biomedical", "literature" ; adms:status "Active" ; foaf:homepage . kgr:pubtator a schema1:DataSource ; rdfs:label "PubTator" ; dcterms:created "2025-05-15T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "PubTator 3.0 is an AI-powered biomedical literature resource that uses state-of-the-art AI techniques to provide semantic and relation searches for key biomedical entities like proteins, genetic variants, diseases and chemicals. It offers over one billion entity and relation annotations across approximately 36 million PubMed abstracts and 6 million full-text articles from the PMC open access subset, updated weekly." ; dcterms:identifier "pubtator" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:gnbr.graph, kgr:pubtator.api, kgr:pubtator.bulk, kgr:pubtator.site ; schema1:name "PubTator" ; doap:repository ; skos:inScheme "biomedical", "genomics", "health", "literature", "pharmacology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:pw a schema1:Ontology ; rdfs:label "Pathway ontology" ; dcterms:description "A controlled vocabulary for annotating gene products to pathways." ; dcterms:identifier "pw" ; dcterms:license ; schema1:hasPart kgr:pheknowlator.graph, kgr:pw.obo, kgr:pw.owl, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes ; schema1:name "Pathway ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:rampdb a schema1:Database ; rdfs:label "RaMPDB" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "RaMP-DB (Relational database of Metabolomic Pathways) is a multi-sourced integrated database with comprehensive annotations on biological pathways, structure/chemistry, disease and ontology annotations for genes, proteins, and metabolites. RaMP-DB provides a framework for single and batch queries of annotations, and for performing chemical and biological pathway enrichment analyses on multi-omic datasets." ; dcterms:identifier "rampdb" ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:rampdb.api, kgr:rampdb.database ; schema1:identifier "rampdb" ; schema1:name "RaMPDB" ; skos:altLabel "RaMP-DB", "RaMPDB", "Relational database of Metabolomic Pathways" ; skos:inScheme "biomedical", "pathways", "systems biology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncats-rampdb . kgr:rbo a schema1:Ontology ; rdfs:label "Radiation Biology Ontology" ; dcterms:description "RBO is an ontology for the effects of radiation on biota in terrestrial and space environments." ; dcterms:identifier "rbo" ; dcterms:license ; schema1:hasPart kgr:rbo.json, kgr:rbo.obo, kgr:rbo.owl, kgr:rbo.rbo-base.json, kgr:rbo.rbo-base.obo, kgr:rbo.rbo-base.owl ; schema1:name "Radiation Biology Ontology" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:rdbridge a schema1:KnowledgeGraph ; rdfs:label "RDBridge" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Rare Disease Bridge (RDBridge) offers search functions for genes, potential drugs, pathways, literature, and medical imaging data that will support mechanistic research, drug development, diagnosis, and treatment for rare diseases." ; dcterms:identifier "rdbridge" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:rdbridge.graph, kgr:rdbridge.literaturedatabase, kgr:rdbridge.webinterface ; schema1:name "RDBridge" ; doap:repository ; skos:inScheme "biomedical", "clinical", "health", "precision medicine" ; adms:status "unresponsive" ; foaf:homepage . kgr:rdp a schema1:DataSource ; rdfs:label "Ribosomal Database Project" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Ribosomal Database Project (RDP) provided ribosome-related data services, including quality-controlled, aligned and annotated rRNA sequences, phylogenetic trees, and analysis tools for Bacterial, Archaeal, and Fungal rRNA. The RDP website is no longer available, but stand-alone tools and classifiers remain accessible via Sourceforge and community tutorials." ; dcterms:identifier "rdp" ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:rdp.classifier, kgr:rdp.tools, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "Ribosomal Database Project" ; skos:inScheme "biological systems", "genomics" ; adms:status "unresponsive" . kgr:reacto a schema1:Resource ; rdfs:label "Reactome Entity Ontology (REACTO)" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Representation of entities in Reactome" ; dcterms:identifier "reacto" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:reacto.go-lego-reacto.owl, kgr:reacto.owl ; schema1:name "Reactome Entity Ontology (REACTO)" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:reactome a schema1:DataSource ; rdfs:label "Reactome" ; dcterms:created "2025-03-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Reactome is a comprehensive, curated, and peer-reviewed pathway database representing human biological processes. It integrates information on biological molecules including proteins, small molecules, and RNA, organizing them into networks of functional interactions organized as pathways. With sophisticated graph database backend and multiple data access formats, Reactome is an essential resource for systems biology, functional genomics, drug discovery, and biomedical research, providing insights into gene function in the context of cellular and organismal processes." ; dcterms:identifier "reactome" ; dcterms:modified "2025-12-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:bioteque.embeddings, kgr:cam-kp.reactome-cams, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:drugmechdb.graph, kgr:epigraphdb.graph, kgr:genecards.pathway.data, kgr:ibkh.graph, kgr:indra.cogex.code, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:mechreponet.kg, kgr:obo-db-ingest.bigg.metabolite.sssom.tsv, kgr:obo-db-ingest.rhea.sssom.tsv, kgr:pheknowlator.graph, kgr:proteomehd.data, kgr:rampdb.database, kgr:reactome.api, kgr:reactome.biopax, kgr:reactome.browser, kgr:reactome.data.human, kgr:reactome.flat, kgr:reactome.neo4j, kgr:reactome.rdf, kgr:reactome.sbml, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:spoke.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:ubkg.csv, kgr:ubkg.neo4j, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "reactome" ; schema1:name "Reactome" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "pathways", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:rediportal a schema1:DataSource ; rdfs:label "REDIportal" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "REDIportal is a specialized database of A-to-I RNA editing events, integrating ~16 million sites from GTEx and TCGA with links to Ensembl, RNAcentral, UniProt, and PRIDE. The portal supports search by genomic position, sample (GTEx/TCGA), dsRNA modules, and gene view, and reports AEI/REI indices and a deep-learning-based reliability score (REDInet)." ; dcterms:identifier "rediportal" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:rediportal.portal, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "REDIportal" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" . kgr:redrugs a schema1:KnowledgeGraph ; rdfs:label "ReDrugs" ; dcterms:created "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ReDrugs is a probabilistic knowledge graph for drug repositioning that integrates drug-target, protein-protein, and disease-gene interactions from multiple databases. The system uses evidence-weighted nanopublications to assign confidence scores to interactions based on experimental methods and manual curation. ReDrugs was designed to identify novel drug candidates for diseases, particularly melanoma, by filtering and analyzing systems biology networks with probabilistic methods. The platform included both a web interface and API for exploring molecular interaction networks. The web interface appears to be no longer accessible." ; dcterms:identifier "redrugs" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-11-22T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:redrugs.api, kgr:redrugs.web ; schema1:name "ReDrugs" ; doap:repository ; skos:altLabel "ReDrugS" ; skos:inScheme "biomedical", "drug discovery", "pharmacology", "systems biology", "translational" ; adms:status "Inactive" ; foaf:homepage . kgr:refseq a schema1:DataSource ; rdfs:label "RefSeq" ; dcterms:created "2025-07-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The NCBI Reference Sequence Database (RefSeq) provides a comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein sequences for naturally occurring molecules of the central dogma." ; dcterms:identifier "refseq" ; dcterms:isReferencedBy , ; dcterms:modified "2025-08-07T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:genecards.gene.annotations, kgr:ncbigene.gene2refseq, kgr:ncbigene.gene_refseq_uniprotkb_collab, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "RefSeq" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "genomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:repodb a schema1:DataSource ; rdfs:label "RepoDB" ; dcterms:created "2025-07-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "RepoDB is a standard dataset of drug repositioning successes and failures that can be used to fairly and reproducibly benchmark computational repositioning methods. The database contains approved drugs, their indications, and clinical trial outcomes." ; dcterms:identifier "repodb" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-08-07T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:repodb.full_dataset, kgr:repodb.web_interface ; schema1:identifier "repodb" ; schema1:name "RepoDB" ; skos:inScheme "biomedical", "clinical", "drug discovery", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:repohub a schema1:DataSource ; rdfs:label "Drug Repurposing Hub" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Drug Repurposing Hub is a curated and annotated collection of FDA-approved drugs, clinical trial drugs, and pre-clinical tool compounds from the Broad Institute. The collection contains over 7,500 unique compounds targeting over 2,400 protein targets, with annotations for 826 drug indications and extensive metadata including structures, mechanisms, and therapeutic areas." ; dcterms:identifier "repohub" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-27T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:bioteque.embeddings, kgr:repohub.about, kgr:repohub.case-studies, kgr:repohub.data-portal, kgr:repohub.drug-info, kgr:repohub.followup-compounds, kgr:repohub.intake-policy, kgr:repohub.portal, kgr:repohub.repo1-library, kgr:repohub.sample-info, kgr:repohub.screening-info, kgr:repohub.screening-library ; schema1:name "Drug Repurposing Hub" ; skos:inScheme "biomedical", "drug discovery", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:reprotox-kg a schema1:KnowledgeGraph ; rdfs:label "ReproTox-KG" ; dcterms:created "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ReproTox-KG is a specialized knowledge graph focused on reproductive toxicology, integrating chemical exposure data with reproductive health outcomes, developmental toxicity information, and mechanistic pathways to support risk assessment and regulatory decision-making for reproductive and developmental health." ; dcterms:identifier "reprotox-kg" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-09-23T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:reprotox-kg.api, kgr:reprotox-kg.dataset, kgr:reprotox-kg.graph, kgr:reprotox-kg.portal ; schema1:name "ReproTox-KG" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:resid a schema1:Ontology ; rdfs:label "Protein covalent bond" ; dcterms:description "For the description of covalent bonds in proteins." ; dcterms:identifier "resid" ; dcterms:license "Not specified" ; schema1:name "Protein covalent bond" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:retriever a schema1:Aggregator ; rdfs:label "BioPack Retriever" ; dcterms:created "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Retriever is an NCATS Translator component that serves as a TRAPI (Translator Reasoner API) access layer and intermediary between Knowledge Providers and the Shepherd ARA. Retriever deduplicates subquery operations, provides a cache layer, and centralizes normalization calls for improved efficiency in querying multiple knowledge graph backends. It aggregates TRAPI query responses from DogPark Knowledge Providers, using external database backends to serve integrated biomedical knowledge." ; dcterms:identifier "retriever" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:retriever.code, kgr:retriever.docs ; schema1:identifier "retriever" ; schema1:name "BioPack Retriever" ; doap:repository ; skos:altLabel "Retriever" ; skos:inScheme "biomedical", "translational" ; adms:status "Active" ; foaf:homepage . kgr:rex a schema1:Ontology ; rdfs:label "Physico-chemical process" ; dcterms:description "An ontology of physico-chemical processes, i.e. physico-chemical changes occurring in course of time." ; dcterms:identifier "rex" ; dcterms:license "Not specified" ; schema1:hasPart kgr:rex.owl ; schema1:name "Physico-chemical process" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Orphaned" ; foaf:homepage . kgr:rfam a schema1:DataSource ; rdfs:label "Rfam" ; dcterms:created "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Rfam is a comprehensive database of RNA families, each represented by multiple sequence alignments, consensus secondary structures and covariance models. The database provides curated information for over 4,000 non-coding RNA families and is widely used for RNA annotation, genome analysis, and as training data for machine learning models. Release 15.0 includes expanded coverage with 26,106 genomes, improved 3D structure integration, complete microRNA synchronization with miRBase, enhanced Gene Ontology annotations, and comprehensive viral RNA families." ; dcterms:identifier "rfam" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:rfam.api, kgr:rfam.cm-models, kgr:rfam.docs, kgr:rfam.fasta, kgr:rfam.ftp, kgr:rfam.full-alignments, kgr:rfam.pdb-mappings, kgr:rfam.portal, kgr:rfam.public-db, kgr:rfam.seed-alignments, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "Rfam" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:rgd a schema1:DataSource ; rdfs:label "Rat Genome Database" ; dcterms:created "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Rat Genome Database (RGD) curates and integrates rat genomic and phenotype data, and provides tools for genomics, physiology and functional genomics in rats. RGD contains comprehensive data on genes, QTLs, strains, and genomic elements for rat, human, mouse, chinchilla, dog, cat, pig, bonobo, squirrel, green monkey, and naked mole rat. The database includes extensive ontology annotations (RDO, CMO, ChEBI, EFO, GO, HP, MMO, MP, PW, RS, VT, XCO), variant information, pathway data, and disease relationships." ; dcterms:identifier "rgd" ; dcterms:modified "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:disgenet.data, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:identifier "rgd" ; schema1:name "Rat Genome Database" ; doap:repository ; skos:altLabel "RGD" ; skos:inScheme "biological systems", "genomics", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:rhea a schema1:DataSource ; rdfs:label "Rhea" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Rhea is an expert-curated knowledgebase of chemical and transport reactions of biological interest." ; dcterms:identifier "rhea" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:microbiomekg.api, kgr:obo-db-ingest.rhea.json, kgr:obo-db-ingest.rhea.obo, kgr:obo-db-ingest.rhea.owl, kgr:obo-db-ingest.rhea.sssom.tsv, kgr:swisslipid.enzymes ; schema1:identifier "rhea" ; schema1:name "Rhea" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:ribocentre a schema1:DataSource ; rdfs:label "Ribocentre" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Ribocentre is a comprehensive database containing information about natural ribozymes, including sequences, structures, catalytic mechanisms, and applications. It provides searchable and browsable access to ribozyme research data with interactive 2D and 3D visualizations." ; dcterms:identifier "ribocentre" ; dcterms:isReferencedBy , ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ribocentre.portal, kgr:ribocentre.publications, kgr:ribocentre.ribozymes, kgr:ribocentre.search, kgr:ribocentre.structures, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "Ribocentre" ; skos:altLabel "RiboCentre" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:ribovision a schema1:Resource ; rdfs:label "RiboVision" ; dcterms:created "2025-10-27T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "RiboVision is a comprehensive webserver suite for visualization and analysis of ribosomal RNA structures, designed to integrate phylogenetic, structural, and evolutionary information about ribosomes in multiple dimensions. It provides interactive tools for exploring ribosomal RNA sequences, secondary structures, 3D structures, and associated data." ; dcterms:identifier "ribovision" ; dcterms:isReferencedBy , ; dcterms:modified "2025-10-27T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ribovision.2d-maps, kgr:ribovision.2d-viewer, kgr:ribovision.3d-structures, kgr:ribovision.3d-viewer, kgr:ribovision.about, kgr:ribovision.advanced-features, kgr:ribovision.alignments, kgr:ribovision.basic-navigation, kgr:ribovision.chemical-modifications, kgr:ribovision.data-documentation, kgr:ribovision.examples, kgr:ribovision.expansion-segments, kgr:ribovision.helices, kgr:ribovision.msa-viewer, kgr:ribovision.nucleotide-frequencies, kgr:ribovision.phylogeny-browser, kgr:ribovision.portal, kgr:ribovision.protein-contacts, kgr:ribovision.sequences, kgr:ribovision.shannon-entropy, kgr:ribovision.twincons, kgr:ribovision.user-upload-guide, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "RiboVision" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:rna-kg a schema1:KnowledgeGraph ; rdfs:label "RNA-KG" ; dcterms:created "2025-08-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "An ontology-based KG for representing interactions involving RNA molecules." ; dcterms:identifier "rna-kg" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2025-08-25T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes ; schema1:name "RNA-KG" ; doap:repository ; skos:inScheme "biomedical", "drug discovery", "health" ; adms:status "Active" ; foaf:homepage . kgr:rnacentral a schema1:Aggregator ; rdfs:label "RNAcentral" ; dcterms:created "2025-07-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "RNAcentral is the international non-coding RNA (ncRNA) sequence database that aggregates and harmonizes ncRNA sequences and annotations from expert databases across all domains of life. It provides comprehensive search, browse, programmatic access, and bulk downloads for sequences, secondary structures, and cross-references." ; dcterms:identifier "rnacentral" ; dcterms:license ; dcterms:modified "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:mechreponet.kg, kgr:ribocentre.search, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:identifier "rnacentral" ; schema1:name "RNAcentral" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:rnao a schema1:Ontology ; rdfs:label "RNA ontology" ; dcterms:description "Controlled vocabulary pertaining to RNA function and based on RNA sequences, secondary and three-dimensional structures." ; dcterms:identifier "rnao" ; dcterms:license ; schema1:hasPart kgr:rnao.obo, kgr:rnao.owl ; schema1:name "RNA ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:ro a schema1:Ontology ; rdfs:label "Relation Ontology" ; dcterms:description "Relationship types shared across multiple ontologies" ; dcterms:identifier "ro" ; dcterms:license ; schema1:hasPart kgr:chr.model.owl, kgr:efo.obo, kgr:efo.owl, kgr:pheknowlator.graph, kgr:ro.core.owl, kgr:ro.json, kgr:ro.obo, kgr:ro.owl, kgr:ro.ro-base.owl, kgr:ro.subsets.ro-eco.owl, kgr:ro.subsets.ro-interaction.owl, kgr:ro.subsets.ro-neuro.owl ; schema1:name "Relation Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:robokop a schema1:KnowledgeGraph ; rdfs:label "ROBOKOP" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ROBOKOP (Reasoning Over Biomedical Objects linked in Knowledge Oriented Pathways) is an open-source biomedical knowledge graph system that enables complex queries over a large-scale integrated knowledge graph." ; dcterms:identifier "robokop" ; dcterms:license ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:automat.robokopkg, kgr:automat.robokopplus, kgr:robokop.graph ; schema1:identifier "robokop" ; schema1:name "ROBOKOP" ; doap:repository ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage . kgr:rs a schema1:Ontology ; rdfs:label "Rat Strain Ontology" ; dcterms:description "Ontology of rat strains" ; dcterms:identifier "rs" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:rs.obo, kgr:rs.owl ; schema1:name "Rat Strain Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:rtx-kg2 a schema1:KnowledgeGraph ; rdfs:label "RTX-KG2" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "RTX-KG2 is a comprehensive biomedical knowledge graph that integrates information from over 80 structured knowledge sources into a semantically standardized model, supporting translational biomedicine and the ARAX biomedical reasoning system." ; dcterms:identifier "rtx-kg2" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:rtx-kg2.code, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j ; schema1:identifier "rtx-kg2" ; schema1:name "RTX-KG2" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "genomics", "health", "pharmacology" ; adms:status "Active" ; foaf:homepage . kgr:ruralkg a schema1:KnowledgeGraph ; rdfs:label "Rural Resilience KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Rural Resilience KG is a cross-domain knowledge graph to integrate health and justice for rural resilience, connecting data about healthcare access, legal services, and community resources in rural areas." ; dcterms:identifier "ruralkg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:ruralkg.sparql ; schema1:name "Rural Resilience KG" ; skos:inScheme "health", "social determinants" ; adms:status "Active" ; foaf:homepage . kgr:rxno a schema1:Ontology ; rdfs:label "Name Reaction Ontology" ; dcterms:description "Connects organic name reactions to their roles in an organic synthesis and to processes in MOP" ; dcterms:identifier "rxno" ; dcterms:license ; schema1:hasPart kgr:rxno.owl ; schema1:name "Name Reaction Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:rxnorm a schema1:DataSource ; rdfs:label "RxNorm" ; dcterms:created "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "RxNorm is the National Library of Medicine's standardized nomenclature for clinical drugs, providing normalized names and unique concept identifiers (RxCUIs) for medications. Developed to support interoperability between healthcare systems, RxNorm links its standardized drug names to the vocabularies commonly used in pharmacy management and drug interaction software, including First Databank, Micromedex, Multum, and Gold Standard Drug Database. By providing links between these diverse vocabularies, RxNorm enables seamless communication between systems that do not use the same software or terminology. RxNorm organizes drug information into a hierarchy of term types representing different levels of specificity, from ingredients through clinical drug components to specific branded and generic products. The nomenclature covers prescription drugs, over-the-counter medications, and now includes the United States Pharmacopeia Compendial Nomenclature containing all Active Pharmaceutical Ingredients. RxNorm is updated monthly with new drug products, revisions to existing entries, and retirement of obsolete terms to maintain currency with the evolving pharmaceutical landscape. The system supports multiple use cases including electronic health records, e-prescribing, pharmacy management systems, drug interaction checking, clinical decision support, and public health surveillance." ; dcterms:identifier "rxnorm" ; dcterms:isReferencedBy ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:ndfrt.rxnorm, kgr:rxnorm.api, kgr:rxnorm.data_files, kgr:rxnorm.rxclass, kgr:rxnorm.rxmix, kgr:rxnorm.rxnav, kgr:rxnorm.rxnav_in_a_box ; schema1:identifier "rxnorm" ; schema1:name "RxNorm" ; skos:inScheme "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:sao a schema1:Ontology ; rdfs:label "Subcellular anatomy ontology" ; dcterms:description "Description unavailable." ; dcterms:identifier "sao" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Subcellular anatomy ontology" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:sawgraph a schema1:KnowledgeGraph ; rdfs:label "SAWGraph PFAS graph" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Safe Agricultural Products and Water Graph (SAWGraph) PFAS graph stores data on PFAS observations and releases, describing the samples, the geospatial features they were taken from, the sampled environmental media, the specific chemical substances and the measurement values observed." ; dcterms:identifier "sawgraph" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:sawgraph.sparql ; schema1:name "SAWGraph PFAS graph" ; doap:repository ; skos:inScheme "agriculture", "chemistry and biochemistry", "environment" ; adms:status "Active" ; foaf:homepage . kgr:sbo a schema1:Ontology ; rdfs:label "Systems Biology Ontology" ; dcterms:description "Terms commonly used in Systems Biology, and in particular in computational modeling." ; dcterms:identifier "sbo" ; dcterms:license ; schema1:hasPart kgr:sbo.owl, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "Systems Biology Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:scales a schema1:KnowledgeGraph ; rdfs:label "SCALES" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SCALES is an integrated justice platform to connect criminal justice data across data silos, enabling comprehensive analysis of court records, sentencing data, and legal outcomes." ; dcterms:identifier "scales" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:scales.sparql ; schema1:name "SCALES" ; skos:inScheme "social determinants" ; adms:status "Active" ; foaf:homepage . kgr:scdo a schema1:Ontology ; rdfs:label "Sickle Cell Disease Ontology" ; dcterms:description "An ontology for the standardization of terminology and integration of knowledge about Sickle Cell Disease." ; dcterms:identifier "scdo" ; dcterms:license ; schema1:hasPart kgr:scdo.obo, kgr:scdo.owl ; schema1:name "Sickle Cell Disease Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:scibite a schema1:Resource ; rdfs:label "SciBite" ; dcterms:created "2025-03-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Data produced by SciBite" ; dcterms:identifier "scibite" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:scibite.hgnc ; schema1:identifier "scibite" ; schema1:name "SciBite" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:sckan a schema1:DataSource ; rdfs:label "SCKAN" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SCKAN (SPARC Connectivity Knowledge base of the Autonomic Nervous system) is a curated knowledge base representing neural circuit connectivity in the autonomic nervous system, derived from SPARC data, anatomical expert interviews, and scientific literature. It supports reasoning and querying of central and peripheral nervous system-end organ circuitry, including detailed ApiNATOMY models for organs such as bladder, heart, colon, stomach, spleen, pancreas, and airways." ; dcterms:identifier "sckan" ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:sckan.apinatomy, kgr:sckan.data_release, kgr:sckan.docs, kgr:sckan.query_interface, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "SCKAN" ; skos:inScheme "anatomy and development", "biological systems" ; adms:status "Active" . kgr:securechainkg a schema1:KnowledgeGraph ; rdfs:label "SecureChain KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SecureChain is a knowledge graph for resilient, trustworthy, and secure software supply chains, providing structured data about software components, dependencies, vulnerabilities, and security practices." ; dcterms:identifier "securechainkg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:securechainkg.sparql ; schema1:name "SecureChain KG" ; skos:inScheme "information technology" ; adms:status "Active" ; foaf:homepage . kgr:semapv a schema1:Ontology ; rdfs:label "Semantic Mapping Vocabulary" ; dcterms:created "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Semantic Mapping Vocabulary (SEMAPV) is a vocabulary for describing the processes, entities, and agents involved in the curation of semantic mappings between ontologies and terminologies. SEMAPV is developed in conjunction with the Simple Standard for Sharing Ontology Mappings (SSSOM), providing detailed vocabulary to describe different kinds of matching processes (lexical, logical, etc.) as well as pre- and post-processing techniques employed in mapping workflows." ; dcterms:identifier "semapv" ; dcterms:modified "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:efo.obo, kgr:efo.owl ; schema1:name "Semantic Mapping Vocabulary" ; doap:repository ; skos:altLabel "SEMAPV" ; skos:inScheme "general" ; adms:status "Active" ; foaf:homepage . kgr:semmeddb a schema1:DataSource ; rdfs:label "Semantic MEDLINE Database (SemMedDB)" ; dcterms:created "2025-05-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SemMedDB is a repository of semantic predications (subject-predicate-object triples) extracted from biomedical literature by SemRep, a natural language processing system. It contains over 130 million semantic predications extracted from more than 37 million PubMed citations, supporting biomedical knowledge discovery, literature-based discovery, and clinical applications." ; dcterms:identifier "semmeddb" ; dcterms:isReferencedBy , , , ; dcterms:license ; dcterms:modified "2026-01-23T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:epigraphdb.graph, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:semmeddb.semrep.tool, kgr:translator.semmeddb.graph ; schema1:identifier "semmeddb" ; schema1:name "Semantic MEDLINE Database (SemMedDB)" ; skos:inScheme "biomedical", "clinical", "drug discovery", "genomics", "health", "literature", "pharmacology" ; adms:status "Inactive" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:semopenalex a schema1:KnowledgeGraph ; rdfs:label "SemOpenAlex" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SemOpenAlex provides comprehensive information on scientific publications and related entities, offering a semantic layer over the OpenAlex scholarly database with linked data about papers, authors, institutions, and citations." ; dcterms:identifier "semopenalex" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:semopenalex.sparql ; schema1:name "SemOpenAlex" ; skos:inScheme "literature" ; adms:status "Active" ; foaf:homepage . kgr:sennet a schema1:DataSource ; rdfs:label "SenNet" ; dcterms:created "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Cellular Senescence Network (SenNet) is an NIH Common Fund program that aims to comprehensively identify and characterize senescent cells across the human lifespan and in various disease states. SenNet provides spatial molecular maps of senescent cells in tissues, developing and applying cutting-edge technologies for detecting cellular senescence. The consortium generates multi-omics data, imaging data, and develops computational tools to advance understanding of how senescent cells contribute to aging and age-related diseases." ; dcterms:identifier "sennet" ; dcterms:modified "2025-11-05T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:sennet.api, kgr:sennet.data, kgr:sennet.portal, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "SenNet" ; skos:altLabel "Cellular Senescence Network", "SenNet" ; skos:inScheme "anatomy and development", "biomedical", "genomics", "health", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:sep a schema1:Ontology ; rdfs:label "Sample processing and separation techniques" ; dcterms:description "A structured controlled vocabulary for the annotation of sample processing and separation techniques in scientific experiments." ; dcterms:identifier "sep" ; dcterms:license "Not specified" ; schema1:hasPart kgr:sep.owl ; schema1:name "Sample processing and separation techniques" ; skos:inScheme "biomedical" ; adms:status "Inactive" ; foaf:homepage . kgr:sepio a schema1:Ontology ; rdfs:label "Scientific Evidence and Provenance Information Ontology" ; dcterms:description "An ontology for representing the provenance of scientific claims and the evidence that supports them." ; dcterms:identifier "sepio" ; dcterms:license ; schema1:hasPart kgr:sepio.owl ; schema1:name "Scientific Evidence and Provenance Information Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:service-kp a schema1:KnowledgeGraph ; rdfs:label "Service KP" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A Translator Knowledge Provider" ; dcterms:identifier "service-kp" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:service-kp.code, kgr:service-kp.docs, kgr:service-kp.portal ; schema1:name "Service KP" ; skos:inScheme "health" ; adms:status "Active" . kgr:sgd a schema1:DataSource ; rdfs:label "Saccharomyces Genome Database" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Saccharomyces Genome Database (SGD) project collects information and maintains a database of the molecular biology of the yeast Saccharomyces cerevisiae." ; dcterms:identifier "sgd" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:genecards.model.organisms, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:identifier "sgd" ; schema1:name "Saccharomyces Genome Database" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:sibils a schema1:DataSource ; rdfs:label "SIBiLS" ; dcterms:created "2025-05-07T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SIBiLS (Swiss Institute of Bioinformatics Literature Services) provides personalized information retrieval in biological literature, with customizable search in semantically enriched contents based on keywords and mapped biomedical entities from standardized vocabularies." ; dcterms:identifier "sibils" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-12-07T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:sibils.api.rest.fetch, kgr:sibils.api.rest.qa, kgr:sibils.api.rest.search, kgr:sibils.api.sparql, kgr:sibils.site ; schema1:name "SIBiLS" ; skos:inScheme "biological systems", "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:sib . kgr:sibo a schema1:Ontology ; rdfs:label "Social Insect Behavior Ontology" ; dcterms:description "Social Behavior in insects" ; dcterms:identifier "sibo" ; dcterms:license ; schema1:hasPart kgr:sibo.obo, kgr:sibo.owl ; schema1:name "Social Insect Behavior Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Orphaned" ; foaf:homepage . kgr:sider a schema1:DataSource ; rdfs:label "SIDER" ; dcterms:created "2025-05-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SIDER (Side Effect Resource) contains information on marketed medicines and their recorded adverse drug reactions. The information is extracted from public documents and package inserts, including side effect frequency, drug and side effect classifications, and links to further information." ; dcterms:identifier "sider" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:bioteque.embeddings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:ibkh.graph, kgr:indra.cogex.code, kgr:pharmkg.graph, kgr:sider.drug_atc, kgr:sider.drug_names, kgr:sider.meddra, kgr:sider.meddra_all_indications, kgr:sider.meddra_all_label_indications, kgr:sider.meddra_all_label_se, kgr:sider.meddra_all_se, kgr:sider.meddra_freq, kgr:sider.web, kgr:spoke.graph, kgr:translator.sider.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "sider" ; schema1:name "SIDER" ; skos:inScheme "biomedical", "drug discovery", "health", "pharmacology" ; adms:status "Inactive" ; foaf:homepage . kgr:signor a schema1:DataSource ; rdfs:label "SIGNOR" ; dcterms:created "2025-08-12T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SIGNOR (SIGnaling Network Open Resource) is a manually curated repository of experimentally supported, causal relationships between human proteins and other biologically relevant entities (chemicals, phenotypes, complexes, families, stimuli). Each interaction is annotated with effect, mechanism, directionality, evidence (PMID), and a relevance score, enabling construction and analysis of signed, directed signaling networks and pathways. Cite SIGNOR (Lo Surdo et al., 2022 NAR) when using data; interaction data are directional and signed—verify effect/mechanism fields when integrating." ; dcterms:identifier "signor" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-08-23T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:signor.api, kgr:signor.complete, kgr:signor.interactions.dynamic, kgr:signor.pathways, kgr:signor.web, kgr:translator.signor.graph ; schema1:identifier "signor" ; schema1:name "SIGNOR" ; skos:inScheme "biomedical", "pathways", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:silva a schema1:DataSource ; rdfs:label "SILVA" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SILVA is a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data. It provides regularly updated datasets of aligned small (16S/18S, SSU) and large subunit (23S/28S, LSU) ribosomal RNA sequences for all three domains of life (Bacteria, Archaea and Eukarya). SILVA is a Global Core Biodata Resource and ELIXIR Core Data Resource, currently maintaining over 9.4 million SSU sequences in release 138.2." ; dcterms:identifier "silva" ; dcterms:isReferencedBy , ; dcterms:modified "2025-09-24T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:silva.aligner, kgr:silva.arb_files, kgr:silva.browser, kgr:silva.ngs_pipeline, kgr:silva.release_files, kgr:silva.search, kgr:silva.testprime, kgr:silva.testprobe ; schema1:name "SILVA" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "genomics", "microbiology", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:skm a schema1:KnowledgeGraph ; rdfs:label "Stress Knowledge Map" ; dcterms:created "2025-06-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A comprehensive knowledge graph resource for systems biology analysis of plant stress responses, containing mechanistic models and knowledge networks for plant stress signaling. It includes two knowledge graphs, the mechanistic Plant Stress Signalling model (PSS) and the Comprehensive Knowledge Network (CKN)." ; dcterms:hasVersion "1.0" ; dcterms:identifier "skm" ; dcterms:isReferencedBy ; dcterms:language "en" ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:skm.ckn.explorer, kgr:skm.ckn.v1.annotations, kgr:skm.ckn.v1.graph, kgr:skm.ckn.v2.annotations, kgr:skm.ckn.v2.graph, kgr:skm.pss.explorer, kgr:skm.pss.live.boolnet.annotations, kgr:skm.pss.live.boolnet.graph, kgr:skm.pss.live.dot, kgr:skm.pss.live.sbgn, kgr:skm.pss.live.sbml, kgr:skm.pss.live.sif.dinar.graph, kgr:skm.pss.live.sif.original.annotations, kgr:skm.pss.live.sif.original.graph, kgr:skm.pss.live.sif.projection.annotations, kgr:skm.pss.live.sif.projection.graph ; schema1:name "Stress Knowledge Map" ; doap:repository ; skos:inScheme "organisms", "pathways", "plant science", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:skos a schema1:DataModel ; rdfs:label "SKOS" ; dcterms:created "2025-06-25T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SKOS (Simple Knowledge Organization System) is a W3C recommendation designed for representation of thesauri, classification schemes, taxonomies, subject-heading systems, or any other type of structured controlled vocabulary." ; dcterms:hasVersion "SKOS Reference (August 18, 2009)" ; dcterms:identifier "skos" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:chr.model.owl, kgr:clo.owl, kgr:edam.csv, kgr:edam.owl, kgr:edam.tsv, kgr:efo.obo, kgr:efo.owl, kgr:forum.graph.dump, kgr:openbiodiv.ontology.ttl, kgr:skos.core, kgr:skos.rdf, kgr:skos.reference ; schema1:name "SKOS" ; doap:repository ; skos:inScheme "upper" ; adms:status "Active" ; foaf:homepage . kgr:sldb a schema1:KnowledgeGraph ; rdfs:label "sldb" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A graph of synthetic lethal interactions." ; dcterms:identifier "sldb" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:sldb.code, kgr:sldb.docs, kgr:sldb.releases ; schema1:name "sldb" ; doap:repository ; skos:inScheme "organisms" ; adms:status "Active" ; foaf:homepage . kgr:slso a schema1:Ontology ; rdfs:label "Space Life Sciences Ontology" ; dcterms:description "The Space Life Sciences Ontology is an application ontology and is intended to support the operation of NASA's Life Sciences Data Archive and other systems that contain space life science research data." ; dcterms:identifier "slso" ; dcterms:license ; schema1:hasPart kgr:slso-base.owl, kgr:slso.json, kgr:slso.obo, kgr:slso.owl ; schema1:name "Space Life Sciences Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:smart a schema1:DataSource ; rdfs:label "SMART" ; dcterms:created "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A protein domain annotation and architecture analysis resource covering curated domain models and annotated proteomes." ; dcterms:identifier "smart" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:smart.list-genomes, kgr:smart.portal, kgr:smart.search, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full ; schema1:name "SMART" ; skos:altLabel "SMART", "Simple Modular Architecture Research Tool" ; skos:inScheme "biological systems", "genomics", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:smpdb a schema1:DataSource ; rdfs:label "Small Molecule Pathway Database" ; dcterms:created "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Small Molecule Pathway Database (SMPDB) is an interactive, visual database containing more than 30,000 small molecule pathways found in humans. SMPDB provides detailed pathway diagrams for metabolic pathways, metabolic disease pathways, metabolite signaling pathways, and drug-action pathways. All pathways include information on relevant organs, subcellular compartments, cofactors, protein locations, metabolite locations, chemical structures, and protein quaternary structures. Each small molecule is hyperlinked to HMDB or DrugBank and each protein is hyperlinked to UniProt." ; dcterms:identifier "smpdb" ; dcterms:isReferencedBy , ; dcterms:modified "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "smpdb" ; schema1:name "Small Molecule Pathway Database" ; skos:altLabel "SMPDB" ; skos:inScheme "biological systems", "chemistry and biochemistry", "drug discovery", "pathways" ; adms:status "Active" ; foaf:homepage . kgr:snodb a schema1:DataSource ; rdfs:label "snoDB" ; dcterms:created "2025-10-27T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "snoDB is a specialized database of human small nucleolar RNAs (snoRNAs), integrating data from established databases with manually curated literature. It provides comprehensive information on snoRNA genomic locations, sequences, conservation, host genes, snoRNA-RNA interactions, snoRNA-protein interactions, and abundance data across tissues and cancer cells." ; dcterms:identifier "snodb" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-27T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:snodb.about, kgr:snodb.abundance, kgr:snodb.abundance-viewer, kgr:snodb.canonical-interactions, kgr:snodb.conservation, kgr:snodb.copies, kgr:snodb.experiment-details, kgr:snodb.export, kgr:snodb.host-genes, kgr:snodb.motifs, kgr:snodb.noncanonical-interactions, kgr:snodb.portal, kgr:snodb.protein-interactions, kgr:snodb.rrna-modifications, kgr:snodb.rrna-mods, kgr:snodb.sequence-search, kgr:snodb.sequences, kgr:snodb.snorupdate, kgr:snodb.statistics, kgr:snodb.tutorial ; schema1:name "snoDB" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:snomedct a schema1:Ontology ; rdfs:label "SNOMED CT" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SNOMED CT (Systematized Nomenclature of Medicine Clinical Terms) is the most comprehensive, multilingual clinical healthcare terminology in the world. It provides a standardized way to represent clinical phrases captured by clinicians and enables automatic interpretation of these terms. SNOMED CT includes more than 360,000 active concepts with unique meanings and formal logic-based definitions organized into hierarchies." ; dcterms:identifier "snomedct" ; dcterms:license ; dcterms:modified "2026-02-18T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:athena.mappings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:snomedct.browser, kgr:snomedct.icd10cm.map, kgr:snomedct.international.content, kgr:snomedct.nursing, kgr:snomedct.us.content, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:identifier "snomedct" ; schema1:name "SNOMED CT" ; doap:repository ; skos:inScheme "biomedical", "clinical", "health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:snopy a schema1:DataSource ; rdfs:label "snOPY" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "snOPY (snoRNA Orthological Gene Database) provides comprehensive information about small nucleolar RNAs (snoRNAs), their gene loci, and target RNAs across multiple species. The database focuses on orthologous relationships between snoRNAs using target RNA conservation rather than snoRNA sequence similarity." ; dcterms:identifier "snopy" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-27T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:snopy.about, kgr:snopy.blast, kgr:snopy.box-cd-snornas, kgr:snopy.box-haca-snornas, kgr:snopy.intronic-loci, kgr:snopy.monocistronic-loci, kgr:snopy.ortholog-data, kgr:snopy.orthologs, kgr:snopy.polycistronic-loci, kgr:snopy.portal, kgr:snopy.rrna-modifications, kgr:snopy.search, kgr:snopy.snrna-modifications, kgr:snopy.statistics, kgr:snopy.target-rna ; schema1:name "snOPY" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:snornadatabase a schema1:DataSource ; rdfs:label "snoRNABase" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "snoRNABase (also known as snoRNA-LBME-db) is a comprehensive database of human C/D box and H/ACA box small nucleolar RNAs (snoRNAs) and small Cajal body-specific RNAs (scaRNAs). The database contains 361 entries including 257 C/D box snoRNAs, 86 H/ACA snoRNAs, and 18 scaRNAs. It provides detailed information on snoRNA sequences, their genomic locations, host genes, target RNAs (rRNAs and spliceosomal RNAs), predicted base-pairing interactions with target nucleotides, and modification sites (2'-O-ribose methylation and pseudouridylation). Each entry includes literature references, GenBank accession numbers, and links to the UCSC Genome Browser. The database features search, browse, and \"Find guide RNA\" functions to identify snoRNAs that guide modifications of specific nucleotides in rRNAs (28S, 18S, 5.8S) and spliceosomal RNAs (U1, U2, U4, U5, U6, U12)." ; dcterms:identifier "snornadatabase" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:snornadatabase.blast, kgr:snornadatabase.browse, kgr:snornadatabase.find_guide, kgr:snornadatabase.portal, kgr:snornadatabase.search ; schema1:name "snoRNABase" ; skos:altLabel "snoRNA database", "snoRNA-LBME-db" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage . kgr:snpeff a schema1:Resource ; rdfs:label "SnpEff" ; dcterms:created "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SnpEff is a genetic variant annotation and functional effect prediction toolbox widely used in genomics pipelines. It annotates and predicts the effects of genetic variants on genes and proteins (such as amino acid changes), supports over 38,000 genomes, uses standardized Sequence Ontology terms, and implements the VCF annotation standard ANN field. SnpEff is bundled with SnpSift, a companion tool for filtering and manipulating genomic annotated variants. Both tools are integrated with Galaxy and GATK, making them essential components of sequencing data analysis workflows." ; dcterms:identifier "snpeff" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:snpeff.databases, kgr:snpeff.documentation, kgr:snpeff.download, kgr:snpeff.github, kgr:snpeff.sourceforge, kgr:snpsift.documentation ; schema1:identifier "snpeff" ; schema1:name "SnpEff" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "genomics", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:so a schema1:Ontology ; rdfs:label "Sequence types and features ontology" ; dcterms:description "A structured controlled vocabulary for sequence annotation, for the exchange of annotation data and for the description of sequence objects in databases." ; dcterms:identifier "so" ; dcterms:license ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:pheknowlator.graph, kgr:so.obo, kgr:so.owl, kgr:so.subsets.SOFA.obo, kgr:so.subsets.SOFA.owl ; schema1:name "Sequence types and features ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:sockg a schema1:KnowledgeGraph ; rdfs:label "SOC-KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Soil Organic Carbon Knowledge Graph (SOCKG) enhances robust soil carbon modeling, which is crucial for voluntary carbon markets. It provides structured data about soil carbon measurements, agricultural practices, and environmental factors." ; dcterms:identifier "sockg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:sockg.sparql ; schema1:name "SOC-KG" ; skos:inScheme "agriculture", "environment" ; adms:status "Active" ; foaf:homepage . kgr:sopharm a schema1:Ontology ; rdfs:label "Suggested Ontology for Pharmacogenomics" ; dcterms:description "Description unavailable." ; dcterms:identifier "sopharm" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Suggested Ontology for Pharmacogenomics" ; skos:inScheme "chemistry and biochemistry" ; adms:status "Inactive" ; foaf:homepage . kgr:spatialkg a schema1:KnowledgeGraph ; rdfs:label "SAWGraph Spatial KG" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The SAWGraph Spatial KG is part of the Safe Agricultural Products and Water Graph (SAWGraph) project. It contains all the Level 13 grid cells from the S2 grid as well as administrative regions of levels 1 to 3 (states, counties, and county subdivisions) and the spatial relationships between them for the 48 contiguous states in the U.S." ; dcterms:identifier "spatialkg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:spatialkg.sparql ; schema1:name "SAWGraph Spatial KG" ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:spd a schema1:Ontology ; rdfs:label "Spider Ontology" ; dcterms:description "An ontology for spider comparative biology including anatomical parts (e.g. leg, claw), behavior (e.g. courtship, combing) and products (i.g. silk, web, borrow)." ; dcterms:identifier "spd" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:spd.owl ; schema1:name "Spider Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:spoke a schema1:KnowledgeGraph ; rdfs:label "SPOKE" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Scalable Precision Medicine Open Knowledge Engine (SPOKE) is a comprehensive biomedical knowledge graph that connects diverse data from multiple domains to enable discovery and precision medicine applications." ; dcterms:hasVersion "2.0" ; dcterms:identifier "spoke" ; dcterms:isReferencedBy , , ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:spoke.graph, kgr:spoke.neighborhood_explorer, kgr:spoke.sparql ; schema1:identifier "spoke" ; schema1:name "SPOKE" ; doap:repository ; skos:inScheme "biomedical", "clinical", "drug discovery", "genomics", "health", "pharmacology", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:spoke-genelab a schema1:KnowledgeGraph ; rdfs:label "SPOKE GeneLab" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The spoke-genelab KG complements the SPOKE Open Knowledge Network KG and is designed to integrate omics data from NASA's Open Science Data Repository (OSDR/GeneLab), which hosts results from spaceflight experiments." ; dcterms:identifier "spoke-genelab" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:spoke-genelab.sparql ; schema1:name "SPOKE GeneLab" ; doap:repository ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:sri-reference-kg a schema1:KnowledgeGraph ; rdfs:label "SRI-Reference KG" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Monarch Initiative’s SRI reference knowledge graph." ; dcterms:identifier "sri-reference-kg" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:sri-reference-kg.graph ; schema1:identifier "sri-reference-kg" ; schema1:name "SRI-Reference KG" ; skos:inScheme "health" ; adms:status "Active" . kgr:srpdb a schema1:DataSource ; rdfs:label "SRPDB" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SRPDB (Signal Recognition Particle Database) provides aligned, annotated, and phylogenetically ordered sequences related to the structure and function of signal recognition particles (SRP). The database contains over 1,100 SRP RNA sequences and protein sequences from various organisms, with secondary structure diagrams based on comparative sequence analysis." ; dcterms:identifier "srpdb" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-27T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:srpdb.2d-structures, kgr:srpdb.3d-structures, kgr:srpdb.about, kgr:srpdb.animal-rna, kgr:srpdb.archaeal-rna, kgr:srpdb.bibliography, kgr:srpdb.cam-kinase, kgr:srpdb.comparative-analysis, kgr:srpdb.cpsrp43, kgr:srpdb.flhf, kgr:srpdb.ftsy, kgr:srpdb.fungal-metazoan-rna, kgr:srpdb.links, kgr:srpdb.long-bacterial-rna, kgr:srpdb.models, kgr:srpdb.more-protein-browser, kgr:srpdb.motifs, kgr:srpdb.overview, kgr:srpdb.plant-rna, kgr:srpdb.portal, kgr:srpdb.protozoan-rna, kgr:srpdb.receptor-beta, kgr:srpdb.short-bacterial-rna, kgr:srpdb.srp-protein-browser, kgr:srpdb.srp-rna-browser, kgr:srpdb.srp14, kgr:srpdb.srp19, kgr:srpdb.srp21, kgr:srpdb.srp54, kgr:srpdb.srp68, kgr:srpdb.srp72, kgr:srpdb.srp9, kgr:srpdb.structures ; schema1:name "SRPDB" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:stato a schema1:Ontology ; rdfs:label "The Statistical Methods Ontology" ; dcterms:description "STATO is a general-purpose STATistics Ontology. Its aim is to provide coverage for processes such as statistical tests, their conditions of application, and information needed or resulting from statistical methods, such as probability distributions, variables, spread and variation metrics. STATO also covers aspects of experimental design and description of plots and graphical representations commonly used to provide visual cues of data distribution or layout and to assist review of the results." ; dcterms:identifier "stato" ; dcterms:license ; schema1:hasPart kgr:stato.owl ; schema1:name "The Statistical Methods Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:stellar a schema1:Resource ; rdfs:label "STELLAR" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "STELLAR is a geometric deep learning method for cell type discovery and identification in spatially resolved single-cell datasets. It automatically assigns cells to known cell types and discovers novel cell types by transferring annotations across different dissection regions, tissues, and donors." ; dcterms:identifier "stellar" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:stellar.code, kgr:stellar.datasets, kgr:stellar.demo, kgr:ubkg.csv, kgr:ubkg.neo4j ; schema1:name "STELLAR" ; doap:repository ; skos:inScheme "biomedical", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:stitch a schema1:DataSource ; rdfs:label "STITCH" ; dcterms:created "2025-11-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "STITCH (Search Tool for Interactions of Chemicals) is a database of known and predicted interactions between chemicals and proteins across 2,031 organisms. The resource integrates chemical-protein interactions from five main sources - genomic context predictions, high-throughput experimental data, conserved co-expression patterns, automated text mining, and curated knowledge from databases. STITCH covers 9.6 million proteins and 500,000 chemicals with 1.6 billion interactions, combining direct physical and indirect functional associations. Version 5 was released in 2016 and is no longer actively maintained (marked as unsupported)." ; dcterms:identifier "stitch" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:stitch.api, kgr:stitch.downloads, kgr:stitch.portal, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "stitch" ; schema1:name "STITCH" ; skos:inScheme "biomedical", "drug discovery", "systems biology" ; adms:status "Inactive" ; foaf:homepage ; foaf:maker kgr:stringdb . kgr:string a schema1:DataSource ; rdfs:label "STRING" ; dcterms:created "2025-06-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "STRING is a database of known and predicted protein-protein interactions. The interactions include direct (physical) and indirect (functional) associations derived from computational prediction, knowledge transfer between organisms, and interactions aggregated from other primary databases." ; dcterms:hasVersion "12.0" ; dcterms:identifier "string" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:aop-db.data, kgr:automat.stringdb, kgr:bioteque.embeddings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:epigraphdb.graph, kgr:genecards.protein.interactions, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:pheknowlator.graph, kgr:spoke.graph, kgr:string.api, kgr:string.clusters.info, kgr:string.clusters.proteins, kgr:string.clusters.tree, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.cog.mappings, kgr:string.database, kgr:string.database.evidence, kgr:string.database.items, kgr:string.database.schema, kgr:string.protein.aliases, kgr:string.protein.enrichment.terms, kgr:string.protein.homology, kgr:string.protein.info, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.network.embeddings, kgr:string.protein.orthology, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:string.protein.sequence.embeddings, kgr:string.protein.sequences, kgr:string.species, kgr:string.species.tree, kgr:string.web, kgr:ubkg.csv, kgr:ubkg.neo4j, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "string" ; schema1:name "STRING" ; skos:inScheme "biomedical", "genomics", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:sudokn a schema1:KnowledgeGraph ; rdfs:label "SUDOKN" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SUDOKN (Supply and Demand Open Knowledge Network) is an interconnected network of publicly available manufacturing capability data focused on Small and Medium-Sized Manufacturers (SMMs)." ; dcterms:identifier "sudokn" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:sudokn.sparql ; schema1:name "SUDOKN" ; skos:inScheme "other" ; adms:status "Active" ; foaf:homepage . kgr:suppkg a schema1:KnowledgeGraph ; rdfs:label "SuppKG" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SuppKG is a knowledge graph that integrates information about dietary supplements and their relationships with diseases, genes, proteins, and other biomedical entities, developed to support translational research and clinical decision-making." ; dcterms:identifier "suppkg" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:suppkg.docs, kgr:suppkg.source-data ; schema1:identifier "suppkg" ; schema1:name "SuppKG" ; skos:altLabel "Dietary Supplement Knowledge Graph", "SuppKG" ; skos:inScheme "biomedical", "health", "nutrition" ; adms:status "Active" ; foaf:homepage . kgr:swisslipid a schema1:DataSource ; rdfs:label "swisslipid" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "SwissLipids is a knowledge resource for lipids and their biology." ; dcterms:identifier "swisslipid" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:swisslipid.api, kgr:swisslipid.enzymes, kgr:swisslipid.evidences, kgr:swisslipid.go, kgr:swisslipid.lipids, kgr:swisslipid.lipids2uniprot, kgr:swisslipid.portal, kgr:swisslipid.tissues ; schema1:name "swisslipid" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:swissmodel a schema1:DataSource ; rdfs:label "SWISS-MODEL" ; dcterms:created "2026-01-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A protein structure homology-modeling resource providing automated model generation workflows and a repository of precomputed structural models." ; dcterms:identifier "swissmodel" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:swissmodel.api, kgr:swissmodel.portal, kgr:swissmodel.repository ; schema1:name "SWISS-MODEL" ; skos:altLabel "SWISS-MODEL", "SWISSMODEL" ; skos:inScheme "biological systems", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:swo a schema1:Ontology ; rdfs:label "Software ontology" ; dcterms:description "The Software Ontology (SWO) is a resource for describing software tools, their types, tasks, versions, provenance and associated data. It contains detailed information on licensing and formats as well as software applications themselves, mainly (but not limited) to the bioinformatics community." ; dcterms:identifier "swo" ; dcterms:license ; schema1:hasPart kgr:swo.json, kgr:swo.owl ; schema1:name "Software ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:symp a schema1:Ontology ; rdfs:label "Symptom Ontology" ; dcterms:description "An ontology of disease symptoms, with symptoms encompasing perceived changes in function, sensations or appearance reported by a patient indicative of a disease." ; dcterms:identifier "symp" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:symp.obo, kgr:symp.owl ; schema1:name "Symptom Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:t4fs a schema1:Ontology ; rdfs:label "terms4FAIRskills" ; dcterms:description "A terminology for the skills necessary to make data FAIR and to keep it FAIR." ; dcterms:identifier "t4fs" ; dcterms:license ; schema1:hasPart kgr:t4fs-community.json, kgr:t4fs-community.obo, kgr:t4fs-community.owl, kgr:t4fs.json, kgr:t4fs.obo, kgr:t4fs.owl ; schema1:name "terms4FAIRskills" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:tads a schema1:Ontology ; rdfs:label "Tick Anatomy Ontology" ; dcterms:description "The anatomy of the Tick, Families: Ixodidae, Argassidae" ; dcterms:identifier "tads" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:tads.obo, kgr:tads.owl ; schema1:name "Tick Anatomy Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:tahe a schema1:Ontology ; rdfs:label "Terminology of Anatomy of Human Embryology" ; dcterms:description "Description unavailable." ; dcterms:identifier "tahe" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Terminology of Anatomy of Human Embryology" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" . kgr:tahh a schema1:Ontology ; rdfs:label "Terminology of Anatomy of Human Histology" ; dcterms:description "Description unavailable." ; dcterms:identifier "tahh" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Terminology of Anatomy of Human Histology" ; skos:inScheme "biomedical" ; adms:status "Inactive" . kgr:tair a schema1:DataSource ; rdfs:label "The Arabidopsis Information Resource" ; dcterms:created "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Arabidopsis Information Resource (TAIR) maintains a comprehensive database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. TAIR provides the complete genome sequence, gene structure and product information, gene expression data, DNA and seed stocks, genome maps, genetic and physical markers, publications, and community information. Gene product function data is updated weekly from published research and community submissions." ; dcterms:identifier "tair" ; dcterms:modified "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db ; schema1:name "The Arabidopsis Information Resource" ; skos:altLabel "TAIR" ; skos:inScheme "biological systems", "genomics", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:tao a schema1:Ontology ; rdfs:label "Teleost Anatomy Ontology" ; dcterms:description "Multispecies fish anatomy ontology. Originally seeded from ZFA, but intended to cover terms relevant to other taxa" ; dcterms:identifier "tao" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:tao.owl ; schema1:name "Teleost Anatomy Ontology" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:tarbase a schema1:DataSource ; rdfs:label "TarBase" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "TarBase v9.0 is a comprehensive database of experimentally supported miRNA targets on protein-coding transcripts. It contains interactions identified via high-throughput methods (HITS-CLIP, PAR-CLIP, CLASH) and low-throughput experimental validation, all uniformly analyzed and manually curated with rich metadata." ; dcterms:identifier "tarbase" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-27T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:tarbase.downloads-doc, kgr:tarbase.help, kgr:tarbase.homo-sapiens, kgr:tarbase.interactions, kgr:tarbase.mus-musculus, kgr:tarbase.other-species, kgr:tarbase.portal, kgr:tarbase.statistics, kgr:tarbase.textmining, kgr:tarbase.viral, kgr:tarbase.visualizations ; schema1:name "TarBase" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:taxrank a schema1:Ontology ; rdfs:label "Taxonomic rank vocabulary" ; dcterms:description "A vocabulary of taxonomic ranks (species, family, phylum, etc)" ; dcterms:identifier "taxrank" ; dcterms:license ; schema1:hasPart kgr:taxrank.obo, kgr:taxrank.owl ; schema1:name "Taxonomic rank vocabulary" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:tcdb a schema1:DataSource ; rdfs:label "Transporter Classification Database (TCDB)" ; dcterms:created "2026-01-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "A curated classification database of membrane transport proteins, organized by the Transporter Classification (TC) system and supporting sequence- and family-level exploration." ; dcterms:identifier "tcdb" ; dcterms:modified "2026-02-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:tcdb.blast, kgr:tcdb.download.acc2tcid, kgr:tcdb.download.families, kgr:tcdb.download.fasta, kgr:tcdb.download.go, kgr:tcdb.download.pdb, kgr:tcdb.download.pfam, kgr:tcdb.download.refseq, kgr:tcdb.download.substrates, kgr:tcdb.download.superfamilies, kgr:tcdb.download.tcdoms, kgr:tcdb.portal, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:name "Transporter Classification Database (TCDB)" ; skos:altLabel "TCDB", "Transporter Classification Database" ; skos:inScheme "biological systems", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:tcga a schema1:DataSource ; rdfs:label "The Cancer Genome Atlas" ; dcterms:created "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Cancer Genome Atlas (TCGA) is a landmark cancer genomics program that molecularly characterized over 20,000 primary cancer and matched normal samples spanning 33 cancer types. This joint effort between NCI and the National Human Genome Research Institute began in 2006, bringing together researchers from diverse disciplines and multiple institutions. TCGA generated over 2.5 petabytes of genomic, epigenomic, transcriptomic, and proteomic data. The data, which has led to improvements in the ability to diagnose, treat, and prevent cancer, remains publicly available through the Genomic Data Commons for anyone in the research community to use." ; dcterms:identifier "tcga" ; dcterms:modified "2025-11-08T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:tcga.gdc_api, kgr:tcga.gdc_portal, kgr:tcga.gdc_submission ; schema1:identifier "tcga" ; schema1:name "The Cancer Genome Atlas" ; skos:altLabel "TCGA" ; skos:inScheme "genomics" ; adms:status "Active" ; foaf:homepage . kgr:tcrd a schema1:DataSource ; rdfs:label "Target Central Resource Database" ; dcterms:created "2025-01-10T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Target Central Resource Database (TCRD) is a comprehensive multi-omics knowledge base developed by the NIH Common Fund Illuminating the Druggable Genome (IDG) program to catalog and illuminate the human proteome, with special focus on understudied proteins in four major druggable protein families G-protein coupled receptors (GPCRs), nuclear receptors, ion channels, and protein kinases. TCRD aggregates data from over 80 diverse sources including protein-protein interactions, disease associations, drug-target relationships, gene expression profiles, tissue specificity, pathway memberships, phenotype associations, and pharmacological data to create a unified resource for target prioritization and drug discovery research. The database employs a protein Target Development Level (TDL) classification system (Tclin, Tchem, Tbio, Tdark) that ranks proteins based on the amount of available knowledge, specifically highlighting understudied dark proteins that lack adequate characterization. TCRD contains extensive information on protein sequences, structures, functions, disease relationships, and chemical interactions, integrating data from resources such as UniProt, ChEMBL, DrugCentral, STRING, GTEx, OMIM, and many others. The database is designed to be machine-learning ready with structured data formats suitable for computational analysis and target prediction algorithms. TCRD serves as the backend data infrastructure for Pharos, the user-friendly web interface that enables researchers to browse, visualize, and analyze the integrated target data through interactive tools and visualizations. The resource is continuously updated with new data sources and releases, with current version 6.13.5 containing comprehensive annotations for the human proteome." ; dcterms:identifier "tcrd" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-01-10T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:tcrd.api, kgr:tcrd.database_download, kgr:tcrd.documentation ; schema1:identifier "tcrd" ; schema1:name "Target Central Resource Database" ; doap:repository ; skos:altLabel "IDG TCRD", "TCRD", "Target Central Resource Database" ; skos:inScheme "biological systems", "drug discovery", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:tera a schema1:KnowledgeGraph ; rdfs:label "TERA: Toxicological Effect and Risk Assessment Knowledge Graph" ; dcterms:created "2025-10-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description """The Toxicological Effect and Risk Assessment (TERA) Knowledge Graph is an integrated knowledge graph for ecological risk assessment based on chemical effect data from U.S. EPA ECOTOX. TERA aligns toxicological data to non-proprietary identifiers using ontology alignment tools and external sources such as Wikidata, enabling the use of external chemical knowledge graphs including ChEBI, PubChem, and MeSH. The knowledge graph also includes aggregated data from NCBI Taxonomy and Encyclopedia of Life (EOL) trait data. By linking ECOTOX to external sources, TERA enables the extrapolation of chemical effect data, extending the reach of ecological risk assessment while limiting the need for laboratory experiments. The knowledge graph has been applied to predict adverse biological effects of chemicals using knowledge graph embeddings and supports various applications in environmental toxicology and risk assessment. """ ; dcterms:identifier "tera" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-10-28T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:tera.cas-to-mesh-csv, kgr:tera.chebi-to-mesh-csv, kgr:tera.chembl-to-mesh-csv, kgr:tera.cid-to-mesh-csv, kgr:tera.documentation, kgr:tera.ecotox-chemical-nt, kgr:tera.ecotox-taxonomy-nt, kgr:tera.effects-nt, kgr:tera.mesh-nt, kgr:tera.ncbi-nt, kgr:tera.ncbi-to-eol-csv, kgr:tera.python-package, kgr:tera.traits-nt, kgr:tera.zenodo-dataset ; schema1:name "TERA: Toxicological Effect and Risk Assessment Knowledge Graph" ; doap:repository ; skos:inScheme "biological systems", "environment", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:text-mining-kp a schema1:KnowledgeGraph ; rdfs:label "Text Mining KP" ; dcterms:created "2026-01-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Translator Text Mining Provider that produces knowledge-graph assertions from literature mining workflows and exposes them as a KGX graph." ; dcterms:identifier "text-mining-kp" ; dcterms:modified "2026-01-22T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:text-mining-kp.graph, kgr:translator.tmkp.graph ; schema1:name "Text Mining KP" ; doap:repository ; skos:altLabel "tmkp" ; skos:inScheme "biomedical", "literature", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage . kgr:tgma a schema1:Ontology ; rdfs:label "Mosquito gross anatomy ontology" ; dcterms:description "A structured controlled vocabulary of the anatomy of mosquitoes." ; dcterms:identifier "tgma" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:tgma.obo, kgr:tgma.owl ; schema1:name "Mosquito gross anatomy ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:tiga a schema1:DataSource ; rdfs:label "Target Illumination GWAS Analytics" ; dcterms:created "2025-12-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Target Illumination GWAS Analytics (TIGA) database is a manually curated resource containing genotype-phenotype associations pulled from numerous genome-wide association studies (GWAS). TIGA provides bibliometric assessment of scientific consensus based on iCite Relative Citation Ratio and meanRank scores for aggregate multivariate evidence, supporting target illumination and validation in translational research. TIGA is part of the NCATS Translator Knowledge Provider ecosystem." ; dcterms:identifier "tiga" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:tiga.downloads, kgr:tiga.portal ; schema1:identifier "tiga" ; schema1:name "Target Illumination GWAS Analytics" ; skos:altLabel "TIGA" ; skos:inScheme "biomedical", "genomics", "translational" ; adms:status "Active" ; foaf:homepage . kgr:tissues a schema1:Aggregator ; rdfs:label "TISSUES" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "TISSUES is an integrative web resource providing evidence on tissue-specific gene and protein expression in mammals. The database combines manually curated literature, large-scale proteomics and transcriptomics screens, and automatic text mining, mapping all evidence to common protein identifiers and Brenda Tissue Ontology terms with unified confidence scores for cross-comparison." ; dcterms:identifier "tissues" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:bioteque.embeddings, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:ibkh.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:tissues.downloads, kgr:tissues.search, kgr:tissues.web ; schema1:identifier "tissues" ; schema1:name "TISSUES" ; doap:repository ; skos:altLabel "TISSUES 2.0" ; skos:inScheme "anatomy and development", "genomics", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:tmrnawebsite a schema1:DataSource ; rdfs:label "The tmRNA Website" ; dcterms:created "2025-09-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The tmRNA Website is a comprehensive database of transfer-messenger RNA (tmRNA) and SmpB protein sequences involved in bacterial trans-translation. Contains 1,716 unique tmRNA sequences from bacteria and organelles, 2,258 unique SmpB sequences, with 9,387 tmRNA instances across public databases. Provides sequence alignments, structural annotations, BLAST search tools, and Krona-based phylogenetic visualization." ; dcterms:identifier "tmrnawebsite" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:tmrnawebsite.alignments, kgr:tmrnawebsite.blast, kgr:tmrnawebsite.krona-viewer, kgr:tmrnawebsite.portal, kgr:tmrnawebsite.software ; schema1:name "The tmRNA Website" ; skos:altLabel "tmRNA website", "tmRNA-SmpB database" ; skos:inScheme "genomics" ; adms:status "Inactive" ; foaf:homepage . kgr:to a schema1:Ontology ; rdfs:label "Plant Trait Ontology" ; dcterms:description "A controlled vocabulary to describe phenotypic traits in plants." ; dcterms:identifier "to" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:to.obo, kgr:to.owl ; schema1:name "Plant Trait Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:topmed a schema1:DataSource ; rdfs:label "NHLBI Trans-Omics for Precision Medicine" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The NHLBI Trans-Omics for Precision Medicine (TOPMed) program generates scientific resources to enhance understanding of fundamental biological processes that underlie heart, lung, blood, and sleep disorders, providing whole genome sequencing and multi-omics data from diverse populations." ; dcterms:identifier "topmed" ; dcterms:isReferencedBy ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:topmed.data-access, kgr:topmed.portal, kgr:topmed.wgs-counts ; schema1:identifier "topmed" ; schema1:name "NHLBI Trans-Omics for Precision Medicine" ; skos:altLabel "TOPMed", "Trans-Omics for Precision Medicine" ; skos:inScheme "clinical", "genomics", "precision medicine" ; adms:status "Active" ; foaf:homepage . kgr:toxcast a schema1:DataSource ; rdfs:label "ToxCast" ; dcterms:created "2025-09-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "ToxCast (US EPA Toxicity Forecaster) is a high-throughput screening program generating bioactivity profiles for thousands of environmental chemicals across diverse in vitro assays to prioritize substances for hazard characterization, integrate exposure and pathway information, and support predictive toxicology." ; dcterms:identifier "toxcast" ; dcterms:license ; dcterms:modified "2025-09-16T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:aop-db.data, kgr:toxcast.api, kgr:toxcast.downloads, kgr:toxcast.portal ; schema1:name "ToxCast" ; skos:inScheme "biomedical", "environment", "public health", "toxicology" ; adms:status "Active" . kgr:toxin a schema1:KnowledgeGraph ; rdfs:label "TOXIN" ; dcterms:created "2025-08-31T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "TOXIN is a knowledge graph resource integrating curated information about toxic compounds, their molecular targets, mechanisms, pathways, and associated phenotypic or clinical outcomes to facilitate toxicological risk assessment and mechanistic discovery." ; dcterms:identifier "toxin" ; dcterms:isReferencedBy ; dcterms:modified "2025-08-31T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:toxin.web ; schema1:name "TOXIN" ; skos:inScheme "biomedical", "systems biology", "toxicology" ; adms:status "Active" ; foaf:homepage . kgr:trans a schema1:Ontology ; rdfs:label "Pathogen Transmission Ontology" ; dcterms:description "An ontology representing the disease transmission process during which the pathogen is transmitted directly or indirectly from its natural reservoir, a susceptible host or source to a new host." ; dcterms:identifier "trans" ; dcterms:license ; schema1:hasPart kgr:trans.obo, kgr:trans.owl ; schema1:name "Pathogen Transmission Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:translator a schema1:Aggregator ; rdfs:label "NCATS Translator Graph Releases" ; dcterms:created "2026-01-22T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Aggregated, transformed graph datasets distributed by the NCATS Translator program via the STARs release site. Each package provides a KGX graph built from an upstream source and normalized with Translator pipelines." ; dcterms:identifier "translator" ; dcterms:modified "2026-01-22T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:translator.alliance.graph, kgr:translator.bgee.graph, kgr:translator.chembl.graph, kgr:translator.cohd.graph, kgr:translator.ctd.graph, kgr:translator.ctkp.graph, kgr:translator.dakp.graph, kgr:translator.dgidb.graph, kgr:translator.diseases.graph, kgr:translator.drug_rep_hub.graph, kgr:translator.gene2phenotype.graph, kgr:translator.geneticskp.graph, kgr:translator.go_cam.graph, kgr:translator.goa.graph, kgr:translator.gtopdb.graph, kgr:translator.hpoa.graph, kgr:translator.icees.graph, kgr:translator.intact.graph, kgr:translator.panther.graph, kgr:translator.semmeddb.graph, kgr:translator.sider.graph, kgr:translator.signor.graph, kgr:translator.tmkp.graph, kgr:translator.ttd.graph, kgr:translator.ubergraph.graph ; schema1:name "NCATS Translator Graph Releases" ; skos:inScheme "biomedical", "clinical", "drug discovery", "health", "translational" ; skos:related "translator" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:translator-program . kgr:try a schema1:Dataset ; rdfs:label "TRY Plant Trait Database" ; dcterms:created "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The TRY Plant Trait Database aggregates global plant trait measurements contributed by researchers and institutions, widely used for ecological and metabolomic analyses." ; dcterms:identifier "try" ; dcterms:modified "2026-01-15T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:emikg.kg, kgr:emikg.sparql, kgr:emikg.web, kgr:try.portal ; schema1:identifier "try" ; schema1:name "TRY Plant Trait Database" ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ttd a schema1:Aggregator ; rdfs:label "Therapeutic Target Database" ; dcterms:created "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Therapeutic Target Database (TTD) is a comprehensive aggregator providing information about known and explored therapeutic protein and nucleic acid targets, targeted diseases, pathway information, and corresponding drugs directed at these targets. TTD 2024 includes extensive druggability information across three perspectives: molecular interactions/regulations, human system profiles, and cell-based expression variations. The database encompasses 3,730 targets (including 532 successful, 1,442 clinical trial, 239 preclinical/patented, and 1,517 literature-reported targets) and 39,862 drugs, with druggability characteristics covering ligand-specific binding pockets, protein-protein interaction networks, microbiota-drug regulations, target similarity profiles, pathway involvements, tissue distributions, and cell-based expression variations across different diseases and perturbations." ; dcterms:identifier "ttd" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:pharmkg.graph, kgr:translator.ttd.graph, kgr:ttd.biomarker-disease, kgr:ttd.crossmatch, kgr:ttd.drug-combinations, kgr:ttd.drug-disease, kgr:ttd.drugs-raw, kgr:ttd.help, kgr:ttd.kegg-pathways, kgr:ttd.portal, kgr:ttd.sequences-all, kgr:ttd.smiles-inchi, kgr:ttd.structures-all, kgr:ttd.synonyms, kgr:ttd.target-compound, kgr:ttd.target-disease, kgr:ttd.target-drug, kgr:ttd.targets-raw, kgr:ttd.uniprot-all, kgr:ttd.wiki-pathways ; schema1:identifier "ttd" ; schema1:name "Therapeutic Target Database" ; skos:inScheme "biomedical", "drug discovery", "genomics", "pharmacology", "proteomics" ; adms:status "Active" ; foaf:homepage . kgr:tto a schema1:Ontology ; rdfs:label "Teleost taxonomy ontology" ; dcterms:description "An ontology covering the taxonomy of teleosts (bony fish)" ; dcterms:identifier "tto" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:tto.obo, kgr:tto.owl ; schema1:name "Teleost taxonomy ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:txpo a schema1:Ontology ; rdfs:label "Toxic Process Ontology" ; dcterms:description "TOXic Process Ontology (TXPO) systematizes a wide variety of terms involving toxicity courses and processes. The first version of TXPO focuses on liver toxicity." ; dcterms:identifier "txpo" ; dcterms:license ; schema1:hasPart kgr:txpo.owl ; schema1:name "Toxic Process Ontology" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:ubergraph a schema1:KnowledgeGraph ; rdfs:label "Ubergraph" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Ubergraph is an RDF triplestore integrating OBO ontologies into a unified semantic graph" ; dcterms:identifier "ubergraph" ; dcterms:license ; dcterms:modified "2026-01-23T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:automat.ubergraph, kgr:translator.ubergraph.graph, kgr:ubergraph.blazegraph.jnl, kgr:ubergraph.nquads, kgr:ubergraph.rdf ; schema1:identifier "ubergraph" ; schema1:name "Ubergraph" ; doap:repository ; skos:inScheme "other" ; adms:status "Active" ; foaf:homepage . kgr:uberon a schema1:Ontology ; rdfs:label "Uberon multi-species anatomy ontology" ; dcterms:description "An integrated cross-species anatomy ontology covering animals and bridging multiple species-specific ontologies" ; dcterms:identifier "uberon" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:biomarkerkg.nodes.anatomy, kgr:drugmechdb.graph, kgr:efo.obo, kgr:efo.owl, kgr:ibkh.graph, kgr:mechreponet.kg, kgr:microbiomekg.api, kgr:pheknowlator.graph, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:spoke.graph, kgr:uberon.collected-metazoan.owl, kgr:uberon.composite-metazoan.owl, kgr:uberon.composite-vertebrate.owl, kgr:uberon.owl, kgr:uberon.uberon-base.owl, kgr:uberon.uberon-basic.obo, kgr:ubkg.csv, kgr:ubkg.neo4j, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:name "Uberon multi-species anatomy ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:ubkg a schema1:KnowledgeGraph ; rdfs:label "Unified Biomedical Knowledge Graph" ; dcterms:created "2025-05-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Unified Biomedical Knowledge Graph (UBKG) is a knowledge graph infrastructure that represents a set of interrelated concepts from biomedical ontologies and vocabularies. It combines information from the National Library of Medicine's Unified Medical Language System (UMLS) with sets of assertions from ontologies outside the UMLS to establish connections between different sets of assertions that can enable discovery of previously unknown relationships." ; dcterms:identifier "ubkg" ; dcterms:license ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:petagraph.graph, kgr:ubkg.api, kgr:ubkg.csv, kgr:ubkg.guesdt, kgr:ubkg.neo4j ; schema1:name "Unified Biomedical Knowledge Graph" ; doap:repository ; skos:inScheme "biomedical", "genomics", "health" ; adms:status "Active" ; foaf:homepage . kgr:uf-okn a schema1:KnowledgeGraph ; rdfs:label "UF-OKN" ; dcterms:created "2025-08-07T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Urban Flooding Open Knowledge Network (UF-OKN) is an informational infrastructure built with knowledge graphs to connect urban infrastructure with hydrologic forecasts, delivering actionable, real-time and historical flood-risk information as Linked Data for exploration and app development." ; dcterms:identifier "uf-okn" ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:uf-okn.code, kgr:uf-okn.portal ; schema1:name "UF-OKN" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:ukbiobank a schema1:DataSource ; rdfs:label "UK Biobank" ; dcterms:created "2025-06-27T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "UK Biobank is a large-scale biomedical database and research resource containing genetic, lifestyle and health information from half a million UK participants, designed to improve the prevention, diagnosis and treatment of a wide range of serious and life-threatening illnesses." ; dcterms:identifier "ukbiobank" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-12-13T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:disgenet.data, kgr:epigraphdb.graph, kgr:ukbiobank.showcase ; schema1:name "UK Biobank" ; skos:inScheme "biomedical", "clinical", "genomics", "health", "phenotype" ; adms:status "Active" ; foaf:homepage . kgr:umls a schema1:Aggregator ; rdfs:label "Unified Medical Language System" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Unified Medical Language System (UMLS) integrates and distributes over 200 biomedical vocabularies, terminologies, and classification standards to enable interoperability between information systems. It includes the Metathesaurus (terms and codes from vocabularies like CPT, ICD-10-CM, LOINC, MeSH, RxNorm, SNOMED CT), Semantic Network (broad categories and relationships), and SPECIALIST Lexicon (biomedical and general English lexicon with normalization tools)." ; dcterms:identifier "umls" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:icees-kg.graph, kgr:icees-kg.metadata, kgr:icees-kg.trapi, kgr:ndfrt.umls, kgr:umls.api, kgr:umls.browser, kgr:umls.metamorphosys, kgr:umls.release, kgr:umls.semantic_network_browser, kgr:umls.specialist_lexicon, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full ; schema1:identifier "umls" ; schema1:name "Unified Medical Language System" ; skos:altLabel "UMLS" ; skos:inScheme "biomedical", "clinical", "literature" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ncbi . kgr:unibiomap a schema1:KnowledgeGraph ; rdfs:label "UniBioMap" ; dcterms:created "2026-01-28T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "UniBioMap (Unified Biomedical knowledge Map) is an AI-ready biomedical knowledge graph integrating over 30 heterogeneous resources through robust identifier normalization, covering 6 key entity types with 21 million curated relations across 38 fine-grained types. A confident learning framework assigns reliability scores and predicts 34 million high-confidence triples, establishing a foundational resource for target identification and machine learning-based biomedical discovery." ; dcterms:hasVersion "1.0.0" ; dcterms:identifier "unibiomap" ; dcterms:license ; dcterms:modified "2026-01-28T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:unibiomap.auxs, kgr:unibiomap.code, kgr:unibiomap.compound_desc, kgr:unibiomap.disease_desc, kgr:unibiomap.go_desc, kgr:unibiomap.links, kgr:unibiomap.pathway_desc, kgr:unibiomap.phenotype_desc, kgr:unibiomap.pred, kgr:unibiomap.pred.full, kgr:unibiomap.protein_desc, kgr:unibiomap.web ; schema1:name "UniBioMap" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "chemistry and biochemistry", "drug discovery", "genomics", "pathways", "phenotype", "proteomics", "systems biology" ; adms:status "Active" ; foaf:homepage . kgr:unichem a schema1:Aggregator ; rdfs:label "UniChem" ; dcterms:created "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "UniChem is a large-scale non-redundant database maintained by EMBL-EBI that provides cross-references between chemical structures across multiple chemistry resources. It serves as a unified system for creating and maintaining structure-based hyperlinks between chemistry databases, particularly optimized for on-the-fly link creation via REST web services. UniChem aggregates compound identifiers from major chemistry resources including ChEMBL, ChEBI, SureChEMBL, PubChem, DrugBank, and many others, enabling efficient cross-database chemical structure queries using InChI, InChIKey, or source-specific identifiers." ; dcterms:identifier "unichem" ; dcterms:modified "2025-11-04T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full, kgr:unichem.api, kgr:unichem.docs, kgr:unichem.docs.uci, kgr:unichem.search, kgr:unichem.sources ; schema1:identifier "unichem" ; schema1:name "UniChem" ; skos:altLabel "unichem" ; skos:inScheme "chemistry and biochemistry", "drug discovery", "pharmacology" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:unii a schema1:DataSource ; rdfs:label "FDA Global Substance Registration System (UNII)" ; dcterms:created "2025-07-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "FDA's Global Substance Registration System (GSRS) is a comprehensive database that provides Unique Ingredient Identifiers (UNIIs) for substances in FDA-regulated products. UNIIs uniquely define substances based on scientific identity characteristics using ISO 11238 data elements, enabling efficient and accurate exchange of substance information across regulatory domains." ; dcterms:identifier "unii" ; dcterms:isReferencedBy ; dcterms:modified "2025-09-24T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:mechreponet.kg, kgr:unii.data, kgr:unii.legacy, kgr:unii.list, kgr:unii.search ; schema1:identifier "unii" ; schema1:name "FDA Global Substance Registration System (UNII)" ; doap:repository ; skos:inScheme "clinical", "drug discovery", "pharmacology", "public health" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:fda . kgr:uniprot a schema1:DataSource ; rdfs:label "uniprot" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "UniProt Protein Knowledge Base" ; dcterms:identifier "uniprot" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about , , , , , , , ; schema1:hasPart kgr:biogrid.identifiers, kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:chembl.map_to_uniprot, kgr:clinicalkg.graph, kgr:disgenet.data, kgr:drugmechdb.graph, kgr:genecards.gene.annotations, kgr:goa.human, kgr:goa.mapping-files, kgr:goa.mouse, kgr:goa.uniprot, kgr:kg-microbe.graph.biomedical, kgr:kg-microbe.graph.biomedical-function, kgr:kg-microbe.graph.core, kgr:kg-microbe.graph.function, kgr:kg-microbe.graph.raw, kgr:kg-microbe.graph.uniprot, kgr:kinace.portal, kgr:microbiomekg.api, kgr:ncbigene.gene_refseq_uniprotkb_collab, kgr:oma.mapping.uniprot, kgr:pheknowlator.graph, kgr:pombase.genes-products, kgr:pombase.to-uniprot, kgr:proteomehd.data, kgr:rtx-kg2.graph.edges, kgr:rtx-kg2.graph.nodes, kgr:rtx-kg2.neo4j, kgr:spoke.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:swisslipid.enzymes, kgr:swisslipid.lipids2uniprot, kgr:ttd.uniprot-all, kgr:ubkg.csv, kgr:ubkg.neo4j, kgr:unibiomap.auxs, kgr:unibiomap.links, kgr:unibiomap.pred, kgr:unibiomap.pred.full, kgr:uniprot.swissprot.fasta, kgr:uniprot.swissprot.xml, kgr:uniprot.trembl.fasta, kgr:uniprot.trembl.xml ; schema1:identifier "uniprot" ; schema1:name "uniprot" ; doap:repository ; skos:inScheme "biological systems", "biomedical", "proteomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:uniref a schema1:DataSource ; rdfs:label "UniRef" ; dcterms:created "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "UniRef (Universal Protein Resource Reference Clusters) provides clustered sets of protein sequences from the UniProt Knowledgebase and selected UniParc records to obtain complete coverage. UniRef100 combines identical sequences and sub-fragments into a single UniRef entry, UniRef90 clusters sequences with 90% sequence identity, and UniRef50 clusters sequences with 50% sequence identity, providing speed and coverage tradeoffs for similarity searches." ; dcterms:identifier "uniref" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:uniref.api, kgr:uniref.portal, kgr:uniref.uniref100.fasta, kgr:uniref.uniref100.xml, kgr:uniref.uniref50.fasta, kgr:uniref.uniref50.xml, kgr:uniref.uniref90.fasta, kgr:uniref.uniref90.xml ; schema1:identifier "uniref" ; schema1:name "UniRef" ; skos:altLabel "UniRef", "UniRef100", "UniRef50", "UniRef90" ; skos:inScheme "biological systems", "biomedical", "proteomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:ebi . kgr:uo a schema1:Ontology ; rdfs:label "Units of measurement ontology" ; dcterms:description "Metrical units for use in conjunction with PATO" ; dcterms:identifier "uo" ; dcterms:license ; schema1:hasPart kgr:cancer-genome-interpreter.clinicalkg.graph, kgr:clinicalkg.graph, kgr:efo.obo, kgr:efo.owl, kgr:ubkg.csv, kgr:ubkg.neo4j, kgr:uo.json, kgr:uo.obo, kgr:uo.owl ; schema1:name "Units of measurement ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:upa a schema1:Ontology ; rdfs:label "Unipathway" ; dcterms:description "A manually curated resource for the representation and annotation of metabolic pathways" ; dcterms:identifier "upa" ; dcterms:license ; schema1:hasPart kgr:upa.obo, kgr:upa.owl ; schema1:name "Unipathway" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:upheno a schema1:Ontology ; rdfs:label "Unified Phenotype Ontology (uPheno)" ; dcterms:description "The uPheno ontology integrates multiple phenotype ontologies into a unified cross-species phenotype ontology." ; dcterms:identifier "upheno" ; dcterms:license ; schema1:hasPart kgr:upheno.mp-hp-view.owl, kgr:upheno.owl, kgr:upheno.v2.upheno.owl ; schema1:name "Unified Phenotype Ontology (uPheno)" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:vario a schema1:Ontology ; rdfs:label "Variation Ontology" ; dcterms:description "Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations." ; dcterms:identifier "vario" ; dcterms:license ; schema1:hasPart kgr:vario.obo, kgr:vario.owl ; schema1:name "Variation Ontology" ; skos:inScheme "biological systems" ; adms:status "Orphaned" ; foaf:homepage . kgr:vbo a schema1:Ontology ; rdfs:label "Vertebrate Breed Ontology" ; dcterms:description "Vertebrate Breed Ontology is an ontology created to serve as a single computable resource for vertebrate breed names." ; dcterms:identifier "vbo" ; dcterms:license ; schema1:hasPart kgr:vbo.json, kgr:vbo.obo, kgr:vbo.owl, kgr:vbo.vbo-base.json, kgr:vbo.vbo-base.obo, kgr:vbo.vbo-base.owl ; schema1:name "Vertebrate Breed Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:vectology a schema1:Resource ; rdfs:label "Vectology" ; dcterms:created "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Vectology is a software platform and API for exploring relationships among biomedical variables using sentence embedding models derived from biomedical literature. It converts brief variable descriptions into vector representations enabling similarity search, recommendation, and relational insight without manual ontology annotation." ; dcterms:identifier "vectology" ; dcterms:modified "2025-09-03T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:epigraphdb.graph, kgr:vectology.api, kgr:vectology.docs ; schema1:name "Vectology" ; skos:inScheme "biomedical", "genomics", "health", "investigations" ; adms:status "Inactive" ; foaf:homepage . kgr:vhog a schema1:Ontology ; rdfs:label "Vertebrate Homologous Ontology Group Ontology" ; dcterms:description "Description unavailable." ; dcterms:identifier "vhog" ; dcterms:license "Not specified" ; schema1:hasPart kgr:vhog.owl ; schema1:name "Vertebrate Homologous Ontology Group Ontology" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" . kgr:vo a schema1:Ontology ; rdfs:label "Vaccine Ontology" ; dcterms:description "VO is a biomedical ontology in the domain of vaccine and vaccination." ; dcterms:identifier "vo" ; dcterms:license ; schema1:hasPart kgr:pheknowlator.graph, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:vo.owl ; schema1:name "Vaccine Ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:vsao a schema1:Ontology ; rdfs:label "Vertebrate Skeletal Anatomy Ontology-" ; dcterms:description "Vertebrate skeletal anatomy ontology." ; dcterms:identifier "vsao" ; dcterms:license "Not specified" ; schema1:about ; schema1:hasPart kgr:vsao.owl ; schema1:name "Vertebrate Skeletal Anatomy Ontology-" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:vt a schema1:Ontology ; rdfs:label "Vertebrate trait ontology" ; dcterms:description "An ontology of traits covering vertebrates" ; dcterms:identifier "vt" ; dcterms:license ; schema1:hasPart kgr:vt.owl ; schema1:name "Vertebrate trait ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:vto a schema1:Ontology ; rdfs:label "Vertebrate Taxonomy Ontology" ; dcterms:description "Comprehensive hierarchy of extinct and extant vertebrate taxa." ; dcterms:identifier "vto" ; dcterms:license ; schema1:hasPart kgr:vto.obo, kgr:vto.owl ; schema1:name "Vertebrate Taxonomy Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:wbbt a schema1:Ontology ; rdfs:label "C. elegans Gross Anatomy Ontology" ; dcterms:description "A structured controlled vocabulary of the anatomy of Caenorhabditis elegans." ; dcterms:identifier "wbbt" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:wbbt.obo, kgr:wbbt.owl ; schema1:name "C. elegans Gross Anatomy Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:wbls a schema1:Ontology ; rdfs:label "C. elegans development ontology" ; dcterms:description "A structured controlled vocabulary of the development of Caenorhabditis elegans." ; dcterms:identifier "wbls" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:wbls.obo, kgr:wbls.owl ; schema1:name "C. elegans development ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:wbphenotype a schema1:Ontology ; rdfs:label "C. elegans phenotype" ; dcterms:description "A structured controlled vocabulary of Caenorhabditis elegans phenotypes" ; dcterms:identifier "wbphenotype" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:wbphenotype.obo, kgr:wbphenotype.owl, kgr:wbphenotype.wbphenotype-base.owl ; schema1:name "C. elegans phenotype" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:wikidata a schema1:KnowledgeGraph ; rdfs:label "Wikidata" ; dcterms:created "2025-10-31T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Wikidata is a free and open knowledge base that can be read and edited by both humans and machines. Acting as central storage for the structured data of Wikimedia sister projects including Wikipedia, Wikivoyage, Wiktionary, Wikisource, and others, it contains over 119 million data items that anyone can edit. Wikidata provides structured, machine-readable data under a free license (CC0), supports multilingual content, and can be interlinked with other open data sets on the linked data web. The content is available through standard formats, SPARQL queries, and APIs." ; dcterms:identifier "wikidata" ; dcterms:license ; dcterms:modified "2026-02-04T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:identifier-mappings.sparql, kgr:identifier-mappings.tpf, kgr:wikidata.api, kgr:wikidata.dumps.incremental, kgr:wikidata.dumps.json, kgr:wikidata.dumps.lexemes.json, kgr:wikidata.dumps.lexemes.nt, kgr:wikidata.dumps.lexemes.ttl, kgr:wikidata.dumps.rdf.full.nt, kgr:wikidata.dumps.rdf.full.ttl, kgr:wikidata.dumps.rdf.truthy.nt, kgr:wikidata.dumps.xml, kgr:wikidata.entity.api, kgr:wikidata.portal, kgr:wikidata.query.editor, kgr:wikidata.sparql ; schema1:identifier "wikidata" ; schema1:name "Wikidata" ; doap:repository ; skos:altLabel "Wikidata", "Wikidata Knowledge Base" ; skos:inScheme "general" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:wikimedia . kgr:wikipathways a schema1:DataSource ; rdfs:label "WikiPathways" ; dcterms:created "2025-06-05T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "WikiPathways is an open, collaborative platform dedicated to the curation of biological pathways. The database contains 1,913 human-curated pathways across 27 species with 36,334 gene products and 7,052 metabolites, supporting multiple data formats (GPML, GMT, RDF) and programmatic access via SPARQL endpoints and web APIs. Community-driven curation with version control and CI/CD infrastructure enables rapid pathway annotation and knowledge sharing in an open science framework." ; dcterms:identifier "wikipathways" ; dcterms:isReferencedBy , ; dcterms:license ; dcterms:modified "2025-12-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about , ; schema1:hasPart kgr:alzkb.browser, kgr:alzkb.data, kgr:genecards.pathway.data, kgr:indra.cogex.code, kgr:rampdb.database, kgr:rna-kg.kg.edges, kgr:rna-kg.kg.neo4j, kgr:rna-kg.kg.nodes, kgr:spoke.graph, kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:ttd.wiki-pathways, kgr:ubkg.csv, kgr:ubkg.neo4j, kgr:wikipathways.gmt, kgr:wikipathways.gpml, kgr:wikipathways.rdf, kgr:wikipathways.sparql, kgr:wikipathways.web ; schema1:identifier "wikipathways" ; schema1:name "WikiPathways" ; doap:repository ; skos:inScheme "biomedical", "genomics", "pathways" ; skos:notation "FAIRsharing.1x53qk" ; adms:status "Active" ; foaf:homepage . kgr:wildlifekn a schema1:KnowledgeGraph ; rdfs:label "Wildlife-KN" ; dcterms:created "2025-12-08T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Wildlife-KN seeks to create a comprehensive, integrative knowledge network for the management of wildlife in the context of climate change, connecting species data, habitat information, and conservation strategies." ; dcterms:identifier "wildlifekn" ; dcterms:modified "2026-01-06T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:wildlifekn.sparql ; schema1:name "Wildlife-KN" ; skos:inScheme "environment", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:wormbase a schema1:DataSource ; rdfs:label "WormBase" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "WormBase is an online biological database providing comprehensive genomic and biological information about C. elegans and related nematodes, including annotated genomes, gene structures, functional annotations, genetic maps, gene expression data, protein interactions, RNAi phenotypes, and curated literature." ; dcterms:identifier "wormbase" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:string.cog.links, kgr:string.cog.links.detailed, kgr:string.database, kgr:string.protein.links, kgr:string.protein.links.detailed, kgr:string.protein.links.full, kgr:string.protein.physical.links, kgr:string.protein.physical.links.detailed, kgr:string.protein.physical.links.full, kgr:wormbase.api, kgr:wormbase.ftp, kgr:wormbase.gbrowse, kgr:wormbase.parasite, kgr:wormbase.portal, kgr:wormbase.textpresso, kgr:wormbase.wormmine ; schema1:identifier "wormbase" ; schema1:name "WormBase" ; doap:repository ; skos:altLabel "WB" ; skos:inScheme "anatomy and development", "genomics", "organisms" ; adms:status "Active" ; foaf:homepage . kgr:xao a schema1:Ontology ; rdfs:label "Xenopus Anatomy Ontology" ; dcterms:description "XAO represents the anatomy and development of the African frogs Xenopus laevis and tropicalis." ; dcterms:identifier "xao" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:xao.obo, kgr:xao.owl ; schema1:name "Xenopus Anatomy Ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:xco a schema1:Ontology ; rdfs:label "Experimental condition ontology" ; dcterms:description "Conditions under which physiological and morphological measurements are made both in the clinic and in studies involving humans or model organisms." ; dcterms:identifier "xco" ; dcterms:license ; schema1:hasPart kgr:xco.obo, kgr:xco.owl ; schema1:name "Experimental condition ontology" ; doap:repository ; skos:inScheme "biomedical" ; adms:status "Active" ; foaf:homepage . kgr:xenbase a schema1:DataSource ; rdfs:label "Xenbase" ; dcterms:created "2025-08-13T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Xenbase is the Xenopus model organism knowledgebase, a web-accessible resource that integrates all the diverse biological, genomic, genotype and phenotype data available from Xenopus research. It provides comprehensive data on Xenopus laevis and Xenopus tropicalis, including genome assemblies, gene expression data, anatomy information, phenotypes, and developmental biology resources." ; dcterms:identifier "xenbase" ; dcterms:isReferencedBy ; dcterms:modified "2025-10-09T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:biogrid.identifiers, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:xenbase.apis, kgr:xenbase.blast, kgr:xenbase.expression-data, kgr:xenbase.ftp-downloads, kgr:xenbase.genomes, kgr:xenbase.jbrowse-laevis, kgr:xenbase.jbrowse-tropicalis, kgr:xenbase.phenotype-data, kgr:xenbase.web-portal, kgr:xenbase.wiki ; schema1:identifier "xenbase" ; schema1:name "Xenbase" ; doap:repository ; skos:inScheme "anatomy and development", "biomedical", "genomics", "organisms", "phenotype" ; adms:status "Active" ; foaf:homepage . kgr:xlmod a schema1:Ontology ; rdfs:label "HUPO-PSI cross-linking and derivatization reagents controlled vocabulary" ; dcterms:description "A structured controlled vocabulary for cross-linking reagents used with proteomics mass spectrometry." ; dcterms:identifier "xlmod" ; dcterms:license ; schema1:hasPart kgr:xlmod.obo, kgr:xlmod.owl ; schema1:name "HUPO-PSI cross-linking and derivatization reagents controlled vocabulary" ; doap:repository ; skos:inScheme "chemistry and biochemistry" ; adms:status "Active" ; foaf:homepage . kgr:xpo a schema1:Ontology ; rdfs:label "Xenopus Phenotype Ontology" ; dcterms:description "XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevis and tropicalis." ; dcterms:identifier "xpo" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:xpo.obo, kgr:xpo.owl ; schema1:name "Xenopus Phenotype Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:ypo a schema1:Ontology ; rdfs:label "Yeast phenotypes" ; dcterms:description "Description unavailable." ; dcterms:identifier "ypo" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Yeast phenotypes" ; skos:inScheme "biological systems" ; adms:status "Inactive" ; foaf:homepage . kgr:zea a schema1:Ontology ; rdfs:label "Maize gross anatomy" ; dcterms:description "Description unavailable." ; dcterms:identifier "zea" ; dcterms:license "Not specified" ; schema1:about ; schema1:name "Maize gross anatomy" ; skos:inScheme "anatomy and development" ; adms:status "Inactive" ; foaf:homepage . kgr:zeco a schema1:Ontology ; rdfs:label "Zebrafish Experimental Conditions Ontology" ; dcterms:description "Experimental conditions applied to zebrafish, developed to facilitate experiment condition annotation at ZFIN" ; dcterms:identifier "zeco" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:zeco.json, kgr:zeco.obo, kgr:zeco.owl ; schema1:name "Zebrafish Experimental Conditions Ontology" ; doap:repository ; skos:inScheme "environment" ; adms:status "Active" ; foaf:homepage . kgr:zfa a schema1:Ontology ; rdfs:label "Zebrafish anatomy and development ontology" ; dcterms:description "A structured controlled vocabulary of the anatomy and development of the Zebrafish" ; dcterms:identifier "zfa" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:efo.obo, kgr:efo.owl, kgr:zfa.obo, kgr:zfa.owl ; schema1:name "Zebrafish anatomy and development ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:zfin a schema1:DataSource ; rdfs:label "ZFIN" ; dcterms:created "2025-03-09T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Zebrafish Information Network, including the Zebrafish Anatomical Ontology" ; dcterms:identifier "zfin" ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:biogrid.identifiers, kgr:genecards.model.organisms, kgr:kg-monarch.graph, kgr:kg-monarch.graph.duckdb, kgr:kg-monarch.graph.jsonl, kgr:kg-monarch.graph.jsonl.edges, kgr:kg-monarch.graph.jsonl.nodes, kgr:kg-monarch.graph.neo4j, kgr:kg-monarch.graph.neo4j.edges, kgr:kg-monarch.graph.neo4j.nodes, kgr:kg-monarch.graph.rdf, kgr:obo-db-ingest.zfin.json, kgr:obo-db-ingest.zfin.obo, kgr:obo-db-ingest.zfin.owl, kgr:obo-db-ingest.zfin.sssom.tsv, kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:zfin.gene-to-phenotype, kgr:zfin.gene-to-publication, kgr:zfin.zfa ; schema1:identifier "zfin" ; schema1:name "ZFIN" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:zfs a schema1:Ontology ; rdfs:label "Zebrafish developmental stages ontology" ; dcterms:description "Developmental stages of the Zebrafish" ; dcterms:identifier "zfs" ; dcterms:license ; schema1:about ; schema1:hasPart kgr:zfs.obo, kgr:zfs.owl ; schema1:name "Zebrafish developmental stages ontology" ; doap:repository ; skos:inScheme "anatomy and development" ; adms:status "Active" ; foaf:homepage . kgr:zp a schema1:Ontology ; rdfs:label "Zebrafish Phenotype Ontology" ; dcterms:description "The Zebrafish Phenotype Ontology formally defines all phenotypes of the Zebrafish model organism." ; dcterms:identifier "zp" ; dcterms:license ; schema1:hasPart kgr:zp.obo, kgr:zp.owl ; schema1:name "Zebrafish Phenotype Ontology" ; doap:repository ; skos:inScheme "biological systems" ; adms:status "Active" ; foaf:homepage . kgr:zwd a schema1:DataSource ; rdfs:label "Zasha Weinberg Data" ; dcterms:created "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Zasha Weinberg Data repository is a collection of RNA sequence and structure data, including information about regulatory RNA elements, riboswitches, and non-coding RNAs. This data source contributes to the RNAcentral aggregator and focuses on structured RNA data from computational and comparative genomics analyses." ; dcterms:identifier "zwd" ; dcterms:modified "2025-10-29T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:rnacentral.api, kgr:rnacentral.ftp, kgr:rnacentral.portal, kgr:rnacentral.public-db, kgr:zwd.alignments ; schema1:name "Zasha Weinberg Data" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage . kgr:1000genomes.data-portal a schema1:GraphicalInterface ; rdfs:label "IGSR Data Portal" ; dcterms:description "Interactive data portal to browse IGSR/1000 Genomes data by sample, population, technology, data type, and collection" ; schema1:url . kgr:1000genomes.ftp a schema1:Product ; rdfs:label "IGSR FTP Site" ; dcterms:description "Primary FTP site hosting IGSR and 1000 Genomes Project data collections and releases" ; schema1:url . kgr:1000genomes.globus-docs a schema1:DocumentationProduct ; rdfs:label "Globus Access Instructions" ; dcterms:description "Instructions for accessing IGSR data via Globus or Aspera (recommended for bulk transfers)" ; schema1:url . kgr:1000genomes.ncbi-mirror a schema1:Product ; rdfs:label "NCBI Mirror" ; dcterms:description "Mirror of original 1000 Genomes Project data at NCBI" ; schema1:url . kgr:1000genomes.portal a schema1:GraphicalInterface ; rdfs:label "IGSR Portal" ; dcterms:description "Main IGSR website with links to data portal, help, and announcements" ; schema1:url . kgr:4dn.chromatin_tracing a schema1:DataProduct ; rdfs:label "4DN Chromatin Tracing Datasets" ; dcterms:description "A specialized collection of chromatin tracing datasets that provide insights into the 3D organization of chromatin in the nucleus." ; schema1:url . kgr:4dn.hic a schema1:DataProduct ; rdfs:label "4DN Hi-C Datasets" ; dcterms:description "A comprehensive collection of Hi-C datasets generated by the 4DN Network and other reference datasets, available for search, visualization, and download." ; schema1:url . kgr:4dn.higlass a schema1:GraphicalInterface ; rdfs:label "HiGlass" ; dcterms:description "A web-based visualization tool for exploring and comparing genomic data, particularly suited for Hi-C and other 4DN datasets." ; schema1:url . kgr:4dn.jupyterhub a schema1:ProcessProduct ; rdfs:label "4DN JupyterHub" ; dcterms:description "A cloud-based Jupyter environment for analyzing 4DN data without downloading it, including example notebooks for data exploration." ; schema1:url . kgr:4dn.micrometa a schema1:ProcessProduct ; rdfs:label "Micro Meta App" ; dcterms:description "A tool for entering and accessing microscope metadata with standardized formats." ; schema1:url . kgr:4dn.microscopy a schema1:DataProduct ; rdfs:label "4DN Microscopy Datasets" ; dcterms:description "A collection of microscopy datasets, including super-resolution microscopy and chromatin tracing data, for visualizing nuclear organization." ; schema1:url . kgr:5srrnadb.downloads.archaea.sequences a schema1:Product ; rdfs:label "Archaea Sequences FASTA" ; dcterms:description "Archaea 5S rRNA sequences (non-structural alignment) in FASTA format" ; schema1:url . kgr:5srrnadb.downloads.archaea.structural a schema1:Product ; rdfs:label "Archaea Structural Alignment FASTA" ; dcterms:description "Archaea 5S rRNA structural alignment (FASTA with secondary structure annotation)" ; schema1:url . kgr:5srrnadb.downloads.bacteria.sequences a schema1:Product ; rdfs:label "Bacteria Sequences FASTA" ; dcterms:description "Bacteria 5S rRNA sequences (non-structural alignment) in FASTA format" ; schema1:url . kgr:5srrnadb.downloads.bacteria.structural a schema1:Product ; rdfs:label "Bacteria Structural Alignment FASTA" ; dcterms:description "Bacteria 5S rRNA structural alignment (FASTA with secondary structure annotation)" ; schema1:url . kgr:5srrnadb.downloads.eukaryota.sequences a schema1:Product ; rdfs:label "Eukaryota Sequences FASTA" ; dcterms:description "Eukaryota 5S rRNA sequences (non-structural alignment) in FASTA format" ; schema1:url . kgr:5srrnadb.downloads.eukaryota.structural a schema1:Product ; rdfs:label "Eukaryota Structural Alignment FASTA" ; dcterms:description "Eukaryota 5S rRNA structural alignment (FASTA with secondary structure annotation)" ; schema1:url . kgr:5srrnadb.downloads.mitochondria.sequences a schema1:Product ; rdfs:label "Mitochondria Sequences FASTA" ; dcterms:description "Mitochondria 5S rRNA sequences (non-structural alignment) in FASTA format" ; schema1:url . kgr:5srrnadb.downloads.mitochondria.structural a schema1:Product ; rdfs:label "Mitochondria Structural Alignment FASTA" ; dcterms:description "Mitochondria 5S rRNA structural alignment (FASTA with secondary structure annotation)" ; schema1:url . kgr:5srrnadb.downloads.plastids.sequences a schema1:Product ; rdfs:label "Plastids Sequences FASTA" ; dcterms:description "Plastids 5S rRNA sequences (non-structural alignment) in FASTA format" ; schema1:url . kgr:5srrnadb.downloads.plastids.structural a schema1:Product ; rdfs:label "Plastids Structural Alignment FASTA" ; dcterms:description "Plastids 5S rRNA structural alignment (FASTA with secondary structure annotation)" ; schema1:url . kgr:5srrnadb.portal a schema1:GraphicalInterface ; rdfs:label "5SRNAdb Portal" ; dcterms:description "Web portal with search, taxonomic browser, interactive alignments, and secondary structure visualizations" ; schema1:url . kgr:UNESCO-IOC a "Organization" ; rdfs:label "UNESCO Intergovernmental Oceanographic Commission (IOC)" . kgr:aact.dictionary a schema1:DocumentationProduct ; rdfs:label "AACT Data Dictionary" ; dcterms:description "Data dictionary with detailed information about all AACT data elements and their relationship to ClinicalTrials.gov definitions" ; schema1:url . kgr:aact.playground a schema1:GraphicalInterface ; rdfs:label "AACT Playground" ; dcterms:description "Web-based SQL query playground for running queries on AACT data directly from the browser" ; schema1:url . kgr:aact.schema a schema1:DocumentationProduct ; rdfs:label "AACT Database Schema" ; dcterms:description "Complete database schema documentation showing table structure and relationships" ; schema1:url . kgr:ado.owl a schema1:OntologyProduct ; rdfs:label "ado.owl" ; dcterms:description "Alzheimer's Disease Ontology in OWL format" ; schema1:url . kgr:aeo.owl a schema1:OntologyProduct ; rdfs:label "aeo.owl" ; dcterms:description "Anatomical Entity Ontology in OWL format" ; schema1:url . kgr:aero.owl a schema1:OntologyProduct ; rdfs:label "aero.owl" ; dcterms:description "Adverse Event Reporting Ontology in OWL format" ; schema1:url . kgr:afpo.json a schema1:OntologyProduct ; rdfs:label "AfPO (obographs JSON edition)" ; dcterms:description "A direct translation of the AfPO (OWL edition) into OBOGraph JSON format" ; schema1:url . kgr:afpo.obo a schema1:OntologyProduct ; rdfs:label "AfPO (OBO edition)" ; dcterms:description "A direct translation of the AfPO (OWL edition) into OBO format" ; schema1:url . kgr:afpo.owl a schema1:OntologyProduct ; rdfs:label "AfPO (OWL edition)" ; dcterms:description "The main ontology in OWL. Contains all MP terms and links to other OBO ontologies" ; schema1:url . kgr:agro.owl a schema1:OntologyProduct ; rdfs:label "AgrO" ; dcterms:description "Contains all AgrO terms and links to other relevant ontologies." ; schema1:url . kgr:aism.json a schema1:OntologyProduct ; rdfs:label "aism.json" ; dcterms:description "Ontology for the Anatomy of the Insect SkeletoMuscular system (AISM) in JSON format" ; schema1:url . kgr:aism.obo a schema1:OntologyProduct ; rdfs:label "aism.obo" ; dcterms:description "Ontology for the Anatomy of the Insect SkeletoMuscular system (AISM) in OBO format" ; schema1:url . kgr:aism.owl a schema1:OntologyProduct ; rdfs:label "aism.owl" ; dcterms:description "Ontology for the Anatomy of the Insect SkeletoMuscular system (AISM) in OWL format" ; schema1:url . kgr:alliance.api a schema1:ProgrammingInterface ; rdfs:label "Alliance API" ; dcterms:description "REST/JSON API providing programmatic access to integrated gene, orthology, phenotype, disease, expression, and variant endpoints" ; schema1:url . kgr:alliance.downloads a schema1:Product ; rdfs:label "Alliance Data Downloads (Root)" ; dcterms:description "Root directory for release-specific bulk data dumps (JSON, TSV, GAF, and other formats) for genes, orthology, phenotypes, disease associations, alleles, and related integrated datasets; individual per-file products can be programmatically enumerated in future updates" ; schema1:url . kgr:alliance.jbrowse2 a schema1:GraphicalInterface ; rdfs:label "Alliance JBrowse 2" ; dcterms:description "JBrowse 2 genome browser instance for interactive visualization of genomes, annotations, and variants across species" ; schema1:url . kgr:alliance.mine a schema1:GraphicalInterface ; rdfs:label "AllianceMine" ; dcterms:description "AllianceMine instance (InterMine-based) enabling advanced query building over integrated genomic data" ; schema1:url . kgr:alliance.openapi a schema1:ProgrammingInterface ; rdfs:label "Alliance OpenAPI Spec" ; dcterms:description "OpenAPI specification (machine-readable) for the Alliance REST API" ; schema1:url . kgr:alliance.portal a schema1:GraphicalInterface ; rdfs:label "Alliance Web Portal" ; dcterms:description "Primary web portal for integrated cross-species search and exploration of genes, phenotypes, disease models, expression, variants, and orthology summaries" ; schema1:url . kgr:alliance.textpresso a schema1:GraphicalInterface ; rdfs:label "Alliance Textpresso" ; dcterms:description "Textpresso literature mining interface for full-text and ontology term powered searches across curated publications" ; schema1:url . kgr:amphx.obo a schema1:OntologyProduct ; rdfs:label "amphx.obo" ; dcterms:description "The Amphioxus Development and Anatomy Ontology in OBO format" ; schema1:url . kgr:amphx.owl a schema1:OntologyProduct ; rdfs:label "amphx.owl" ; dcterms:description "The Amphioxus Development and Anatomy Ontology in OWL format" ; schema1:url . kgr:aop-db.manual a schema1:DocumentationProduct ; rdfs:label "Manual" ; dcterms:description "The EPA Adverse Outcome Pathway Database (Aop-DB) Application User Manual" ; schema1:url . kgr:aop-db.portal a schema1:GraphicalInterface ; rdfs:label "AOP-DB Information Portal" ; dcterms:description "Public information portal describing the AOP-DB scope, data integration approach, and access points" ; schema1:url . kgr:aop-wiki.devhandbook a schema1:DocumentationProduct ; rdfs:label "AOP Developers' Handbook" ; dcterms:description "This document is the AOP Developers' Handbook supplement to the Guidance Document for developing and assessing Adverse Outcome Pathways (AOPs). The Guidance Document provides a historical background for the AOP development programme, and outlines the elements required to construct an AOP as well as the principles of the AOP framework." ; schema1:url . kgr:aop-wiki.dynamic-aop-xml a schema1:Product ; rdfs:label "AOP-Wiki Dynamic AOP XML Feed" ; dcterms:description "Per-AOP dynamic XML feed accessible via each AOP page (XML button) for up-to-minute content retrieval" ; schema1:url . kgr:aop-wiki.ke-components a schema1:Product ; rdfs:label "AOP-Wiki Key Event Components TSV" ; dcterms:description "Tab-delimited subset of Key Event Components (actions, biological objects/processes with ontology references)" ; schema1:url . kgr:aop-wiki.ke-overview a schema1:Product ; rdfs:label "AOP-Wiki Key Events TSV" ; dcterms:description "Tab-delimited subset listing AOP to Key Event (including MIE, intermediate KE, and Adverse Outcome) associations" ; schema1:url . kgr:aop-wiki.ker a schema1:Product ; rdfs:label "AOP-Wiki Key Event Relationships TSV" ; dcterms:description "Tab-delimited subset listing Key Event Relationships (KERs) with evidence and quantitative understanding indicators" ; schema1:url . kgr:aop-wiki.nightly-xml a schema1:Product ; rdfs:label "AOP-Wiki Nightly XML Export" ; dcterms:description "Nightly XML export (rolling) containing latest AOP-Wiki content (overwritten daily)" ; schema1:url . kgr:aop-wiki.portal a schema1:GraphicalInterface ; rdfs:label "AOP-Wiki Portal" ; dcterms:description "Web portal for browsing, authoring, and reviewing AOPs, key events (KEs), key event relationships (KERs), stressors, and supporting documentation" ; schema1:url . kgr:aop-wiki.quarterly-xml a schema1:Product ; rdfs:label "AOP-Wiki Quarterly XML Snapshot" ; dcterms:description "Quarterly permanent XML snapshot (versioned) of AOP-Wiki content suitable for citation and archival use" ; schema1:url . kgr:apo.obo a schema1:OntologyProduct ; rdfs:label "apo.obo" ; dcterms:description "Ascomycete phenotype ontology in OBO format" ; schema1:url . kgr:apo.owl a schema1:OntologyProduct ; rdfs:label "apo.owl" ; dcterms:description "Ascomycete phenotype ontology in OWL format" ; schema1:url . kgr:apollo_sv.owl a schema1:OntologyProduct ; rdfs:label "apollo_sv.owl" ; dcterms:description "Apollo Structured Vocabulary in OWL format" ; schema1:url . kgr:aragorn.api a schema1:ProgrammingInterface ; rdfs:label "ARAGORN API" ; dcterms:description "TRAPI-compliant API for biomedical question answering" ; schema1:url . kgr:aragorn.ui a schema1:GraphicalInterface ; rdfs:label "ARAGORN User Interface" ; dcterms:description "Web interface for querying ARAGORN" ; schema1:url . kgr:arax.api a schema1:ProgrammingInterface ; rdfs:label "ARAX TRAPI API" ; dcterms:description "TRAPI-compliant API endpoint for programmatic access to ARAX reasoning capabilities. Supports v1.3+ of the Translator Reasoner API standard. Provides /query, /asyncquery, and /entity endpoints." ; schema1:url . kgr:arax.araxi.docs a schema1:DocumentationProduct ; rdfs:label "ARAXi Documentation" ; dcterms:description "ARAXi domain-specific language documentation for expressing knowledge graph analysis workflows." ; schema1:url . kgr:arax.examples a schema1:DocumentationProduct ; rdfs:label "ARAX Examples" ; dcterms:description "Example queries and workflows demonstrating ARAX capabilities for various translational biomedicine use cases." ; schema1:url . kgr:arax.github a schema1:ProgrammingInterface ; rdfs:label "RTX GitHub Repository" ; dcterms:description "Source code repository for ARAX and the RTX system including ARAX-specific modules and RTX-KG2 knowledge graph." ; schema1:url . kgr:arax.ui a schema1:GraphicalInterface ; rdfs:label "ARAX Web UI" ; dcterms:description "Web browser interface for querying ARAX and exploring answers. Provides interactive visual query graph builder, TRAPI operations input, TRAPI JSON input, and ARAXi workflow language input methods." ; schema1:url . kgr:aro.owl a schema1:OntologyProduct ; rdfs:label "aro.owl" ; dcterms:description "Antibiotic Resistance Ontology in OWL format" ; schema1:url . kgr:ars.api a schema1:ProgrammingInterface ; rdfs:label "ARS API" ; dcterms:description "TRAPI-compatible ARS endpoint for asynchronous query submission." ; schema1:url . kgr:ars.portal a schema1:GraphicalInterface ; rdfs:label "ARS Production Portal" ; dcterms:description "Primary web entry point for submitting and tracking Translator ARS queries." ; schema1:url . kgr:atgo.ontology a schema1:OntologyProduct ; rdfs:label "ATGO Hierarchical Ontology" ; dcterms:description "Second-generation hierarchical ontology of 220 autophagy functions built from 156,364 synthetic-lethal genetic interactions across autophagy-activating conditions in Saccharomyces cerevisiae." ; schema1:url . kgr:athena.vocabularies a schema1:Product ; rdfs:label "Athena Vocabulary Downloads" ; dcterms:description "Downloadable standardized vocabulary bundles for OMOP CDM" ; schema1:url . kgr:athena.web a schema1:GraphicalInterface ; rdfs:label "Athena Vocabulary Browser" ; dcterms:description "Web interface for searching and browsing standardized vocabularies" ; schema1:url . kgr:atom.kg a schema1:GraphProduct ; rdfs:label "ATOM Knowledge Graph" ; dcterms:description "Anti-tumor biomaterial knowledge graph constructed from biomedicine literature, containing structured relationships among anti-tumor entities extracted through entity recognition, sentence simplification, triple extraction, and predicate mapping." ; schema1:url . kgr:bactotraits.database a schema1:Product ; rdfs:label "BactoTraits Database and Downloads" ; dcterms:description "BactoTraits database with downloadable trait datasets" ; schema1:url . kgr:batman.web a schema1:GraphicalInterface ; rdfs:label "BATMAN-TCM Web Interface" ; dcterms:description "Interactive BATMAN-TCM web interface for querying compounds, targets, and enriched pathways." ; schema1:url . kgr:bcgo.owl a schema1:OntologyProduct ; rdfs:label "bcgo.owl" ; dcterms:description "Beta Cell Genomics Ontology in OWL format" ; schema1:url . kgr:bco.owl a schema1:OntologyProduct ; rdfs:label "bco.owl" ; dcterms:description "Biological Collections Ontology in OWL format" ; schema1:url . kgr:berkeleybop a "Organization" ; rdfs:label "Berkeley Bioinformatics Open-source Projects" . kgr:bfo.obo a schema1:OntologyProduct ; rdfs:label "bfo.obo" ; dcterms:description "Basic Formal Ontology in OBO format" ; schema1:url . kgr:bfo.owl a schema1:OntologyProduct ; rdfs:label "bfo.owl" ; dcterms:description "Basic Formal Ontology in OWL format" ; schema1:url . kgr:bgee.expr_calls a schema1:Product ; rdfs:label "Bgee Expression Calls" ; dcterms:description "Complete data dump of Bgee expression data for all species" ; schema1:url . kgr:bgee.rdf a schema1:Product ; rdfs:label "Bgee RDF Data" ; dcterms:description "RDF version of the Bgee data for semantic web applications" ; schema1:url . kgr:bgee.site a schema1:GraphicalInterface ; rdfs:label "Bgee Web Interface" ; dcterms:description "Web interface for exploring Bgee data" ; schema1:url . kgr:bgee.sparql a schema1:ProgrammingInterface ; rdfs:label "Bgee SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying Bgee RDF data" ; schema1:url . kgr:bila.owl a schema1:OntologyProduct ; rdfs:label "bila.owl" ; dcterms:description "Bilateria anatomy in OWL format" ; schema1:url . kgr:bind.data a schema1:Product ; rdfs:label "BIND Data" ; dcterms:description "Historical dataset of biomolecular interactions, complexes, and pathways." . kgr:bindingdb.all_2d a schema1:Product ; rdfs:label "BindingDB All Data (2D structures)" ; dcterms:description "Full dataset containing all binding measurements in BindingDB with 2D compound structures" ; schema1:url . kgr:bindingdb.all_3d a schema1:Product ; rdfs:label "BindingDB All Data (3D structures)" ; dcterms:description "Full dataset containing all binding measurements in BindingDB with 3D compound structures" ; schema1:url . kgr:bindingdb.all_tsv a schema1:Product ; rdfs:label "BindingDB All Data (TSV)" ; dcterms:description "Full dataset containing all binding measurements in BindingDB in tab-separated values format" ; schema1:url . kgr:bindingdb.api a schema1:ProgrammingInterface ; rdfs:label "BindingDB RESTful API" ; dcterms:description "RESTful web services for programmatic access to BindingDB data" ; schema1:url . kgr:bindingdb.articles_2d a schema1:Product ; rdfs:label "BindingDB Articles Data (2D structures)" ; dcterms:description "Data curated from articles by BindingDB with 2D compound structures" ; schema1:url . kgr:bindingdb.articles_3d a schema1:Product ; rdfs:label "BindingDB Articles Data (3D structures)" ; dcterms:description "Data curated from articles by BindingDB with 3D compound structures" ; schema1:url . kgr:bindingdb.articles_tsv a schema1:Product ; rdfs:label "BindingDB Articles Data (TSV)" ; dcterms:description "Data curated from articles by BindingDB in tab-separated values format" ; schema1:url . kgr:bindingdb.chebi_mapping a schema1:MappingProduct ; rdfs:label "BindingDB-ChEBI Mapping" ; dcterms:description "Mapping of BindingDB monomer (compound) IDs to ChEBI IDs" ; schema1:url . kgr:bindingdb.chembl_2d a schema1:Product ; rdfs:label "BindingDB ChEMBL Data (2D structures)" ; dcterms:description "Data in BindingDB drawn from ChEMBL with 2D compound structures" ; schema1:url . kgr:bindingdb.chembl_3d a schema1:Product ; rdfs:label "BindingDB ChEMBL Data (3D structures)" ; dcterms:description "Data in BindingDB drawn from ChEMBL with 3D compound structures" ; schema1:url . kgr:bindingdb.chembl_tsv a schema1:Product ; rdfs:label "BindingDB ChEMBL Data (TSV)" ; dcterms:description "Data in BindingDB drawn from ChEMBL in tab-separated values format" ; schema1:url . kgr:bindingdb.cid_mapping a schema1:MappingProduct ; rdfs:label "BindingDB-PubChem CID Mapping" ; dcterms:description "Mapping of BindingDB monomer (compound) IDs to PubChem CIDs" ; schema1:url . kgr:bindingdb.covid19_2d a schema1:Product ; rdfs:label "BindingDB COVID-19 Data (2D structures)" ; dcterms:description "COVID-19 related binding data with 2D compound structures" ; schema1:url . kgr:bindingdb.covid19_3d a schema1:Product ; rdfs:label "BindingDB COVID-19 Data (3D structures)" ; dcterms:description "COVID-19 related binding data with 3D compound structures" ; schema1:url . kgr:bindingdb.covid19_tsv a schema1:Product ; rdfs:label "BindingDB COVID-19 Data (TSV)" ; dcterms:description "COVID-19 related binding data in tab-separated values format" ; schema1:url . kgr:bindingdb.drugbank_mapping a schema1:MappingProduct ; rdfs:label "BindingDB-DrugBank Mapping" ; dcterms:description "Mapping of BindingDB monomer (compound) IDs to DrugBank IDs" ; schema1:url . kgr:bindingdb.patents_2d a schema1:Product ; rdfs:label "BindingDB Patents Data (2D structures)" ; dcterms:description "Data in BindingDB drawn from Patents with 2D compound structures" ; schema1:url . kgr:bindingdb.patents_3d a schema1:Product ; rdfs:label "BindingDB Patents Data (3D structures)" ; dcterms:description "Data in BindingDB drawn from Patents with 3D compound structures" ; schema1:url . kgr:bindingdb.patents_tsv a schema1:Product ; rdfs:label "BindingDB Patents Data (TSV)" ; dcterms:description "Data in BindingDB drawn from Patents in tab-separated values format" ; schema1:url . kgr:bindingdb.pubchem_2d a schema1:Product ; rdfs:label "BindingDB PubChem Data (2D structures)" ; dcterms:description "Data in BindingDB drawn from PubChem with 2D compound structures" ; schema1:url . kgr:bindingdb.pubchem_3d a schema1:Product ; rdfs:label "BindingDB PubChem Data (3D structures)" ; dcterms:description "Data in BindingDB drawn from PubChem with 3D compound structures" ; schema1:url . kgr:bindingdb.pubchem_tsv a schema1:Product ; rdfs:label "BindingDB PubChem Data (TSV)" ; dcterms:description "Data in BindingDB drawn from PubChem in tab-separated values format" ; schema1:url . kgr:bindingdb.sid_mapping a schema1:MappingProduct ; rdfs:label "BindingDB-PubChem SID Mapping" ; dcterms:description "Mapping of BindingDB monomer (compound) IDs to PubChem SIDs" ; schema1:url . kgr:bindingdb.target_sequences a schema1:Product ; rdfs:label "BindingDB Target Sequences" ; dcterms:description "FASTA format protein sequences of all protein targets in BindingDB" ; schema1:url . kgr:bindingdb.uniprot_mapping a schema1:MappingProduct ; rdfs:label "BindingDB-UniProt Mapping" ; dcterms:description "Mapping of BindingDB polymer (single protein) IDs to UniProt IDs" ; schema1:url . kgr:bio2rdf.api a schema1:ProgrammingInterface ; rdfs:label "Bio2RDF REST API" ; dcterms:description "REST API for programmatic access to Bio2RDF linked data with support for SPARQL queries and multiple result formats" ; schema1:url . kgr:bio2rdf.biosearch a schema1:Product ; rdfs:label "BioSearch Semantic Search Engine" ; dcterms:description "BioSearch semantic search engine for Bio2RDF providing full-text and semantic search across integrated biological databases" ; schema1:url . kgr:bio2rdf.dumps a schema1:Product ; rdfs:label "Bio2RDF RDF Dumps and Downloads" ; dcterms:description "Downloadable RDF triple stores and datasets in multiple serialization formats (Turtle, N-Triples, RDF/XML, N3) from 35+ integrated biological databases" ; schema1:url . kgr:bio2rdf.sparql a schema1:ProgrammingInterface ; rdfs:label "Bio2RDF SPARQL Endpoint" ; dcterms:description "SPARQL 1.1 endpoint powered by OpenLink Virtuoso for querying Bio2RDF linked data across 35+ integrated biomedical databases with federated query support" ; schema1:url . kgr:bio2rdf.web a schema1:GraphicalInterface ; rdfs:label "Bio2RDF Web Interface" ; dcterms:description "Web-based interface for browsing and exploring Bio2RDF resources and linked data across biological databases" ; schema1:url . kgr:biobricks-aopwiki.sparql a schema1:ProgrammingInterface ; rdfs:label "BioBricks AOP-Wiki SPARQL" ; dcterms:description "SPARQL endpoint for BioBricks AOP-Wiki" ; schema1:url . kgr:biobricks-ice.sparql a schema1:ProgrammingInterface ; rdfs:label "BioBricks ICE SPARQL" ; dcterms:description "SPARQL endpoint for BioBricks ICE" ; schema1:url . kgr:biobricks-mesh.sparql a schema1:ProgrammingInterface ; rdfs:label "BioBricks MeSH SPARQL" ; dcterms:description "SPARQL endpoint for BioBricks MeSH" ; schema1:url . kgr:biobricks-pubchem-annotations.sparql a schema1:ProgrammingInterface ; rdfs:label "BioBricks PubChem Annotations SPARQL" ; dcterms:description "SPARQL endpoint for BioBricks PubChem Annotations" ; schema1:url . kgr:biobricks-tox21.sparql a schema1:ProgrammingInterface ; rdfs:label "BioBricks Tox21 SPARQL" ; dcterms:description "SPARQL endpoint for BioBricks Tox21" ; schema1:url . kgr:biobricks-toxcast.sparql a schema1:ProgrammingInterface ; rdfs:label "BioBricks ToxCast SPARQL" ; dcterms:description "SPARQL endpoint for BioBricks ToxCast" ; schema1:url . kgr:biogps.api a schema1:ProgrammingInterface ; rdfs:label "BioGPS API" ; dcterms:description "REST-style API for retrieving gene annotations and expression data (JSON/TSV responses)" ; schema1:url . kgr:biogps.downloads a schema1:Product ; rdfs:label "BioGPS Downloads" ; dcterms:description "Bulk annotation and expression data downloads (gene expression compendia, annotation tables)" ; schema1:url . kgr:biogps.faq a schema1:DocumentationProduct ; rdfs:label "BioGPS FAQ / Help" ; dcterms:description "FAQ and usage guidance including plugin system overview and data interpretation notes" ; schema1:url . kgr:biogps.portal a schema1:GraphicalInterface ; rdfs:label "BioGPS Portal" ; dcterms:description "Main BioGPS web portal with searchable gene pages, expression charts, and plugin system aggregating external annotations" ; schema1:url . kgr:biogrid.api a schema1:ProgrammingInterface ; rdfs:label "BioGRID REST API" ; dcterms:description "REST-based web service for programmatic access to BioGRID interaction, chemical association, PTM, and CRISPR (ORCS) data" ; schema1:url . kgr:biogrid.chemicals a schema1:GraphProduct ; rdfs:label "BIOGRID-CHEMICALS-LATEST.chemtab.zip" ; dcterms:description "Protein-chemical interactions for the entire BioGRID dataset. The file is a modified version of the BioGRID Tab 2.0 format, designed to add in columns for chemical specific annotation." ; schema1:url . kgr:biogrid.interactions.mitab a schema1:GraphProduct ; rdfs:label "BIOGRID-ALL-LATEST.mitab.zip" ; dcterms:description "Latest complete BioGRID interaction dataset in PSI-MI MITAB format (non-redundant and raw interactions combined)" ; schema1:url . kgr:biogrid.interactions.tab3 a schema1:GraphProduct ; rdfs:label "BIOGRID-ALL-LATEST.tab3.zip" ; dcterms:description "Latest complete BioGRID interaction dataset in TAB3 (tab-delimited) format" ; schema1:url . kgr:biogrid.ptm a schema1:GraphProduct ; rdfs:label "BIOGRID-PTMS-LATEST.ptm.zip" ; dcterms:description "Post-translational modification (PTM) site dataset curated by BioGRID" ; schema1:url . kgr:biogrid.web a schema1:GraphicalInterface ; rdfs:label "BioGRID Website" ; dcterms:description "Web interface for browsing, searching, and visualizing BioGRID interaction and project data" ; schema1:url . kgr:biohealth.sparql a schema1:ProgrammingInterface ; rdfs:label "Bio-Health KG SPARQL" ; dcterms:description "SPARQL endpoint for Bio-Health KG" ; schema1:url . kgr:biolink.docs a schema1:DocumentationProduct ; rdfs:label "Biolink Model Documentation" ; dcterms:description "Biolink Model Documentation" ; schema1:url . kgr:biolink.infores.docs a schema1:DocumentationProduct ; rdfs:label "Information Resource Registry Model Documentation" ; dcterms:description "Information Resource Registry Model documentation, including descriptions of the information resource (infores) registry itself." ; schema1:url . kgr:biolink.model.graphql a schema1:DataModelProduct ; rdfs:label "Biolink Model GraphQL release" ; dcterms:description "GraphQL release of Biolink Model" ; schema1:url . kgr:biolink.model.json a schema1:DataModelProduct ; rdfs:label "Biolink Model JSON release" ; dcterms:description "JSON schema release of Biolink Model" ; schema1:url . kgr:biolink.model.owl a schema1:DataModelProduct ; rdfs:label "Biolink Model OWL release" ; dcterms:description "OWL release of Biolink Model" ; schema1:url . kgr:biolink.model.proto a schema1:DataModelProduct ; rdfs:label "Biolink Model Protobuf release" ; dcterms:description "Protobuf release of Biolink Model" ; schema1:url . kgr:biolink.model.shacl a schema1:DataModelProduct ; rdfs:label "Biolink Model SHACL release" ; dcterms:description "SHACL release of Biolink Model" ; schema1:url . kgr:biolink.model.shex a schema1:DataModelProduct ; rdfs:label "Biolink Model ShEx release" ; dcterms:description "ShEx release of Biolink Model" ; schema1:url . kgr:biomarkerkg.edges.anatomy a schema1:GraphProduct ; rdfs:label "BKG Anatomy Edges" ; dcterms:description "Biomarker to Anatomy relationships (determined_using_sample_from)" ; schema1:url . kgr:biomarkerkg.edges.compound a schema1:GraphProduct ; rdfs:label "BKG Compound Edges" ; dcterms:description "Biomarker to Compound relationships (indicated_by_above_normal_level_of, indicated_by_below_normal_level_of)" ; schema1:url . kgr:biomarkerkg.edges.condition a schema1:GraphProduct ; rdfs:label "BKG Condition Edges" ; dcterms:description "Biomarker to Condition relationships (diagnostic_for, indicates_risk_of_developing, prognostic_for)" ; schema1:url . kgr:biomarkerkg.edges.role a schema1:GraphProduct ; rdfs:label "BKG Role Edges" ; dcterms:description "Biomarker to Role relationships (has_best_classification)" ; schema1:url . kgr:biomarkerkg.edges.variant a schema1:GraphProduct ; rdfs:label "BKG Variant Edges" ; dcterms:description "Biomarker to Variant relationships (indicated_by_presence_of)" ; schema1:url . kgr:biomarkerkg.nodes.role a schema1:GraphProduct ; rdfs:label "BKG Role Nodes" ; dcterms:description "Nodes from OBCI" ; schema1:url . kgr:biomarkerkg.site a schema1:GraphicalInterface ; rdfs:label "BKG Explorer" ; dcterms:description "Web interface to explore and query the Biomarker Knowledge Graph" ; schema1:url . kgr:bioplanet.data a schema1:Product ; rdfs:label "BioPlanet Pathway Data" ; dcterms:description "Comprehensive integrated pathway resource that incorporates 1,658 distinct human pathways." . kgr:bioportal.api a schema1:ProgrammingInterface ; rdfs:label "BioPortal REST API" ; dcterms:description "REST API for ontology concepts, search, mappings, metrics, and downloads" ; schema1:url . kgr:bioportal.portal a schema1:GraphicalInterface ; rdfs:label "BioPortal Portal" ; dcterms:description "Web portal for searching, browsing, and visualizing biomedical ontologies and mappings" ; schema1:url . kgr:bioteque.bqsupports a schema1:ProcessProduct ; rdfs:label "BQsupports" ; dcterms:description "BQsupports is a tool to uncover biomedical evidence behind experimental paired data." ; schema1:url . kgr:bioteque.code a schema1:ProcessProduct ; rdfs:label "Bioteque code" ; dcterms:description "Scripts used to preprocess and accommodate biomedical datasets into the knowledge database behind the Bioteque repository" ; schema1:url . kgr:bmont.BMONT.owl a schema1:OntologyProduct ; rdfs:label "bmont.BMONT.owl" ; dcterms:description "Includes axioms linking to other ontologies, but no imports of those ontologies" ; schema1:url . kgr:brenda.json a schema1:Product ; rdfs:label "BRENDA JSON Download" ; dcterms:description "Downloadable JSON files containing complete BRENDA enzyme data with schema documentation" ; schema1:url . kgr:brenda.soap a schema1:ProgrammingInterface ; rdfs:label "BRENDA SOAP API" ; dcterms:description "SOAP web service API providing programmatic access to enzyme data with methods for querying kinetic parameters, substrates, products, organisms, sequences, and other enzyme properties" ; schema1:url . kgr:brenda.sparql a schema1:ProgrammingInterface ; rdfs:label "BRENDA SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying BRENDA knowledge graph with semantic web technologies" ; schema1:url . kgr:brenda.textfile a schema1:Product ; rdfs:label "BRENDA Textfile Download" ; dcterms:description "Downloadable text files containing complete BRENDA enzyme data in structured format" ; schema1:url . kgr:brenda.web a schema1:GraphicalInterface ; rdfs:label "BRENDA Web Portal" ; dcterms:description "Web-based search and browsing interface for enzyme data with advanced query capabilities including EC number classification, organism taxonomy, metabolic pathways, enzyme structures, and functional parameters" ; schema1:url . kgr:broad-cdot a "Organization" ; rdfs:label "Broad Institute Center for the Development of Therapeutics (CDoT)" . kgr:broad-institute a "Organization" ; rdfs:label "Broad Institute" . kgr:bspo.obo a schema1:OntologyProduct ; rdfs:label "bspo.obo" ; dcterms:description "Biological Spatial Ontology in OBO format" ; schema1:url . kgr:bspo.owl a schema1:OntologyProduct ; rdfs:label "bspo.owl" ; dcterms:description "Biological Spatial Ontology in OWL format" ; schema1:url . kgr:bto.json a schema1:OntologyProduct ; rdfs:label "bto.json" ; dcterms:description "BRENDA tissue / enzyme source in JSON format" ; schema1:url . kgr:bto.obo a schema1:OntologyProduct ; rdfs:label "bto.obo" ; dcterms:description "BRENDA tissue / enzyme source in OBO format" ; schema1:url . kgr:bto.owl a schema1:OntologyProduct ; rdfs:label "bto.owl" ; dcterms:description "BRENDA tissue / enzyme source in OWL format" ; schema1:url . kgr:bv-brc.api a schema1:ProgrammingInterface ; rdfs:label "BV-BRC Data API" ; dcterms:description "Application Programming Interface for programmatic access to BV-BRC data" ; schema1:url . kgr:bv-brc.cli a schema1:ProcessProduct ; rdfs:label "BV-BRC CLI" ; dcterms:description "Command Line Interface for batch access to BV-BRC data and services" ; schema1:url . kgr:bv-brc.ftp a schema1:Product ; rdfs:label "BV-BRC FTP" ; dcterms:description "FTP server providing direct access to BV-BRC data files" ; schema1:url . kgr:bv-brc.site a schema1:GraphicalInterface ; rdfs:label "BV-BRC Web Interface" ; dcterms:description "Web-based interface providing access to BV-BRC data, tools, and services" ; schema1:url . kgr:cacao.api a schema1:ProgrammingInterface ; rdfs:label "GO Wiki API" ; dcterms:description "MediaWiki API endpoint for accessing CACAO and related GO Wiki content programmatically." ; schema1:url . kgr:cacao.gowiki a schema1:GraphicalInterface ; rdfs:label "CACAO GO Wiki Page" ; dcterms:description "GO Wiki page for CACAO project information and annotation competition content." ; schema1:url . kgr:cam-kp.api a schema1:ProgrammingInterface ; rdfs:label "CAM-KP REST API" ; dcterms:description "TRAPI-compliant REST API for programmatic access to causal knowledge graphs supporting Translator ecosystem integration and federated querying" ; schema1:url . kgr:cam-kp.automat a schema1:GraphicalInterface ; rdfs:label "CAM-KP on Automat" ; dcterms:description "Interactive knowledge provider interface within RENCI's Automat platform for discovering and integrating CAM-KP with other biomedical data sources" ; schema1:url . kgr:cam-kp.documentation a schema1:DocumentationProduct ; rdfs:label "CAM-KP Documentation" ; dcterms:description "Comprehensive API documentation, SPARQL endpoint documentation, and developer guides for querying and integrating CAM-KP" ; schema1:url . kgr:cam-kp.sparql a schema1:ProgrammingInterface ; rdfs:label "CAM-KP SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for complex semantic queries on the RDF triplestore containing causal activity models, ontologies, and integrated biomedical knowledge" ; schema1:url . kgr:cancer-genome-interpreter.api a schema1:ProgrammingInterface ; rdfs:label "Cancer Genome Interpreter REST API" ; dcterms:description "REST API for programmatic access to annotation and interpretation endpoints" ; schema1:url . kgr:cancer-genome-interpreter.portal a schema1:GraphicalInterface ; rdfs:label "Cancer Genome Interpreter Portal" ; dcterms:description "Web portal for submitting variant lists, interpreting oncogenicity, and exploring biomarkers" ; schema1:url . kgr:cancer-registry-kg.api a schema1:ProgrammingInterface ; rdfs:label "Cancer Registry Query API" ; dcterms:description "Python-based API using RDFLib for parameterized SPARQL query execution against cancer registry knowledge graph. Provides template-based queries for hypothesis generation, treatment sequence analysis, and multi-dataset integration without requiring users to write SPARQL directly." ; schema1:url . kgr:cancer-registry-kg.cdi a schema1:Product ; rdfs:label "Concentrated Disadvantage Index Integration" ; dcterms:description "Linked neighborhood concentrated disadvantage index (CDI) dataset for Louisiana and Kentucky census tracts, enabling socioeconomic analysis of cancer incidence patterns and disparities. Demonstrates knowledge graph capability for third-party data integration to explain variation in cancer outcomes." ; schema1:url . kgr:cancer-registry-kg.kcr a schema1:GraphProduct ; rdfs:label "Kentucky Cancer Registry Knowledge Graph" ; dcterms:description "RDF-based knowledge graph containing 207,766 unique tumor records from Kentucky Cancer Registry (2010-2016) with 232 columns of cancer data. Contains 48,409,945 triples demonstrating the framework's ability to dynamically integrate multiple registry datasets without code changes." ; schema1:url . kgr:cancer-registry-kg.ltr a schema1:GraphProduct ; rdfs:label "Louisiana Tumor Registry Knowledge Graph" ; dcterms:description "RDF-based knowledge graph containing 374,682 unique tumor records from Louisiana Tumor Registry (2000-2016) with 240 columns of NAACCR-standardized cancer data including demographics, tumor characteristics, treatment, and outcomes. Contains 90,673,527 triples stored in Virtuoso triplestore with SPARQL endpoint access." ; schema1:url . kgr:cancer-registry-kg.visualization a schema1:GraphicalInterface ; rdfs:label "Gephi-Based KG Visualization" ; dcterms:description "Interactive graph visualization service using Gephi with Semantic Web Importer plugin to query Virtuoso SPARQL endpoint. Provides high-level and low-level visualizations with graph algorithms (PageRank, connected components, modularity) for pattern discovery and anomaly detection." ; schema1:url . kgr:caro.owl a schema1:OntologyProduct ; rdfs:label "caro.owl" ; dcterms:description "Common Anatomy Reference Ontology in OWL format" ; schema1:url . kgr:catalogue-of-life.annual-releases a schema1:Product ; rdfs:label "Annual Releases" ; dcterms:description "Annual comprehensive Catalogue of Life releases (Base Release with expert curation and Extended Release with broader source integration) with permanent archiving and DOI assignment" ; schema1:url . kgr:catalogue-of-life.api a schema1:ProgrammingInterface ; rdfs:label "Catalogue of Life API" ; dcterms:description "RESTful JSON API providing programmatic access to species information, taxonomic names, classification hierarchies, and species identifiers with multiple endpoints" ; schema1:url . kgr:catalogue-of-life.checklistbank a schema1:Product ; rdfs:label "ChecklistBank Repository" ; dcterms:description "ChecklistBank repository infrastructure for publishing, discovery, and management of taxonomic datasets with data standardization to ColDP format and quality control workflows" ; schema1:url . kgr:catalogue-of-life.documentation a schema1:DocumentationProduct ; rdfs:label "Catalogue of Life Documentation" ; dcterms:description "Comprehensive documentation including API specifications, data format standards (ColDP, DwC-A), usage guides, citation guidelines, and taxonomic contribution workflows" ; schema1:url . kgr:catalogue-of-life.downloads a schema1:Product ; rdfs:label "Data Downloads" ; dcterms:description "Downloadable Catalogue of Life datasets in multiple standardized formats including Catalogue of Life Data Package (ColDP), Darwin Core Archive, ACEF, TextTree, and MySQL dumps" ; schema1:url . kgr:catalogue-of-life.web a schema1:GraphicalInterface ; rdfs:label "Catalogue of Life Web Portal" ; dcterms:description "Interactive web portal for browsing hierarchical taxonomy from kingdom level through infraspecific ranks with expandable taxonomy tree and full-text search for species names and synonyms" ; schema1:url . kgr:cdao.owl a schema1:OntologyProduct ; rdfs:label "cdao.owl" ; dcterms:description "Comparative Data Analysis Ontology in OWL format" ; schema1:url . kgr:cdiscvocab.adam a schema1:Product ; rdfs:label "ADaM Controlled Terminology" ; dcterms:description "Analysis Data Model controlled terminology for efficient generation, replication, review, and submission of analysis results from clinical trial data." ; schema1:url . kgr:cdiscvocab.browser a schema1:GraphicalInterface ; rdfs:label "NCI EVS CDISC Terminology Browser" ; dcterms:description "NCI Enterprise Vocabulary Services browser for exploring and searching CDISC Controlled Terminology concepts within NCI Thesaurus." ; schema1:url . kgr:cdiscvocab.cdash a schema1:Product ; rdfs:label "CDASH Controlled Terminology" ; dcterms:description "Clinical Data Acquisition Standards Harmonization controlled terminology for consistent data collection across research studies. A subset of SDTM terminology." ; schema1:url . kgr:cdiscvocab.ddf a schema1:Product ; rdfs:label "DDF Controlled Terminology" ; dcterms:description "Digital Data Flow controlled terminology for study definition reference architecture and standardized study definitions repository development." ; schema1:url . kgr:cdiscvocab.definexml a schema1:Product ; rdfs:label "Define-XML Controlled Terminology" ; dcterms:description "Define-XML controlled terminology providing enumeration values for the CDISC Define-XML data exchange standard." ; schema1:url . kgr:cdiscvocab.glossary a schema1:Product ; rdfs:label "CDISC Glossary Terminology" ; dcterms:description "CDISC Glossary controlled terminology harmonizing definitions, acronyms, abbreviations, and initials across CDISC-managed standards initiatives." ; schema1:url . kgr:cdiscvocab.mrct a schema1:Product ; rdfs:label "MRCT Glossary Terminology" ; dcterms:description "MRCT Center Clinical Research Glossary controlled terminology with plain language definitions for enhancing health literacy and participant communications." ; schema1:url . kgr:cdiscvocab.protocol a schema1:Product ; rdfs:label "Protocol Controlled Terminology" ; dcterms:description "Protocol Representation Model controlled terminology for commonly used words and phrases in clinical research protocols, supporting PRM and CTR-XML standards." ; schema1:url . kgr:cdiscvocab.sdtm a schema1:Product ; rdfs:label "SDTM Controlled Terminology" ; dcterms:description "Study Data Tabulation Model controlled terminology for clinical research data tabulation and FDA/PMDA regulatory submissions. Includes CDISC questionnaires, ratings, and scales terminology." ; schema1:url . kgr:cdiscvocab.send a schema1:Product ; rdfs:label "SEND Controlled Terminology" ; dcterms:description "Standard for Exchange of Nonclinical Data controlled terminology for preclinical study data interchange and regulatory submissions to FDA." ; schema1:url . kgr:cdiscvocab.tmf a schema1:Product ; rdfs:label "TMF Controlled Terminology" ; dcterms:description "Trial Master File controlled terminology for standardized structure, nomenclature, and metadata for electronic trial master file content." ; schema1:url . kgr:cdno.obo a schema1:OntologyProduct ; rdfs:label "cdno.obo" ; dcterms:description "Compositional Dietary Nutrition Ontology in OBO format" ; schema1:url . kgr:cdno.owl a schema1:OntologyProduct ; rdfs:label "cdno.owl" ; dcterms:description "Compositional Dietary Nutrition Ontology in OWL format" ; schema1:url . kgr:cebs.api a schema1:ProgrammingInterface ; rdfs:label "CEBS API" ; dcterms:description "API access to CEBS data" ; schema1:url . kgr:cebs.data a schema1:Product ; rdfs:label "CEBS Study Data" ; dcterms:description "Toxicology study data from NTP and other programs" ; schema1:url . kgr:cebs.web a schema1:GraphicalInterface ; rdfs:label "CEBS Search Interface" ; dcterms:description "Web interface for searching and browsing CEBS toxicology data" ; schema1:url . kgr:cellmarker.act a schema1:GraphicalInterface ; rdfs:label "ACT (Annotation of Cell Types)" ; dcterms:description "ACT is a tool that makes cell type annotation easier by integrating the CellMarker resource." ; schema1:url . kgr:cellmarker.all a schema1:Product ; rdfs:label "All Cell Markers" ; dcterms:description "All cell markers of different cell types from different tissues in human and mouse" ; schema1:url . kgr:cellmarker.human a schema1:Product ; rdfs:label "Human Cell Markers" ; dcterms:description "Cell markers of different cell types from different tissues in human" ; schema1:url . kgr:cellmarker.mouse a schema1:Product ; rdfs:label "Mouse Cell Markers" ; dcterms:description "Cell markers of different cell types from different tissues in mouse" ; schema1:url . kgr:cellmarker.singlecell a schema1:Product ; rdfs:label "Single Cell Markers" ; dcterms:description "Cell markers derived from single-cell sequencing researches in human and mouse" ; schema1:url . kgr:cellosaurus.api.rest a schema1:ProgrammingInterface ; rdfs:label "Cellosaurus API" ; dcterms:description "RESTful API for programmatic access to Cellosaurus data" ; schema1:url . kgr:cellosaurus.api.sparql a schema1:ProgrammingInterface ; rdfs:label "Cellosaurus SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying Cellosaurus RDF data" ; schema1:url . kgr:cellosaurus.clastr a schema1:ProcessProduct ; rdfs:label "CLASTR STR Similarity Search" ; dcterms:description "CLASTR tool for STR similarity search across cell lines" ; schema1:url . kgr:cellosaurus.rdf a schema1:Product ; rdfs:label "Cellosaurus RDF" ; dcterms:description "Complete Cellosaurus data in RDF format using the Turtle syntax" ; schema1:url . kgr:cellosaurus.site a schema1:GraphicalInterface ; rdfs:label "Cellosaurus Web Interface" ; dcterms:description "Web interface for searching and exploring Cellosaurus data" ; schema1:url . kgr:cellosaurus.txt a schema1:Product ; rdfs:label "Cellosaurus Text" ; dcterms:description "Complete Cellosaurus data in flat text format" ; schema1:url . kgr:cellosaurus.xml a schema1:Product ; rdfs:label "Cellosaurus XML" ; dcterms:description "Cellosaurus data in XML format" ; schema1:url . kgr:cellosaurus.xrefs a schema1:MappingProduct ; rdfs:label "Cellosaurus Cross-references" ; dcterms:description "Cellosaurus cross-references in tab-delimited format" ; schema1:url . kgr:ceph.obo a schema1:OntologyProduct ; rdfs:label "oboformat edition" ; dcterms:description "oboformat edition" ; schema1:url . kgr:ceph.owl a schema1:OntologyProduct ; rdfs:label "main version" ; dcterms:description "main version" ; schema1:url . kgr:cfde-ddkg.downloads a schema1:Product ; rdfs:label "DDKG Downloads Manifest" ; dcterms:description "JSON manifest listing downloadable DDKG resources and files." ; schema1:url . kgr:cfde-ddkg.portal a schema1:GraphicalInterface ; rdfs:label "DDKG Web Interface" ; dcterms:description "Interactive web interface for browsing and querying Data Distillery Knowledge Graph resources." ; schema1:url . kgr:cfde-gse.api a schema1:ProgrammingInterface ; rdfs:label "CFDE-GSE API" ; dcterms:description "RESTful API for programmatic access to Common Fund gene set collections and enrichment analysis" ; schema1:url . kgr:cfde-gse.genesets a schema1:Product ; rdfs:label "CFDE Gene Set Collections" ; dcterms:description "Standardized gene set collections from Common Fund programs in GMT format" ; schema1:url . kgr:cfde-gse.graph a schema1:GraphProduct ; rdfs:label "CFDE-GSE Knowledge Graph" ; dcterms:description "Neo4j knowledge graph containing integrated gene sets from multiple Common Fund programs with cross-references" . kgr:cfde-gse.portal a schema1:GraphicalInterface ; rdfs:label "CFDE Gene Set Enrichment Portal" ; dcterms:description "Interactive web interface for cross-program gene set enrichment analysis across Common Fund datasets" ; schema1:url . kgr:cgi-team a "Organization" ; rdfs:label "Cancer Genome Interpreter Team" . kgr:cgnc.genes a schema1:Product ; rdfs:label "CGNC Genes" ; dcterms:description "All CGNC public data, including CGNC ID, Entrez Gene ID, Ensembl Gene ID, gene symbol, gene name, gene synonym, curation status and last edit date." ; schema1:url . kgr:chea-kg.api a schema1:ProgrammingInterface ; rdfs:label "ChEA-KG API" ; dcterms:description "RESTful API for programmatic access to ChIP-seq derived transcription factor binding data" ; schema1:url . kgr:chea-kg.chipseq a schema1:Product ; rdfs:label "ChEA ChIP-seq Data" ; dcterms:description "Processed ChIP-seq datasets with transcription factor binding sites and target gene annotations" ; schema1:url . kgr:chea-kg.graph a schema1:GraphProduct ; rdfs:label "ChEA-KG Database" ; dcterms:description "Neo4j database containing transcription factors, target genes, and regulatory relationships from ChIP-seq studies" . kgr:chea-kg.portal a schema1:GraphicalInterface ; rdfs:label "ChEA-KG Explorer" ; dcterms:description "Interactive web interface for exploring transcription factor-target gene relationships with regulatory network visualization" ; schema1:url . kgr:chebi.chebi_core.obo a schema1:OntologyProduct ; rdfs:label "chebi_core, no xrefs" ; dcterms:description "chebi_core, no xrefs" ; schema1:url . kgr:chebi.chebi_lite.obo a schema1:OntologyProduct ; rdfs:label "chebi_lite, no syns or xrefs" ; dcterms:description "chebi_lite, no syns or xrefs" ; schema1:url . kgr:chebi.json a schema1:OntologyProduct ; rdfs:label "chebi.json" ; dcterms:description "Chemical Entities of Biological Interest in JSON format" ; schema1:url . kgr:chebi.obo a schema1:OntologyProduct ; rdfs:label "chebi.obo" ; dcterms:description "Chemical Entities of Biological Interest in OBO format" ; schema1:url . kgr:chebi.owl a schema1:OntologyProduct ; rdfs:label "chebi.owl" ; dcterms:description "Chemical Entities of Biological Interest in OWL format" ; schema1:url . kgr:chebi.owl.gz a schema1:OntologyProduct ; rdfs:label "chebi, compressed owl" ; dcterms:description "chebi, compressed owl" ; schema1:url . kgr:chembl.api a schema1:ProgrammingInterface ; rdfs:label "ChEMBL API" ; dcterms:description "RESTful API for accessing ChEMBL data programmatically" ; schema1:url . kgr:chembl.mysql a schema1:Product ; rdfs:label "ChEMBL MySQL" ; dcterms:description "MySQL database dump of the complete ChEMBL database" ; schema1:url . kgr:chembl.postgres a schema1:Product ; rdfs:label "ChEMBL PostgreSQL" ; dcterms:description "PostgreSQL database dump of the complete ChEMBL database" ; schema1:url . kgr:chembl.rdf a schema1:Product ; rdfs:label "ChEMBL RDF" ; dcterms:description "RDF version of the ChEMBL database" ; schema1:url . kgr:chembl.sdf a schema1:Product ; rdfs:label "ChEMBL SDF" ; dcterms:description "Structure data files for all chemical compounds in ChEMBL" ; schema1:url . kgr:chembl.site a schema1:GraphicalInterface ; rdfs:label "ChEMBL Web Interface" ; dcterms:description "Web interface for searching and exploring ChEMBL data" ; schema1:url . kgr:chembl.sparql a schema1:ProgrammingInterface ; rdfs:label "ChEMBL SPARQL" ; dcterms:description "SPARQL endpoint for the ChEMBL RDF data" ; schema1:url . kgr:chembl.sqlite a schema1:Product ; rdfs:label "ChEMBL SQLite" ; dcterms:description "SQLite database file containing the complete ChEMBL database" ; schema1:url . kgr:chemicalchecker.api a schema1:ProgrammingInterface ; rdfs:label "Chemical Checker RESTful API" ; dcterms:description "Programmatic interface for Chemical Checker data." ; schema1:url . kgr:chemicalchecker.signatures a schema1:Product ; rdfs:label "Chemical Checker Signatures" ; dcterms:description "Precomputed signatures for small molecules, suitable for machine learning." ; schema1:url . kgr:chemicalchecker.signaturizer a schema1:ProcessProduct ; rdfs:label "Signaturizer" ; dcterms:description "Software tool for producing bioactivity signature vectors." ; schema1:url . kgr:cheminf.owl a schema1:OntologyProduct ; rdfs:label "cheminf.owl" ; dcterms:description "Chemical Information Ontology in OWL format" ; schema1:url . kgr:chemont.classyfire a schema1:GraphicalInterface ; rdfs:label "ClassyFire Web Interface" ; dcterms:description "ClassyFire web interface for chemical classification and ontology exploration" ; schema1:url . kgr:chemont.obo a schema1:OntologyProduct ; rdfs:label "ChemOnt OBO Ontology" ; dcterms:description "ChemOnt OBO format ontology file (version 2.1)" ; schema1:url . kgr:chiro.obo a schema1:OntologyProduct ; rdfs:label "chiro.obo" ; dcterms:description "CHEBI Integrated Role Ontology in OBO format" ; schema1:url . kgr:chiro.owl a schema1:OntologyProduct ; rdfs:label "chiro.owl" ; dcterms:description "CHEBI Integrated Role Ontology in OWL format" ; schema1:url . kgr:chmo.owl a schema1:OntologyProduct ; rdfs:label "chmo.owl" ; dcterms:description "Chemical Methods Ontology in OWL format" ; schema1:url . kgr:cido.owl a schema1:OntologyProduct ; rdfs:label "cido.owl" ; dcterms:description "Coronavirus Infectious Disease Ontology in OWL format" ; schema1:url . kgr:ciel.covid19 a schema1:Product ; rdfs:label "CIEL COVID-19 Starter Set" ; dcterms:description "COVID-19 concept starter set for rapid implementation" ; schema1:url . kgr:ciel.dictionary a schema1:Product ; rdfs:label "CIEL Concept Dictionary" ; dcterms:description "CIEL concept dictionary with over 55,000 medical concepts" ; schema1:url . kgr:ciel.mpx a schema1:Product ; rdfs:label "CIEL Monkeypox Starter Set" ; dcterms:description "Monkeypox (mpox) concept starter set" ; schema1:url . kgr:ciel.ocl a schema1:GraphicalInterface ; rdfs:label "CIEL on OCL Online" ; dcterms:description "Web interface for browsing CIEL concept dictionary via Open Concept Lab" ; schema1:url . kgr:cio.obo a schema1:OntologyProduct ; rdfs:label "cio.obo" ; dcterms:description "Confidence Information Ontology in OBO format" ; schema1:url . kgr:cio.owl a schema1:OntologyProduct ; rdfs:label "cio.owl" ; dcterms:description "Confidence Information Ontology in OWL format" ; schema1:url . kgr:circbase.docs a schema1:DocumentationProduct ; rdfs:label "circBase Documentation" ; dcterms:description "Help and documentation describing circBase data sources, identifiers, and usage notes." ; schema1:url . kgr:circbase.downloads a schema1:Product ; rdfs:label "circBase Bulk Downloads" ; dcterms:description "Bulk data downloads (BED/GFF and sequence files) for circular RNAs provided via the downloads CGI page." ; schema1:url . kgr:circbase.portal a schema1:GraphicalInterface ; rdfs:label "circBase Portal" ; dcterms:description "Web interface for searching and browsing circular RNA annotations across species." ; schema1:url . kgr:cito.documentation a schema1:DocumentationProduct ; rdfs:label "CiTO Documentation" ; dcterms:description "CiTO documentation and specification" ; schema1:url . kgr:cito.ttl a schema1:OntologyProduct ; rdfs:label "CiTO Turtle File" ; dcterms:description "CiTO ontology in Turtle RDF format" ; schema1:url . kgr:civic.api.v1 a schema1:ProgrammingInterface ; rdfs:label "CIViC REST API (V1 - Deprecated)" ; dcterms:description "REST API for programmatic access to the CIViC database (deprecated but still accessible)." ; schema1:url . kgr:civic.api.v2 a schema1:ProgrammingInterface ; rdfs:label "CIViC GraphQL API (V2)" ; dcterms:description "GraphQL API for programmatic access to the CIViC database." ; schema1:url . kgr:civic.data.acceptedsubmittedvariants a schema1:Product ; rdfs:label "CIViC Accepted and Submitted Variants (Nightly)" ; dcterms:description "CIViC Accepted and Submitted Variants, nightly version" ; schema1:url . kgr:civic.data.acceptedvariants a schema1:Product ; rdfs:label "CIViC Accepted Variants (Nightly)" ; dcterms:description "CIViC Accepted Variants, nightly version" ; schema1:url . kgr:civic.data.assertions a schema1:Product ; rdfs:label "CIViC Assertions (Nightly)" ; dcterms:description "CIViC Assertion summaries, nightly version" ; schema1:url . kgr:civic.data.evidence a schema1:Product ; rdfs:label "CIViC Clinical Evidence (Nightly)" ; dcterms:description "CIViC Clinical Evidence summaries, nightly version" ; schema1:url . kgr:civic.data.features a schema1:Product ; rdfs:label "CIViC Features (Nightly)" ; dcterms:description "CIViC Feature summaries, nightly version" ; schema1:url . kgr:civic.data.molecularprofile a schema1:Product ; rdfs:label "CIViC Molecular Profiles (Nightly)" ; dcterms:description "CIViC Molecular Profile summaries, nightly version" ; schema1:url . kgr:civic.data.variantgroups a schema1:Product ; rdfs:label "CIViC Variant Groups (Nightly)" ; dcterms:description "CIViC Variant Group summaries, nightly version" ; schema1:url . kgr:civic.data.variants a schema1:Product ; rdfs:label "CIViC Variants (Nightly)" ; dcterms:description "CIViC Variant summaries, nightly version" ; schema1:url . kgr:civic.site a schema1:GraphicalInterface ; rdfs:label "CIViC Web Interface" ; dcterms:description "Web interface that allows searching, browsing, and curating content in the CIViC database." ; schema1:url . kgr:cl-kg.api.neo4j a schema1:ProgrammingInterface ; rdfs:label "CL-KG Neo4j graph instance" ; dcterms:description "Publicly available Neo4j instance for CL-KG." ; schema1:url . kgr:cl.cl-base.json a schema1:OntologyProduct ; rdfs:label "CL base module (OBOGraph-JSON version)" ; dcterms:description "complete CL but with no imports or external axioms" ; schema1:url . kgr:cl.cl-base.obo a schema1:OntologyProduct ; rdfs:label "CL base module (OBO version)" ; dcterms:description "complete CL but with no imports or external axioms" ; schema1:url . kgr:cl.cl-base.owl a schema1:OntologyProduct ; rdfs:label "CL base module" ; dcterms:description "complete CL but with no imports or external axioms" ; schema1:url . kgr:cl.cl-basic.json a schema1:OntologyProduct ; rdfs:label "Basic CL (OBOGraph-JSON version)" ; dcterms:description "Basic version, no inter-ontology axioms" ; schema1:url . kgr:cl.cl-basic.obo a schema1:OntologyProduct ; rdfs:label "Basic CL (OBO version)" ; dcterms:description "Basic version, no inter-ontology axioms" ; schema1:url . kgr:cl.cl-basic.owl a schema1:OntologyProduct ; rdfs:label "Basic CL" ; dcterms:description "Basic version, no inter-ontology axioms" ; schema1:url . kgr:cl.json a schema1:OntologyProduct ; rdfs:label "CL OBOGraph-JSON format edition" ; dcterms:description "Complete ontology, plus inter-ontology axioms, and imports modules merged in" ; schema1:url . kgr:cl.obo a schema1:OntologyProduct ; rdfs:label "CL obo format edition" ; dcterms:description "Complete ontology, plus inter-ontology axioms, and imports modules merged in" ; schema1:url . kgr:cl.owl a schema1:OntologyProduct ; rdfs:label "Main CL OWL edition" ; dcterms:description "Complete ontology, plus inter-ontology axioms, and imports modules" ; schema1:url . kgr:clao.obo a schema1:OntologyProduct ; rdfs:label "clao.obo" ; dcterms:description "Collembola Anatomy Ontology in OBO format" ; schema1:url . kgr:clao.owl a schema1:OntologyProduct ; rdfs:label "clao.owl" ; dcterms:description "Collembola Anatomy Ontology in OWL format" ; schema1:url . kgr:climatemodelskg.sparql a schema1:ProgrammingInterface ; rdfs:label "Climate Models KG SPARQL" ; dcterms:description "SPARQL endpoint for Climate Models KG" ; schema1:url . kgr:clingen.actionability a schema1:Product ; rdfs:label "Clinical Actionability Curations" ; dcterms:description "ClinGen Clinical Actionability evaluations assess the clinical actions available to manage risk for patients with specific genetic disorders. These curations score the actionability of gene-disease pairs based on severity, likelihood of disease, efficacy of interventions, and knowledge base." ; schema1:url . kgr:clingen.dosage a schema1:Product ; rdfs:label "Dosage Sensitivity Curations" ; dcterms:description "ClinGen Dosage Sensitivity curations evaluate whether genes and genomic regions are sensitive to copy number variation. These curations determine if haploinsufficiency (loss of one copy) or triplosensitivity (gain of one copy) of a gene/region causes disease." ; schema1:url . kgr:clingen.evrepo.api a schema1:ProgrammingInterface ; rdfs:label "ClinGen Evidence Repository API" ; dcterms:description "REST API providing access to ClinGen's Evidence Repository for variant pathogenicity assessments. Allows programmatic retrieval of structured evidence used to evaluate the clinical significance of genetic variants." ; schema1:url . kgr:clingen.gene-disease a schema1:Product ; rdfs:label "Gene-Disease Validity Curations" ; dcterms:description "ClinGen Gene-Disease Validity curations assess the strength of evidence supporting or refuting a gene's role in a given disease. These curations classify evidence as Definitive, Strong, Moderate, Limited, No Reported Evidence, or Disputed." ; schema1:url . kgr:clingen.variant a schema1:Product ; rdfs:label "Variant Pathogenicity Curations" ; dcterms:description "ClinGen Variant Pathogenicity curations assess the clinical significance of genetic variants based on ACMG/AMP guidelines. Expert panels classify variants as Pathogenic, Likely Pathogenic, Uncertain Significance, Likely Benign, or Benign." ; schema1:url . kgr:clingen.variant.frameworks a schema1:ProcessProduct ; rdfs:label "Variant Interpretation Frameworks" ; dcterms:description "Framework for standardized interpretation of genetic variants, including disease-specific modifications to the ACMG/AMP guidelines. These frameworks guide variant classification by expert panels and clinical laboratories." ; schema1:url . kgr:clingen.web.interface a schema1:GraphicalInterface ; rdfs:label "ClinGen Search Interface" ; dcterms:description "Web-based interface for accessing ClinGen's curated data. Allows users to search and browse curated gene-disease pairs, variant interpretations, and other ClinGen resources." ; schema1:url . kgr:clinical-data-kp.docs a schema1:DocumentationProduct ; rdfs:label "Clinical Data KP Documentation" ; dcterms:description "Team and tooling documentation for the Clinical Data Provider." ; schema1:url . kgr:clinical-data-kp.portal a schema1:GraphicalInterface ; rdfs:label "Clinical Data KP Portal" ; dcterms:description "Translator project portal describing clinical data provider activities." ; schema1:url . kgr:clinicaltrialsgov.aact a schema1:Product ; rdfs:label "AACT Database" ; dcterms:description "Aggregate Analysis of ClinicalTrials.gov (AACT) - A relational PostgreSQL database containing all clinical trial data, updated daily" ; schema1:url . kgr:clinicaltrialsgov.api a schema1:ProgrammingInterface ; rdfs:label "ClinicalTrials.gov API" ; dcterms:description "RESTful API providing programmatic access to all clinical trial records with JSON and CSV output formats" ; schema1:url . kgr:clinicaltrialsgov.docs a schema1:DocumentationProduct ; rdfs:label "ClinicalTrials.gov Documentation" ; dcterms:description "Comprehensive documentation covering data structure, data element definitions, and API usage" ; schema1:url . kgr:clinicaltrialsgov.downloads a schema1:Product ; rdfs:label "ClinicalTrials.gov Data Downloads" ; dcterms:description "Bulk downloads of all clinical trial records in multiple formats including XML, JSON, and CSV" ; schema1:url . kgr:clinicaltrialsgov.search a schema1:GraphicalInterface ; rdfs:label "ClinicalTrials.gov Search Portal" ; dcterms:description "Web-based interface for searching and browsing clinical trials with advanced filtering and export capabilities" ; schema1:url . kgr:clinvar.api a schema1:ProgrammingInterface ; rdfs:label "ClinVar API (E-utilities)" ; dcterms:description "API access to ClinVar data through NCBI's E-utilities, supporting programmatic queries and data retrieval." ; schema1:url . kgr:clinvar.tab a schema1:Product ; rdfs:label "ClinVar Tab-Delimited Files" ; dcterms:description "Tab-delimited files summarizing variant data, gene-condition relationships, and other aspects of ClinVar data." ; schema1:url . kgr:clinvar.vcf.grch37 a schema1:Product ; rdfs:label "ClinVar VCF (GRCh37)" ; dcterms:description "ClinVar data in VCF format for GRCh37 human genome assembly, containing variant information and clinical significance." ; schema1:url . kgr:clinvar.vcf.grch38 a schema1:Product ; rdfs:label "ClinVar VCF (GRCh38)" ; dcterms:description "ClinVar data in VCF format for GRCh38 human genome assembly, containing variant information and clinical significance." ; schema1:url . kgr:clinvar.web a schema1:GraphicalInterface ; rdfs:label "ClinVar Web Interface" ; dcterms:description "Web interface for searching and browsing ClinVar data, with detailed variant information and evidence." ; schema1:url . kgr:clinvar.xml a schema1:Product ; rdfs:label "ClinVar XML" ; dcterms:description "Complete public data set in XML format containing comprehensive variant information, clinical significance classifications, and supporting evidence." ; schema1:url . kgr:clyh.obo a schema1:OntologyProduct ; rdfs:label "clyh.obo" ; dcterms:description "Clytia hemisphaerica Development and Anatomy Ontology in OBO format" ; schema1:url . kgr:clyh.owl a schema1:OntologyProduct ; rdfs:label "clyh.owl" ; dcterms:description "Clytia hemisphaerica Development and Anatomy Ontology in OWL format" ; schema1:url . kgr:cm4ai_talent_kg.web_interface a schema1:GraphicalInterface ; rdfs:label "CM4AI Talent KG Web Interface" ; dcterms:description "Web-based interface for browsing and exploring the CM4AI Talent Knowledge Graph" ; schema1:url . kgr:cmap.clue a schema1:GraphicalInterface ; rdfs:label "CLUE Platform" ; dcterms:description "Cloud-based user interface providing suite of apps for querying gene expression signatures, browsing perturbagen data, searching metadata, and visualizing connectivity results" ; schema1:url . kgr:cmap.connectopedia a schema1:DocumentationProduct ; rdfs:label "Connectopedia" ; dcterms:description "Comprehensive knowledge base containing glossary, tutorials, analytical methods, experimental protocols, and detailed documentation" ; schema1:url . kgr:cmap.data_downloads a schema1:Product ; rdfs:label "CMap Data Downloads" ; dcterms:description "Data releases containing replicate-collapsed signatures and gene expression profiles in GCTx matrix format available for download" ; schema1:url . kgr:cmap.python_api a schema1:ProgrammingInterface ; rdfs:label "cmapBQ Python Library" ; dcterms:description "Python library cmapBQ for programmatic access to CMap data through Google BigQuery with query capabilities for signatures and metadata" ; schema1:url . kgr:cmap.query_app a schema1:GraphicalInterface ; rdfs:label "CLUE Query App" ; dcterms:description "Query app enabling users to search CMap database with custom gene expression signatures to find perturbagens with similar or opposing transcriptional effects" ; schema1:url . kgr:cmo.obo a schema1:OntologyProduct ; rdfs:label "cmo.obo" ; dcterms:description "Clinical measurement ontology in OBO format" ; schema1:url . kgr:cmo.owl a schema1:OntologyProduct ; rdfs:label "cmo.owl" ; dcterms:description "Clinical measurement ontology in OWL format" ; schema1:url . kgr:cob.cob-base.owl a schema1:OntologyProduct ; rdfs:label "COB base module" ; dcterms:description "base module for COB" ; schema1:url . kgr:cob.cob-native.owl a schema1:OntologyProduct ; rdfs:label "COB native module" ; dcterms:description "COB with native IDs preserved rather than rewired to OBO IDs" ; schema1:url . kgr:cob.cob-to-external.owl a schema1:OntologyProduct ; rdfs:label "COB to external" ; dcterms:description "COB to external" ; schema1:url . kgr:cob.owl a schema1:OntologyProduct ; rdfs:label "COB" ; dcterms:description "Core Ontology for Biology and Biomedicine, main ontology" ; schema1:url . kgr:cob.products.demo-cob.owl a schema1:OntologyProduct ; rdfs:label "COB demo ontology (experimental)" ; dcterms:description "demo of COB including subsets of other ontologies (Experimental, for demo purposes only)" ; schema1:url . kgr:cog.download.cog-24-csv a schema1:Product ; rdfs:label "COG 2024 Functional Assignments" ; dcterms:description "COG 2024 functional assignment table in CSV format." ; schema1:url . kgr:cog.download.cogorg24-fasta a schema1:Product ; rdfs:label "COG 2024 Protein FASTA" ; dcterms:description "Protein FASTA set for the COG 2024 release." ; schema1:url . kgr:cog.portal a schema1:GraphicalInterface ; rdfs:label "COG Project Portal" ; dcterms:description "NCBI web interface for exploring the 2024 COG update and project resources." ; schema1:url . kgr:cohd.api a schema1:ProgrammingInterface ; rdfs:label "COHD API" ; dcterms:description "RESTful API providing programmatic access to clinical concept frequencies, co-occurrences, and associations with JSON output" ; schema1:url . kgr:cohd.docs a schema1:DocumentationProduct ; rdfs:label "COHD Documentation" ; dcterms:description "API documentation covering endpoint descriptions, data structure, and usage examples" ; schema1:url . kgr:cohd.notebooks a schema1:ProcessProduct ; rdfs:label "COHD API Examples" ; dcterms:description "Python Jupyter notebooks demonstrating COHD API usage and analysis workflows" ; schema1:url . kgr:cohd.portal a schema1:GraphicalInterface ; rdfs:label "COHD Web Interface" ; dcterms:description "Interactive web interface for exploring clinical concept frequencies and associations" ; schema1:url . kgr:colao.obo a schema1:OntologyProduct ; rdfs:label "colao.obo" ; dcterms:description "Coleoptera Anatomy Ontology (COLAO) in OBO format" ; schema1:url . kgr:colao.owl a schema1:OntologyProduct ; rdfs:label "colao.owl" ; dcterms:description "Coleoptera Anatomy Ontology (COLAO) in OWL format" ; schema1:url . kgr:compartments.downloads a schema1:Product ; rdfs:label "COMPARTMENTS Bulk Downloads" ; dcterms:description "Bulk data downloads of localization scores and evidence files." ; schema1:url . kgr:compartments.portal a schema1:GraphicalInterface ; rdfs:label "COMPARTMENTS Portal" ; dcterms:description "Web interface for exploring protein subcellular localization evidence across integrated sources." ; schema1:url . kgr:compath.catalog a schema1:GraphicalInterface ; rdfs:label "ComPath Catalog" ; dcterms:description "Catalog interface for browsing curated pathway mappings." ; schema1:url . kgr:compath.curation-protocol a schema1:DocumentationProduct ; rdfs:label "ComPath Curation Protocol" ; dcterms:description "Curation protocol and methodology documentation for ComPath mappings." ; schema1:url . kgr:compath.overview a schema1:GraphicalInterface ; rdfs:label "ComPath Overview" ; dcterms:description "Overview interface for pathway databases integrated in ComPath." ; schema1:url . kgr:compath.portal a schema1:GraphicalInterface ; rdfs:label "ComPath Portal" ; dcterms:description "Main ComPath portal for pathway database harmonization and analysis." ; schema1:url . kgr:compath.similarity a schema1:GraphicalInterface ; rdfs:label "ComPath Similarity Explorer" ; dcterms:description "Interface for pathway similarity comparisons." ; schema1:url . kgr:complexportal.arabidopsis.complextab a schema1:Product ; rdfs:label "Complex Portal Arabidopsis thaliana ComplexTAB" ; dcterms:description "Arabidopsis thaliana complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.bsubtilis.complextab a schema1:Product ; rdfs:label "Complex Portal Bacillus subtilis ComplexTAB" ; dcterms:description "Bacillus subtilis complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.cattle.complextab a schema1:Product ; rdfs:label "Complex Portal Cattle ComplexTAB" ; dcterms:description "Cattle complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.chicken.complextab a schema1:Product ; rdfs:label "Complex Portal Chicken ComplexTAB" ; dcterms:description "Chicken complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.complextab a schema1:Product ; rdfs:label "Complex Portal ComplexTAB" ; dcterms:description "Complex Portal data in ComplexTAB flat-file format for easy parsing and Excel compatibility, organized by species" ; schema1:url . kgr:complexportal.dictyostelium.complextab a schema1:Product ; rdfs:label "Complex Portal Dictyostelium discoideum ComplexTAB" ; dcterms:description "Dictyostelium discoideum complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.documentation a schema1:DocumentationProduct ; rdfs:label "Complex Portal Documentation" ; dcterms:description "Comprehensive documentation covering data formats, API usage, and complex annotation guidelines" ; schema1:url . kgr:complexportal.dog.complextab a schema1:Product ; rdfs:label "Complex Portal Dog ComplexTAB" ; dcterms:description "Dog complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.ecoli.complextab a schema1:Product ; rdfs:label "Complex Portal E. coli ComplexTAB" ; dcterms:description "E. coli complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.fissionyeast.complextab a schema1:Product ; rdfs:label "Complex Portal Fission Yeast ComplexTAB" ; dcterms:description "Fission yeast complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.fruitfly.complextab a schema1:Product ; rdfs:label "Complex Portal Fruit Fly ComplexTAB" ; dcterms:description "Fruit fly complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.hpylori.complextab a schema1:Product ; rdfs:label "Complex Portal Helicobacter pylori ComplexTAB" ; dcterms:description "Helicobacter pylori complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.human.complextab a schema1:Product ; rdfs:label "Complex Portal Human ComplexTAB" ; dcterms:description "Human complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.human.psi25 a schema1:Product ; rdfs:label "Complex Portal Human PSI-MI XML 2.5" ; dcterms:description "Human complexes dataset from Complex Portal in PSI-MI XML 2.5 format" ; schema1:url . kgr:complexportal.human.psi30 a schema1:Product ; rdfs:label "Complex Portal Human PSI-MI XML 3.0" ; dcterms:description "Human complexes dataset from Complex Portal in PSI-MI XML 3.0 format" ; schema1:url . kgr:complexportal.lamprey.complextab a schema1:Product ; rdfs:label "Complex Portal Lamprey ComplexTAB" ; dcterms:description "Lamprey complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.leishmania.complextab a schema1:Product ; rdfs:label "Complex Portal Leishmania major ComplexTAB" ; dcterms:description "Leishmania major complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.mouse.complextab a schema1:Product ; rdfs:label "Complex Portal Mouse ComplexTAB" ; dcterms:description "Mouse complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.mouse.psi25 a schema1:Product ; rdfs:label "Complex Portal Mouse PSI-MI XML 2.5" ; dcterms:description "Mouse complexes dataset from Complex Portal in PSI-MI XML 2.5 format" ; schema1:url . kgr:complexportal.paeru.complextab a schema1:Product ; rdfs:label "Complex Portal Pseudomonas aeruginosa ComplexTAB" ; dcterms:description "Pseudomonas aeruginosa complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.pig.complextab a schema1:Product ; rdfs:label "Complex Portal Pig ComplexTAB" ; dcterms:description "Pig complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.portal a schema1:GraphicalInterface ; rdfs:label "Complex Portal Web Interface" ; dcterms:description "Web portal for searching, browsing, and visualizing macromolecular complexes with detailed annotations and structural information" ; schema1:url . kgr:complexportal.psi25 a schema1:Product ; rdfs:label "Complex Portal PSI-MI XML 2.5" ; dcterms:description "Complete Complex Portal dataset in PSI-MI XML 2.5 format, organized by species" ; schema1:url . kgr:complexportal.psi30 a schema1:Product ; rdfs:label "Complex Portal PSI-MI XML 3.0" ; dcterms:description "Complete Complex Portal dataset in PSI-MI XML 3.0 format, organized by species" ; schema1:url . kgr:complexportal.pufferfish.takifugu.complextab a schema1:Product ; rdfs:label "Complex Portal Pufferfish (Takifugu) ComplexTAB" ; dcterms:description "Pufferfish (Takifugu rubripes) complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.pufferfish.tetraodon.complextab a schema1:Product ; rdfs:label "Complex Portal Pufferfish (Tetraodon) ComplexTAB" ; dcterms:description "Pufferfish (Tetraodon nigroviridis) complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.rabbit.complextab a schema1:Product ; rdfs:label "Complex Portal Rabbit ComplexTAB" ; dcterms:description "Rabbit complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.rat.complextab a schema1:Product ; rdfs:label "Complex Portal Rat ComplexTAB" ; dcterms:description "Rat complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.sarscov2.complextab a schema1:Product ; rdfs:label "Complex Portal SARS-CoV-2 ComplexTAB" ; dcterms:description "SARS-CoV-2 complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.seaurchin.complextab a schema1:Product ; rdfs:label "Complex Portal Sea Urchin ComplexTAB" ; dcterms:description "Sea urchin complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.sheep.complextab a schema1:Product ; rdfs:label "Complex Portal Sheep ComplexTAB" ; dcterms:description "Sheep complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.toxoplasma.complextab a schema1:Product ; rdfs:label "Complex Portal Toxoplasma gondii ComplexTAB" ; dcterms:description "Toxoplasma gondii complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.webservice a schema1:ProgrammingInterface ; rdfs:label "Complex Portal Web Service" ; dcterms:description "RESTful web service API for programmatic access to Complex Portal data" ; schema1:url . kgr:complexportal.worm.complextab a schema1:Product ; rdfs:label "Complex Portal Worm ComplexTAB" ; dcterms:description "Worm complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.xenopus.complextab a schema1:Product ; rdfs:label "Complex Portal African Clawed Frog ComplexTAB" ; dcterms:description "African clawed frog complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:complexportal.yeast.psi25 a schema1:Product ; rdfs:label "Complex Portal Yeast PSI-MI XML 2.5" ; dcterms:description "Yeast complexes dataset from Complex Portal in PSI-MI XML 2.5 format" ; schema1:url . kgr:complexportal.zebrafish.complextab a schema1:Product ; rdfs:label "Complex Portal Zebrafish ComplexTAB" ; dcterms:description "Zebrafish complexes dataset from Complex Portal in ComplexTAB format" ; schema1:url . kgr:connections-hypothesis-kp.code a schema1:ProcessProduct ; rdfs:label "Connections Hypothesis KP Source Code" ; dcterms:description "Source code for the Connections Hypothesis Provider API implementation." ; schema1:url . kgr:connections-hypothesis-kp.smartapi a schema1:DocumentationProduct ; rdfs:label "Connections Hypothesis KP SmartAPI Entry" ; dcterms:description "SmartAPI registry listing for CHP service metadata and interface documentation." ; schema1:url . kgr:corum.all_complexes a schema1:Product ; rdfs:label "CORUM All Complexes" ; dcterms:description "Complete dataset of all curated protein complexes in CORUM in tab-delimited format" ; schema1:url . kgr:corum.core_complexes a schema1:Product ; rdfs:label "CORUM Core Complexes" ; dcterms:description "Core dataset of manually curated, non-redundant protein complexes in CORUM in tab-delimited format" ; schema1:url . kgr:corum.mitab a schema1:Product ; rdfs:label "CORUM MITAB" ; dcterms:description "Dataset of all CORUM protein complexes in PSI-MI MITAB 2.5 format" ; schema1:url . kgr:corum.psi_mi a schema1:Product ; rdfs:label "CORUM PSI-MI" ; dcterms:description "Dataset of all CORUM protein complexes in PSI-MI XML format (Proteomics Standards Initiative)" ; schema1:url . kgr:cosmic.downloads a schema1:Product ; rdfs:label "COSMIC Downloads" ; dcterms:description "Top-level downloads page with links to COSMIC release files (registration/license required)" ; schema1:url . kgr:cosmic.kb.overview a schema1:DocumentationProduct ; rdfs:label "COSMIC-KB Portal overview" ; dcterms:description "COSMIC Knowledgebase overview and documentation pages" ; schema1:url . kgr:cosmic.portal a schema1:GraphicalInterface ; rdfs:label "COSMIC Portal" ; dcterms:description "Web portal for exploring somatic mutations, gene pages, cancer types, and curated annotations" ; schema1:url . kgr:cpdb.downloads a schema1:Product ; rdfs:label "ConsensusPathDB Data Downloads" ; dcterms:description "Download files containing integrated interaction and pathway data" ; schema1:url . kgr:cpdb.web a schema1:GraphicalInterface ; rdfs:label "ConsensusPathDB Web Interface" ; dcterms:description "Web-based interface for integrated pathway and interaction analysis from multiple databases (inactive)" ; schema1:url . kgr:cpic.alleles a schema1:DataProduct ; rdfs:label "CPIC Allele & Diplotype Function Tables" ; dcterms:description "Allele function and diplotype-to-phenotype tables standardized for clinical pharmacogenetic test result interpretation" ; schema1:url . kgr:cpic.api a schema1:ProgrammingInterface ; rdfs:label "CPIC Database & API" ; dcterms:description "Structured data (database and API) for CPIC guideline-derived gene–drug relationships, allele function, and standardized terms" ; schema1:url . kgr:cpic.cyp2d6_translation a schema1:DocumentationProduct ; rdfs:label "CPIC CYP2D6 Genotype to Phenotype Project" ; dcterms:description "CYP2D6 genotype to phenotype translation project resources" ; schema1:url . kgr:cpic.genes_drugs a schema1:DataProduct ; rdfs:label "CPIC Genes-Drugs Tables" ; dcterms:description "Curated gene–drug pair tables linking pharmacogenes with affected medications and guideline recommendations" ; schema1:url . kgr:cpic.guidelines a schema1:DocumentationProduct ; rdfs:label "CPIC Clinical Practice Guidelines" ; dcterms:description "Peer-reviewed, evidence-based, updatable pharmacogenetic clinical practice guidelines translating genotype into prescribing recommendations" ; schema1:url . kgr:cpic.onepager a schema1:DocumentationProduct ; rdfs:label "CPIC One-Page Summary" ; dcterms:description "One-page summary document providing concise overview of CPIC mission and guideline process (DOCX)" ; schema1:url . kgr:cpic.overview.slides a schema1:DocumentationProduct ; rdfs:label "CPIC Overview Presentation Slides" ; dcterms:description "Overview slide deck describing CPIC assumptions, development process, and implementation guidance (PowerPoint)" ; schema1:url . kgr:cpic.portal a schema1:GraphicalInterface ; rdfs:label "CPIC Website Portal" ; dcterms:description "Main CPIC website portal providing access to guidelines, genes-drugs tables, alleles, publications, resources, and implementation information" ; schema1:url . kgr:cpic.sop a schema1:DocumentationProduct ; rdfs:label "CPIC Pharmacogene Curation SOP" ; dcterms:description "Standard operating procedure PDF for assigning allele function and translating diplotypes to phenotypes" ; schema1:url . kgr:cpic.term_standardization a schema1:DocumentationProduct ; rdfs:label "CPIC Term Standardization Project" ; dcterms:description "Term standardization project resources for clinical pharmacogenetic test result terminology" ; schema1:url . kgr:cqs.code a schema1:ProcessProduct ; rdfs:label "CQS Source Repository" ; dcterms:description "Source code and templates implementing Curated Query Service inference logic." ; schema1:url . kgr:cqs.docs a schema1:DocumentationProduct ; rdfs:label "CQS Documentation" ; dcterms:description "Service overview and usage guidance for CQS in the Translator wiki." ; schema1:url . kgr:creeds.automatic_disease_signatures a schema1:Product ; rdfs:label "CREEDS Automatic Disease Signatures" ; dcterms:description "Automatic gene expression signatures derived from disease signatures" ; schema1:url . kgr:creeds.automatic_single_drug a schema1:Product ; rdfs:label "CREEDS Automatic Single Drug Perturbations" ; dcterms:description "Automatic gene expression signatures derived from single drug perturbations" ; schema1:url . kgr:creeds.automatic_single_gene a schema1:Product ; rdfs:label "CREEDS Automatic Single Gene Perturbations" ; dcterms:description "Automatic gene expression signatures derived from single gene perturbations" ; schema1:url . kgr:creeds.drugmatrix a schema1:Product ; rdfs:label "CREEDS DrugMatrix single drug perturbations" ; dcterms:description "DrugMatrix single drug perturbations" ; schema1:url . kgr:creeds.manual_disease_signatures a schema1:Product ; rdfs:label "CREEDS Manual Disease Signatures" ; dcterms:description "Manual gene expression signatures derived from disease signatures" ; schema1:url . kgr:creeds.manual_single_drug a schema1:Product ; rdfs:label "CREEDS Manual Single Drug Perturbations" ; dcterms:description "Manual gene expression signatures derived single drug perturbations" ; schema1:url . kgr:creeds.manual_single_gene a schema1:Product ; rdfs:label "CREEDS Manual Single Gene Perturbations" ; dcterms:description "Manual gene expression signatures derived from single gene perturbations" ; schema1:url . kgr:creeds.web_interface a schema1:GraphicalInterface ; rdfs:label "CREEDS Web Interface" ; dcterms:description "Web interface for exploring CREEDS gene expression signatures" ; schema1:url . kgr:cro.owl a schema1:OntologyProduct ; rdfs:label "CRO" ; dcterms:description "CRO" ; schema1:url . kgr:cteno.owl a schema1:OntologyProduct ; rdfs:label "cteno.owl" ; dcterms:description "Ctenophore Ontology in OWL format" ; schema1:url . kgr:ctkp.docs a schema1:DocumentationProduct ; rdfs:label "Clinical Trials KP Documentation" ; dcterms:description "Translator wiki documentation for Clinical Trials KP, including source and access details." ; schema1:url . kgr:cto.owl a schema1:OntologyProduct ; rdfs:label "cto.owl" ; dcterms:description "CTO: Core Ontology of Clinical Trials in OWL format" ; schema1:url . kgr:ctrp.data a schema1:Product ; rdfs:label "CTRP Data Downloads" ; dcterms:description "Raw sensitivity data, enrichment data, and supporting information available through the NCI CTD2 Data Portal" ; schema1:url . kgr:ctrp.portal a schema1:GraphicalInterface ; rdfs:label "CTRP v2 Portal" ; dcterms:description "Interactive web portal (version 2) for exploring 481 compounds tested against 860 cancer cell lines with clustering, enrichments, and correlations" ; schema1:url . kgr:cvdo.owl a schema1:OntologyProduct ; rdfs:label "cvdo.owl" ; dcterms:description "Cardiovascular Disease Ontology in OWL format" ; schema1:url . kgr:dailymed.mapping_files a schema1:Product ; rdfs:label "DailyMed Mapping Files" ; dcterms:description "Mapping files linking DailyMed drug labels to RxNorm codes, UNII identifiers, and NDC codes for interoperability" ; schema1:url . kgr:dailymed.rss_feeds a schema1:Product ; rdfs:label "DailyMed RSS Feeds" ; dcterms:description "RSS feeds providing notifications of new and updated drug labels published on DailyMed" ; schema1:url . kgr:dailymed.spl_files a schema1:Product ; rdfs:label "DailyMed SPL Data Files" ; dcterms:description "Downloadable SPL files for all drug labels in the DailyMed database, updated daily" ; schema1:url . kgr:dailymed.web_services a schema1:ProgrammingInterface ; rdfs:label "DailyMed Web Services" ; dcterms:description "RESTful web services enabling programmatic access to DailyMed drug labeling data in Structured Product Labeling (SPL) format" ; schema1:url . kgr:dailymed.website a schema1:GraphicalInterface ; rdfs:label "DailyMed Website" ; dcterms:description "Interactive web interface providing searchable access to over 154,000 FDA-approved drug labels with advanced search, browsing by therapeutic class, and pill image viewing" ; schema1:url . kgr:darkkinasekb.compounds a schema1:Dataset ; rdfs:label "DKK Tool Compounds" ; dcterms:description "Tool compounds for dark kinases with kinome-wide selectivity profiles and NanoBRET validation" ; schema1:url . kgr:darkkinasekb.expression a schema1:Browser ; rdfs:label "DKK Expression Browser" ; dcterms:description "Interactive expression browser showing tissue-specific expression of dark kinases using GTEx RNA-seq and Human Proteome Map data with kinome-wide comparisons" ; schema1:url . kgr:darkkinasekb.github a schema1:Repository ; rdfs:label "DKK GitHub Repository" ; dcterms:description "GitHub repository containing source code for Dark Kinase Knowledgebase website" ; schema1:url . kgr:darkkinasekb.interactions a schema1:Dataset ; rdfs:label "DKK Protein Interactions" ; dcterms:description "Protein interaction networks for dark kinases from affinity purification mass spectrometry and proximity labeling experiments" ; schema1:url . kgr:darkkinasekb.portal a schema1:Portal ; rdfs:label "DKK Main Portal" ; dcterms:description "Main web portal for Dark Kinase Knowledgebase providing comprehensive data on 162 understudied kinases including tool compounds, PRM peptides, protein interactions, and expression profiles" ; schema1:url . kgr:darkkinasekb.prm a schema1:Dataset ; rdfs:label "DKK PRM Peptides" ; dcterms:description "Parallel reaction monitoring (PRM) peptides for quantitative mass spectrometry of dark kinases with standard curves and detection limits" ; schema1:url . kgr:darkkinasekb.synapse a schema1:Dataset ; rdfs:label "DKK Synapse Data Repository" ; dcterms:description "Bulk datasets and resources distributed through Synapse platform" ; schema1:url . kgr:date.archive a schema1:Product ; rdfs:label "DATE Archive ZIP" ; dcterms:description "Archived DATE ZIP package for tissue-specific drug-target-pathway analyses." ; schema1:url . kgr:dbsnp.api a schema1:ProgrammingInterface ; rdfs:label "dbSNP E-utilities API" ; dcterms:description "Programmatic access to dbSNP data via the NCBI E-utilities API" ; schema1:url . kgr:dbsnp.json a schema1:Product ; rdfs:label "dbSNP JSON Files" ; dcterms:description "JSON format files with dbSNP RefSNP data" ; schema1:url . kgr:dbsnp.site a schema1:GraphicalInterface ; rdfs:label "dbSNP Web Interface" ; dcterms:description "Web interface for searching and exploring dbSNP data" ; schema1:url . kgr:dbsnp.variation.api a schema1:ProgrammingInterface ; rdfs:label "NCBI Variation Services API" ; dcterms:description "NCBI Variation Services API for accessing and manipulating variant data" ; schema1:url . kgr:dc.classes a schema1:DocumentationProduct ; rdfs:label "Dublin Core Classes" ; dcterms:description "Documentation for Dublin Core classes including Agent, BibliographicResource, FileFormat, Frequency, Jurisdiction, LicenseDocument, LinguisticSystem, Location, MediaType, and others." ; schema1:url . kgr:dc.dcmitype_rdf a schema1:DataModelProduct ; rdfs:label "DCMI Type Vocabulary RDF Schema" ; dcterms:description "RDF schema for the DCMI Type Vocabulary, defining classes for basic types (Collection, Dataset, Event, Image, InteractiveResource, MovingImage, PhysicalObject, Service, Software, Sound, StillImage, Text)." ; schema1:url dcmitype: . kgr:dc.elements_rdf a schema1:DataModelProduct ; rdfs:label "Dublin Core Elements RDF Schema" ; dcterms:description "RDF schema for Dublin Core elements in the /elements/1.1/ namespace." ; schema1:url dc: . kgr:dc.elements_spec a schema1:DocumentationProduct ; rdfs:label "Dublin Core Elements 1.1 Specification" ; dcterms:description "Documentation for the fifteen core Dublin Core elements in the /elements/1.1/ namespace (contributor, coverage, creator, date, description, format, identifier, language, publisher, relation, rights, source, subject, title, type)." ; schema1:url . kgr:dc.encoding_schemes a schema1:DocumentationProduct ; rdfs:label "Dublin Core Encoding Schemes" ; dcterms:description "Documentation for vocabulary encoding schemes (DCMIType, DDC, IMT, LCC, LCSH, MESH, NLM, TGN, UDC) and syntax encoding schemes (Box, ISO3166, ISO639-2, ISO639-3, Period, Point, RFC standards, URI, W3CDTF)." ; schema1:url . kgr:dc.terms_rdf a schema1:DataModelProduct ; rdfs:label "Dublin Core Terms RDF Schema" ; dcterms:description "RDF schema for Dublin Core terms in the /terms/ namespace." ; schema1:url dcterms: . kgr:dc.terms_spec a schema1:DocumentationProduct ; rdfs:label "DCMI Metadata Terms Specification" ; dcterms:description "The DCMI Metadata Terms specification document, providing comprehensive documentation of all properties in the /terms/ namespace including abstract, accessRights, contributor, coverage, creator, date, description, format, identifier, language, publisher, relation, rights, subject, title, type, and many others." ; schema1:url . kgr:ddanat.obo a schema1:OntologyProduct ; rdfs:label "ddanat.obo" ; dcterms:description "Dictyostelium discoideum anatomy in OBO format" ; schema1:url . kgr:ddanat.owl a schema1:OntologyProduct ; rdfs:label "ddanat.owl" ; dcterms:description "Dictyostelium discoideum anatomy in OWL format" ; schema1:url . kgr:ddinter.ddi_annotations a schema1:DataProduct ; rdfs:label "DDInter Drug-Drug Interaction Annotations" ; dcterms:description "Comprehensive drug-drug interaction annotations with mechanism descriptions, risk levels, management strategies, and alternative medication recommendations for clinical decision support." ; schema1:url . kgr:ddpheno.obo a schema1:OntologyProduct ; rdfs:label "ddpheno.obo" ; dcterms:description "Dictyostelium discoideum phenotype ontology in OBO format" ; schema1:url . kgr:ddpheno.owl a schema1:OntologyProduct ; rdfs:label "ddpheno.owl" ; dcterms:description "Dictyostelium discoideum phenotype ontology in OWL format" ; schema1:url . kgr:depmap.cell_line_info a schema1:Product ; rdfs:label "DepMap Cell Line Information" ; dcterms:description "Comprehensive metadata and annotations for all DepMap cell lines" ; schema1:url . kgr:depmap.cell_line_selector a schema1:GraphicalInterface ; rdfs:label "DepMap Cell Line Selector" ; dcterms:description "Tool for exploring and selecting cancer cell lines based on various criteria" ; schema1:url . kgr:depmap.context_explorer a schema1:GraphicalInterface ; rdfs:label "DepMap Context Explorer" ; dcterms:description "Context Explorer tool for exploring enriched genetic dependencies and compound sensitivities across lineage and subtype contexts" ; schema1:url . kgr:depmap.copy_number a schema1:Product ; rdfs:label "DepMap Copy Number Data" ; dcterms:description "Copy number variation data for DepMap cell lines" ; schema1:url . kgr:depmap.crispr_gene_effects a schema1:Product ; rdfs:label "DepMap CRISPR Gene Effects (Chronos)" ; dcterms:description "CRISPR-Cas9 knockout screening data processed with Chronos algorithm to identify gene dependencies" ; schema1:url . kgr:depmap.data_explorer a schema1:GraphicalInterface ; rdfs:label "DepMap Data Explorer" ; dcterms:description "Interactive tool for exploring relationships across DepMap datasets and cell lines" ; schema1:url . kgr:depmap.downloads a schema1:Product ; rdfs:label "DepMap Data Downloads" ; dcterms:description "Complete collection of DepMap datasets available for download including CRISPR screens, drug screens, and omics data" ; schema1:url . kgr:depmap.drug_sensitivity a schema1:Product ; rdfs:label "DepMap Drug Sensitivity Data" ; dcterms:description "Drug screening data from various platforms including GDSC, PRISM, and CTD2" ; schema1:url . kgr:depmap.expression_data a schema1:Product ; rdfs:label "DepMap Expression Data" ; dcterms:description "Gene expression data (RNA-seq) for DepMap cell lines" ; schema1:url . kgr:depmap.metabolomics a schema1:Product ; rdfs:label "DepMap Metabolomics Data" ; dcterms:description "Metabolomics data for DepMap cell lines" ; schema1:url . kgr:depmap.mutations a schema1:Product ; rdfs:label "DepMap Mutation Data" ; dcterms:description "Mutation data for DepMap cell lines" ; schema1:url . kgr:depmap.portal a schema1:GraphicalInterface ; rdfs:label "DepMap Portal" ; dcterms:description "Web portal for exploring cancer dependencies, cell line data, and biomarkers" ; schema1:url . kgr:depmap.proteomics a schema1:Product ; rdfs:label "DepMap Proteomics Data" ; dcterms:description "Proteomics data for DepMap cell lines" ; schema1:url . kgr:depmap.target_discovery a schema1:GraphicalInterface ; rdfs:label "DepMap Target Discovery" ; dcterms:description "Target Discovery App for identifying selective and predictable gene dependencies" ; schema1:url . kgr:dgidb.api a schema1:ProgrammingInterface ; rdfs:label "DGIdb API" ; dcterms:description "API for programmatically accessing the Drug Gene Interaction Database" ; schema1:url . kgr:dictybase.annotations.gff a schema1:Product ; rdfs:label "dictyBase Genome Annotations" ; dcterms:description "Genome assembly and annotations in GFF format" ; schema1:url . kgr:dictybase.genome.browser a schema1:GraphicalInterface ; rdfs:label "dictyBase Genome Browser" ; dcterms:description "Web-based browser for exploring Dictyostelium genomes and annotations" ; schema1:url . kgr:dictybase.genome.fasta a schema1:Product ; rdfs:label "dictyBase Genome Sequences" ; dcterms:description "Genome sequence data in FASTA format" ; schema1:url . kgr:dictybase.graphql.api a schema1:ProgrammingInterface ; rdfs:label "dictyBase GraphQL API" ; dcterms:description "GraphQL API for programmatic access to dictyBase data" ; schema1:url . kgr:dictybase.proteins.fasta a schema1:Product ; rdfs:label "dictyBase Protein Sequences" ; dcterms:description "Protein sequence data in FASTA format" ; schema1:url . kgr:dideo.owl a schema1:OntologyProduct ; rdfs:label "dideo.owl" ; dcterms:description "Drug-drug Interaction and Drug-drug Interaction Evidence Ontology in OWL format" ; schema1:url . kgr:dinto.owl a schema1:OntologyProduct ; rdfs:label "dinto.owl" ; dcterms:description "The Drug-Drug Interactions Ontology in OWL format" ; schema1:url . kgr:dip.downloads a schema1:Product ; rdfs:label "DIP Data Downloads" ; dcterms:description "Complete DIP dataset and specialized subsets available for download in PSI-MI formats (registration required)" ; schema1:url . kgr:dip.search a schema1:GraphicalInterface ; rdfs:label "DIP Search Interface" ; dcterms:description "Web-based search interface for exploring protein-protein interactions by journal article, experimental evidence, or protein identifiers" ; schema1:url . kgr:disdriv.owl a schema1:OntologyProduct ; rdfs:label "disdriv.owl" ; dcterms:description "Disease Drivers Ontology in OWL format" ; schema1:url . kgr:diseases.dictionary a schema1:Product ; rdfs:label "DISEASES Dictionary" ; dcterms:description "Dictionary of human gene and disease names for the DISEASES tagger" ; schema1:url . kgr:diseases.experiments-filtered a schema1:Product ; rdfs:label "Experiments Channel (Filtered)" ; dcterms:description "Disease-gene associations from experimental data channel including cancer mutations and GWAS with source scores and confidence scores (filtered non-redundant)" ; schema1:url . kgr:diseases.experiments-full a schema1:Product ; rdfs:label "Experiments Channel (Full)" ; dcterms:description "Disease-gene associations from experimental data channel including cancer mutations and GWAS with source scores and confidence scores (full dataset)" ; schema1:url . kgr:diseases.integrated-full a schema1:Product ; rdfs:label "Integrated Channel (Full)" ; dcterms:description "Experimental integrated channel combining evidence from all sources (full dataset)" ; schema1:url . kgr:diseases.knowledge-filtered a schema1:Product ; rdfs:label "Knowledge Channel (Filtered)" ; dcterms:description "Disease-gene associations from manually curated knowledge channel with evidence types and confidence scores (filtered non-redundant)" ; schema1:url . kgr:diseases.knowledge-full a schema1:Product ; rdfs:label "Knowledge Channel (Full)" ; dcterms:description "Disease-gene associations from manually curated knowledge channel with evidence types and confidence scores (full dataset)" ; schema1:url . kgr:diseases.portal a schema1:GraphicalInterface ; rdfs:label "DISEASES Web Search" ; dcterms:description "Web search interface for querying human genes and diseases to view integrated evidence from multiple channels" ; schema1:url . kgr:diseases.textmining-filtered a schema1:Product ; rdfs:label "Text Mining Channel (Filtered)" ; dcterms:description "Disease-gene associations from text mining channel with z-scores and confidence scores (filtered non-redundant)" ; schema1:url . kgr:diseases.textmining-full a schema1:Product ; rdfs:label "Text Mining Channel (Full)" ; dcterms:description "Disease-gene associations from text mining channel with z-scores and confidence scores (full dataset)" ; schema1:url . kgr:disgenet.api a schema1:ProgrammingInterface ; rdfs:label "DisGeNET API" ; dcterms:description "API access to DisGeNET data (requires registration and subscription)." ; schema1:url . kgr:disgenet.browser a schema1:GraphicalInterface ; rdfs:label "DisGeNET Browser" ; dcterms:description "Browser for DisGeNET data (requires registration and subscription)." ; schema1:url . kgr:disprot.api a schema1:ProgrammingInterface ; rdfs:label "DisProt API" ; dcterms:description "RESTful API for programmatic access to DisProt data" ; schema1:url . kgr:disprot.browser a schema1:GraphicalInterface ; rdfs:label "DisProt Browser" ; dcterms:description "Web interface for browsing and searching intrinsically disordered protein annotations with search filters and organism browsing" ; schema1:url . kgr:disprot.deposition a schema1:GraphicalInterface ; rdfs:label "DisProt Deposition System" ; dcterms:description "Deposition system for submitting experimental data on intrinsically disordered proteins" ; schema1:url . kgr:disprot.downloads a schema1:Product ; rdfs:label "DisProt Downloads" ; dcterms:description "Bulk download of DisProt data in multiple formats including JSON, TSV, FASTA, and GAF" ; schema1:url . kgr:disprot.idpo a schema1:OntologyProduct ; rdfs:label "IDP Ontology (IDPO)" ; dcterms:description "IDP Ontology (IDPO) for representing functional aspects of intrinsically disordered proteins" ; schema1:url . kgr:doaf.framework-publication a schema1:DocumentationProduct ; rdfs:label "DOAF Framework Publication" ; dcterms:description "PLOS ONE article describing the Disease Ontology Annotation Framework and its use for disease annotation." ; schema1:url . kgr:docm.data.sql a schema1:ProcessProduct ; rdfs:label "DoCM SQL Database" ; dcterms:description "Complete DoCM database in SQL format for local installation" ; schema1:url . kgr:docm.variants.tsv a schema1:Product ; rdfs:label "DoCM Variants TSV" ; dcterms:description "Curated cancer mutations in tab-separated values format with gene, transcript, variant, and disease information" ; schema1:url . kgr:docm.variants.vcf a schema1:Product ; rdfs:label "DoCM Variants VCF" ; dcterms:description "Curated cancer mutations in Variant Call Format (VCF)" ; schema1:url . kgr:doco.owl a schema1:OntologyProduct ; rdfs:label "DOCO Ontology (OWL)" ; dcterms:description "DOCO ontology in OWL/RDF format" ; schema1:url . kgr:doid.obo a schema1:OntologyProduct ; rdfs:label "Disease Ontology, OBO format. This file omits the equivalent axioms." ; dcterms:description "Disease Ontology, OBO format. This file omits the equivalent axioms." ; schema1:url . kgr:doid.owl a schema1:OntologyProduct ; rdfs:label "Disease Ontology, OWL format. This file contains DO's is_a asserted hierarchy plus equivalent axioms to other OBO Foundry ontologies." ; dcterms:description "Disease Ontology, OWL format. This file contains DO's is_a asserted hierarchy plus equivalent axioms to other OBO Foundry ontologies." ; schema1:url . kgr:dorothea.docs a schema1:DocumentationProduct ; rdfs:label "DoRothEA Documentation" ; dcterms:description "Project documentation, usage examples, and methodological notes" ; schema1:url . kgr:dorothea.graph a schema1:GraphProduct ; rdfs:label "DoRothEA Regulon Graph" ; dcterms:description "Core TF–target regulon knowledge graph (multi-species) with confidence levels (A–E)" ; schema1:url . kgr:dorothea.r-package a schema1:ProcessProduct ; rdfs:label "DoRothEA R Package" ; dcterms:description "R package containing regulon data and helper functions for TF activity inference" ; schema1:url . kgr:dpo.json a schema1:OntologyProduct ; rdfs:label "dpo.json" ; dcterms:description "Drosophila Phenotype Ontology in JSON format" ; schema1:url . kgr:dpo.obo a schema1:OntologyProduct ; rdfs:label "dpo.obo" ; dcterms:description "Drosophila Phenotype Ontology in OBO format" ; schema1:url . kgr:dpo.owl a schema1:OntologyProduct ; rdfs:label "dpo.owl" ; dcterms:description "Drosophila Phenotype Ontology in OWL format" ; schema1:url . kgr:dreamkg.sparql a schema1:ProgrammingInterface ; rdfs:label "DREAM-KG SPARQL" ; dcterms:description "SPARQL endpoint for DREAM-KG" ; schema1:url . kgr:drkg.graph a schema1:GraphProduct ; rdfs:label "DRKG graph" ; dcterms:description "DRKG graph files, including a TSV of triples, embeddings, ID mappings, and a glossary of relation types." ; schema1:url . kgr:dron.owl a schema1:OntologyProduct ; rdfs:label "dron.owl" ; dcterms:description "The Drug Ontology in OWL format" ; schema1:url . kgr:drug-approvals-kp.code a schema1:ProcessProduct ; rdfs:label "Drug Approvals KP code" ; dcterms:description "Code for the Drug Approvals KP" ; schema1:url . kgr:drugbank.academic a schema1:DataModelProduct ; rdfs:label "DrugBank Academic Downloads" ; dcterms:description "Academic access to DrugBank database dumps in XML and other formats" ; schema1:url . kgr:drugbank.clinical.api a schema1:ProgrammingInterface ; rdfs:label "DrugBank Clinical API" ; dcterms:description "Clinical API for integrating DrugBank data into healthcare applications" ; schema1:url . kgr:drugbank.web a schema1:GraphicalInterface ; rdfs:label "DrugBank Online" ; dcterms:description "Web interface for browsing and searching the DrugBank database" ; schema1:url . kgr:drugcentral.data a schema1:Product ; rdfs:label "DrugCentral Database dump" ; dcterms:description "PostgreSQL (v14.5) database dump of all information in DrugCentral." ; schema1:url . kgr:drugmechdb.web a schema1:GraphicalInterface ; rdfs:label "DrugMechDB Website" ; dcterms:description "Web interface for exploring curated DrugMechDB paths by drug and disease." ; schema1:url . kgr:drugrephub.drug-info.tsv a schema1:Product ; rdfs:label "Drug Repurposing Hub Drug Information TSV" ; dcterms:description "Latest drug-level annotations including compound names, clinical phase, mechanism of action, and protein targets (listed as version 2025-08-19 on the site)." ; schema1:url . kgr:drugrephub.sample-info.tsv a schema1:Product ; rdfs:label "Drug Repurposing Hub Sample Information TSV" ; dcterms:description "Latest physical sample-level metadata including Broad sample IDs, vendor catalog numbers, SMILES, InChIKey, and PubChem IDs (listed as version 2025-08-19 on the site)." ; schema1:url . kgr:dsstox.api a schema1:ProgrammingInterface ; rdfs:label "CompTox API" ; dcterms:description "Public API for programmatic access to DSSTox data" ; schema1:url . kgr:dsstox.complete a schema1:Product ; rdfs:label "DSSTox Complete Database" ; dcterms:description "The complete DSSTox database containing over 1.2 million chemical substances with identifiers and structures" ; schema1:url . kgr:dsstox.dashboard a schema1:GraphicalInterface ; rdfs:label "CompTox Chemicals Dashboard" ; dcterms:description "The CompTox Chemicals Dashboard provides access to the DSSTox database through a web interface" ; schema1:url . kgr:dsstox.description a schema1:DocumentationProduct ; rdfs:label "DSSToxDB Description" ; dcterms:description "Documentation for the DSSTox database" ; schema1:url . kgr:dsstoxdb.api a schema1:ProgrammingInterface ; rdfs:label "EPA CompTox API" ; dcterms:description "Public API providing programmatic access to DSSTox chemical data and computational toxicology information" ; schema1:url . kgr:dsstoxdb.dashboard a schema1:GraphicalInterface ; rdfs:label "CompTox Chemicals Dashboard" ; dcterms:description "Web-based interface for searching over 1.2 million chemicals with integrated toxicity, bioactivity, and exposure data" ; schema1:url . kgr:dsstoxdb.downloads a schema1:MappingProduct ; rdfs:label "DSSTox Data Downloads" ; dcterms:description "Downloadable Excel and CSV files containing DSSTox identifiers mapped to CAS numbers, InChIKeys, SMILES, molecular formulas, and other chemical identifiers for over 1.2 million substances" ; schema1:url . kgr:duo.owl a schema1:OntologyProduct ; rdfs:label "duo.owl" ; dcterms:description "Data Use Ontology in OWL format" ; schema1:url . kgr:ebrains.api.core a schema1:ProgrammingInterface ; rdfs:label "EBRAINS KG Core API" ; dcterms:description "Interface for accessing the EBRAINS KG (also known as the MarmotGraph API)" ; schema1:url . kgr:ebrains.stats a schema1:GraphicalInterface ; rdfs:label "KG Statistics" ; dcterms:description "A visualization of the contents of the EBRAINS knowledge graph." ; schema1:url . kgr:ec.database a schema1:GraphicalInterface ; rdfs:label "Enzyme Commission Official Database" ; dcterms:description "Official Enzyme Commission nomenclature and EC number database" ; schema1:url . kgr:ecao.obo a schema1:OntologyProduct ; rdfs:label "ecao.obo" ; dcterms:description "The Echinoderm Anatomy and Development Ontology in OBO format" ; schema1:url . kgr:ecao.owl a schema1:OntologyProduct ; rdfs:label "ecao.owl" ; dcterms:description "The Echinoderm Anatomy and Development Ontology in OWL format" ; schema1:url . kgr:ecid.bloodexposome.data a schema1:Product ; rdfs:label "Blood Exposome Database" ; dcterms:description "Catalogues chemicals expected and detected in human blood specimens." ; schema1:url . kgr:ecid.ccdb.site a schema1:GraphicalInterface ; rdfs:label "CCDB" ; dcterms:description "Interface for the Chemical Correlation Database for exploring curated inter-chemical correlations" ; schema1:url . kgr:ecid.compound.lists a schema1:Product ; rdfs:label "ECID Compound Lists" ; dcterms:description "Compound lists from 73 untargeted datasets with 3,329 unique 2D structures." ; schema1:url . kgr:ecid.dataset.list a schema1:Product ; rdfs:label "ECID Dataset List" ; dcterms:description "Selected datasets (n=289) for computing and curating inter-chemical correlations." ; schema1:url . kgr:ecid.echo.analyte.list a schema1:Product ; rdfs:label "ECHO Analyte List" ; dcterms:description "Chemical analytes reported for the ECHO cohort measured by targeted assays." ; schema1:url . kgr:ecid.edir.site a schema1:GraphicalInterface ; rdfs:label "EDIR" ; dcterms:description "Interface for Exposome Data Interpretation Resource for interpreting inter-chemical correlations" ; schema1:url . kgr:ecid.hhear.analyte.list a schema1:Product ; rdfs:label "HHEAR Analyte List" ; dcterms:description "Analytes measured by targeted assays for the NIEHS HHEAR program." ; schema1:url . kgr:ecid.metabolomics.data.dictionary a schema1:Product ; rdfs:label "Metabolomics Data Dictionary" ; dcterms:description "Metabolite and chemical names reported by Metabolon Inc. in PMC articles." ; schema1:url . kgr:ecid.metabolomics.workbench.dictionary a schema1:Product ; rdfs:label "Metabolomics WorkBench Compound Dictionary" ; dcterms:description "mwTAB files processed to yield curated compound names and identifiers." ; schema1:url . kgr:ecid.nhanes.analyte.list a schema1:Product ; rdfs:label "NHANES Analyte List" ; dcterms:description "Chemical analytes reported by the NHANES biomonitoring survey." ; schema1:url . kgr:eco-kg.api a schema1:ProgrammingInterface ; rdfs:label "eco-KG API" ; dcterms:description "API for accessing eco-KG data" ; schema1:url . kgr:eco-kg.graph a schema1:GraphProduct ; rdfs:label "eco-KG Graph" ; dcterms:description "Knowledge graph containing plant traits data from Planteome and EOL TraitBank" ; schema1:url . kgr:eco.obo a schema1:OntologyProduct ; rdfs:label "eco.obo" ; dcterms:description "Evidence and Conclusion Ontology in OBO format" ; schema1:url . kgr:eco.owl a schema1:OntologyProduct ; rdfs:label "eco.owl" ; dcterms:description "Evidence and Conclusion Ontology in OWL format" ; schema1:url . kgr:ecocore.obo a schema1:OntologyProduct ; rdfs:label "ecocore.obo" ; dcterms:description "An ontology of core ecological entities in OBO format" ; schema1:url . kgr:ecocore.owl a schema1:OntologyProduct ; rdfs:label "ecocore.owl" ; dcterms:description "An ontology of core ecological entities in OWL format" ; schema1:url . kgr:ecocyc.api a schema1:ProgrammingInterface ; rdfs:label "EcoCyc Web Services" ; dcterms:description "Web services and APIs for programmatic access to EcoCyc data" ; schema1:url . kgr:ecocyc.metabolic_model a schema1:ProcessProduct ; rdfs:label "EcoCyc Metabolic Model" ; dcterms:description "Metabolic model for E. coli K-12 derived from EcoCyc" ; schema1:url . kgr:ecocyc.web a schema1:GraphicalInterface ; rdfs:label "EcoCyc Web Interface" ; dcterms:description "Web interface for EcoCyc database" ; schema1:url . kgr:ecosim.model.owl a schema1:Product ; rdfs:label "ecosim OWL release" ; dcterms:description "OWL release of ecosim" . kgr:ecto.ecto-base.json a schema1:OntologyProduct ; rdfs:label "ecto.ecto-base.json" ; dcterms:description "Environmental conditions, treatments and exposures ontology in JSON format" ; schema1:url . kgr:ecto.ecto-base.obo a schema1:OntologyProduct ; rdfs:label "ecto.ecto-base.obo" ; dcterms:description "Environmental conditions, treatments and exposures ontology in OBO format" ; schema1:url . kgr:ecto.ecto-base.owl a schema1:OntologyProduct ; rdfs:label "ecto.ecto-base.owl" ; dcterms:description "Environmental conditions, treatments and exposures ontology in OWL format" ; schema1:url . kgr:ecto.json a schema1:OntologyProduct ; rdfs:label "ecto.json" ; dcterms:description "Environmental conditions, treatments and exposures ontology in JSON format" ; schema1:url . kgr:ecto.obo a schema1:OntologyProduct ; rdfs:label "ecto.obo" ; dcterms:description "Environmental conditions, treatments and exposures ontology in OBO format" ; schema1:url . kgr:ecto.owl a schema1:OntologyProduct ; rdfs:label "ecto.owl" ; dcterms:description "Environmental conditions, treatments and exposures ontology in OWL format" ; schema1:url . kgr:efo.ols a schema1:GraphicalInterface ; rdfs:label "EFO in OLS" ; dcterms:description "Browse EFO with EBI's Ontology Lookup Service (OLS)" ; schema1:url . kgr:eggnog.download a schema1:Product ; rdfs:label "eggNOG Downloads" ; dcterms:description "Download interface for eggNOG annotation and orthology data releases." ; schema1:url . kgr:eggnog.download.e7.clu2ogs a schema1:Product ; rdfs:label "eggNOG 7 Protein Family to OGs" ; dcterms:description "Table listing orthologous groups per protein family." ; schema1:url . kgr:eggnog.download.e7.og-fasta-sequences a schema1:Product ; rdfs:label "eggNOG 7 OG FASTA Sequences" ; dcterms:description "Tar archive containing orthologous group FASTA sequence files." ; schema1:url . kgr:eggnog.download.e7.og-info-kegg-go a schema1:Product ; rdfs:label "eggNOG 7 OG Info (KEGG/GO)" ; dcterms:description "Orthologous group information table including KEGG and GO annotations." ; schema1:url . kgr:eggnog.download.e7.protein-families a schema1:Product ; rdfs:label "eggNOG 7 Protein Families" ; dcterms:description "Protein family information table." ; schema1:url . kgr:eggnog.download.e7.proteins a schema1:Product ; rdfs:label "eggNOG 7 Proteins" ; dcterms:description "All protein sequences covered in eggNOG 7." ; schema1:url . kgr:eggnog.download.e7.taxid-info a schema1:Product ; rdfs:label "eggNOG 7 Taxonomic Information" ; dcterms:description "Taxonomic information table for genomes included in eggNOG 7." ; schema1:url . kgr:eggnog.download.e7.trees a schema1:Product ; rdfs:label "eggNOG 7 Protein Family Trees" ; dcterms:description "Protein family phylogenetic trees table." ; schema1:url . kgr:eggnog.portal a schema1:GraphicalInterface ; rdfs:label "eggNOG Portal" ; dcterms:description "Main web interface for browsing orthologous groups and functional annotations." ; schema1:url . kgr:ehdaa2.obo a schema1:OntologyProduct ; rdfs:label "ehdaa2.obo" ; dcterms:description "Human developmental anatomy, abstract in OBO format" ; schema1:url . kgr:ehdaa2.owl a schema1:OntologyProduct ; rdfs:label "ehdaa2.owl" ; dcterms:description "Human developmental anatomy, abstract in OWL format" ; schema1:url . kgr:emap.owl a schema1:OntologyProduct ; rdfs:label "emap.owl" ; dcterms:description "Mouse gross anatomy and development, timed in OWL format" ; schema1:url . kgr:emapa.obo a schema1:OntologyProduct ; rdfs:label "emapa.obo" ; dcterms:description "Mouse Developmental Anatomy Ontology in OBO format" ; schema1:url . kgr:emapa.owl a schema1:OntologyProduct ; rdfs:label "emapa.owl" ; dcterms:description "Mouse Developmental Anatomy Ontology in OWL format" ; schema1:url . kgr:embiology.web a schema1:GraphicalInterface ; rdfs:label "EmBiology Web Interface" ; dcterms:description "Web interface for exploring biological relationships in EmBiology" ; schema1:url . kgr:emi.ttl a schema1:OntologyProduct ; rdfs:label "EMI Ontology TTL" ; dcterms:description "Canonical EMI ontology release (TTL)" ; schema1:url . kgr:ena.api a schema1:ProgrammingInterface ; rdfs:label "ENA REST API" ; dcterms:description "REST API for programmatic access to ENA data, including sequence retrieval and metadata queries." ; schema1:url . kgr:ena.browser a schema1:GraphicalInterface ; rdfs:label "ENA Browser" ; dcterms:description "Web portal for searching, browsing, and viewing nucleotide sequence data and metadata." ; schema1:url . kgr:ena.datahubs a schema1:GraphicalInterface ; rdfs:label "ENA Data Hubs Portal" ; dcterms:description "Interface for setting up and managing pre-release and public Data Hubs for pathogen and other sequence data." ; schema1:url . kgr:ena.docs a schema1:DocumentationProduct ; rdfs:label "ENA Documentation" ; dcterms:description "Documentation and help resources for ENA, including submission guidelines and API documentation." ; schema1:url . kgr:ena.ftp a schema1:Product ; rdfs:label "ENA FTP Archive" ; dcterms:description "FTP archive with nucleotide sequences, assemblies, and associated data files." ; schema1:url . kgr:ena.training a schema1:DocumentationProduct ; rdfs:label "ENA Training" ; dcterms:description "Training resources for ENA users, including tutorials and webinars." ; schema1:url . kgr:enrichr-kg.api a schema1:ProgrammingInterface ; rdfs:label "Enrichr-KG API" ; dcterms:description "API endpoints for programmatic access to Enrichr-KG graph data and enrichment analysis" ; schema1:url . kgr:enrichr-kg.graph a schema1:GraphProduct ; rdfs:label "Enrichr-KG Neo4j Database" ; dcterms:description "Neo4j graph database containing integrated gene set enrichment libraries with genes, terms, pathways, and functional annotations" . kgr:enrichr-kg.portal a schema1:GraphicalInterface ; rdfs:label "Enrichr-KG Explorer" ; dcterms:description "Interactive web interface for exploring the Enrichr-KG knowledge graph with single and two-term search capabilities" ; schema1:url . kgr:ensembl.api.perl a schema1:ProgrammingInterface ; rdfs:label "Ensembl Perl API" ; dcterms:description "Programmatic access to all Ensembl data using Perl scripts." ; schema1:url . kgr:ensembl.api.rest a schema1:ProgrammingInterface ; rdfs:label "Ensembl REST API" ; dcterms:description "RESTful API that allows access to Ensembl data using various programming languages." ; schema1:url . kgr:ensembl.biomart a schema1:GraphicalInterface ; rdfs:label "BioMart" ; dcterms:description "A data mining tool that allows extraction of data without programming knowledge or understanding of the underlying database structure." ; schema1:url . kgr:ensembl.blast a schema1:ProcessProduct ; rdfs:label "BLAST/BLAT" ; dcterms:description "Tool to search Ensembl genomes for DNA or protein sequences." ; schema1:url . kgr:ensembl.browser a schema1:GraphicalInterface ; rdfs:label "Ensembl Genome Browser" ; dcterms:description "A web-based platform for browsing and analyzing vertebrate genomes, including gene annotations, comparative genomics, and variation data." ; schema1:url . kgr:ensembl.vep a schema1:ProcessProduct ; rdfs:label "Variant Effect Predictor (VEP)" ; dcterms:description "A tool to analyze variants and predict the functional consequences of known and unknown variants." ; schema1:url . kgr:entrez.edirect a schema1:ProgrammingInterface ; rdfs:label "Entrez Direct (EDirect)" ; dcterms:description "Entrez Direct command-line tools for Unix systems" ; schema1:url . kgr:entrez.eutils a schema1:ProgrammingInterface ; rdfs:label "Entrez E-utilities" ; dcterms:description "E-utilities API for programmatic access to Entrez databases" ; schema1:url . kgr:entrez.web a schema1:GraphicalInterface ; rdfs:label "Entrez Web Interface" ; dcterms:description "Web-based search interface for Entrez databases" ; schema1:url . kgr:envo.json a schema1:OntologyProduct ; rdfs:label "ENVO in obographs JSON format" ; dcterms:description "ENVO in obographs JSON format" ; schema1:url . kgr:envo.obo a schema1:OntologyProduct ; rdfs:label "ENVO in OBO Format. May be lossy" ; dcterms:description "ENVO in OBO Format. May be lossy" ; schema1:url . kgr:envo.owl a schema1:OntologyProduct ; rdfs:label "main ENVO OWL release" ; dcterms:description "main ENVO OWL release" ; schema1:url . kgr:envo.subsets.EnvO-Lite-GSC.obo a schema1:OntologyProduct ; rdfs:label "GSC Lite subset of ENVO" ; dcterms:description "GSC Lite subset of ENVO" ; schema1:url . kgr:envo.subsets.envo-basic.obo a schema1:OntologyProduct ; rdfs:label "OBO-Basic edition of ENVO" ; dcterms:description "OBO-Basic edition of ENVO" ; schema1:url . kgr:envo.subsets.envoEmpo.owl a schema1:OntologyProduct ; rdfs:label "Earth Microbiome Project subset" ; dcterms:description "Earth Microbiome Project subset" ; schema1:url . kgr:eo.obo a schema1:OntologyProduct ; rdfs:label "eo.obo" ; dcterms:description "Plant Environment Ontology in OBO format" ; schema1:url . kgr:eo.owl a schema1:OntologyProduct ; rdfs:label "eo.owl" ; dcterms:description "Plant Environment Ontology in OWL format" ; schema1:url . kgr:eol-traitbank.api a schema1:ProgrammingInterface ; rdfs:label "EOL API" ; dcterms:description "RESTful API endpoints for taxonomy, media, and text data access from Encyclopedia of Life" ; schema1:url . kgr:eol-traitbank.bulk-csv a schema1:Product ; rdfs:label "TraitBank Bulk Data Export" ; dcterms:description "Complete TraitBank bulk data export containing all 11 million+ trait records in CSV format with measurement details and source attribution" ; schema1:url . kgr:eol-traitbank.cypher a schema1:ProgrammingInterface ; rdfs:label "TraitBank Cypher Query Interface" ; dcterms:description "Neo4j Cypher query interface providing programmatic access to structured trait data, requiring authentication via EOL account" ; schema1:url . kgr:eol-traitbank.docs a schema1:DocumentationProduct ; rdfs:label "TraitBank Documentation" ; dcterms:description "Comprehensive documentation covering TraitBank data structure, API usage, authentication methods, and data formats" ; schema1:url . kgr:eol-traitbank.reconciliation a schema1:ProgrammingInterface ; rdfs:label "EOL Reconciliation API" ; dcterms:description "EOL Reconciliation Service API for resolving taxon names to EOL taxon IDs using OpenRefine-compatible reconciliation protocol" ; schema1:url . kgr:eol-traitbank.web a schema1:GraphicalInterface ; rdfs:label "TraitBank Web Portal" ; dcterms:description "Interactive web interface for searching, browsing, and discovering organism trait data across all taxa with filtering by taxonomic group and attribute type" ; schema1:url . kgr:epigraphdb.api a schema1:ProgrammingInterface ; rdfs:label "EpiGraphDB REST API" ; dcterms:description "Public REST API for programmatic access to EpiGraphDB graph entities, relationships, causal estimates, and metadata" ; schema1:url . kgr:epigraphdb.docs a schema1:DocumentationProduct ; rdfs:label "EpiGraphDB Documentation" ; dcterms:description "Documentation hub containing conceptual overviews, API endpoint references, data integration details, metrics, and research study links" ; schema1:url . kgr:epigraphdb.examples a schema1:DocumentationProduct ; rdfs:label "EpiGraphDB Example Notebooks" ; dcterms:description "Example notebooks demonstrating EpiGraphDB use cases, including causal inference, pleiotropy assessment, drug target identification, literature triangulation, and metadata queries" ; schema1:url . kgr:epigraphdb.rpackage a schema1:ProgrammingInterface ; rdfs:label "epigraphdb R Package" ; dcterms:description "R client package providing higher-level access to EpiGraphDB API endpoints and analysis workflows" ; schema1:url . kgr:epigraphdb.web a schema1:GraphicalInterface ; rdfs:label "EpiGraphDB Web UI" ; dcterms:description "Web application for interactive exploration of EpiGraphDB including search, causal estimates, pathways, literature evidence, ontology, and visualization gallery" ; schema1:url . kgr:epio.EPIO_merged.owl a schema1:OntologyProduct ; rdfs:label "epio.EPIO_merged.owl" ; dcterms:description "Epilepsy Ontology in OWL format" ; schema1:url . kgr:epio.owl a schema1:OntologyProduct ; rdfs:label "epio.owl" ; dcterms:description "Epilepsy Ontology in OWL format" ; schema1:url . kgr:epo.owl a schema1:OntologyProduct ; rdfs:label "epo.owl" ; dcterms:description "Epidemiology Ontology in OWL format" ; schema1:url . kgr:epsd.browse a schema1:Browser ; rdfs:label "EPSD Browse by Species" ; dcterms:description "Browse phosphorylation sites by species across 223 eukaryotes including 95 animals, 20 protists, 61 plants, and 48 fungi" ; schema1:url . kgr:epsd.download a schema1:Download ; rdfs:label "EPSD Data Download" ; dcterms:description "Download page for complete phosphorylation site datasets and annotation data from EPSD 2.0" ; schema1:url . kgr:epsd.portal a schema1:Portal ; rdfs:label "EPSD 2.0 Portal" ; dcterms:description "Main web portal for EPSD 2.0 providing search, browse, and visualization of protein phosphorylation sites across 223 eukaryotic species with functional annotations" ; schema1:url . kgr:epsd.search a schema1:Search ; rdfs:label "EPSD Advanced Search" ; dcterms:description "Advanced search interface supporting substrate search, peptide search, batch search, BLAST search, and multi-condition queries" ; schema1:url . kgr:eqtlgen.allele_frequencies a schema1:Product ; rdfs:label "Allele Frequencies" ; dcterms:description "Allele frequencies for all tested SNPs based on 26,609 eQTLGen samples (excluding FHS), including combined allele counts and minor allele frequencies." ; schema1:url . kgr:eqtlgen.cis_eqtl_full a schema1:Product ; rdfs:label "Full cis-eQTL Summary Statistics" ; dcterms:description "Full cis-eQTL summary statistics from Phase I meta-analysis at the probe level, with cohort information removed and Bonferroni-adjusted p-values added." ; schema1:url . kgr:eqtlgen.cis_eqtl_significant a schema1:Product ; rdfs:label "Significant cis-eQTLs" ; dcterms:description "Significant cis-eQTL associations from Phase I meta-analysis (FDR < 0.05, tested in at least 2 cohorts), including Bonferroni-adjusted p-values." ; schema1:url . kgr:eqtlgen.cis_eqtl_smr a schema1:Product ; rdfs:label "SMR-formatted cis-eQTLs" ; dcterms:description "cis-eQTL results formatted for Summary-data-based Mendelian Randomization (SMR) analysis, enabling inference of putatively causal genes." ; schema1:url . kgr:eqtlgen.phase1_browser a schema1:GraphicalInterface ; rdfs:label "eQTLGen Phase I Browser" ; dcterms:description "Web interface for browsing significant cis-eQTL, trans-eQTL, and eQTS results from Phase I, with SMR-prioritised gene lists for various traits." ; schema1:url . kgr:eqtlgen.phase2_cookbook a schema1:DocumentationProduct ; rdfs:label "eQTLGen Phase II Cookbook" ; dcterms:description "Analysis cookbook and documentation for eQTLGen Phase II genome-wide eQTL meta-analysis in blood." ; schema1:url . kgr:eqtlgen.sc_website a schema1:GraphicalInterface ; rdfs:label "Single-cell eQTLGen Website" ; dcterms:description "Website for the single-cell eQTLGen project, providing resources and publications for single-cell eQTL analysis." ; schema1:url . kgr:eqtlgen.trans_eqtl_full a schema1:Product ; rdfs:label "Full trans-eQTL Summary Statistics" ; dcterms:description "Full trans-eQTL summary statistics from Phase I meta-analysis for ~10,000 known genetic risk variants, with cohort information removed and Bonferroni-adjusted p-values added." ; schema1:url . kgr:eqtlgen.trans_eqtl_significant a schema1:Product ; rdfs:label "Significant trans-eQTLs" ; dcterms:description "Significant trans-eQTL associations from Phase I meta-analysis for ~10,000 known genetic risk variants (FDR < 0.05), including Bonferroni-adjusted p-values." ; schema1:url . kgr:eram.downloads a schema1:Product ; rdfs:label "eRAM Data Downloads" ; dcterms:description "Downloadable data files containing rare disease annotations, phenotypes, symptoms, genes, and genotypes" ; schema1:url . kgr:eram.web a schema1:GraphicalInterface ; rdfs:label "eRAM Web Interface" ; dcterms:description "Web-based interface for browsing and querying rare disease annotations including phenotypes, symptoms, genes, and genotypes with tree-structured disease organization" ; schema1:url . kgr:ero.owl a schema1:OntologyProduct ; rdfs:label "ero.owl" ; dcterms:description "eagle-i resource ontology in OWL format" ; schema1:url . kgr:eupath.owl a schema1:OntologyProduct ; rdfs:label "eupath.owl" ; dcterms:description "VEuPathDB ontology in OWL format" ; schema1:url . kgr:eupathdb.api a schema1:ProgrammingInterface ; rdfs:label "VEuPathDB Web Services API" ; dcterms:description "Web services API for programmatic access to EuPathDB data and analyses." ; schema1:url . kgr:eupathdb.apollo a schema1:GraphicalInterface ; rdfs:label "Apollo Genome Annotation" ; dcterms:description "Real-time collaborative genome annotation and curation platform for structural and functional annotation." ; schema1:url . kgr:eupathdb.docs a schema1:DocumentationProduct ; rdfs:label "VEuPathDB Documentation and Tutorials" ; dcterms:description "Comprehensive documentation including tutorials, exercises, and user guides for VEuPathDB tools and features." ; schema1:url . kgr:eupathdb.downloads a schema1:Product ; rdfs:label "VEuPathDB Data Downloads" ; dcterms:description "FTP and download access to genome sequences, annotations, and analysis results for component databases." ; schema1:url . kgr:eupathdb.mapveu a schema1:GraphicalInterface ; rdfs:label "MapVEu" ; dcterms:description "Map-based visualization tool for field-collected data including insecticide resistance, population abundance, and pathogen infection status." ; schema1:url . kgr:eupathdb.portal a schema1:GraphicalInterface ; rdfs:label "VEuPathDB Web Portal" ; dcterms:description "Web portal for searching, browsing, and analyzing eukaryotic pathogen genomic data including gene searches, genome browsers, and pathway analysis." ; schema1:url . kgr:evlncrnas.circrnas a schema1:GraphicalInterface ; rdfs:label "CircRNA Browser" ; dcterms:description "Browse circular RNA (circRNA) entries with functional validation" ; schema1:url . kgr:evlncrnas.diseases a schema1:GraphicalInterface ; rdfs:label "Disease Browser" ; dcterms:description "Browse lncRNAs by associated diseases including cancers and other pathologies" ; schema1:url . kgr:evlncrnas.download a schema1:Product ; rdfs:label "Download Data" ; dcterms:description "Download page for bulk data access to EVLncRNAs database content" ; schema1:url . kgr:evlncrnas.exosomal a schema1:GraphicalInterface ; rdfs:label "Exosomal lncRNA Browser" ; dcterms:description "Browse exosomal lncRNAs from extracellular vesicles" ; schema1:url . kgr:evlncrnas.help a schema1:DocumentationProduct ; rdfs:label "Help Documentation" ; dcterms:description "Help documentation and usage instructions for EVLncRNAs database" ; schema1:url . kgr:evlncrnas.interactions a schema1:GraphicalInterface ; rdfs:label "Interaction Network Viewer" ; dcterms:description "Interactive network visualization of lncRNA interactions with proteins, RNAs, and DNAs" ; schema1:url . kgr:evlncrnas.peptide a schema1:GraphicalInterface ; rdfs:label "Peptide-Coding lncRNA Browser" ; dcterms:description "Browse peptide-coding lncRNAs validated by experiments" ; schema1:url . kgr:evlncrnas.portal a schema1:GraphicalInterface ; rdfs:label "EVLncRNAs Web Portal" ; dcterms:description "Web portal for browsing and searching experimentally validated functional lncRNAs" ; schema1:url . kgr:evlncrnas.resistant a schema1:GraphicalInterface ; rdfs:label "Resistant lncRNA Browser" ; dcterms:description "Browse resistant lncRNAs including drug resistance-associated entries" ; schema1:url . kgr:evlncrnas.species a schema1:GraphicalInterface ; rdfs:label "Species Browser" ; dcterms:description "Browse functional lncRNAs by species with sortable entries" ; schema1:url . kgr:evlncrnas.structures a schema1:GraphicalInterface ; rdfs:label "Structure Browser" ; dcterms:description "Browse lncRNA structural information from experimental studies" ; schema1:url . kgr:exmo.owl a schema1:OntologyProduct ; rdfs:label "exmo.owl" ; dcterms:description "Exercise Medicine Ontology in OWL format" ; schema1:url . kgr:exo.obo a schema1:OntologyProduct ; rdfs:label "exo.obo" ; dcterms:description "Exposure ontology in OBO format" ; schema1:url . kgr:exo.owl a schema1:OntologyProduct ; rdfs:label "exo.owl" ; dcterms:description "Exposure ontology in OWL format" ; schema1:url . kgr:expressionatlas.api a schema1:ProgrammingInterface ; rdfs:label "Expression Atlas REST API" ; dcterms:description "REST API for programmatic access to expression data, experiment metadata, and differential expression results" ; schema1:url . kgr:expressionatlas.baseline-summary a schema1:Product ; rdfs:label "Expression Atlas Baseline Summary" ; dcterms:description "Baseline expression summary data across human tissues and cell types from GTEx, Human Protein Atlas and other major studies" ; schema1:url . kgr:expressionatlas.differential-results a schema1:Product ; rdfs:label "Expression Atlas Differential Results" ; dcterms:description "Differential gene expression results across diseases, perturbations, and comparative studies with statistical significance metrics" ; schema1:url . kgr:expressionatlas.documentation a schema1:DocumentationProduct ; rdfs:label "Expression Atlas Help Documentation" ; dcterms:description "Comprehensive help documentation covering data access, analysis methods, API usage, and interpretation guidelines" ; schema1:url . kgr:expressionatlas.experiment-downloads a schema1:Product ; rdfs:label "Expression Atlas Experiment Downloads" ; dcterms:description "Individual experiment data downloads in TSV format containing expression matrices and statistical results" ; schema1:url . kgr:expressionatlas.ftp-bulk a schema1:Product ; rdfs:label "Expression Atlas FTP (Bulk Data)" ; dcterms:description "FTP archive containing processed expression data files, experiment metadata, and analysis results for bulk RNA-seq experiments" ; schema1:url . kgr:expressionatlas.portal a schema1:GraphicalInterface ; rdfs:label "Expression Atlas Portal" ; dcterms:description "Main web portal for searching and exploring gene expression data across species, tissues, and experimental conditions with interactive heatmaps and visualizations" ; schema1:url . kgr:expressionatlas.r-objects a schema1:Product ; rdfs:label "Expression Atlas R Data Objects" ; dcterms:description "Normalized gene expression data and raw count matrices in R data object format for computational analysis" ; schema1:url . kgr:expressionatlas.single-cell a schema1:GraphicalInterface ; rdfs:label "Single Cell Expression Atlas" ; dcterms:description "Single Cell Expression Atlas portal for exploring single-cell RNA-seq data with interactive t-SNE/UMAP plots, cell type annotations, and marker gene analysis" ; schema1:url . kgr:fabio.documentation a schema1:DocumentationProduct ; rdfs:label "FABIO Documentation" ; dcterms:description "FABIO ontology documentation, specification, and usage guidelines" ; schema1:url . kgr:fabio.ttl a schema1:OntologyProduct ; rdfs:label "FABIO Turtle File" ; dcterms:description "FABIO ontology in Turtle RDF format" ; schema1:url . kgr:faers.electronic_submissions a schema1:GraphicalInterface ; rdfs:label "FAERS Electronic Submissions Portal" ; dcterms:description "Portal for submitting adverse event reports electronically to the FDA" ; schema1:url . kgr:faers.faq a schema1:DocumentationProduct ; rdfs:label "FAERS FAQ" ; dcterms:description "Frequently asked questions about FAERS data structure, reporting requirements, and data usage" ; schema1:url . kgr:faers.public_dashboard a schema1:GraphicalInterface ; rdfs:label "FAERS Public Dashboard" ; dcterms:description "Interactive dashboard for exploring FAERS data with visualizations and search capabilities" ; schema1:url . kgr:faers.quarterly_data_ascii a schema1:Product ; rdfs:label "FAERS Quarterly Data Files (ASCII)" ; dcterms:description "Quarterly data extracts in ASCII format containing demographic, drug, reaction, outcome, and source information for reported adverse events" ; schema1:url . kgr:faers.quarterly_data_xml a schema1:Product ; rdfs:label "FAERS Quarterly Data Files (XML)" ; dcterms:description "Quarterly data extracts in XML format adhering to ICH E2B standards for international safety reporting" ; schema1:url . kgr:faldo.browser a schema1:DocumentationProduct ; rdfs:label "FALDO Ontology Browser" ; dcterms:description "Interactive ontology browser with class and property descriptions" ; schema1:url . kgr:faldo.rdf a schema1:OntologyProduct ; rdfs:label "FALDO Ontology (RDF/XML)" ; dcterms:description "FALDO ontology in RDF/XML format" ; schema1:url . kgr:faldo.ttl a schema1:OntologyProduct ; rdfs:label "FALDO Ontology (Turtle)" ; dcterms:description "FALDO ontology in Turtle/RDF format for describing feature locations on sequences" ; schema1:url . kgr:fao.obo a schema1:OntologyProduct ; rdfs:label "fao.obo" ; dcterms:description "Fungal gross anatomy in OBO format" ; schema1:url . kgr:fao.owl a schema1:OntologyProduct ; rdfs:label "fao.owl" ; dcterms:description "Fungal gross anatomy in OWL format" ; schema1:url . kgr:fbbi.owl a schema1:OntologyProduct ; rdfs:label "fbbi.owl" ; dcterms:description "Biological Imaging Methods Ontology in OWL format" ; schema1:url . kgr:fbbt.fbbt-simple.obo a schema1:OntologyProduct ; rdfs:label "fbbt.fbbt-simple.obo" ; dcterms:description "Drosophila gross anatomy in OBO format" ; schema1:url . kgr:fbbt.fbbt-simple.owl a schema1:OntologyProduct ; rdfs:label "fbbt.fbbt-simple.owl" ; dcterms:description "Drosophila gross anatomy in OWL format" ; schema1:url . kgr:fbbt.json a schema1:OntologyProduct ; rdfs:label "fbbt.json" ; dcterms:description "Drosophila gross anatomy in JSON format" ; schema1:url . kgr:fbbt.obo a schema1:OntologyProduct ; rdfs:label "fbbt.obo" ; dcterms:description "Drosophila gross anatomy in OBO format" ; schema1:url . kgr:fbbt.owl a schema1:OntologyProduct ; rdfs:label "fbbt.owl" ; dcterms:description "Drosophila gross anatomy in OWL format" ; schema1:url . kgr:fbcv.json a schema1:OntologyProduct ; rdfs:label "fbcv.json" ; dcterms:description "FlyBase Controlled Vocabulary in JSON format" ; schema1:url . kgr:fbcv.obo a schema1:OntologyProduct ; rdfs:label "fbcv.obo" ; dcterms:description "FlyBase Controlled Vocabulary in OBO format" ; schema1:url . kgr:fbcv.owl a schema1:OntologyProduct ; rdfs:label "fbcv.owl" ; dcterms:description "FlyBase Controlled Vocabulary in OWL format" ; schema1:url . kgr:fbdv.fbdv-simple.obo a schema1:OntologyProduct ; rdfs:label "fbdv.fbdv-simple.obo" ; dcterms:description "Drosophila development in OBO format" ; schema1:url . kgr:fbdv.fbdv-simple.owl a schema1:OntologyProduct ; rdfs:label "fbdv.fbdv-simple.owl" ; dcterms:description "Drosophila development in OWL format" ; schema1:url . kgr:fbdv.json a schema1:OntologyProduct ; rdfs:label "fbdv.json" ; dcterms:description "Drosophila development in JSON format" ; schema1:url . kgr:fbdv.obo a schema1:OntologyProduct ; rdfs:label "fbdv.obo" ; dcterms:description "Drosophila development in OBO format" ; schema1:url . kgr:fbdv.owl a schema1:OntologyProduct ; rdfs:label "fbdv.owl" ; dcterms:description "Drosophila development in OWL format" ; schema1:url . kgr:fbsp.owl a schema1:OntologyProduct ; rdfs:label "fbsp.owl" ; dcterms:description "Fly taxonomy in OWL format" ; schema1:url . kgr:fideo.owl a schema1:OntologyProduct ; rdfs:label "fideo.owl" ; dcterms:description "Food Interactions with Drugs Evidence Ontology in OWL format" ; schema1:url . kgr:finngen.endpoints a schema1:Product ; rdfs:label "FinnGen Clinical Endpoints" ; dcterms:description "Clinical endpoint definitions and control groups for FinnGen data releases, including detailed documentation for each data freeze." ; schema1:url . kgr:finngen.meta_analysis a schema1:Product ; rdfs:label "FinnGen Meta-Analysis Results" ; dcterms:description "Results from meta-analysis of FinnGen data with other major biobanks, allowing for more powerful detection of genetic associations." ; schema1:url . kgr:finngen.risteys a schema1:GraphicalInterface ; rdfs:label "Risteys" ; dcterms:description "A web service for browsing disease endpoints in FinnGen, including statistics, definitions, and relationships between diseases." ; schema1:url . kgr:finngen.summary_stats a schema1:Product ; rdfs:label "FinnGen GWAS Summary Statistics" ; dcterms:description "Summary statistics from genome-wide association studies of various disease phenotypes conducted on Finnish population data, with the most recent release being Data Freeze 13." ; schema1:url . kgr:fiokg.sparql a schema1:ProgrammingInterface ; rdfs:label "SAWGraph FIO KG SPARQL" ; dcterms:description "SPARQL endpoint for SAWGraph FIO KG" ; schema1:url . kgr:fix.obo a schema1:OntologyProduct ; rdfs:label "fix.obo" ; dcterms:description "Physico-chemical methods and properties in OBO format" ; schema1:url . kgr:fix.owl a schema1:OntologyProduct ; rdfs:label "fix.owl" ; dcterms:description "Physico-chemical methods and properties in OWL format" ; schema1:url . kgr:flopo.owl a schema1:OntologyProduct ; rdfs:label "flopo.owl" ; dcterms:description "Flora Phenotype Ontology in OWL format" ; schema1:url . kgr:flu.owl a schema1:OntologyProduct ; rdfs:label "flu.owl" ; dcterms:description "Influenza Ontology in OWL format" ; schema1:url . kgr:flybase.bulk.data a schema1:Product ; rdfs:label "FlyBase Bulk Data Files" ; dcterms:description "Bulk data files containing gene annotations, phenotypes, interactions, expression data, stocks, and orthology information in tab-separated format" ; schema1:url . kgr:flybase.gene.sequences.fasta a schema1:Product ; rdfs:label "FlyBase Gene Sequences" ; dcterms:description "Gene, transcript, and protein sequence data for Drosophila in FASTA format, including CDS, UTRs, and polypeptide sequences" ; schema1:url . kgr:flybase.genome.annotations.gff a schema1:Product ; rdfs:label "FlyBase Genome Annotations" ; dcterms:description "Genome annotation files for Drosophila melanogaster in GFF3 format, including gene models, transcripts, exons, and functional elements" ; schema1:url . kgr:flybase.genome.sequences.fasta a schema1:Product ; rdfs:label "FlyBase Genome Sequences" ; dcterms:description "Complete genome sequences for Drosophila species in FASTA format, including chromosome assemblies and scaffolds" ; schema1:url . kgr:flybase.jbrowse a schema1:GraphicalInterface ; rdfs:label "FlyBase JBrowse Genome Browser" ; dcterms:description "Interactive genome browser for visualizing Drosophila genomes, gene models, expression data, and genomic features using JBrowse technology" ; schema1:url . kgr:flybase.web.interface a schema1:GraphicalInterface ; rdfs:label "FlyBase Web Interface" ; dcterms:description "Web-based search and query interface for accessing FlyBase data, including gene information, phenotypes, stocks, and literature" ; schema1:url . kgr:fma.owl a schema1:OntologyProduct ; rdfs:label "fma.owl" ; dcterms:description "Foundational Model of Anatomy Ontology (subset) in OWL format" ; schema1:url . kgr:fobi.owl a schema1:OntologyProduct ; rdfs:label "FOBI is an ontology to represent food intake data and associate it with metabolomic data" ; dcterms:description "FOBI is an ontology to represent food intake data and associate it with metabolomic data" ; schema1:url . kgr:foodb.data.csv a schema1:Product ; rdfs:label "FooDB CSV Data" ; dcterms:description "Complete FooDB database in CSV format" ; schema1:url . kgr:foodb.data.experimental_cms a schema1:Product ; rdfs:label "FooDB Experimental C-MS Spectra" ; dcterms:description "Experimental C-MS Spectra data from FooDB" ; schema1:url . kgr:foodb.data.experimental_msms a schema1:Product ; rdfs:label "FooDB Experimental MS-MS Spectra" ; dcterms:description "Experimental MS-MS Spectra data from FooDB" ; schema1:url . kgr:foodb.data.fid a schema1:Product ; rdfs:label "FooDB FID Files" ; dcterms:description "Free Induction Decay (FID) files from FooDB" ; schema1:url . kgr:foodb.data.images a schema1:Product ; rdfs:label "FooDB Image Files" ; dcterms:description "Image files of compounds, foods, and chemical structures" ; schema1:url . kgr:foodb.data.json a schema1:Product ; rdfs:label "FooDB JSON Data" ; dcterms:description "Complete FooDB database in JSON format" ; schema1:url . kgr:foodb.data.mysql a schema1:Product ; rdfs:label "FooDB MySQL Dump" ; dcterms:description "Complete FooDB database as MySQL dump" ; schema1:url . kgr:foodb.data.nmr a schema1:Product ; rdfs:label "FooDB NMR Spectra" ; dcterms:description "NMR Spectra data from FooDB" ; schema1:url . kgr:foodb.data.predicted_cms a schema1:Product ; rdfs:label "FooDB Predicted C-MS Spectra" ; dcterms:description "Predicted C-MS Spectra data from FooDB" ; schema1:url . kgr:foodb.data.predicted_msms a schema1:Product ; rdfs:label "FooDB Predicted MS-MS Spectra" ; dcterms:description "Predicted MS-MS Spectra data from FooDB" ; schema1:url . kgr:foodb.data.xml a schema1:Product ; rdfs:label "FooDB XML Data" ; dcterms:description "Complete FooDB database in XML format" ; schema1:url . kgr:foodb.web a schema1:GraphicalInterface ; rdfs:label "FooDB Web Interface" ; dcterms:description "Web interface that allows searching, browsing, and exploring food compounds and their properties." ; schema1:url . kgr:fooddb.csv a schema1:Product ; rdfs:label "FooDB CSV File" ; dcterms:description "FooDB complete dataset in CSV format (TAR/GZ compressed, 952.52 MB)" ; schema1:url . kgr:fooddb.json a schema1:Product ; rdfs:label "FooDB JSON File" ; dcterms:description "FooDB complete dataset in JSON format (ZIP compressed, 86.66 MB)" ; schema1:url . kgr:fooddb.mysql a schema1:Product ; rdfs:label "FooDB MySQL Dump File" ; dcterms:description "FooDB complete dataset as MySQL database dump (TAR/GZ compressed, 172.73 MB)" ; schema1:url . kgr:fooddb.portal a schema1:GraphicalInterface ; rdfs:label "FooDB Web Portal" ; dcterms:description "Interactive web interface for browsing and searching food composition data" ; schema1:url . kgr:fooddb.xml a schema1:Product ; rdfs:label "FooDB XML File" ; dcterms:description "FooDB complete dataset in XML format (TAR/GZ compressed, 6438.08 MB)" ; schema1:url . kgr:foodon.owl a schema1:OntologyProduct ; rdfs:label "FoodOn ontology with import file references and over 9,000 food products" ; dcterms:description "FoodOn ontology with import file references and over 9,000 food products" ; schema1:url . kgr:foodon_core.owl a schema1:OntologyProduct ; rdfs:label "FoodOn core ontology (currently the same as foodon.owl)" ; dcterms:description "FoodOn core ontology (currently the same as foodon.owl)" ; schema1:url . kgr:forum.api a schema1:ProgrammingInterface ; rdfs:label "FORUM API" ; dcterms:description "FORUM REST API for programmatic access to chemical-disease associations" ; schema1:url . kgr:forum.void a schema1:DocumentationProduct ; rdfs:label "FORUM VoID Metadata" ; dcterms:description "FORUM VoID (Vocabulary of Interlinked Datasets) metadata describing the knowledge graph structure" ; schema1:url . kgr:forum.webapp a schema1:GraphicalInterface ; rdfs:label "FORUM Web Application" ; dcterms:description "FORUM web application interface for semantic metabolomics exploration" ; schema1:url . kgr:fovt.fovt-base.obo a schema1:OntologyProduct ; rdfs:label "fovt.fovt-base.obo" ; dcterms:description "FuTRES Ontology of Vertebrate Traits in OBO format" ; schema1:url . kgr:fovt.fovt-base.owl a schema1:OntologyProduct ; rdfs:label "fovt.fovt-base.owl" ; dcterms:description "FuTRES Ontology of Vertebrate Traits in OWL format" ; schema1:url . kgr:fovt.obo a schema1:OntologyProduct ; rdfs:label "fovt.obo" ; dcterms:description "FuTRES Ontology of Vertebrate Traits in OBO format" ; schema1:url . kgr:fovt.owl a schema1:OntologyProduct ; rdfs:label "fovt.owl" ; dcterms:description "FuTRES Ontology of Vertebrate Traits in OWL format" ; schema1:url . kgr:fypo.obo a schema1:OntologyProduct ; rdfs:label "fypo.obo" ; dcterms:description "Fission Yeast Phenotype Ontology in OBO format" ; schema1:url . kgr:fypo.owl a schema1:OntologyProduct ; rdfs:label "fypo.owl" ; dcterms:description "Fission Yeast Phenotype Ontology in OWL format" ; schema1:url . kgr:gallont.json a schema1:OntologyProduct ; rdfs:label "gallont.json" ; dcterms:description "Plant Gall Ontology in JSON format" ; schema1:url . kgr:gallont.obo a schema1:OntologyProduct ; rdfs:label "gallont.obo" ; dcterms:description "Plant Gall Ontology in OBO format" ; schema1:url . kgr:gallont.owl a schema1:OntologyProduct ; rdfs:label "gallont.owl" ; dcterms:description "Plant Gall Ontology in OWL format" ; schema1:url . kgr:gaz.gaz-countries.owl a schema1:OntologyProduct ; rdfs:label "GAZ countries" ; dcterms:description "A country specific subset of the GAZ." ; schema1:url . kgr:gaz.obo a schema1:OntologyProduct ; rdfs:label "gaz.obo" ; dcterms:description "Gazetteer in OBO format" ; schema1:url . kgr:gaz.owl a schema1:OntologyProduct ; rdfs:label "gaz.owl" ; dcterms:description "Gazetteer in OWL format" ; schema1:url . kgr:gbif a schema1:DataSource, "Organization" ; rdfs:label "Global Biodiversity Information Facility (GBIF)" ; dcterms:created "2025-12-17T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "Global Biodiversity Information Facility (GBIF) is an international network and data infrastructure providing open access to over 3.1 billion species occurrence records from 81,000+ datasets contributed by 2,500+ publishing institutions worldwide. GBIF aggregates species distribution and biodiversity data using Darwin Core standards." ; dcterms:identifier "gbif" ; dcterms:isReferencedBy ; dcterms:license ; dcterms:modified "2026-02-20T00:00:00+00:00"^^xsd:dateTime ; schema1:about ; schema1:hasPart kgr:gbif.api, kgr:gbif.csv-download, kgr:gbif.documentation, kgr:gbif.dwc-archive, kgr:gbif.ipt, kgr:gbif.maps-api, kgr:gbif.portal ; schema1:identifier "gbif" ; schema1:name "Global Biodiversity Information Facility (GBIF)" ; doap:repository ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:gbif-secretariat . kgr:gbif-secretariat a "Organization" ; rdfs:label "GBIF Secretariat" . kgr:gbif.api a schema1:ProgrammingInterface ; rdfs:label "GBIF REST API" ; dcterms:description "RESTful API providing programmatic access to registry, species, occurrence, and map data with JSON responses and support for complex queries" ; schema1:url . kgr:gbif.csv-download a schema1:Product ; rdfs:label "GBIF Simple CSV Downloads" ; dcterms:description "Simple CSV format occurrence downloads with interpreted data and commonly used columns, suitable for spreadsheet and programming analysis" ; schema1:url . kgr:gbif.documentation a schema1:DocumentationProduct ; rdfs:label "GBIF Technical Documentation" ; dcterms:description "Comprehensive technical documentation, API reference, developer guides, and data formats documentation" ; schema1:url . kgr:gbif.dwc-archive a schema1:Product ; rdfs:label "GBIF Darwin Core Archive Downloads" ; dcterms:description "Darwin Core Archive format occurrence downloads from 81,000+ datasets with interpreted and verbatim data, metadata, and multimedia information" ; schema1:url . kgr:gbif.ipt a schema1:Product ; rdfs:label "GBIF Integrated Publishing Toolkit (IPT)" ; dcterms:description "Integrated Publishing Toolkit (IPT) - free, open-source Java software for publishing Darwin Core formatted biodiversity datasets with web interface and automated data management capabilities" ; schema1:url . kgr:gbif.maps-api a schema1:ProgrammingInterface ; rdfs:label "GBIF Maps API" ; dcterms:description "Raster tile maps API providing global occurrence distribution maps in PNG and Mapbox Vector Tile (MVT) formats" ; schema1:url . kgr:gbif.portal a schema1:GraphicalInterface ; rdfs:label "GBIF.org Portal" ; dcterms:description "Web portal for searching, filtering, and discovering occurrence records, species information, datasets, and organizations with interactive mapping and download capabilities" ; schema1:url . kgr:gdc.api a schema1:ProgrammingInterface ; rdfs:label "GDC API" ; dcterms:description "REST API documentation and endpoint for programmatic access to GDC metadata and files." ; schema1:url . kgr:gdc.data-transfer-tool a schema1:DocumentationProduct ; rdfs:label "GDC Data Transfer Tool" ; dcterms:description "Documentation and download links for the GDC Data Transfer Tool used for bulk file download." ; schema1:url . kgr:gdc.portal a schema1:GraphicalInterface ; rdfs:label "GDC Data Portal" ; dcterms:description "Main GDC web portal for interactive exploration of projects, cohorts, and files." ; schema1:url . kgr:gdsc.anova a schema1:Product ; rdfs:label "GDSC ANOVA Results" ; dcterms:description "ANOVA analysis results of associations between drug sensitivity and genomic features" ; schema1:url . kgr:gdsc.drug_data a schema1:Product ; rdfs:label "GDSC Drug Sensitivity Data" ; dcterms:description "Drug sensitivity data including IC50 values for cancer cell lines" ; schema1:url . kgr:gdsc.ftp a schema1:Product ; rdfs:label "GDSC FTP Data Repository" ; dcterms:description "FTP repository with all GDSC data releases and archives" ; schema1:url . kgr:gdsc.genetic_features a schema1:Product ; rdfs:label "GDSC Genetic Features" ; dcterms:description "Genetic feature data including mutations, copy number variations, gene expression, and methylation" ; schema1:url . kgr:gdsc.site a schema1:GraphicalInterface ; rdfs:label "GDSC Web Interface" ; dcterms:description "Web interface for searching and browsing GDSC data including cell lines, compounds, and genomic features" ; schema1:url . kgr:gecko.owl a schema1:OntologyProduct ; rdfs:label "gecko.owl" ; dcterms:description "Genomics Cohorts Knowledge Ontology in OWL format" ; schema1:url . kgr:gelinea.tool a schema1:Product ; rdfs:label "GeLiNEA Tool" ; dcterms:description "Command-line tool for performing gene-list network enrichment analysis using degree-preserving random gene list null models" ; schema1:url . kgr:genage.human a schema1:Product ; rdfs:label "GenAge Human Genes Dataset" ; dcterms:description "Tab-delimited file containing all human ageing-related genes with extensive annotations" ; schema1:url . kgr:genage.human.search a schema1:GraphicalInterface ; rdfs:label "GenAge Human Genes Search" ; dcterms:description "Web interface for searching and browsing human ageing-related genes" ; schema1:url . kgr:genage.models a schema1:Product ; rdfs:label "GenAge Model Organisms Dataset" ; dcterms:description "Tab-delimited file containing genes associated with longevity and ageing in model organisms (yeast, worms, flies, mice)" ; schema1:url . kgr:genage.models.search a schema1:GraphicalInterface ; rdfs:label "GenAge Model Organisms Search" ; dcterms:description "Web interface for searching and browsing model organism ageing genes" ; schema1:url . kgr:gencc.database a schema1:Product ; rdfs:label "GenCC Database" ; dcterms:description "The GenCC database containing over 15,000 curated gene-disease validity assertions on 4,500+ unique genes from 12 international submitters, with standardized classifications and evidence links" ; schema1:url . kgr:gencc.downloads a schema1:Product ; rdfs:label "GenCC Data Downloads" ; dcterms:description "Freely available downloadable datasets in multiple formats (XLSX, XLS, TSV, CSV) containing all GenCC gene-disease assertions with comprehensive metadata under CC0 1.0 Public Domain Dedication" ; schema1:url . kgr:gencc.search_interface a schema1:GraphicalInterface ; rdfs:label "GenCC Search Interface" ; dcterms:description "Interactive web-based search and browse interface at search.thegencc.org allowing users to filter gene-disease assertions by gene symbol, disease, submitter, and validity classification" ; schema1:url . kgr:gencode.human.gtf a schema1:Product ; rdfs:label "GENCODE Human Annotations GTF" ; dcterms:description "Comprehensive gene annotations for human genome in GTF format" ; schema1:url . kgr:gencode.mouse.gtf a schema1:Product ; rdfs:label "GENCODE Mouse Annotations GTF" ; dcterms:description "Comprehensive gene annotations for mouse genome in GTF format" ; schema1:url . kgr:gencode.primary a schema1:Product ; rdfs:label "GENCODE Primary Transcripts" ; dcterms:description "GENCODE Primary transcript set capturing minimal transcripts at protein coding genes" ; schema1:url . kgr:gendr.api a schema1:ProgrammingInterface ; rdfs:label "GenDR API" ; dcterms:description "Programmatic access to GenDR data" ; schema1:url . kgr:gendr.data a schema1:Product ; rdfs:label "GenDR Data Download" ; dcterms:description "Downloadable dataset of dietary restriction-related genes" ; schema1:url . kgr:gendr.web a schema1:GraphicalInterface ; rdfs:label "GenDR Web Interface" ; dcterms:description "Web-based search and browsing interface for GenDR" ; schema1:url . kgr:gene-ontology-consortium a "Organization" ; rdfs:label "Gene Ontology Consortium" . kgr:gene-ontology.amigo a schema1:GraphicalInterface ; rdfs:label "AmiGO 2" ; dcterms:description "Gene Ontology web browser and search interface" ; schema1:url . kgr:gene-ontology.api a schema1:ProgrammingInterface ; rdfs:label "Gene Ontology API" ; dcterms:description "Gene Ontology API for programmatic access" ; schema1:url . kgr:gene2phenotype.api a schema1:ProgrammingInterface ; rdfs:label "Gene2Phenotype API" ; dcterms:description "API documentation interface for programmatic access to G2P records." ; schema1:url . kgr:gene2phenotype.api.schema a schema1:ProgrammingInterface ; rdfs:label "Gene2Phenotype API Schema" ; dcterms:description "OpenAPI schema endpoint for the Gene2Phenotype API." ; schema1:url . kgr:gene2phenotype.portal a schema1:GraphicalInterface ; rdfs:label "Gene2Phenotype Portal" ; dcterms:description "Main interface for searching curated gene-disease evidence and panels." ; schema1:url . kgr:genebass.portal a schema1:GraphicalInterface ; rdfs:label "Genebass Portal" ; dcterms:description "Interactive web interface for searching and browsing Genebass gene-based and variant-level association results." ; schema1:url . kgr:genecards.web.interface a schema1:GraphicalInterface ; rdfs:label "GeneCards Web Interface" ; dcterms:description "Web-based interface for searching and browsing comprehensive gene-centric information integrating data from over 200 sources" ; schema1:url . kgr:genemania.web a schema1:GraphicalInterface ; rdfs:label "GeneMANIA Web Interface" ; dcterms:description "Web interface for searching, visualizing, and analyzing functional association networks" ; schema1:url . kgr:genepio.owl a schema1:OntologyProduct ; rdfs:label "genepio.owl" ; dcterms:description "Genomic Epidemiology Ontology in OWL format" ; schema1:url . kgr:geneprof.translator-wiki a schema1:GraphicalInterface ; rdfs:label "GeneProf Translator Wiki Page" ; dcterms:description "Translator wiki page documenting the GeneProf resource and historical access details." ; schema1:url . kgr:genetics-kp.code a schema1:ProcessProduct ; rdfs:label "Genetics KP Source Code" ; dcterms:description "Source code repository for the Genetics Knowledge Provider implementation." ; schema1:url . kgr:genetics-kp.docs a schema1:DocumentationProduct ; rdfs:label "Genetics KP Documentation" ; dcterms:description "Team overview and data source documentation for the Genetics Knowledge Provider." ; schema1:url . kgr:geneticskp.trapi a schema1:ProgrammingInterface ; rdfs:label "Genetics KP TRAPI Endpoint" ; dcterms:description "Translator Reasoner API endpoint for Genetics KP." ; schema1:url . kgr:geno.owl a schema1:OntologyProduct ; rdfs:label "GENO" ; dcterms:description "GENO" ; schema1:url . kgr:genomickb.graph a schema1:GraphProduct ; rdfs:label "GenomicKB Graph Dump" ; dcterms:description "GenomicKB 1.0 Neo4j Database Dump (Requires license)" ; schema1:url . kgr:genomickb.site a schema1:GraphicalInterface ; rdfs:label "GenomicKB Site" ; dcterms:description "Graphical interface for GenomicKB" ; schema1:url . kgr:genophenoenvo-kg.code a schema1:ProcessProduct ; rdfs:label "GenoPhenoEnvo KG Construction Pipeline" ; dcterms:description "Python-based pipeline for downloading, transforming, and merging plant genomics and phenomics data into a standardized knowledge graph using KG-Hub tools, custom transformation scripts, and Biolink model annotations. Includes Cypher query utilities for graph exploration." ; schema1:url . kgr:genophenoenvo-kg.data a schema1:GraphProduct ; rdfs:label "GenoPhenoEnvo KG Data" ; dcterms:description "Merged knowledge graph data files containing over 400,000 nodes and 5,000,000 edges integrating gene expression, molecular interactions, functions, pathways, homology-based annotations, and environmental exposures from Planteome, EMBL-EBI Expression Atlas, and other sources. Available as tab-separated value files in KGX format with nodes and edges following the Biolink model." ; schema1:url . kgr:genophenoenvo-kg.neo4j a schema1:GraphicalInterface ; rdfs:label "GenoPhenoEnvo KG Neo4j Visualization" ; dcterms:description "Interactive graph database visualization and query interface using Neo4j for exploring plant gene expression patterns, homologous genes, and environmental responses across multiple plant species including Arabidopsis thaliana, Populus trichocarpa, Zea mays, Sorghum bicolor, and Oryza sativa." ; schema1:url . kgr:geo.owl a schema1:OntologyProduct ; rdfs:label "geo.owl" ; dcterms:description "Geographical Entity Ontology in OWL format" ; schema1:url . kgr:geoconnex.sparql a schema1:ProgrammingInterface ; rdfs:label "GEOCONNEX SPARQL" ; dcterms:description "SPARQL endpoint for GEOCONNEX" ; schema1:url . kgr:gff.specification a schema1:DocumentationProduct ; rdfs:label "GFF3 Specification" ; dcterms:description "GFF3 specification and documentation from Sequence Ontology" ; schema1:url . kgr:ghr.conditions a schema1:GraphicalInterface ; rdfs:label "MedlinePlus Genetics Conditions" ; dcterms:description "Browse page for genetic conditions from the MedlinePlus Genetics migration." ; schema1:url . kgr:ghr.gene-catalog a schema1:GraphicalInterface ; rdfs:label "MedlinePlus Genetics Gene Catalog" ; dcterms:description "Browse page for gene summaries from the MedlinePlus Genetics migration." ; schema1:url . kgr:ghr.portal a schema1:GraphicalInterface ; rdfs:label "MedlinePlus Genetics Portal" ; dcterms:description "MedlinePlus Genetics portal containing migrated Genetics Home Reference content." ; schema1:url . kgr:glkb.site a schema1:GraphicalInterface ; rdfs:label "GLKB Site" ; dcterms:description "Graphical interface for GLKB" ; schema1:url . kgr:globi.api a schema1:ProgrammingInterface ; rdfs:label "GloBI API" ; dcterms:description "REST-style API endpoints for programmatic species interaction queries (JSON/CSV)" ; schema1:url . kgr:globi.bee.interactions a schema1:Product ; rdfs:label "Bee Interaction Data from Global Biotic Interactions" ; dcterms:description "Bee interaction data extracted from Global Biotic Interactions (September 2021 snapshot), including flower visitation, parasitic interactions, and other bee-related interactions from natural history collections, community science, and scientific literature" ; schema1:url . kgr:globi.citations.csv a schema1:Product ; rdfs:label "GloBI data citations (CSV)" ; dcterms:description "Comma-separated data citations" ; schema1:url . kgr:globi.citations.tsv a schema1:Product ; rdfs:label "GloBI data citations (TSV)" ; dcterms:description "Tab-separated data citations" ; schema1:url . kgr:globi.datasets a schema1:Product ; rdfs:label "GloBI Datasets" ; dcterms:description "Bulk data export and dataset listing (downloads and dataset metadata)" ; schema1:url . kgr:globi.datasets.csv a schema1:Product ; rdfs:label "GloBI datasets index (CSV)" ; dcterms:description "Comma-separated dataset namespace index" ; schema1:url . kgr:globi.datasets.tsv a schema1:Product ; rdfs:label "GloBI datasets index (TSV)" ; dcterms:description "Tab-separated dataset namespace index" ; schema1:url . kgr:globi.docs a schema1:DocumentationProduct ; rdfs:label "GloBI Documentation" ; dcterms:description "About and methodological documentation, contribution guidelines, and references" ; schema1:url . kgr:globi.fields.csv a schema1:Product ; rdfs:label "interactionFields.csv" ; dcterms:description "Field (column) definitions CSV endpoint" ; schema1:url . kgr:globi.fields.json a schema1:Product ; rdfs:label "interactionFields.json" ; dcterms:description "Field (column) definitions JSON endpoint" ; schema1:url . kgr:globi.interactions.csv a schema1:Product ; rdfs:label "GloBI interpreted interactions (CSV)" ; dcterms:description "Comma-separated integrated species interaction pairs (interpreted names)" ; schema1:url . kgr:globi.interactions.nq a schema1:Product ; rdfs:label "GloBI interactions RDF (N-Quads)" ; dcterms:description "RDF N-Quads representation of interaction data" ; schema1:url . kgr:globi.interactions.tsv a schema1:Product ; rdfs:label "GloBI interpreted interactions (TSV)" ; dcterms:description "Tab-separated integrated species interaction pairs (interpreted names)" ; schema1:url . kgr:globi.neo4j.graphdb a schema1:Product ; rdfs:label "GloBI Neo4j graph database snapshot" ; dcterms:description "Neo4j graph database backup (v3.5.x) of interaction graph" ; schema1:url . kgr:globi.portal a schema1:GraphicalInterface ; rdfs:label "GloBI Portal" ; dcterms:description "Search and browse interface for interaction queries across integrated datasets" ; schema1:url . kgr:globi.refuted_interactions.csv a schema1:Product ; rdfs:label "GloBI refuted interactions (CSV)" ; dcterms:description "Comma-separated refuted species interaction pairs (interpreted names)" ; schema1:url . kgr:globi.refuted_interactions.tsv a schema1:Product ; rdfs:label "GloBI refuted interactions (TSV)" ; dcterms:description "Tab-separated refuted species interaction pairs (interpreted names)" ; schema1:url . kgr:globi.refuted_verbatim_interactions.csv a schema1:Product ; rdfs:label "GloBI refuted verbatim interactions (CSV)" ; dcterms:description "Comma-separated refuted verbatim species interaction pairs (original names)" ; schema1:url . kgr:globi.refuted_verbatim_interactions.tsv a schema1:Product ; rdfs:label "GloBI refuted verbatim interactions (TSV)" ; dcterms:description "Tab-separated refuted species interactions (original unresolved names)" ; schema1:url . kgr:globi.release a schema1:Product ; rdfs:label "GloBI Archived Release (Zenodo)" ; dcterms:description "Zenodo DOI badge pointing to latest archived release snapshot of integrated datasets" ; schema1:url . kgr:globi.taxon_cache.tsv a schema1:Product ; rdfs:label "GloBI taxonomic hierarchy cache" ; dcterms:description "Tab-separated taxonomic hierarchy and identifier cache" ; schema1:url . kgr:globi.taxon_map.tsv a schema1:Product ; rdfs:label "GloBI taxonomic name map" ; dcterms:description "Tab-separated taxonomic name mapping file" ; schema1:url . kgr:globi.verbatim_interactions.csv a schema1:Product ; rdfs:label "GloBI verbatim interactions (CSV)" ; dcterms:description "Comma-separated verbatim species interaction pairs (original unresolved names)" ; schema1:url . kgr:globi.verbatim_interactions.tsv a schema1:Product ; rdfs:label "GloBI verbatim interactions (TSV)" ; dcterms:description "Tab-separated verbatim species interaction pairs (original unresolved names)" ; schema1:url . kgr:glycocoo.ontology a schema1:OntologyProduct ; rdfs:label "GlycoCoO OWL Ontology" ; dcterms:description "The GlycoCoO OWL ontology file defining classes and predicates for glycoconjugate structures and their metadata" ; schema1:url . kgr:glycocoo.rdf-samples a schema1:Product ; rdfs:label "GlycoCoO RDF Sample Data" ; dcterms:description "Sample RDF data files demonstrating GlycoCoO usage with examples from UniCarbKB, GlyConnect, and GlycoNAVI" ; schema1:url . kgr:glycocoo.sparql-examples a schema1:Product ; rdfs:label "GlycoCoO SPARQL Query Examples" ; dcterms:description "Example SPARQL queries for querying glycoconjugate data across federated endpoints" ; schema1:url . kgr:glycocoo.wiki a schema1:DocumentationProduct ; rdfs:label "GlycoCoO Wiki Documentation" ; dcterms:description "GitHub Wiki with developer information, database providers, and prefix documentation" ; schema1:url . kgr:glyconnect.api.rest a schema1:ProgrammingInterface ; rdfs:label "GlyConnect RESTful API" ; dcterms:description "RESTful API for accessing GlyConnect data" ; schema1:url . kgr:glyconnect.api.sparql a schema1:ProgrammingInterface ; rdfs:label "GlyConnect SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying GlyConnect RDF data" ; schema1:url . kgr:glyconnect.compositions a schema1:Product ; rdfs:label "GlyConnect Glycan Compositions" ; dcterms:description "Compositions dataset containing glycan compositions" ; schema1:url . kgr:glyconnect.immunoglobulins a schema1:Product ; rdfs:label "GlyConnect Immunoglobulins Dataset" ; dcterms:description "Immunoglobulins dataset containing glycans commonly found on immunoglobulins" ; schema1:url . kgr:glyconnect.site a schema1:GraphicalInterface ; rdfs:label "GlyConnect Web Interface" ; dcterms:description "Web interface for exploring GlyConnect data" ; schema1:url . kgr:glycordf.bioportal a schema1:GraphicalInterface ; rdfs:label "GlycoRDF BioPortal Entry" ; dcterms:description "NCBO BioPortal entry for browsing and exploring the GlycoRDF ontology" ; schema1:url . kgr:glycordf.documentation a schema1:DocumentationProduct ; rdfs:label "GlycoRDF Documentation" ; dcterms:description "Comprehensive documentation of the GlycoRDF ontology classes, predicates, and usage examples" ; schema1:url . kgr:glycordf.github a schema1:GraphicalInterface ; rdfs:label "GlycoRDF GitHub Repository" ; dcterms:description "GitHub repository containing ontology files, documentation, and source code for RDF generation" ; schema1:url . kgr:glycordf.homepage a schema1:GraphicalInterface ; rdfs:label "GlycoRDF Project Homepage" ; dcterms:description "Official project homepage with overview, documentation, and links to database implementations" ; schema1:url . kgr:glycordf.java-source a schema1:ProcessProduct ; rdfs:label "GlycoRDF Java Source Code" ; dcterms:description "Java source code for generating GlycoRDF data from glycomics databases" . kgr:glycordf.ontology a schema1:OntologyProduct ; rdfs:label "GlycoRDF Ontology (OWL)" ; dcterms:description "OWL ontology file defining the GlycoRDF standard for representing glycomics data in RDF format" ; schema1:url . kgr:glycordf.wiki a schema1:DocumentationProduct ; rdfs:label "GlycoRDF Wiki" ; dcterms:description "Wiki with developer information, database provider documentation, and implementation guidelines" ; schema1:url . kgr:glygen.api a schema1:ProgrammingInterface ; rdfs:label "GlyGen API" ; dcterms:description "RESTful API for accessing GlyGen data" ; schema1:url . kgr:glygen.data.site a schema1:GraphicalInterface ; rdfs:label "GlyGen Data Downloads" ; dcterms:description "Interface for searching GlyGen protein and glycan data" ; schema1:url . kgr:glygen.site a schema1:GraphicalInterface ; rdfs:label "GlyGen Website" ; dcterms:description "Web interface for exploring GlyGen data" ; schema1:url . kgr:gno.json a schema1:OntologyProduct ; rdfs:label "gno.json" ; dcterms:description "Glycan Naming and Subsumption Ontology, JSON format (automated conversion from OWL)" ; schema1:url . kgr:gno.obo a schema1:OntologyProduct ; rdfs:label "gno.obo" ; dcterms:description "Glycan Naming and Subsumption Ontology, OBO format (automated conversion from OWL)" ; schema1:url . kgr:gno.owl a schema1:OntologyProduct ; rdfs:label "gno.owl" ; dcterms:description "Glycan Naming and Subsumption Ontology, OWL format (primary)" ; schema1:url . kgr:go-cam.api a schema1:ProgrammingInterface ; rdfs:label "GO-CAM API" ; dcterms:description "Programmatic access to GO-CAM models through the Gene Ontology API" ; schema1:url . kgr:go-cam.browser a schema1:GraphicalInterface ; rdfs:label "GO-CAM Browser" ; dcterms:description "Web interface for browsing, searching, and exploring GO-CAM models" ; schema1:url . kgr:go-cam.minerva a schema1:ProcessProduct ; rdfs:label "Minerva" ; dcterms:description "Server-side component for storing, validating, and reasoning over GO-CAM models" ; schema1:url . kgr:go-cam.model a schema1:DataModelProduct ; rdfs:label "GO-CAM Model Format" ; dcterms:description "RDF-based format for representing causal activity models in Gene Ontology" ; schema1:url . kgr:go-cam.noctua a schema1:GraphicalInterface ; rdfs:label "Noctua" ; dcterms:description "Web-based tool for collaborative editing of Gene Ontology Causal Activity Models (GO-CAMs)" ; schema1:url . kgr:go.extensions.go-plus.json a schema1:OntologyProduct ; rdfs:label "GO-Plus" ; dcterms:description "As go-plus.owl, in obographs json format" ; schema1:url . kgr:go.extensions.go-plus.owl a schema1:OntologyProduct ; rdfs:label "GO-Plus" ; dcterms:description "The main ontology plus axioms connecting to select external ontologies, with subsets of those ontologies" ; schema1:url . kgr:go.extensions.go-taxon-groupings.owl a schema1:OntologyProduct ; rdfs:label "GO Taxon Groupings" ; dcterms:description "Classes added to ncbitaxon for groupings such as prokaryotes" ; schema1:url . kgr:go.go-base.owl a schema1:OntologyProduct ; rdfs:label "GO Base Module" ; dcterms:description "The main ontology plus axioms connecting to select external ontologies, excluding the external ontologies themselves" ; schema1:url . kgr:go.go-basic.json a schema1:OntologyProduct ; rdfs:label "GO-Basic, Filtered, for use with legacy tools (JSON)" ; dcterms:description "As go-basic.obo, in json format" ; schema1:url . kgr:go.go-basic.obo a schema1:OntologyProduct ; rdfs:label "GO-Basic, Filtered, for use with legacy tools" ; dcterms:description "Basic version of the GO, filtered such that the graph is guaranteed to be acyclic and annotations can be propagated up the graph. The relations included are is a, part of, regulates, negatively regulates and positively regulates. This version excludes relationships that cross the 3 GO hierarchies." ; schema1:url . kgr:go.json a schema1:OntologyProduct ; rdfs:label "GO (JSON edition)" ; dcterms:description "Equivalent to go.owl, in obograph json format" ; schema1:url . kgr:go.snapshot.go.obo a schema1:OntologyProduct ; rdfs:label "GO (OBO Format edition), daily snapshot release" ; dcterms:description "Equivalent to go.owl, but released daily. Note the snapshot release is not archived." ; schema1:url . kgr:go.snapshot.go.owl a schema1:OntologyProduct ; rdfs:label "GO (OWL edition), daily snapshot release" ; dcterms:description "Equivalent to go.owl, but released daily. Note the snapshot release is not archived." ; schema1:url . kgr:goa.documentation a schema1:DocumentationProduct ; rdfs:label "GOA Documentation" ; dcterms:description "Documentation including FAQ, About pages, and contact information" ; schema1:url . kgr:goa.portal a schema1:GraphicalInterface ; rdfs:label "GOA Website" ; dcterms:description "Web portal for accessing GOA information, statistics, and navigation to downloads" ; schema1:url . kgr:goldterms.bioportal a schema1:GraphicalInterface ; rdfs:label "GOLDTERMS on BioPortal" ; schema1:url . kgr:goldterms.data.owl a schema1:DataModelProduct ; rdfs:label "Main GOLDTERMS OWL release" ; schema1:url . kgr:goldterms.definitions.yaml a schema1:DataModelProduct ; rdfs:label "GOLD definitions in YAML format" ; schema1:url . kgr:gp-kg.graph a schema1:GraphProduct ; rdfs:label "GP-KG" ; dcterms:description "GP_KG.txt" ; schema1:url . kgr:gp-kg.process.kg-predict a schema1:ProcessProduct ; rdfs:label "KG-Predict" ; dcterms:description "A computational framework for drug repurposing, used with GP-KG" ; schema1:url . kgr:gramene a "Organization" ; rdfs:label "Gramene Project" . kgr:greengenes.ftp a schema1:Product ; rdfs:label "Greengenes2 FTP Archive" ; dcterms:description "FTP archive containing Greengenes2 database files including phylogenetic trees, taxonomy, and sequence data" ; schema1:url . kgr:greengenes.phylogeny a schema1:Product ; rdfs:label "Greengenes2 Phylogenetic Tree" ; dcterms:description "Reference phylogenetic tree in Newick format containing unified microbial phylogeny" ; schema1:url . kgr:greengenes.portal a schema1:GraphicalInterface ; rdfs:label "Greengenes2 Web Portal" ; dcterms:description "Web-based search interface for querying Greengenes2 database by species, ASV sequences, or clade names" ; schema1:url . kgr:greengenes.qiime2-plugin a schema1:ProcessProduct ; rdfs:label "q2-greengenes2 Plugin" ; dcterms:description "QIIME 2 plugin for integrating Greengenes2 data into microbiome analysis workflows" ; schema1:url . kgr:greengenes.sequences a schema1:Product ; rdfs:label "Greengenes2 Sequences" ; dcterms:description "16S rRNA gene sequences in FASTA format for all organisms in the database" ; schema1:url . kgr:greengenes.taxonomy a schema1:Product ; rdfs:label "Greengenes2 Taxonomy" ; dcterms:description "Taxonomic assignments and metadata for all sequences in the database" ; schema1:url . kgr:gsso.json a schema1:OntologyProduct ; rdfs:label "gsso.json" ; dcterms:description "Gender, Sex, and Sexual Orientation (GSSO) ontology in JSON format" ; schema1:url . kgr:gsso.obo a schema1:OntologyProduct ; rdfs:label "gsso.obo" ; dcterms:description "Gender, Sex, and Sexual Orientation (GSSO) ontology in OBO format" ; schema1:url . kgr:gsso.owl a schema1:OntologyProduct ; rdfs:label "gsso.owl" ; dcterms:description "Gender, Sex, and Sexual Orientation (GSSO) ontology in OWL format" ; schema1:url . kgr:gtex.api a schema1:ProgrammingInterface ; rdfs:label "GTEx REST API" ; dcterms:description "GTEx REST API for programmatic access to gene expression and eQTL data" ; schema1:url . kgr:gtex.bulk-data a schema1:Product ; rdfs:label "GTEx Bulk Data Downloads" ; dcterms:description "Complete GTEx v8 data including gene expression, transcript expression, exon expression, and junction data across tissues" ; schema1:url . kgr:gtex.dbgap-data a schema1:Product ; rdfs:label "GTEx dbGaP Data" ; dcterms:description "Individual-level genotype and phenotype data available through dbGaP" ; schema1:url . kgr:gtex.eqtl-data a schema1:Product ; rdfs:label "GTEx eQTL Data" ; dcterms:description "eQTL (expression quantitative trait loci) data linking genetic variants to gene expression across tissues" ; schema1:url . kgr:gtex.portal a schema1:GraphicalInterface ; rdfs:label "GTEx Portal" ; dcterms:description "GTEx Portal web interface for exploring tissue-specific gene expression data, eQTLs, and other genomic analyses" ; schema1:url . kgr:gtopdb.api.rest a schema1:ProgrammingInterface ; rdfs:label "Guide to Pharmacology REST API" ; dcterms:description "RESTful web services enabling computational access to most of the GtoPdb data in JSON format" ; schema1:url . kgr:gtopdb.approved_drugs.csv a schema1:Product ; rdfs:label "GtoPdb Approved Drugs Dataset" ; dcterms:description "Detailed interactions list for approved drugs and their targets" ; schema1:url . kgr:gtopdb.database a schema1:Product ; rdfs:label "GtoPdb Full Database" ; dcterms:description "Complete PostgreSQL database dump of the current Guide to Pharmacology database" ; schema1:url . kgr:gtopdb.download.rdf a schema1:Product ; rdfs:label "GtoPdb RDF Dataset" ; dcterms:description "RDF/linked data format of the GtoPdb data (target-ligand interactions with supporting information)" ; schema1:url . kgr:gtopdb.download.sdf a schema1:Product ; rdfs:label "GtoPdb Ligand SDF File" ; dcterms:description "SDF file containing chemical structures with SMILES for all ligands in the database" ; schema1:url . kgr:gtopdb.immunopharmacology a schema1:GraphicalInterface ; rdfs:label "Guide to IMMUNOPHARMACOLOGY" ; dcterms:description "An extension of the Guide to PHARMACOLOGY database providing immunological access-point to GtoPdb data" ; schema1:url . kgr:gtopdb.interactions.csv a schema1:Product ; rdfs:label "GtoPdb Interactions Dataset" ; dcterms:description "Comprehensive dataset of all interactions between ligands and targets" ; schema1:url . kgr:gtopdb.ligands.csv a schema1:Product ; rdfs:label "GtoPdb Ligands Dataset" ; dcterms:description "Complete list of ligands including drugs, small molecules, and other bioactive compounds" ; schema1:url . kgr:gtopdb.malaria a schema1:GraphicalInterface ; rdfs:label "Guide to MALARIA PHARMACOLOGY" ; dcterms:description "A specialized portal providing optimized access for the malaria research community" ; schema1:url . kgr:gtopdb.targets.csv a schema1:Product ; rdfs:label "GtoPdb Targets and Families" ; dcterms:description "Complete list of drug targets and their families with detailed information" ; schema1:url . kgr:gtopdb.web a schema1:GraphicalInterface ; rdfs:label "Guide to Pharmacology Web Interface" ; dcterms:description "A web-based interface for accessing and browsing drug target data, ligand information, and pharmacological interactions" ; schema1:url . kgr:gtrnadb.archives a schema1:Product ; rdfs:label "Previous Releases Archive" ; dcterms:description "Archive of previous GtRNAdb data releases with change logs" ; schema1:url . kgr:gtrnadb.blast a schema1:GraphicalInterface ; rdfs:label "Search by Sequence (BLAST)" ; dcterms:description "BLAST search interface for sequence similarity searches against all tRNAs in the database" ; schema1:url . kgr:gtrnadb.browse a schema1:GraphicalInterface ; rdfs:label "Browse by Phylogeny" ; dcterms:description "Browse tRNA predictions organized by phylogenetic taxonomy (Eukaryota, Archaea, Bacteria)" ; schema1:url . kgr:gtrnadb.docs a schema1:DocumentationProduct ; rdfs:label "User Guide" ; dcterms:description "Comprehensive user guide for GtRNAdb features and search capabilities" ; schema1:url . kgr:gtrnadb.faq a schema1:DocumentationProduct ; rdfs:label "FAQ" ; dcterms:description "Frequently asked questions about GtRNAdb and tRNA gene predictions" ; schema1:url . kgr:gtrnadb.portal a schema1:GraphicalInterface ; rdfs:label "GtRNAdb Web Portal" ; dcterms:description "Web portal for browsing tRNA gene predictions organized by phylogenetic domain and species" ; schema1:url . kgr:gtrnadb.sifter a schema1:GraphicalInterface ; rdfs:label "tRNA Sifter" ; dcterms:description "Search tRNAs by species, amino acid isotype, anticodon, intron count, tRNA score, and structural features" ; schema1:url . kgr:gtrx.api a schema1:ProgrammingInterface ; rdfs:label "gTRx API" ; dcterms:description "TRAPI-compliant API for querying genomic-treatment relationships" ; schema1:url . kgr:gtrx.data a schema1:Product ; rdfs:label "gTRx Data" ; dcterms:description "Integrated genomic-treatment data for precision medicine" ; schema1:url . kgr:gutmgene.site a schema1:GraphicalInterface ; rdfs:label "GutMGene site" ; dcterms:description "GutMGene data and interface" ; schema1:url . kgr:gwascatalog.api a schema1:ProgrammingInterface ; rdfs:label "GWAS Catalog REST API v2" ; dcterms:description "REST API providing programmatic access to GWAS Catalog studies, associations, variants, traits, and summary statistics metadata" ; schema1:url . kgr:gwascatalog.associations.json a schema1:Product ; rdfs:label "GWAS Catalog Associations JSON" ; dcterms:description "Full data dump of GWAS Catalog associations in JSON format" ; schema1:url . kgr:gwascatalog.associations.owl a schema1:Product ; rdfs:label "GWAS Catalog Associations OWL" ; dcterms:description "RDF/OWL representation of GWAS Catalog associations enabling semantic integration" ; schema1:url . kgr:gwascatalog.associations.tsv a schema1:Product ; rdfs:label "GWAS Catalog Associations TSV" ; dcterms:description "Full data dump of GWAS Catalog associations in tab-delimited format (SNP-trait association data)" ; schema1:url . kgr:gwascatalog.diagram.archive a schema1:DocumentationProduct ; rdfs:label "GWAS Catalog Diagram Archive" ; dcterms:description "Archive of previous GWAS Catalog diagram versions (SVG format)" ; schema1:url . kgr:gwascatalog.diagram.current a schema1:DocumentationProduct ; rdfs:label "GWAS Catalog Diagram (Current SVG)" ; dcterms:description "Compressed GWAS Catalog diagram (karyotype visualization) in SVG format (current release)" ; schema1:url . kgr:gwascatalog.studies.tsv a schema1:Product ; rdfs:label "GWAS Catalog Studies TSV" ; dcterms:description "Study metadata file containing per-study information for GWAS Catalog entries" ; schema1:url . kgr:gwascatalog.summary_statistics.ftp a schema1:DocumentationProduct ; rdfs:label "GWAS Catalog Summary Statistics FTP" ; dcterms:description "Harmonised summary statistics landing page (FTP directory containing per-study summary statistics under CC0 where available)" ; schema1:url . kgr:gwascatalog.traits_efo.tsv a schema1:Product ; rdfs:label "GWAS Catalog Trait EFO Mappings TSV" ; dcterms:description "EFO trait mapping file linking GWAS Catalog reported traits to Experimental Factor Ontology terms" ; schema1:url . kgr:gwascatalog.variants.tsv a schema1:Product ; rdfs:label "GWAS Catalog Variants TSV" ; dcterms:description "Variant metadata file containing per-variant information (e.g., rsIDs) present in the GWAS Catalog" ; schema1:url . kgr:gwascatalog.web a schema1:GraphicalInterface ; rdfs:label "GWAS Catalog Web Portal" ; dcterms:description "Web interface for searching, browsing, and visualizing curated GWAS variant-trait associations and study metadata" ; schema1:url . kgr:hancestro-base.owl a schema1:OntologyProduct ; rdfs:label "HANCESTRO Base" ; dcterms:description "Base version of HANCESTRO" ; schema1:url . kgr:hancestro.owl a schema1:OntologyProduct ; rdfs:label "HANCESTRO" ; dcterms:description "The full version of HANCESTRO in OWL format, with BFO upper hierarchy for easier integration with other ontologies" ; schema1:url . kgr:hao.depictions.owl a schema1:OntologyProduct ; rdfs:label "hao.depictions.owl" ; dcterms:description "Hymenoptera Anatomy Ontology in OWL format" ; schema1:url . kgr:hao.obo a schema1:OntologyProduct ; rdfs:label "hao.obo" ; dcterms:description "Hymenoptera Anatomy Ontology in OBO format" ; schema1:url . kgr:hao.owl a schema1:OntologyProduct ; rdfs:label "hao.owl" ; dcterms:description "Hymenoptera Anatomy Ontology in OWL format" ; schema1:url . kgr:harmonizome-kg.api a schema1:ProgrammingInterface ; rdfs:label "Harmonizome-KG API" ; dcterms:description "RESTful API for programmatic access to Harmonizome functional genomics knowledge graph" ; schema1:url . kgr:harmonizome-kg.graph a schema1:GraphProduct ; rdfs:label "Harmonizome-KG Neo4j Database" ; dcterms:description "Neo4j database containing integrated functional genomics data with genes, proteins, pathways, diseases, and regulatory relationships" . kgr:harmonizome-kg.portal a schema1:GraphicalInterface ; rdfs:label "Harmonizome-KG Explorer" ; dcterms:description "Interactive web interface for exploring the Harmonizome knowledge graph with gene-centric network visualization" ; schema1:url . kgr:hetionet.data.edges a schema1:GraphProduct ; rdfs:label "Hetionet v1.0 edges (SIF)" ; dcterms:description "Hetionet v1.0 as SIF edges" ; schema1:url . kgr:hetionet.data.json a schema1:GraphProduct ; rdfs:label "Hetionet v1.0 JSON" ; dcterms:description "Hetionet v1.0 in JSON format" ; schema1:url . kgr:hetionet.data.neo4j a schema1:GraphProduct ; rdfs:label "Hetionet v1.0 Neo4j" ; dcterms:description "Hetionet v1.0 as a Neo4j database" ; schema1:url . kgr:hetionet.data.nodes a schema1:GraphProduct ; rdfs:label "Hetionet v1.0 nodes (TSV)" ; dcterms:description "Hetionet v1.0 as TSV nodes" ; schema1:url . kgr:hetionet.neo4j a schema1:GraphicalInterface ; rdfs:label "Hetionet v1.0 Neo4j Database" ; dcterms:description "Browser for complete Hetionet v1.0 graph database in Neo4j" ; schema1:url . kgr:hetionet.search a schema1:GraphicalInterface ; rdfs:label "Hetnet Connectivity Search" ; dcterms:description "Web application to search and explore connectivity between nodes in Hetionet" ; schema1:url . kgr:hetnetpy a schema1:ProcessProduct ; rdfs:label "hetnetpy" ; dcterms:description "Python package for creating, querying, and operating on hetnets (heterogeneous networks)" ; schema1:url . kgr:hmdb.fasta.enzymes a schema1:Product ; rdfs:label "HMDB Enzyme Protein Sequences (FASTA)" ; dcterms:description "All metabolite metabolizing enzyme protein sequences (FASTA)" ; schema1:url . kgr:hmdb.fasta.genes a schema1:Product ; rdfs:label "HMDB Gene Sequences (FASTA)" ; dcterms:description "All metabolite metabolizing enzyme gene sequences (FASTA)" ; schema1:url . kgr:hmdb.portal a schema1:GraphicalInterface ; rdfs:label "HMDB Web Portal" ; dcterms:description "Web portal providing integrated search, metabolite pages (MetaboCards), spectra, pathways, and download access" ; schema1:url . kgr:hmdb.spectra.all.peaklists a schema1:Product ; rdfs:label "HMDB All Raw Spectra Peaklists (TXT)" ; dcterms:description "All raw spectra peaklists (aggregated TXT archive)" ; schema1:url . kgr:hmdb.spectra.all.xml a schema1:Product ; rdfs:label "HMDB All Spectra (XML)" ; dcterms:description "All spectra files aggregate (XML)" ; schema1:url . kgr:hmdb.spectra.gc.experimental.xml a schema1:Product ; rdfs:label "HMDB GC-MS Experimental Spectra (XML)" ; dcterms:description "Experimental GC-MS spectra collection (XML)" ; schema1:url . kgr:hmdb.spectra.gc.predicted.txt a schema1:Product ; rdfs:label "HMDB GC-MS Predicted Peaklists (TXT)" ; dcterms:description "Predicted GC-MS spectra peaklist text files archive" ; schema1:url . kgr:hmdb.spectra.gc.predicted.xml a schema1:Product ; rdfs:label "HMDB GC-MS Predicted Spectra (XML)" ; dcterms:description "Predicted GC-MS spectra collection (XML)" ; schema1:url . kgr:hmdb.spectra.mass.images a schema1:Product ; rdfs:label "HMDB Mass Spectra Images" ; dcterms:description "Mass spectra image files archive" ; schema1:url . kgr:hmdb.spectra.msms.experimental.txt a schema1:Product ; rdfs:label "HMDB MS-MS Experimental Peaklists (TXT)" ; dcterms:description "Experimental MS-MS spectra peaklist text files archive" ; schema1:url . kgr:hmdb.spectra.msms.experimental.xml a schema1:Product ; rdfs:label "HMDB MS-MS Experimental Spectra (XML)" ; dcterms:description "Experimental MS-MS spectra collection (XML)" ; schema1:url . kgr:hmdb.spectra.msms.predicted.txt a schema1:Product ; rdfs:label "HMDB MS-MS Predicted Peaklists (TXT)" ; dcterms:description "Predicted MS-MS spectra peaklist text files archive" ; schema1:url . kgr:hmdb.spectra.msms.predicted.xml a schema1:Product ; rdfs:label "HMDB MS-MS Predicted Spectra (XML)" ; dcterms:description "Predicted MS-MS spectra collection (XML)" ; schema1:url . kgr:hmdb.spectra.nmr.fid a schema1:Product ; rdfs:label "HMDB NMR Spectra FID Files" ; dcterms:description "NMR spectra FID files archive" ; schema1:url . kgr:hmdb.spectra.nmr.peaklist a schema1:Product ; rdfs:label "HMDB NMR Peaklists (TXT)" ; dcterms:description "Raw NMR peaklist text files archive" ; schema1:url . kgr:hmdb.spectra.nmr.xml a schema1:Product ; rdfs:label "HMDB NMR Spectra (XML)" ; dcterms:description "NMR spectra collection (XML)" ; schema1:url . kgr:hmdb.structures.sdf a schema1:Product ; rdfs:label "HMDB Metabolite Structures (SDF)" ; dcterms:description "All metabolite structures (SDF)" ; schema1:url . kgr:hmdb.xml.metabolites a schema1:Product ; rdfs:label "HMDB All Metabolites (XML)" ; dcterms:description "All metabolites dataset (XML)" ; schema1:url . kgr:hmdb.xml.metabolites.csf a schema1:Product ; rdfs:label "HMDB CSF Metabolites (XML)" ; dcterms:description "Cerebrospinal fluid (CSF) metabolites subset (XML)" ; schema1:url . kgr:hmdb.xml.metabolites.feces a schema1:Product ; rdfs:label "HMDB Feces Metabolites (XML)" ; dcterms:description "Feces metabolites subset (XML)" ; schema1:url . kgr:hmdb.xml.metabolites.saliva a schema1:Product ; rdfs:label "HMDB Saliva Metabolites (XML)" ; dcterms:description "Saliva metabolites subset (XML)" ; schema1:url . kgr:hmdb.xml.metabolites.serum a schema1:Product ; rdfs:label "HMDB Serum Metabolites (XML)" ; dcterms:description "Serum metabolites subset (XML)" ; schema1:url . kgr:hmdb.xml.metabolites.sweat a schema1:Product ; rdfs:label "HMDB Sweat Metabolites (XML)" ; dcterms:description "Sweat metabolites subset (XML)" ; schema1:url . kgr:hmdb.xml.metabolites.urine a schema1:Product ; rdfs:label "HMDB Urine Metabolites (XML)" ; dcterms:description "Urine metabolites subset (XML)" ; schema1:url . kgr:hmdb.xml.proteins a schema1:Product ; rdfs:label "HMDB All Proteins (XML)" ; dcterms:description "All proteins dataset (XML)" ; schema1:url . kgr:hom.owl a schema1:OntologyProduct ; rdfs:label "hom.owl" ; dcterms:description "Homology Ontology in OWL format" ; schema1:url . kgr:homologene.data a schema1:Product ; rdfs:label "HomoloGene Data File (Build 68 - Archive)" ; dcterms:description "Tab-delimited file containing HomoloGene group IDs, taxonomy IDs, gene IDs, gene symbols, and protein accessions for the final build 68 (2014)" ; schema1:url . kgr:homologene.ftp_archive a schema1:DocumentationProduct ; rdfs:label "HomoloGene FTP Archive" ; dcterms:description "Complete FTP archive of all HomoloGene builds from build 35 (2004) through build 68 (2014), retained for historical purposes" ; schema1:url . kgr:homologene.xml a schema1:Product ; rdfs:label "HomoloGene XML Data (Build 68 - Archive)" ; dcterms:description "XML dump of the HomoloGene build 68 containing detailed homology group information, gene and protein links, and distance analysis results" ; schema1:url . kgr:hp.genes_to_phenotype.txt a schema1:OntologyProduct ; rdfs:label "HPO gene to phenotype annotations" ; dcterms:description "https://hpo.jax.org/app/data/annotations" ; schema1:url . kgr:hp.hp-base.json a schema1:OntologyProduct ; rdfs:label "HPO base release in obographs JSON format" ; dcterms:description "Manually curated version of the ontology without the use of a reasoner, with references to imported terms, in obographs JSON file format." ; schema1:url . kgr:hp.hp-base.obo a schema1:OntologyProduct ; rdfs:label "HPO base release in OBO format" ; dcterms:description "Manually curated version of the ontology without the use of a reasoner, with references to imported terms, in OBO file format." ; schema1:url . kgr:hp.hp-base.owl a schema1:OntologyProduct ; rdfs:label "HPO base release in OWL format" ; dcterms:description "Manually curated version of the ontology without the use of a reasoner, with references to imported terms, in OWL (RDF/XML) file format." ; schema1:url . kgr:hp.hp-full.json a schema1:OntologyProduct ; rdfs:label "HPO full release in obographs JSON format" ; dcterms:description "Version of the ontology automatically classified with the use of a reasoner, including all imported terms, in obographs JSON file format." ; schema1:url . kgr:hp.hp-full.obo a schema1:OntologyProduct ; rdfs:label "HPO full release in OBO format" ; dcterms:description "Version of the ontology automatically classified with the use of a reasoner, including all imported terms, in OBO file format." ; schema1:url . kgr:hp.hp-full.owl a schema1:OntologyProduct ; rdfs:label "HPO full release in OWL format" ; dcterms:description "Version of the ontology automatically classified with the use of a reasoner, including all imported terms, in OWL (RDF/XML) file format." ; schema1:url . kgr:hp.hp-international.json a schema1:OntologyProduct ; rdfs:label "HPO International Edition in obographs JSON format" ; dcterms:description "Version of the ontology corresponding to the primary release (hp.owl), with translated labels, synonyms, and definitions, in obographs JSON file format." ; schema1:url . kgr:hp.hp-international.obo a schema1:OntologyProduct ; rdfs:label "HPO International Edition in OBO format" ; dcterms:description "Version of the ontology corresponding to the primary release (hp.owl), with translated labels, synonyms, and definitions, in OBO file format." ; schema1:url . kgr:hp.hp-international.owl a schema1:OntologyProduct ; rdfs:label "HPO International Edition in OWL format" ; dcterms:description "Version of the ontology corresponding to the primary release (hp.owl), with translated labels, synonyms, and definitions, in OWL (RDF/XML) file format." ; schema1:url . kgr:hp.hp-simple-non-classified.json a schema1:OntologyProduct ; rdfs:label "HPO simple, manually classified, without imports in obographs JSON format" ; dcterms:description "Simple, manually curated version of the ontology without the use of a reasoner, and without any imported terms, in obographs JSON file format." ; schema1:url . kgr:hp.hp-simple-non-classified.obo a schema1:OntologyProduct ; rdfs:label "HPO simple, manually classified, without imports in OBO format" ; dcterms:description "Simple, manually curated version of the ontology without the use of a reasoner, and without any imported terms, in OBO file format." ; schema1:url . kgr:hp.hp-simple-non-classified.owl a schema1:OntologyProduct ; rdfs:label "HPO simple, manually classified, without imports in OWL format" ; dcterms:description "Simple, manually curated version of the ontology without the use of a reasoner, and without any imported terms, in OWL (RDF/XML) file format." ; schema1:url . kgr:hp.json a schema1:OntologyProduct ; rdfs:label "Official HPO release in obographs JSON format" ; dcterms:description "Simple, manually curated version of the ontology without the use of a reasoner, and without any imported terms, in obographs JSON format." ; schema1:url . kgr:hp.obo a schema1:OntologyProduct ; rdfs:label "Official HPO release in OBO format" ; dcterms:description "Simple, manually curated version of the ontology without the use of a reasoner, and without any imported terms, in OBO file format." ; schema1:url . kgr:hp.owl a schema1:OntologyProduct ; rdfs:label "Official HPO release in OWL" ; dcterms:description "Manually classified version of the ontology without the use of a reasoner, with imported terms, in OWL format (RDF/XML)." ; schema1:url . kgr:hp.phenotype.hpoa a schema1:OntologyProduct ; rdfs:label "HPO Annotations (Phenotype to Disease)" ; dcterms:description "https://hpo.jax.org/app/data/annotations" ; schema1:url . kgr:hp.phenotype_to_genes.txt a schema1:OntologyProduct ; rdfs:label "HPO phenotype to gene annotations" ; dcterms:description "https://hpo.jax.org/app/data/annotations" ; schema1:url . kgr:hpa.api.json a schema1:ProgrammingInterface ; rdfs:label "HPA JSON API" ; dcterms:description "Programmatic access to individual protein entries in JSON format via Ensembl ID" ; schema1:url . kgr:hpa.api.rdf a schema1:ProgrammingInterface ; rdfs:label "HPA RDF API" ; dcterms:description "Programmatic access to individual protein entries in RDF format via Ensembl ID" ; schema1:url . kgr:hpa.api.tsv a schema1:ProgrammingInterface ; rdfs:label "HPA TSV API" ; dcterms:description "Programmatic access to individual protein entries in TSV format via Ensembl ID" ; schema1:url . kgr:hpa.api.xml a schema1:ProgrammingInterface ; rdfs:label "HPA XML API" ; dcterms:description "Programmatic access to individual protein entries in XML format via Ensembl ID" ; schema1:url . kgr:hpa.blood_protein a schema1:Product ; rdfs:label "HPA Blood Protein Data" ; dcterms:description "Blood protein expression data from healthy individuals and disease states" ; schema1:url . kgr:hpa.brain_rna a schema1:Product ; rdfs:label "HPA Brain RNA Expression Data" ; dcterms:description "Brain-specific expression data including regional and cellular distribution" ; schema1:url . kgr:hpa.normal_tissue a schema1:Product ; rdfs:label "HPA Normal Tissue Data" ; dcterms:description "Normal tissue expression data based on immunohistochemistry using tissue microarrays" ; schema1:url . kgr:hpa.pathology a schema1:Product ; rdfs:label "HPA Pathology Data" ; dcterms:description "Pathology data including cancer tissue expression and patient survival information" ; schema1:url . kgr:hpa.portal a schema1:GraphicalInterface ; rdfs:label "Human Protein Atlas Portal" ; dcterms:description "Main web portal for exploring protein expression profiles across tissues, cells, and disease states" ; schema1:url . kgr:hpa.proteinatlas.json a schema1:Product ; rdfs:label "HPA Complete Data (JSON)" ; dcterms:description "Complete Human Protein Atlas data in JSON format, version 24.1" ; schema1:url . kgr:hpa.proteinatlas.tsv a schema1:Product ; rdfs:label "HPA Complete Data (TSV)" ; dcterms:description "Complete Human Protein Atlas data in TSV format, version 24.1" ; schema1:url . kgr:hpa.proteinatlas.xml a schema1:Product ; rdfs:label "HPA Complete Data (XML)" ; dcterms:description "Complete Human Protein Atlas data in XML format, version 24.0 with comprehensive protein expression and annotation data" ; schema1:url . kgr:hpa.rna_celline a schema1:Product ; rdfs:label "HPA RNA Cell Line Expression Data" ; dcterms:description "RNA expression data in human cell lines based on RNA-seq analysis" ; schema1:url . kgr:hpa.rna_immune_cell a schema1:Product ; rdfs:label "HPA Immune Cell RNA Data" ; dcterms:description "Immune cell expression data from single cell transcriptomics studies" ; schema1:url . kgr:hpa.rna_single_cell a schema1:Product ; rdfs:label "HPA Single Cell RNA Expression Data" ; dcterms:description "Single cell expression data from human tissues based on scRNA-seq analysis" ; schema1:url . kgr:hpa.rna_tissue a schema1:Product ; rdfs:label "HPA RNA Tissue Expression Data" ; dcterms:description "RNA expression data in human tissues based on transcriptomic analysis" ; schema1:url . kgr:hpa.subcellular_location a schema1:Product ; rdfs:label "HPA Subcellular Location Data" ; dcterms:description "Subcellular localization data based on immunofluorescent staining of human cell lines" ; schema1:url . kgr:hprd.genprot.viewer a schema1:GraphicalInterface ; rdfs:label "GenProt Viewer" ; dcterms:description "GenProt Viewer for integrated genomic, transcriptomic and proteomic view of the human genome" ; schema1:url . kgr:hprd.phosphomotif.finder a schema1:GraphicalInterface ; rdfs:label "HPRD PhosphoMotif Finder" ; dcterms:description "PhosphoMotif Finder tool for identifying kinase/phosphatase substrate and binding motifs" ; schema1:url . kgr:hprd.ppi.data a schema1:Product ; rdfs:label "HPRD Protein-Protein Interactions" ; dcterms:description "HPRD protein-protein interaction data in PSI-MITAB format, now archived and available through iRefIndex" ; schema1:url . kgr:hprd.tsv.download a schema1:DocumentationProduct ; rdfs:label "HPRD Tab-Delimited Data Download" ; dcterms:description "HPRD data in tab-delimited format for programmatic access" ; schema1:url . kgr:hprd.xml.download a schema1:DocumentationProduct ; rdfs:label "HPRD XML Data Download" ; dcterms:description "HPRD data in XML format for programmatic access" ; schema1:url . kgr:hra-kg.graph.json a schema1:GraphProduct ; rdfs:label "HRA KG graph data, v2.2, JSON-LD format" ; dcterms:description "The graph representation of the Human Reference Atlas (HRA) dataset, v2.2, JSON-LD format" ; schema1:url . kgr:hra-kg.graph.nq a schema1:GraphProduct ; rdfs:label "HRA KG graph data, v2.2, N-Quads format" ; dcterms:description "The graph representation of the Human Reference Atlas (HRA) dataset, v2.2, N-Quads format" ; schema1:url . kgr:hra-kg.graph.nt a schema1:GraphProduct ; rdfs:label "HRA KG graph data, v2.2, N-Triples format" ; dcterms:description "The graph representation of the Human Reference Atlas (HRA) dataset, v2.2, N-Triples format" ; schema1:url . kgr:hra-kg.graph.ttl a schema1:GraphProduct ; rdfs:label "HRA KG graph data, v2.2, Turtle format" ; dcterms:description "The graph representation of the Human Reference Atlas (HRA) dataset, v2.2, Turtle format" ; schema1:url . kgr:hra-kg.graph.xml a schema1:GraphProduct ; rdfs:label "HRA KG graph data, v2.2, RDF/XML format" ; dcterms:description "The graph representation of the Human Reference Atlas (HRA) dataset, v2.2, RDF/XML format" ; schema1:url . kgr:hra.api a schema1:ProgrammingInterface ; rdfs:label "HRA API" ; dcterms:description "API endpoints for programmatic access to HRA data" ; schema1:url . kgr:hra.data a schema1:Product ; rdfs:label "HRA Data Downloads" ; dcterms:description "Downloadable data files including anatomical structures, cell types, and biomarkers" ; schema1:url . kgr:hra.portal a schema1:GraphicalInterface ; rdfs:label "Human Reference Atlas Portal" ; dcterms:description "Web portal for exploring and visualizing the Human Reference Atlas" ; schema1:url . kgr:hrpimp.data a schema1:Product ; rdfs:label "HuRI Protein-Protein Interaction Data" ; dcterms:description "TSV files containing systematically mapped binary protein-protein interactions for 9,094 human proteins with 64,006 validated interactions" ; schema1:url . kgr:hrpimp.web a schema1:GraphicalInterface ; rdfs:label "Interactome Atlas Web Portal" ; dcterms:description "Web interface for browsing and exploring the Human Reference Interactome" ; schema1:url . kgr:hsapdv.obo a schema1:OntologyProduct ; rdfs:label "hsapdv.obo" ; dcterms:description "Human Developmental Stages in OBO format" ; schema1:url . kgr:hsapdv.owl a schema1:OntologyProduct ; rdfs:label "hsapdv.owl" ; dcterms:description "Human Developmental Stages in OWL format" ; schema1:url . kgr:hso.owl a schema1:OntologyProduct ; rdfs:label "hso.owl" ; dcterms:description "Health Surveillance Ontology in OWL format" ; schema1:url . kgr:htn.owl a schema1:OntologyProduct ; rdfs:label "HTN" ; dcterms:description "HTN" ; schema1:url . kgr:hubmap.antibody_validation_reports a schema1:Product ; rdfs:label "Antibody Validation Reports" ; dcterms:description "Antibody validation reports for multiplex imaging assays" ; schema1:url . kgr:hubmap.azimuth a schema1:GraphicalInterface ; rdfs:label "Azimuth" ; dcterms:description "Single-cell RNA-seq and ATAC-seq analysis using reference datasets" ; schema1:url . kgr:hubmap.data_ingest_portal a schema1:Product ; rdfs:label "Data Ingest Portal" ; dcterms:description "Data submission portal for registering and ingesting consortium data" ; schema1:url . kgr:hubmap.data_portal a schema1:Product ; rdfs:label "HuBMAP Data Portal" ; dcterms:description "HuBMAP Data Portal providing access to standardized single-cell and spatial tissue data from human donors" ; schema1:url . kgr:hubmap.fusion a schema1:GraphicalInterface ; rdfs:label "FUSION" ; dcterms:description "Functional Unit State Identification and Navigation with Whole Slide Imaging" ; schema1:url . kgr:hubmap.human_reference_atlas a schema1:Product ; rdfs:label "Human Reference Atlas" ; dcterms:description "Human Reference Atlas providing atlas data and reference functionality" ; schema1:url . kgr:hubmap.vitessce a schema1:GraphicalInterface ; rdfs:label "Vitessce" ; dcterms:description "Interactive data visualization tool for spatial and single-cell multimodal datasets" ; schema1:url . kgr:hubmap.workspaces a schema1:GraphicalInterface ; rdfs:label "HuBMAP Workspaces" ; dcterms:description "Interactive JupyterLab environments for analyzing HuBMAP data" ; schema1:url . kgr:humannet.api a schema1:ProgrammingInterface ; rdfs:label "HumanNet API" ; dcterms:description "API for programmatic access to HumanNet data" ; schema1:url . kgr:humannet.network a schema1:GraphProduct ; rdfs:label "HumanNet Network File" ; dcterms:description "Downloadable functional gene network with confidence scores" ; schema1:url . kgr:humannet.web a schema1:GraphicalInterface ; rdfs:label "HumanNet Web Interface" ; dcterms:description "Web interface for querying and visualizing the HumanNet functional gene network" ; schema1:url . kgr:huri.interactions a schema1:Product ; rdfs:label "HuRI Protein-Protein Interactions" ; dcterms:description "Human Reference Interactome (HuRI) protein-protein interaction data" ; schema1:url . kgr:huri.literature_benchmark a schema1:Product ; rdfs:label "HuRI Literature Benchmark" ; dcterms:description "Literature-curated high-quality protein-protein interactions from comparable experimental approaches" ; schema1:url . kgr:huri.portal a schema1:GraphicalInterface ; rdfs:label "HuRI Web Portal" ; dcterms:description "Web portal for searching and browsing human protein interactions" ; schema1:url . kgr:hydrologykg.sparql a schema1:ProgrammingInterface ; rdfs:label "SAWGraph Hydrology KG SPARQL" ; dcterms:description "SPARQL endpoint for SAWGraph Hydrology KG" ; schema1:url . kgr:iao.d-acts.owl a schema1:OntologyProduct ; rdfs:label "ontology of document acts" ; dcterms:description "An ontology based on a theory of document acts describing what people can do with documents" ; schema1:url . kgr:iao.dev.iao.owl a schema1:OntologyProduct ; rdfs:label "IAO dev" ; dcterms:description "IAO dev" ; schema1:url . kgr:iao.ontology-metadata.owl a schema1:OntologyProduct ; rdfs:label "IAO ontology metadata" ; dcterms:description "IAO ontology metadata" ; schema1:url . kgr:iao.owl a schema1:OntologyProduct ; rdfs:label "iao.owl" ; dcterms:description "Information Artifact Ontology in OWL format" ; schema1:url . kgr:icd10.browser a schema1:GraphicalInterface ; rdfs:label "ICD-10 Browser" ; dcterms:description "Web-based browser for exploring the ICD-10 classification hierarchy and codes" ; schema1:url . kgr:icd10.downloads a schema1:Product ; rdfs:label "ICD-10 Downloads" ; dcterms:description "Official ICD-10 classification files and documentation available for download" ; schema1:url . kgr:icd10.training a schema1:DocumentationProduct ; rdfs:label "ICD-10 Training" ; dcterms:description "Training materials and courses for learning ICD-10 coding and classification" ; schema1:url . kgr:icd10cm.tool a schema1:GraphicalInterface ; rdfs:label "ICD-10-CM Browser Tool" ; dcterms:description "Interactive web-based search tool for ICD-10-CM codes" ; schema1:url . kgr:iceo.owl a schema1:OntologyProduct ; rdfs:label "iceo.owl" ; dcterms:description "Integrative and Conjugative Element Ontology in OWL format" ; schema1:url . kgr:ico.owl a schema1:OntologyProduct ; rdfs:label "ico.owl" ; dcterms:description "Informed Consent Ontology in OWL format" ; schema1:url . kgr:ido.owl a schema1:OntologyProduct ; rdfs:label "ido.owl" ; dcterms:description "Infectious Disease Ontology in OWL format" ; schema1:url . kgr:idomal.obo a schema1:OntologyProduct ; rdfs:label "idomal.obo" ; dcterms:description "Malaria Ontology in OBO format" ; schema1:url . kgr:idomal.owl a schema1:OntologyProduct ; rdfs:label "idomal.owl" ; dcterms:description "Malaria Ontology in OWL format" ; schema1:url . kgr:ikraph.code a schema1:ProcessProduct ; rdfs:label "iKraph Code" ; dcterms:description "Code for named entity recognition, relation extraction, and drug repurposing in assembly and analysis of iKraph" ; schema1:url . kgr:ikraph.graph a schema1:GraphProduct ; rdfs:label "iKraph graph metadata" ; dcterms:description "Graph metadata for iKraph, including a list of relations, entity type-specific metadata, data sources, and drug repurposing predictions." ; schema1:url . kgr:ikraph.graphdata a schema1:GraphProduct ; rdfs:label "iKraph graph data" ; dcterms:description "Complete graph data for iKraph with all entities and relations extracted from PubMed abstracts" ; schema1:url . kgr:ikraph.site a schema1:GraphicalInterface ; rdfs:label "BioKDE" ; dcterms:description "Biomedical Knowledge Discovery Engine. Interface for iKraph with search, visualization, and exploration capabilities." ; schema1:url . kgr:imodulondb.browser a schema1:GraphicalInterface ; rdfs:label "iModulonDB Web Interface" ; dcterms:description "Interactive web interface for browsing and analyzing iModulons across 15 prokaryotic organisms with 22 datasets, 1924 curated iModulons, and 9576 expression profiles. Includes organism-specific dataset pages, iModulon dashboards, gene search functionality, and project information pages displaying experimental conditions and publication abstracts." ; schema1:url . kgr:imodulondb.datasets a schema1:Product ; rdfs:label "iModulonDB Datasets" ; dcterms:description "Downloadable transcriptomic datasets and iModulon decompositions for 15 organisms including E. coli, B. subtilis, S. aureus, M. tuberculosis, P. aeruginosa, P. putida, and others. Includes gene expression matrices, iModulon activity matrices, gene weights, and metadata for over 9500 expression profiles from 525 studies." ; schema1:url . kgr:imodulondb.imodulonminer a schema1:Product ; rdfs:label "iModulonMiner Pipeline" ; dcterms:description "Computational pipeline for gathering publicly available RNA-seq data, aligning reads, performing quality control, computing iModulons using independent component analysis, and formatting dashboard files. Enables users to generate their own iModulon decompositions from transcriptomic datasets." ; schema1:url . kgr:imodulondb.modulome_workflow a schema1:Product ; rdfs:label "Modulome Workflow" ; dcterms:description "Modulome workflow for scraping publicly available data for an organism, aligning reads, quality control, and computing iModulons. Used to expand iModulonDB across the prokaryotic evolutionary tree by processing data from the Sequence Read Archive." ; schema1:url . kgr:imodulondb.pymodulon a schema1:ProgrammingInterface ; rdfs:label "PyModulon Python Package" ; dcterms:description "Python package for characterization, plotting, and analysis of iModulons. Provides functions for threshold determination, transcriptional regulatory network (TRN) enrichment analysis, explained variance calculation, and generation of dashboard files for iModulonDB." ; schema1:url . kgr:inchikey.docs a schema1:DocumentationProduct ; rdfs:label "InChI/InChIKey Documentation" ; dcterms:description "InChI Trust documentation and supporting material for the InChI/InChIKey identifier standard." ; schema1:url . kgr:indra.api.cogex a schema1:ProgrammingInterface ; rdfs:label "INDRA CoGEx Query API" ; dcterms:description "REST API for INDRA CoGEx queries" ; schema1:url . kgr:indra.discovery a schema1:GraphicalInterface ; rdfs:label "INDRA Biomedical Discovery Engine" ; dcterms:description "Web interface for the INDRA Biomedical Discovery Engine" ; schema1:url . kgr:indra.python a schema1:ProcessProduct ; rdfs:label "INDRA Python Library" ; dcterms:description "Python library for automated model assembly from mechanistic knowledge" ; schema1:url . kgr:inhs a "Organization" ; rdfs:label "Illinois Natural History Survey" . kgr:innatedb.downloads a schema1:Product ; rdfs:label "InnateDB Data Downloads" ; dcterms:description "Downloadable data files for interactions, pathways, and annotations" ; schema1:url . kgr:innatedb.portal a schema1:GraphicalInterface ; rdfs:label "InnateDB Web Portal" ; dcterms:description "Web interface for searching and analyzing innate immunity genes, proteins, interactions, and pathways" ; schema1:url . kgr:ino.owl a schema1:OntologyProduct ; rdfs:label "ino.owl" ; dcterms:description "Interaction Network Ontology in OWL format" ; schema1:url . kgr:insight.portal a schema1:GraphicalInterface ; rdfs:label "INSIGHT Project Portal" ; dcterms:description "INSIGHT project web portal for project updates, consortium information, and dissemination materials." ; schema1:url . kgr:intact.datasets a schema1:Product ; rdfs:label "IntAct Datasets" ; dcterms:description "Curated and computational datasets (disease-, method-, and species-specific) with per-dataset downloads" ; schema1:url . kgr:intact.docs.user-guide a schema1:DocumentationProduct ; rdfs:label "IntAct User Guide" ; dcterms:description "User guide and documentation for search, exports, data sources, and submission" ; schema1:url . kgr:intact.ftp.psi25 a schema1:Product ; rdfs:label "IntAct PSI-MI XML 2.5" ; dcterms:description "IntAct data in PSI-MI XML 2.5 format (directory)" ; schema1:url . kgr:intact.ftp.psi30 a schema1:Product ; rdfs:label "IntAct PSI-MI XML 3.0" ; dcterms:description "IntAct data in PSI-MI XML 3.0 format (directory)" ; schema1:url . kgr:intact.ftp.psimitab a schema1:Product ; rdfs:label "IntAct PSI-MI MITAB 2.7" ; dcterms:description "IntAct data in PSI-MI MITAB format (directory)" ; schema1:url . kgr:intact.ftp.psimitab.all a schema1:Product ; rdfs:label "IntAct MITAB Archive" ; dcterms:description "Entire MITAB export of the database as a single archive (intact.zip)" ; schema1:url . kgr:intact.portal a schema1:GraphicalInterface ; rdfs:label "IntAct Portal" ; dcterms:description "Web portal for browsing, searching, and accessing IntAct molecular interaction data" ; schema1:url . kgr:interpro.api a schema1:ProgrammingInterface ; rdfs:label "InterPro API" ; dcterms:description "RESTful API for programmatic access to InterPro data" ; schema1:url . kgr:interpro.entry_list a schema1:DataModelProduct ; rdfs:label "InterPro Entry List" ; dcterms:description "Complete list of InterPro entries with their types and short names" ; schema1:url . kgr:interpro.interproscan a schema1:ProcessProduct ; rdfs:label "InterProScan" ; dcterms:description "Software package for scanning protein sequences against InterPro's signatures" ; schema1:url . kgr:interpro.match_complete a schema1:MappingProduct ; rdfs:label "InterPro Match Complete" ; dcterms:description "Complete set of matches between protein sequences and InterPro entries/signatures" ; schema1:url . kgr:interpro.parent_child_tree a schema1:DataModelProduct ; rdfs:label "Parent-Child Tree" ; dcterms:description "Hierarchical relationships between InterPro entries" ; schema1:url . kgr:interpro.protein2ipr a schema1:MappingProduct ; rdfs:label "Protein to InterPro Mappings" ; dcterms:description "Mappings of protein sequences to InterPro entries in a tab-delimited format" ; schema1:url . kgr:interpro.uniparc_match a schema1:MappingProduct ; rdfs:label "UniParc Match" ; dcterms:description "InterPro matches for UniParc protein sequences" ; schema1:url . kgr:interpro.web a schema1:GraphicalInterface ; rdfs:label "InterPro Web Interface" ; dcterms:description "Web interface for browsing and searching the InterPro database" ; schema1:url . kgr:interpro.xml a schema1:DataModelProduct ; rdfs:label "InterPro XML" ; dcterms:description "Complete InterPro database in XML format containing entries, member database signatures, GO terms, and relationships" ; schema1:url . kgr:iproclass.pir-docs a schema1:DocumentationProduct ; rdfs:label "PIR Documentation" ; dcterms:description "Protein Information Resource site with parent documentation and context for iProClass." ; schema1:url . kgr:iproclass.portal a schema1:GraphicalInterface ; rdfs:label "iProClass Portal" ; dcterms:description "Historical iProClass web interface for integrated protein annotation lookup." ; schema1:url . kgr:irefindex.irefr a schema1:Product ; rdfs:label "iRefR Package" ; dcterms:description "R package for accessing and manipulating iRefIndex data" . kgr:irefindex.irefscape a schema1:Product ; rdfs:label "iRefScape" ; dcterms:description "Cytoscape plugin for visualization and data mining of iRefIndex protein interaction data" . kgr:irefindex.irefweb a schema1:GraphicalInterface ; rdfs:label "iRefWeb" ; dcterms:description "Web interface for navigating the global protein-protein interaction landscape" . kgr:itis.api a schema1:ProgrammingInterface ; rdfs:label "ITIS REST Services" ; dcterms:description "REST JSON services providing programmatic access to taxonomic records, synonyms, hierarchy, and search utilities" ; schema1:url . kgr:itis.download a schema1:Product ; rdfs:label "ITIS Data Download Package" ; dcterms:description "Downloadable full database dump (Delorme) package containing authoritative ITIS taxonomic data" ; schema1:url . kgr:itis.portal a schema1:GraphicalInterface ; rdfs:label "ITIS Web Portal" ; dcterms:description "Web portal for browsing taxonomic records, hierarchical classification, name sources, and reports" ; schema1:url . kgr:iubmb a "Organization" ; rdfs:label "International Union of Biochemistry and Molecular Biology" . kgr:kegg.annotation a schema1:ProcessProduct ; rdfs:label "KEGG Annotation" ; dcterms:description "Tools for KO (KEGG Orthology) assignment and validation" ; schema1:url . kgr:kegg.api a schema1:ProgrammingInterface ; rdfs:label "KEGG REST API" ; dcterms:description "REST-style Application Programming Interface to the KEGG database resource" ; schema1:url . kgr:kegg.blastkoala a schema1:ProcessProduct ; rdfs:label "BlastKOALA" ; dcterms:description "BLAST-based KO annotation and KEGG mapping tool" ; schema1:url . kgr:kegg.brite a schema1:DataModelProduct ; rdfs:label "KEGG BRITE" ; dcterms:description "BRITE hierarchies and tables for functional hierarchies of biological objects" ; schema1:url . kgr:kegg.compound a schema1:Product ; rdfs:label "KEGG COMPOUND" ; dcterms:description "Collection of small molecules and biopolymers" ; schema1:url . kgr:kegg.disease a schema1:Product ; rdfs:label "KEGG DISEASE" ; dcterms:description "Collection of human diseases" ; schema1:url . kgr:kegg.drug a schema1:Product ; rdfs:label "KEGG DRUG" ; dcterms:description "Collection of drugs" ; schema1:url . kgr:kegg.genes a schema1:Product ; rdfs:label "KEGG GENES" ; dcterms:description "Gene catalogs of completely sequenced genomes" ; schema1:url . kgr:kegg.genome a schema1:Product ; rdfs:label "KEGG GENOME" ; dcterms:description "Collection of organisms with complete genome sequences" ; schema1:url . kgr:kegg.glycan a schema1:Product ; rdfs:label "KEGG GLYCAN" ; dcterms:description "Collection of glycans" ; schema1:url . kgr:kegg.mapper a schema1:ProcessProduct ; rdfs:label "KEGG Mapper" ; dcterms:description "Collection of tools for mapping molecular datasets to KEGG pathway maps, BRITE hierarchies, and modules" ; schema1:url . kgr:kegg.medicus a schema1:GraphicalInterface ; rdfs:label "KEGG MEDICUS" ; dcterms:description "Web interface for integrated drug and disease information with a focus on drug interactions and health information" ; schema1:url . kgr:kegg.module a schema1:Product ; rdfs:label "KEGG MODULE" ; dcterms:description "KEGG modules representing tighter functional units within KEGG pathways" ; schema1:url . kgr:kegg.orthology a schema1:Product ; rdfs:label "KEGG ORTHOLOGY" ; dcterms:description "KO (KEGG Orthology) groups representing ortholog groups of genes" ; schema1:url . kgr:kegg.pathway a schema1:Product ; rdfs:label "KEGG PATHWAY" ; dcterms:description "KEGG pathway maps representing molecular interaction and reaction networks" ; schema1:url . kgr:kegg.pathway.kgml a schema1:DataModelProduct ; rdfs:label "KEGG Pathway KGML" ; dcterms:description "KEGG pathway maps in KGML (KEGG Markup Language) format, an XML representation of KEGG pathway maps" ; schema1:url . kgr:kegg.reaction a schema1:Product ; rdfs:label "KEGG REACTION" ; dcterms:description "Collection of biochemical reactions" ; schema1:url . kgr:kegg.syntax a schema1:ProcessProduct ; rdfs:label "KEGG Syntax" ; dcterms:description "Tools for analyzing conserved genes, gene sets, and gene order" ; schema1:url . kgr:kegg.web a schema1:GraphicalInterface ; rdfs:label "KEGG Web Interface" ; dcterms:description "Web interface for browsing and searching the KEGG database, including pathway maps, BRITE hierarchies, and other KEGG content" ; schema1:url . kgr:kegg.webapps a schema1:GraphicalInterface ; rdfs:label "KEGG Web Apps" ; dcterms:description "Interactive web applications for KEGG pathway viewing with coloring features and other visualization tools" ; schema1:url . kgr:kg-alzheimers.graph a schema1:GraphProduct ; rdfs:label "KGX Distribution of KG-Alzheimers" ; dcterms:description "KGX Distribution of KG-Alzheimers" ; schema1:url . kgr:kg-covid-19.graph a schema1:GraphProduct ; rdfs:label "KG-COVID-19 graph" ; dcterms:description "KGX nodes and edges for KG-COVID-19" ; schema1:url . kgr:kg-ebi-gene2pheno.edges.kgx a schema1:GraphProduct ; rdfs:label "EBI gene2pheno KGX edges" ; dcterms:description "KGX edges file for EBI Gene2Phenotype KG" ; schema1:url . kgr:kg-ebi-gene2pheno.edges.trapi a schema1:GraphProduct ; rdfs:label "EBI gene2pheno TRAPI edges" ; dcterms:description "TRAPI edges file for EBI Gene2Phenotype KG" ; schema1:url . kgr:kg-ebi-gene2pheno.nodes.kgx a schema1:GraphProduct ; rdfs:label "EBI gene2pheno KGX nodes" ; dcterms:description "KGX nodes file for EBI Gene2Phenotype KG" ; schema1:url . kgr:kg-enp.portal a schema1:GraphicalInterface ; rdfs:label "ENP-KG Portal" ; dcterms:description "Web-based interactive portal for exploring experimental natural products, chemical structures, and organism relationships with data visualization" ; schema1:url . kgr:kg-idg.graph a schema1:GraphProduct ; rdfs:label "KGX Distribution of KG-IDG" ; dcterms:description "KGX Distribution of KG-IDG" ; schema1:url . kgr:kg-jensenlab-diseases.edges.kgx a schema1:GraphProduct ; rdfs:label "DISEASES KGX edges" ; dcterms:description "KGX edges file for JensenLab DISEASES KG" ; schema1:url . kgr:kg-jensenlab-diseases.edges.trapi a schema1:GraphProduct ; rdfs:label "DISEASES TRAPI edges" ; dcterms:description "TRAPI edges file for JensenLab DISEASES KG" ; schema1:url . kgr:kg-jensenlab-diseases.nodes.kgx a schema1:GraphProduct ; rdfs:label "DISEASES KGX nodes" ; dcterms:description "KGX nodes file for JensenLab DISEASES KG" ; schema1:url . kgr:kg-monarch.associations.all a schema1:Product ; rdfs:label "All Associations" ; dcterms:description "All associations from the Monarch Knowledge Graph in TSV format" ; schema1:url . kgr:kg-monarch.associations.causal_gene_to_disease a schema1:Product ; rdfs:label "Causal Gene to Disease Associations" ; dcterms:description "Causal gene to disease associations" ; schema1:url . kgr:kg-monarch.associations.chemical_or_drug_to_disease a schema1:Product ; rdfs:label "Chemical/Drug/Treatment to Disease/Phenotypic Feature Associations" ; dcterms:description "Chemical or drug or treatment to disease or phenotypic feature associations" ; schema1:url . kgr:kg-monarch.associations.chemical_to_disease a schema1:Product ; rdfs:label "Chemical to Disease/Phenotypic Feature Associations" ; dcterms:description "Chemical to disease or phenotypic feature associations" ; schema1:url . kgr:kg-monarch.associations.chemical_to_pathway a schema1:Product ; rdfs:label "Chemical to Pathway Associations" ; dcterms:description "Chemical to pathway associations" ; schema1:url . kgr:kg-monarch.associations.correlated_gene_to_disease a schema1:Product ; rdfs:label "Correlated Gene to Disease Associations" ; dcterms:description "Correlated gene to disease associations" ; schema1:url . kgr:kg-monarch.associations.disease_to_inheritance a schema1:Product ; rdfs:label "Disease/Phenotypic Feature to Genetic Inheritance Associations" ; dcterms:description "Disease or phenotypic feature to genetic inheritance associations" ; schema1:url . kgr:kg-monarch.associations.disease_to_location a schema1:Product ; rdfs:label "Disease/Phenotypic Feature to Location Associations" ; dcterms:description "Disease or phenotypic feature to location associations" ; schema1:url . kgr:kg-monarch.associations.disease_to_phenotype a schema1:Product ; rdfs:label "Disease to Phenotypic Feature Associations" ; dcterms:description "Disease to phenotypic feature associations" ; schema1:url . kgr:kg-monarch.associations.gene_to_expression_site a schema1:Product ; rdfs:label "Gene to Expression Site Associations" ; dcterms:description "Gene to expression site associations" ; schema1:url . kgr:kg-monarch.associations.gene_to_gene_homology a schema1:Product ; rdfs:label "Gene to Gene Homology Associations" ; dcterms:description "Gene to gene homology associations" ; schema1:url . kgr:kg-monarch.associations.gene_to_pathway a schema1:Product ; rdfs:label "Gene to Pathway Associations" ; dcterms:description "Gene to pathway associations" ; schema1:url . kgr:kg-monarch.associations.gene_to_phenotype a schema1:Product ; rdfs:label "Gene to Phenotypic Feature Associations" ; dcterms:description "Gene to phenotypic feature associations" ; schema1:url . kgr:kg-monarch.associations.genotype_to_disease a schema1:Product ; rdfs:label "Genotype to Disease Associations" ; dcterms:description "Genotype to disease associations" ; schema1:url . kgr:kg-monarch.associations.genotype_to_gene a schema1:Product ; rdfs:label "Genotype to Gene Associations" ; dcterms:description "Genotype to gene associations" ; schema1:url . kgr:kg-monarch.associations.genotype_to_phenotype a schema1:Product ; rdfs:label "Genotype to Phenotypic Feature Associations" ; dcterms:description "Genotype to phenotypic feature associations" ; schema1:url . kgr:kg-monarch.associations.genotype_to_variant a schema1:Product ; rdfs:label "Genotype to Variant Associations" ; dcterms:description "Genotype to variant associations" ; schema1:url . kgr:kg-monarch.associations.macromolecular_machine_to_biological_process a schema1:Product ; rdfs:label "Macromolecular Machine to Biological Process Associations" ; dcterms:description "Macromolecular machine to biological process associations" ; schema1:url . kgr:kg-monarch.associations.macromolecular_machine_to_cellular_component a schema1:Product ; rdfs:label "Macromolecular Machine to Cellular Component Associations" ; dcterms:description "Macromolecular machine to cellular component associations" ; schema1:url . kgr:kg-monarch.associations.macromolecular_machine_to_molecular_activity a schema1:Product ; rdfs:label "Macromolecular Machine to Molecular Activity Associations" ; dcterms:description "Macromolecular machine to molecular activity associations" ; schema1:url . kgr:kg-monarch.associations.pairwise_gene_to_gene_interaction a schema1:Product ; rdfs:label "Pairwise Gene to Gene Interaction Associations" ; dcterms:description "Pairwise gene to gene interaction associations" ; schema1:url . kgr:kg-monarch.associations.variant_to_disease a schema1:Product ; rdfs:label "Variant to Disease Associations" ; dcterms:description "Variant to disease associations" ; schema1:url . kgr:kg-monarch.associations.variant_to_gene a schema1:Product ; rdfs:label "Variant to Gene Associations" ; dcterms:description "Variant to gene associations" ; schema1:url . kgr:kg-monarch.associations.variant_to_phenotype a schema1:Product ; rdfs:label "Variant to Phenotypic Feature Associations" ; dcterms:description "Variant to phenotypic feature associations" ; schema1:url . kgr:kg-monarch.solr a schema1:Product ; rdfs:label "Solr Data" ; dcterms:description "Solr index data for the Monarch Knowledge Graph search functionality" ; schema1:url . kgr:kg-predict.ad_predictions a schema1:Product ; rdfs:label "AD Drug Predictions" ; dcterms:description "Alzheimer's disease case study predictions and clinical trial evidence" ; schema1:url . kgr:kg-predict.code a schema1:ProcessProduct ; rdfs:label "KG-Predict Code" ; dcterms:description "Python implementation of KG-Predict framework for graph embedding and drug repurposing prediction" ; schema1:url . kgr:kg-predict.gpkg a schema1:GraphProduct ; rdfs:label "GP-KG Knowledge Graph Data" ; dcterms:description "GP-KG knowledge graph containing 1,246,726 associations between 61,146 entities from multiple genotypic and phenotypic databases" ; schema1:url . kgr:kgcl.model.jsonld a schema1:DataModelProduct ; rdfs:label "Knowledge Graph Change Language JSON-LD Context" ; dcterms:description "JSON-LD context for the Knowledge Graph Change Language model, enabling semantic interoperability for KGCL data." ; schema1:url . kgr:kgcl.model.owl a schema1:DataModelProduct ; rdfs:label "Knowledge Graph Change Language OWL release" ; dcterms:description "OWL release of Knowledge Graph Change Language, provides a formal semantic model for representing change operations in ontologies and knowledge graphs." ; schema1:url . kgr:kgcl.model.shacl a schema1:DataModelProduct ; rdfs:label "Knowledge Graph Change Language SHACL Shapes" ; dcterms:description "SHACL shapes for validating Knowledge Graph Change Language instances." ; schema1:url . kgr:kgcl.model.yaml a schema1:DataModelProduct ; rdfs:label "Knowledge Graph Change Language YAML Schema" ; dcterms:description "YAML schema representation of the Knowledge Graph Change Language model." ; schema1:url . kgr:kgcl.python a schema1:ProcessProduct ; rdfs:label "KGCL Python Implementation" ; dcterms:description "Python implementation of the Knowledge Graph Change Language standard, including a LinkML model and LARK grammar for parsing and generating KGCL statements." ; schema1:url . kgr:kidsfirst.cavatica a schema1:GraphicalInterface ; rdfs:label "CAVATICA Platform" ; dcterms:description "Cloud-based analysis platform for Kids First data, allowing researchers to analyze and integrate genomic and clinical data in a secure environment." ; schema1:url . kgr:kidsfirst.pedcbioportal a schema1:GraphicalInterface ; rdfs:label "PedcBioPortal" ; dcterms:description "Web-based tool for exploring and visualizing pediatric cancer genomic datasets, integrated with clinical data." ; schema1:url . kgr:kidsfirst.portal a schema1:GraphicalInterface ; rdfs:label "Kids First Data Resource Portal" ; dcterms:description "Centralized platform providing access to harmonized clinical and genomic data from childhood cancer and congenital disorder cohorts, supporting cohort discovery and analysis." ; schema1:url . kgr:kinhub.kinases-list a schema1:Product ; rdfs:label "Human Protein Kinases List" ; dcterms:description "Comprehensive list of human protein kinases with unified naming scheme" ; schema1:url . kgr:kinhub.kinmap a schema1:GraphicalInterface ; rdfs:label "KinMap" ; dcterms:description "Interactive web-based tool for navigating and annotating the human kinome tree with biochemical, structural, and disease data" ; schema1:url . kgr:kinhub.portal a schema1:GraphicalInterface ; rdfs:label "KinHub Portal" ; dcterms:description "Main portal providing resources and tools for human protein kinases" ; schema1:url . kgr:kinomescan.portal a schema1:GraphicalInterface ; rdfs:label "KINOMEscan Data Portal" ; dcterms:description "Web interface providing searchable table of all small molecules profiled by KINOMEscan" ; schema1:url . kgr:kinomescan.spreadsheet a schema1:DocumentationProduct ; rdfs:label "KINOMEscan Datasets Spreadsheet" ; dcterms:description "Excel spreadsheet containing HMS LINCS KINOMEscan datasets with compound information and data links" ; schema1:url . kgr:kisao.owl a schema1:OntologyProduct ; rdfs:label "kisao.owl" ; dcterms:description "Kinetic Simulation Algorithm Ontology in OWL format" ; schema1:url . kgr:knowwheregraph.explorer a schema1:GraphicalInterface ; rdfs:label "KnowWhereGraph Knowledge Explorer" ; dcterms:description "Faceted search interface providing table and map-based views for browsing and discovering KnowWhereGraph data with automatic SPARQL query generation" ; schema1:url . kgr:knowwheregraph.graph a schema1:GraphProduct ; rdfs:label "KnowWhereGraph RDF Knowledge Graph" ; dcterms:description "KnowWhereGraph knowledge graph with 29+ billion RDF triples integrating 30+ environmental and geospatial data layers accessible through SPARQL endpoint" ; schema1:url . kgr:knowwheregraph.ontology a schema1:DocumentationProduct ; rdfs:label "KnowWhereGraph Ontology Documentation" ; dcterms:description "Comprehensive ontology documentation and reference for the KnowWhereGraph ontology with 150 classes, 70 object properties, and 75 data properties" ; schema1:url . kgr:knowwheregraph.sparql a schema1:ProgrammingInterface ; rdfs:label "KnowWhereGraph SPARQL Endpoint" ; dcterms:description "SPARQL endpoint with GeoSPARQL support for querying KnowWhereGraph data and performing geospatial queries" ; schema1:url . kgr:labo.owl a schema1:OntologyProduct ; rdfs:label "labo.owl" ; dcterms:description "clinical LABoratory Ontology in OWL format" ; schema1:url . kgr:lepao.obo a schema1:OntologyProduct ; rdfs:label "lepao.obo" ; dcterms:description "Lepidoptera Anatomy Ontology in OBO format" ; schema1:url . kgr:lepao.owl a schema1:OntologyProduct ; rdfs:label "lepao.owl" ; dcterms:description "Lepidoptera Anatomy Ontology in OWL format" ; schema1:url . kgr:lincs-l1000.clue a schema1:GraphicalInterface ; rdfs:label "CLUE Platform" ; dcterms:description "The CLUE platform provides interactive analysis tools and data access for the LINCS L1000 Connectivity Map dataset, including query tools, visualization, and APIs for programmatic access." ; schema1:url . kgr:lincs-l1000.cmap a schema1:GraphicalInterface ; rdfs:label "LINCS Connectivity Map (CMap)" ; dcterms:description "The Connectivity Map (CMap) database containing over 1.3 million L1000 gene expression profiles from chemical, genetic, and biologic perturbations. Includes web-based analysis tools for signature search and perturbagen class discovery." ; schema1:url . kgr:lincs-l1000.geo a schema1:Product ; rdfs:label "LINCS L1000 GEO Dataset" ; dcterms:description "LINCS L1000 data deposited in the Gene Expression Omnibus, including raw and processed gene expression data at multiple levels of preprocessing for all 1.3+ million profiles." ; schema1:url . kgr:lincs.api a schema1:ProgrammingInterface ; rdfs:label "LINCS API" ; dcterms:description "API for programmatic access to LINCS data and signatures." ; schema1:url . kgr:lincs.portal a schema1:GraphicalInterface ; rdfs:label "LINCS Data Portal 2.0" ; dcterms:description "Web interface that allows users to explore, analyze, and visualize LINCS signatures and datasets." ; schema1:url . kgr:litvar.api a schema1:ProgrammingInterface ; rdfs:label "LitVar API" ; dcterms:description "RESTful API providing programmatic access to variant summaries, publications, search, and gene-level variant queries" ; schema1:url . kgr:litvar.web_interface a schema1:GraphicalInterface ; rdfs:label "LitVar Web Interface" ; dcterms:description "Web interface for searching and retrieving variant information from 35+ million PubMed articles with autocomplete, filtering, and entity highlighting" ; schema1:url . kgr:lncbase.correlation-viz a schema1:Product ; rdfs:label "LncBase Correlation Visualizations" ; dcterms:description "Interactive correlation plots showing clustering of miRNA-lncRNA interactions across cell types and tissues" ; schema1:url . kgr:lncbase.expression-viz a schema1:Product ; rdfs:label "LncBase Expression Visualizations" ; dcterms:description "Interactive bar plots showing lncRNA expression profiles and subcellular localization (nucleus/cytoplasm)" ; schema1:url . kgr:lncbase.portal a schema1:GraphicalInterface ; rdfs:label "DIANA-LncBase Portal" ; dcterms:description "Main web portal for searching experimentally supported miRNA-lncRNA interactions with interactive visualizations" ; schema1:url . kgr:lncbase.ucsc-browser a schema1:Product ; rdfs:label "LncBase UCSC Browser Integration" ; dcterms:description "UCSC Genome Browser integration for visualizing miRNA binding events and variant locations on lncRNAs" ; schema1:url . kgr:lncbook.blast a schema1:GraphicalInterface ; rdfs:label "BLAST Search" ; dcterms:description "BLAST search tool for sequence similarity" ; schema1:url . kgr:lncbook.classification a schema1:GraphicalInterface ; rdfs:label "Classification Tool" ; dcterms:description "Genomic location annotation and classification tool" ; schema1:url . kgr:lncbook.conservation a schema1:GraphicalInterface ; rdfs:label "Conservation Browser" ; dcterms:description "Browse conservation features of lncRNA genes across 40 vertebrates" ; schema1:url . kgr:lncbook.conversion a schema1:GraphicalInterface ; rdfs:label "ID Conversion Tool" ; dcterms:description "ID conversion tool across 14 resources" ; schema1:url . kgr:lncbook.downloads a schema1:Product ; rdfs:label "Downloads" ; dcterms:description "Downloadable data files including gene annotations, expression profiles, and multi-omics annotations" ; schema1:url . kgr:lncbook.expression a schema1:GraphicalInterface ; rdfs:label "Expression Browser" ; dcterms:description "Browse expression profiles across 9 biological contexts (normal tissue, organ development, cell differentiation, etc.)" ; schema1:url . kgr:lncbook.interaction a schema1:GraphicalInterface ; rdfs:label "Interaction Browser" ; dcterms:description "Browse lncRNA-miRNA and lncRNA-protein interactions (146,092,274 lncRNA-miRNA and 772,745 lncRNA-protein interactions)" ; schema1:url . kgr:lncbook.lgc a schema1:GraphicalInterface ; rdfs:label "LGC Coding Potential Predictor" ; dcterms:description "LGC coding potential prediction tool" ; schema1:url . kgr:lncbook.methylation a schema1:GraphicalInterface ; rdfs:label "Methylation Browser" ; dcterms:description "Browse DNA methylation profiles in 16 diseases (14 cancers and 2 neurodevelopmental disorders)" ; schema1:url . kgr:lncbook.portal a schema1:GraphicalInterface ; rdfs:label "LncBook Portal" ; dcterms:description "Main web portal for searching and browsing human long non-coding RNAs with multi-omics annotations" ; schema1:url . kgr:lncbook.sprotein a schema1:GraphicalInterface ; rdfs:label "Small Protein Browser" ; dcterms:description "Browse 34,012 small proteins encoded by lncRNAs" ; schema1:url . kgr:lncbook.statistics a schema1:DocumentationProduct ; rdfs:label "Statistics Page" ; dcterms:description "Comprehensive database statistics and analysis results" ; schema1:url . kgr:lncbook.variation a schema1:GraphicalInterface ; rdfs:label "Variation Browser" ; dcterms:description "Browse 959,138 disease/trait-associated variants across lncRNA genes" ; schema1:url . kgr:lncipedia.downloads a schema1:Product ; rdfs:label "LncIPedia Downloads" ; dcterms:description "Downloadable database files in FASTA, GFF, and BED formats for both GRCh37/hg19 and GRCh38/hg38 genome assemblies" ; schema1:url . kgr:lncipedia.igv a schema1:Product ; rdfs:label "LncIPedia IGV Integration" ; dcterms:description "Integration files for Integrative Genomics Viewer (IGV) to visualize lncRNA annotations" ; schema1:url . kgr:lncipedia.metadata a schema1:Product ; rdfs:label "LncIPedia Metadata" ; dcterms:description "Metadata files including locus conservation across species (chimpanzee, mouse, Drosophila, zebrafish) and conversion tables to Ensembl and RefSeq IDs" ; schema1:url . kgr:lncipedia.search a schema1:GraphicalInterface ; rdfs:label "LncIPedia Search" ; dcterms:description "Web interface for searching and browsing human lncRNA sequences and annotations" ; schema1:url . kgr:lncipedia.trackhub a schema1:GraphicalInterface ; rdfs:label "LncIPedia UCSC Trackhub" ; dcterms:description "UCSC Genome Browser trackhub for directly displaying LncIPedia annotations" ; schema1:url . kgr:lncrnadb.export a schema1:Product ; rdfs:label "Export Results" ; dcterms:description "Tab-delimited file download of search results" ; schema1:url . kgr:lncrnadb.nred-integration a schema1:GraphicalInterface ; rdfs:label "NRED Integration" ; dcterms:description "Integration with Noncoding RNA Expression Database (NRED) for expression information from various sources" . kgr:lncrnadb.portal a schema1:GraphicalInterface ; rdfs:label "lncRNAdb Portal" ; dcterms:description "Main web portal for searching and browsing long noncoding RNAs by name, sequence, species, or annotations" ; schema1:url . kgr:lncrnadb.search a schema1:GraphicalInterface ; rdfs:label "Search Interface" ; dcterms:description "Search interface supporting queries by lncRNA name or alias, nucleotide sequence string, species, annotation status, and full-text search" ; schema1:url . kgr:lncrnadb.submit a schema1:DocumentationProduct ; rdfs:label "User Submission System" ; dcterms:description "User submission interface for adding new entries and updating existing data with published information" . kgr:lncrnadb.ucsc-integration a schema1:GraphicalInterface ; rdfs:label "UCSC Genome Browser Integration" ; dcterms:description "Integration with UCSC Genome Browser for genomic context visualization" . kgr:lncrnalyzr.api a schema1:ProgrammingInterface ; rdfs:label "lncRNAlyzr API" ; dcterms:description "RESTful API for programmatic access to lncRNA annotations, interactions, and functional predictions" ; schema1:url . kgr:lncrnalyzr.graph a schema1:GraphProduct ; rdfs:label "lncRNAlyzr Knowledge Graph" ; dcterms:description "Neo4j knowledge graph containing lncRNAs, protein-coding genes, regulatory interactions, and disease associations" . kgr:lncrnalyzr.portal a schema1:GraphicalInterface ; rdfs:label "lncRNAlyzr Explorer" ; dcterms:description "Interactive web platform for exploring lncRNA networks with expression visualization and functional analysis tools" ; schema1:url . kgr:loinc.api.fhir a schema1:ProgrammingInterface ; rdfs:label "LOINC FHIR API" ; dcterms:description "HL7 FHIR-based API providing programmatic access to LOINC terminology content (requires free LOINC login)" ; schema1:url . kgr:loinc.archive a schema1:DataModelProduct ; rdfs:label "LOINC Release Archive" ; dcterms:description "Archive of past LOINC releases for version-specific implementations" ; schema1:url . kgr:loinc.complete a schema1:DataModelProduct ; rdfs:label "LOINC Complete Release" ; dcterms:description "Complete LOINC release archive (table and accessory files) downloadable after free registration" ; schema1:url . kgr:loinc.principles a schema1:DocumentationProduct ; rdfs:label "LOINC Principles Document" ; dcterms:description "LOINC Mission, Vision, and Guiding Principles for open terminology development (CC-BY 4.0 licensed document)" ; schema1:url . kgr:loinc.web a schema1:GraphicalInterface ; rdfs:label "LOINC Website & Browsers" ; dcterms:description "Web-based tools including SearchLOINC and Hierarchy Browser for interactive exploration of LOINC content (free login required)" ; schema1:url . kgr:ma.obo a schema1:OntologyProduct ; rdfs:label "ma.obo" ; dcterms:description "Mouse adult gross anatomy in OBO format" ; schema1:url . kgr:ma.owl a schema1:OntologyProduct ; rdfs:label "ma.owl" ; dcterms:description "Mouse adult gross anatomy in OWL format" ; schema1:url . kgr:maastricht-ids a "Organization" ; rdfs:label "Maastricht University Institute of Data Science" . kgr:malacards.archive a schema1:DocumentationProduct ; rdfs:label "MalaCards Previous Version Archive" ; dcterms:description "Access to previous versions of the MalaCards database." ; schema1:url . kgr:malacards.categories a schema1:GraphicalInterface ; rdfs:label "MalaCards Disease Categories" ; dcterms:description "Browse diseases by global categories (cancer, genetic, rare, etc.) and anatomical categories (neuronal, cardiovascular, etc.)." ; schema1:url . kgr:malacards.portal a schema1:GraphicalInterface ; rdfs:label "MalaCards Web Portal" ; dcterms:description "Searchable web interface for exploring human diseases with integrated data on genes, symptoms, drugs, mutations, clinical trials and more." ; schema1:url . kgr:malacards.search a schema1:GraphicalInterface ; rdfs:label "MalaCards Advanced Search" ; dcterms:description "Advanced search interface for querying diseases by multiple criteria." ; schema1:url . kgr:mamo.owl a schema1:OntologyProduct ; rdfs:label "mamo.owl" ; dcterms:description "Mathematical modeling ontology in OWL format" ; schema1:url . kgr:mangal.api a schema1:ProgrammingInterface ; rdfs:label "mangal.io API" ; dcterms:description "RESTful API for programmatic access to network data and metadata" ; schema1:url . kgr:mangal.docs a schema1:DocumentationProduct ; rdfs:label "mangal.io Documentation" ; dcterms:description "API documentation, user guides, and data model specification" ; schema1:url . kgr:mangal.portal a schema1:GraphicalInterface ; rdfs:label "mangal.io Web Portal" ; dcterms:description "Web interface for browsing, querying, and visualizing ecological networks" ; schema1:url . kgr:maxo.json a schema1:OntologyProduct ; rdfs:label "maxo.json" ; dcterms:description "Medical Action Ontology in JSON format" ; schema1:url . kgr:maxo.maxo-base.json a schema1:OntologyProduct ; rdfs:label "maxo.maxo-base.json" ; dcterms:description "Medical Action Ontology in JSON format" ; schema1:url . kgr:maxo.maxo-base.obo a schema1:OntologyProduct ; rdfs:label "maxo.maxo-base.obo" ; dcterms:description "Medical Action Ontology in OBO format" ; schema1:url . kgr:maxo.maxo-base.owl a schema1:OntologyProduct ; rdfs:label "maxo.maxo-base.owl" ; dcterms:description "Medical Action Ontology in OWL format" ; schema1:url . kgr:maxo.obo a schema1:OntologyProduct ; rdfs:label "maxo.obo" ; dcterms:description "Medical Action Ontology in OBO format" ; schema1:url . kgr:maxo.owl a schema1:OntologyProduct ; rdfs:label "maxo.owl" ; dcterms:description "Medical Action Ontology in OWL format" ; schema1:url . kgr:mco.obo a schema1:OntologyProduct ; rdfs:label "mco.obo" ; dcterms:description "Microbial Conditions Ontology in OBO format" ; schema1:url . kgr:mco.owl a schema1:OntologyProduct ; rdfs:label "mco.owl" ; dcterms:description "Microbial Conditions Ontology in OWL format" ; schema1:url . kgr:mcro.owl a schema1:OntologyProduct ; rdfs:label "mcro.owl" ; dcterms:description "Model Card Report Ontology in OWL format" ; schema1:url . kgr:mechreponet.code rdfs:label "MechRepoNet Code" ; dcterms:description "Python code for building and analyzing the MechRepoNet knowledge graph" ; schema1:url . kgr:medgen.csv a schema1:Product ; rdfs:label "CSV Data Files" ; dcterms:description "CSV format data files directory with additional data exports" ; schema1:url . kgr:medgen.cui-history a schema1:Product ; rdfs:label "MedGen CUI History" ; dcterms:description "History file tracking changes to MedGen CUIs" ; schema1:url . kgr:medgen.faq a schema1:DocumentationProduct ; rdfs:label "FAQ" ; dcterms:description "Frequently asked questions about MedGen" ; schema1:url . kgr:medgen.help a schema1:DocumentationProduct ; rdfs:label "MedGen Documentation" ; dcterms:description "Documentation, help pages, and user guides for MedGen" ; schema1:url . kgr:medgen.hpo-history a schema1:Product ; rdfs:label "HPO CUI History" ; dcterms:description "History file tracking changes to HPO term mappings to CUIs" ; schema1:url . kgr:medgen.hpo-mapping a schema1:MappingProduct ; rdfs:label "MedGen HPO Mapping" ; dcterms:description "Mappings between MedGen and Human Phenotype Ontology terms with gzip compression" ; schema1:url . kgr:medgen.hpo-omim-mapping a schema1:MappingProduct ; rdfs:label "MedGen HPO OMIM Mapping" ; dcterms:description "Combined mappings between MedGen, HPO, and OMIM with gzip compression" ; schema1:url . kgr:medgen.id-mappings a schema1:MappingProduct ; rdfs:label "MedGen ID Mappings" ; dcterms:description "Mappings between MedGen CUIs and external source identifiers with gzip compression" ; schema1:url . kgr:medgen.merged a schema1:Product ; rdfs:label "MERGED (Merged CUIs)" ; dcterms:description "Merged CUI mappings showing concept consolidations with gzip compression" ; schema1:url . kgr:medgen.mgconso a schema1:Product ; rdfs:label "MGCONSO (Concept Names)" ; dcterms:description "Rich Rich Format file containing concept names and source identifiers with gzip compression" ; schema1:url . kgr:medgen.mgdef a schema1:Product ; rdfs:label "MGDEF (Definitions)" ; dcterms:description "Rich Rich Format file containing definitions and descriptions with gzip compression" ; schema1:url . kgr:medgen.mgrel a schema1:MappingProduct ; rdfs:label "MGREL (Relationships)" ; dcterms:description "Rich Rich Format file containing relationships between concepts with gzip compression" ; schema1:url . kgr:medgen.mgsat a schema1:Product ; rdfs:label "MGSAT (Attributes)" ; dcterms:description "Rich Rich Format file containing attributes and properties with gzip compression" ; schema1:url . kgr:medgen.mgsty a schema1:Product ; rdfs:label "MGSTY (Semantic Types)" ; dcterms:description "Rich Rich Format file containing semantic type assignments with gzip compression" ; schema1:url . kgr:medgen.mondo-history a schema1:Product ; rdfs:label "Mondo CUI History" ; dcterms:description "History file tracking changes to Mondo term mappings to CUIs" ; schema1:url . kgr:medgen.names a schema1:Product ; rdfs:label "NAMES" ; dcterms:description "Rich Rich Format file containing concept names for search with gzip compression" ; schema1:url . kgr:medgen.ordo-history a schema1:Product ; rdfs:label "ORDO CUI History" ; dcterms:description "History file tracking changes to Orphanet term mappings to CUIs" ; schema1:url . kgr:medgen.portal a schema1:GraphicalInterface ; rdfs:label "MedGen Portal" ; dcterms:description "Main web portal for searching and browsing conditions, phenotypes, and findings in humans related to medical genetics" ; schema1:url . kgr:medgen.pubmed-links a schema1:Product ; rdfs:label "MedGen PubMed Links" ; dcterms:description "Links between MedGen concepts and PubMed articles with gzip compression" ; schema1:url . kgr:medgen.readme a schema1:DocumentationProduct ; rdfs:label "README" ; dcterms:description "README file with detailed information about FTP data files and formats" ; schema1:url . kgr:medgen.search a schema1:GraphicalInterface ; rdfs:label "Advanced Search" ; dcterms:description "Advanced search interface with support for queries by name, related gene, clinical feature, and other criteria" ; schema1:url . kgr:medgen.sources a schema1:Product ; rdfs:label "MedGen Sources" ; dcterms:description "Information about source databases and their contributions to MedGen" ; schema1:url . kgr:medi.github a schema1:Product ; rdfs:label "MEDI GitHub Repository" ; dcterms:description "GitHub repository containing the MEDI dataset, extraction pipelines, and processing code for drug indications and contraindications" ; schema1:url . kgr:medi.release a schema1:Product ; rdfs:label "MEDI Dataset Releases" ; dcterms:description "Latest release of the MEDI dataset containing curated drug-indication and drug-contraindication mappings" ; schema1:url . kgr:medkb.site a schema1:GraphicalInterface ; rdfs:label "MedKG Site" ; dcterms:description "Graphical interface for MedKG" ; schema1:url . kgr:medlineplus.connect_api a schema1:ProgrammingInterface ; rdfs:label "MedlinePlus Connect API" ; dcterms:description "MedlinePlus Connect API enabling electronic health record systems and patient portals to link patients to relevant MedlinePlus health information based on their diagnoses and medications" ; schema1:url . kgr:medlineplus.genetics_api a schema1:ProgrammingInterface ; rdfs:label "MedlinePlus Genetics API" ; dcterms:description "API and data files for retrieving genetic condition and gene information from MedlinePlus Genetics in XML or JSON format" ; schema1:url . kgr:medlineplus.web_service a schema1:ProgrammingInterface ; rdfs:label "MedlinePlus Web Service" ; dcterms:description "Web service providing search-based health topic data in XML format for integration with external applications" ; schema1:url . kgr:medlineplus.website a schema1:GraphicalInterface ; rdfs:label "MedlinePlus Website" ; dcterms:description "Main MedlinePlus website providing consumer-friendly health information organized into health topics, medical encyclopedia, drug information, medical tests, and genetics resources in English and Spanish" ; schema1:url . kgr:medlineplus.xml_files a schema1:Product ; rdfs:label "MedlinePlus XML Data Files" ; dcterms:description "Downloadable XML files containing complete records for all English and Spanish health topics on MedlinePlus" ; schema1:url . kgr:mesh.api.eutilities a schema1:ProgrammingInterface ; rdfs:label "MeSH E-utilities API" ; dcterms:description "E-utilities API for programmatic access to MeSH data through NCBI's Entrez system." ; schema1:url . kgr:mesh.api.rdf a schema1:ProgrammingInterface ; rdfs:label "MeSH RDF API" ; dcterms:description "SPARQL endpoint and REST API for querying MeSH RDF data with semantic web technologies." ; schema1:url . kgr:mesh.ascii a schema1:OntologyProduct ; rdfs:label "MeSH ASCII Data" ; dcterms:description "MeSH data in ASCII text format containing descriptors, qualifiers, and supplemental concept records. Updated annually with daily SCR updates." ; schema1:url . kgr:mesh.browser a schema1:GraphicalInterface ; rdfs:label "MeSH Browser" ; dcterms:description "The official MeSH Browser for searching and browsing the Medical Subject Headings vocabulary. Provides hierarchical navigation and term details." ; schema1:url . kgr:mesh.documentation a schema1:DocumentationProduct ; rdfs:label "MeSH Documentation and Tutorials" ; dcterms:description "Comprehensive documentation about MeSH including tutorials, webinars, and user guides for understanding and using the vocabulary." ; schema1:url . kgr:mesh.marc a schema1:OntologyProduct ; rdfs:label "MeSH MARC 21 Data" ; dcterms:description "MeSH data in MARC 21 bibliographic format for library systems. Posted monthly." ; schema1:url . kgr:mesh.ondemand a schema1:Product ; rdfs:label "MeSH on Demand" ; dcterms:description "MeSH on Demand service for suggesting MeSH terms for text or citations. Helps identify appropriate subject headings for indexing." ; schema1:url . kgr:mesh.rdf a schema1:OntologyProduct ; rdfs:label "MeSH RDF Data" ; dcterms:description "MeSH data in RDF (Resource Description Framework) format for semantic web applications. Updated daily Monday through Friday." ; schema1:url . kgr:mesh.sparql.editor a schema1:GraphicalInterface ; rdfs:label "MeSH SPARQL Query Editor" ; dcterms:description "SPARQL query editor interface for interactive querying of MeSH data using semantic web query language." ; schema1:url . kgr:mesh.xml a schema1:OntologyProduct ; rdfs:label "MeSH XML Data" ; dcterms:description "MeSH data in XML format containing descriptors, qualifiers, and supplemental concept records. Updated annually with daily updates for SCRs." ; schema1:url . kgr:metanetx.mnxref.metabolites a schema1:Product ; rdfs:label "MetaNetX MNXref Metabolites" ; dcterms:description "MNXref unified namespace for metabolites across databases" ; schema1:url . kgr:metanetx.mnxref.reactions a schema1:Product ; rdfs:label "MetaNetX MNXref Reactions" ; dcterms:description "MNXref unified namespace for reactions across databases" ; schema1:url . kgr:metanetx.rdf a schema1:Product ; rdfs:label "MetaNetX RDF Data" ; dcterms:description "RDF version of the MetaNetX data for semantic web applications" ; schema1:url . kgr:metanetx.site a schema1:GraphicalInterface ; rdfs:label "MetaNetX Web Interface" ; dcterms:description "Web interface for exploring and analyzing metabolic networks" ; schema1:url . kgr:metanetx.sparql a schema1:ProgrammingInterface ; rdfs:label "MetaNetX SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying MetaNetX RDF data" ; schema1:url . kgr:metpo.owl a schema1:OntologyProduct ; rdfs:label "METPO OWL" ; dcterms:description "METPO ontology in OWL format" ; schema1:url . kgr:mf.owl a schema1:OntologyProduct ; rdfs:label "mf.owl" ; dcterms:description "Mental Functioning Ontology in OWL format" ; schema1:url . kgr:mfmo.owl a schema1:OntologyProduct ; rdfs:label "mfmo.owl" ; dcterms:description "Mammalian Feeding Muscle Ontology in OWL format" ; schema1:url . kgr:mfo.owl a schema1:OntologyProduct ; rdfs:label "mfo.owl" ; dcterms:description "Medaka fish anatomy and development in OWL format" ; schema1:url . kgr:mfoem.owl a schema1:OntologyProduct ; rdfs:label "mfoem.owl" ; dcterms:description "Emotion Ontology in OWL format" ; schema1:url . kgr:mfomd.owl a schema1:OntologyProduct ; rdfs:label "mfomd.owl" ; dcterms:description "Mental Disease Ontology in OWL format" ; schema1:url . kgr:mgd.downloads a schema1:Product ; rdfs:label "MGD Data Downloads" ; dcterms:description "Downloadable data reports including genes, markers, phenotypes, expression annotations, and orthology in various formats" ; schema1:url . kgr:mgd.gxd a schema1:GraphicalInterface ; rdfs:label "Gene Expression Database (GXD)" ; dcterms:description "Gene Expression Database documenting spatiotemporal gene expression patterns during mouse development and adulthood" ; schema1:url . kgr:mgd.mousemine a schema1:ProgrammingInterface ; rdfs:label "MouseMine" ; dcterms:description "MouseMine data mining platform providing programmatic access to MGD data through InterMine query interface" ; schema1:url . kgr:mgd.portal a schema1:GraphicalInterface ; rdfs:label "MGI Web Portal" ; dcterms:description "Primary web interface providing integrated access to mouse genes, phenotypes, expression data, disease models, and genome features" ; schema1:url . kgr:mgnify.api a schema1:ProgrammingInterface ; rdfs:label "MGnify REST API" ; dcterms:description "REST API for programmatic access to MGnify data, including studies, analyses, genomes, and metadata." ; schema1:url . kgr:mgnify.docs a schema1:DocumentationProduct ; rdfs:label "MGnify Documentation" ; dcterms:description "Documentation and help resources for MGnify, including user guides and API documentation." ; schema1:url . kgr:mgnify.ftp a schema1:Product ; rdfs:label "MGnify FTP Archive" ; dcterms:description "FTP archive with current and archived release files, including sequences, annotations, and genome catalogues." ; schema1:url . kgr:mgnify.genomes a schema1:Product ; rdfs:label "MGnify Genomes Catalogue" ; dcterms:description "Biome-specific microbial genome catalogues, including marine, human gut, and other environments." ; schema1:url . kgr:mgnify.portal a schema1:GraphicalInterface ; rdfs:label "MGnify Web Portal" ; dcterms:description "Web portal for searching, browsing, and analyzing microbiome and metagenomic datasets, including studies, analyses, genomes, and biomes." ; schema1:url . kgr:mgnify.proteins a schema1:Product ; rdfs:label "MGnify Proteins Database" ; dcterms:description "Protein database derived from metagenomic analyses, including protein families and annotations." ; schema1:url . kgr:mgnify.training a schema1:DocumentationProduct ; rdfs:label "MGnify Training" ; dcterms:description "On-demand and live training resources for MGnify users, including webinars and tutorials." ; schema1:url . kgr:mi.obo a schema1:OntologyProduct ; rdfs:label "mi.obo" ; dcterms:description "Molecular Interactions Controlled Vocabulary in OBO format" ; schema1:url . kgr:mi.owl a schema1:OntologyProduct ; rdfs:label "mi.owl" ; dcterms:description "Molecular Interactions Controlled Vocabulary in OWL format" ; schema1:url . kgr:miapa.owl a schema1:OntologyProduct ; rdfs:label "miapa.owl" ; dcterms:description "MIAPA Ontology in OWL format" ; schema1:url . kgr:micro.owl a schema1:OntologyProduct ; rdfs:label "micro.owl" ; dcterms:description "Ontology of Prokaryotic Phenotypic and Metabolic Characters in OWL format" ; schema1:url . kgr:mint.advanced.search a schema1:GraphicalInterface ; rdfs:label "MINT Advanced Search" ; dcterms:description "Advanced search interface for querying MINT data with field-specific searches and boolean operators." ; schema1:url . kgr:mint.mitab.all a schema1:Product ; rdfs:label "MINT MITAB Full Dataset" ; dcterms:description "Complete MINT dataset in PSI-MI MITAB 2.7 format accessible via PSICQUIC web service." ; schema1:url . kgr:mint.mitab.human a schema1:Product ; rdfs:label "MINT Human Interactions" ; dcterms:description "Human protein interactions from MINT in PSI-MI MITAB format for Homo sapiens (NCBITaxon 9606)." ; schema1:url . kgr:mint.mitab.mouse a schema1:Product ; rdfs:label "MINT Mouse Interactions" ; dcterms:description "Mouse protein interactions from MINT in PSI-MI MITAB format for Mus musculus (NCBITaxon 10090)." ; schema1:url . kgr:mint.portal a schema1:GraphicalInterface ; rdfs:label "MINT Web Portal" ; dcterms:description "Web interface for browsing, searching, and visualizing protein-protein interaction data from MINT with advanced search capabilities." ; schema1:url . kgr:mint.psicquic a schema1:ProgrammingInterface ; rdfs:label "MINT PSICQUIC Web Service" ; dcterms:description "PSICQUIC SOAP and REST web services for programmatic access to MINT data using Molecular Interactions Query Language (MIQL)." ; schema1:url . kgr:mirbase.ath-gff3 a schema1:Product ; rdfs:label "Arabidopsis (ath) Genome Coordinates" ; dcterms:description "Genome coordinates for Arabidopsis microRNAs in GFF3 format" ; schema1:url . kgr:mirbase.browse a schema1:GraphicalInterface ; rdfs:label "miRBase Browse Interface" ; dcterms:description "Browse interface for exploring microRNA entries organized by species and other criteria" ; schema1:url . kgr:mirbase.cel-gff3 a schema1:Product ; rdfs:label "C. elegans (cel) Genome Coordinates" ; dcterms:description "Genome coordinates for C. elegans microRNAs in GFF3 format" ; schema1:url . kgr:mirbase.dead a schema1:Product ; rdfs:label "miRNA.dead" ; dcterms:description "List of entries that have been removed from the database" ; schema1:url . kgr:mirbase.diff a schema1:Product ; rdfs:label "miRNA.diff" ; dcterms:description "List of changes between the last release and current release" ; schema1:url . kgr:mirbase.dme-gff3 a schema1:Product ; rdfs:label "Drosophila (dme) Genome Coordinates" ; dcterms:description "Genome coordinates for Drosophila microRNAs in GFF3 format" ; schema1:url . kgr:mirbase.dre-gff3 a schema1:Product ; rdfs:label "Zebrafish (dre) Genome Coordinates" ; dcterms:description "Genome coordinates for zebrafish microRNAs in GFF3 format" ; schema1:url . kgr:mirbase.ftp a schema1:Product ; rdfs:label "miRBase FTP Archive" ; dcterms:description "FTP archive with current release data files and previous releases" ; schema1:url . kgr:mirbase.genomic-search a schema1:GraphicalInterface ; rdfs:label "Genomic Location Search" ; dcterms:description "Search interface for finding microRNAs by genomic location coordinates" ; schema1:url . kgr:mirbase.hairpin-fa a schema1:Product ; rdfs:label "hairpin.fa" ; dcterms:description "FASTA format sequences of all microRNA hairpin precursors" ; schema1:url . kgr:mirbase.help a schema1:DocumentationProduct ; rdfs:label "miRBase Help Documentation" ; dcterms:description "Comprehensive help documentation including submission guidelines, search instructions, genome assemblies, and naming conventions" ; schema1:url . kgr:mirbase.hsa-gff3 a schema1:Product ; rdfs:label "Human (hsa) Genome Coordinates" ; dcterms:description "Genome coordinates for human microRNAs in GFF3 format" ; schema1:url . kgr:mirbase.mature-fa a schema1:Product ; rdfs:label "mature.fa" ; dcterms:description "FASTA format sequences of all mature microRNA sequences" ; schema1:url . kgr:mirbase.mirna-dat a schema1:Product ; rdfs:label "miRNA.dat" ; dcterms:description "All published microRNA data in EMBL format" ; schema1:url . kgr:mirbase.mmu-gff3 a schema1:Product ; rdfs:label "Mouse (mmu) Genome Coordinates" ; dcterms:description "Genome coordinates for mouse microRNAs in GFF3 format" ; schema1:url . kgr:mirbase.portal a schema1:GraphicalInterface ; rdfs:label "miRBase Portal" ; dcterms:description "Web portal for searching and browsing microRNA sequences by identifier, keyword, genomic location, tissue expression, or sequence" ; schema1:url . kgr:mirbase.readme a schema1:DocumentationProduct ; rdfs:label "README" ; dcterms:description "Release notes and documentation for data file formats" ; schema1:url . kgr:mirbase.rno-gff3 a schema1:Product ; rdfs:label "Rat (rno) Genome Coordinates" ; dcterms:description "Genome coordinates for rat microRNAs in GFF3 format" ; schema1:url . kgr:mirbase.tissue-search a schema1:GraphicalInterface ; rdfs:label "Tissue Expression Search" ; dcterms:description "Search interface for finding microRNAs by tissue expression patterns" ; schema1:url . kgr:mirgate.api a schema1:ProgrammingInterface ; rdfs:label "miRGate API" ; dcterms:description "REST API for programmatic access to miRNA-mRNA target prediction data" ; schema1:url . kgr:mirgate.portal a schema1:Portal ; rdfs:label "miRGate Web Portal" ; dcterms:description "Web portal for querying and browsing miRNA-mRNA target predictions for human, mouse, and rat" ; schema1:url . kgr:mirgenedb.bulk a schema1:Product ; rdfs:label "MirGeneDB Bulk Data Archive" ; dcterms:description "Bulk download ZIP archives for all microRNA gene data across species." ; schema1:url . kgr:mirgenedb.covariance a schema1:Product ; rdfs:label "MirGeneDB Covariance Models" ; dcterms:description "Downloadable covariance models for more than 700 conserved microRNA families." ; schema1:url . kgr:mirgenedb.info a schema1:DocumentationProduct ; rdfs:label "MirGeneDB Information and Help" ; dcterms:description "Documentation and information about MirGeneDB nomenclature, annotation standards, and database usage." ; schema1:url . kgr:mirgenedb.portal a schema1:GraphicalInterface ; rdfs:label "MirGeneDB Web Portal" ; dcterms:description "Web interface for browsing, searching, and exploring curated microRNA gene entries and families across 114 metazoan species." ; schema1:url . kgr:mirgenedb.reads a schema1:Product ; rdfs:label "MirGeneDB Processed Read Data" ; dcterms:description "Downloadable processed FASTA files of all read data used in MirGeneDB annotations." ; schema1:url . kgr:mirgenedb.species_downloads a schema1:Product ; rdfs:label "MirGeneDB Species-Specific Downloads" ; dcterms:description "Downloadable FASTA, GFF, BED, and tabular files for microRNA genes from individual species." ; schema1:url . kgr:mirnao.owl a schema1:OntologyProduct ; rdfs:label "mirnao.owl" ; dcterms:description "microRNA Ontology in OWL format" ; schema1:url . kgr:miro.obo a schema1:OntologyProduct ; rdfs:label "miro.obo" ; dcterms:description "Mosquito insecticide resistance in OBO format" ; schema1:url . kgr:miro.owl a schema1:OntologyProduct ; rdfs:label "miro.owl" ; dcterms:description "Mosquito insecticide resistance in OWL format" ; schema1:url . kgr:mirtarbase.archive a schema1:Product ; rdfs:label "miRTarBase Previous Releases Archive" ; dcterms:description "Archive of previous miRTarBase releases for reproducibility and historical comparisons." ; schema1:url . kgr:mirtarbase.mti a schema1:Product ; rdfs:label "miRTarBase Complete MTI Dataset" ; dcterms:description "Complete dataset of microRNA-target interactions (MTI) in CSV format containing all experimentally validated interactions." ; schema1:url . kgr:mirtarbase.portal a schema1:GraphicalInterface ; rdfs:label "miRTarBase Web Portal" ; dcterms:description "Web interface for searching and browsing experimentally validated microRNA-target interactions across multiple species." ; schema1:url . kgr:mirtarbase.species_mti a schema1:Product ; rdfs:label "miRTarBase Species-Specific MTI Files" ; dcterms:description "Species-specific microRNA-target interaction datasets in CSV format for human, mouse, rat, and 25+ other species." ; schema1:url . kgr:mirtarbase.strong_evidence a schema1:Product ; rdfs:label "miRTarBase Strong Evidence Datasets" ; dcterms:description "Curated datasets filtered for strong experimental evidence including reporter assays, western blot, qPCR, and CLIP-Seq data." ; schema1:url . kgr:mirtarbase.target_sites a schema1:Product ; rdfs:label "miRTarBase Target Sites Dataset" ; dcterms:description "Dataset of microRNA target sites with detailed binding site information in CSV format." ; schema1:url . kgr:mixs.model a schema1:DataModelProduct ; rdfs:label "MIxS OWL release" ; dcterms:description "OWL release of mixs" ; schema1:url . kgr:mmo.obo a schema1:OntologyProduct ; rdfs:label "mmo.obo" ; dcterms:description "Measurement method ontology in OBO format" ; schema1:url . kgr:mmo.owl a schema1:OntologyProduct ; rdfs:label "mmo.owl" ; dcterms:description "Measurement method ontology in OWL format" ; schema1:url . kgr:mmusdv.obo a schema1:OntologyProduct ; rdfs:label "mmusdv.obo" ; dcterms:description "Mouse Developmental Stages in OBO format" ; schema1:url . kgr:mmusdv.owl a schema1:OntologyProduct ; rdfs:label "mmusdv.owl" ; dcterms:description "Mouse Developmental Stages in OWL format" ; schema1:url . kgr:mo.owl a schema1:OntologyProduct ; rdfs:label "mo.owl" ; dcterms:description "Microarray experimental conditions in OWL format" ; schema1:url . kgr:mod.obo a schema1:OntologyProduct ; rdfs:label "PSI-MOD.obo" ; dcterms:description "PSI-MOD Ontology, OBO format" ; schema1:url . kgr:mod.owl a schema1:OntologyProduct ; rdfs:label "PSI-MOD.owl" ; dcterms:description "PSI-MOD Ontology, OWL format" ; schema1:url . kgr:modomics.annotation a schema1:DocumentationProduct ; rdfs:label "MODOMICS Data Annotation Information" ; dcterms:description "Information about data annotation methods and standards used in MODOMICS." ; schema1:url . kgr:modomics.api a schema1:ProgrammingInterface ; rdfs:label "MODOMICS API" ; dcterms:description "Programmatic interface for accessing MODOMICS data." ; schema1:url . kgr:modomics.help a schema1:DocumentationProduct ; rdfs:label "MODOMICS Help Documentation" ; dcterms:description "User guide and documentation for using the MODOMICS database." ; schema1:url . kgr:modomics.images a schema1:Product ; rdfs:label "MODOMICS Modified Base Images" ; dcterms:description "Chemical structure images of modified bases for visualization and publication." ; schema1:url . kgr:modomics.mol2 a schema1:Product ; rdfs:label "MODOMICS Modified Base Structures" ; dcterms:description "Three-dimensional structures of modified bases in MOL2 format for computational chemistry applications." ; schema1:url . kgr:modomics.n3 a schema1:OntologyProduct ; rdfs:label "MODOMICS Ontology (N3)" ; dcterms:description "Ontology of base modifications in N3 format." ; schema1:url . kgr:modomics.owl a schema1:OntologyProduct ; rdfs:label "MODOMICS Ontology (OWL)" ; dcterms:description "Ontology of base modifications in OWL Lite format for semantic web applications." ; schema1:url . kgr:modomics.pdb a schema1:Product ; rdfs:label "MODOMICS PDB Modified Positions" ; dcterms:description "Modified positions in PDB structure files." ; schema1:url . kgr:modomics.portal a schema1:GraphicalInterface ; rdfs:label "MODOMICS Web Portal" ; dcterms:description "Web interface for browsing RNA modifications, pathways, reactions, sequences, proteins, and associated diseases." ; schema1:url . kgr:modomics.positions a schema1:Product ; rdfs:label "MODOMICS Modified Positions List" ; dcterms:description "Comprehensive list of modified positions in RNA sequences." ; schema1:url . kgr:modomics.sdf a schema1:Product ; rdfs:label "MODOMICS SDF Files" ; dcterms:description "Structure-data files for modified bases in SDF format." ; schema1:url . kgr:modomics.search a schema1:GraphicalInterface ; rdfs:label "MODOMICS Advanced Search" ; dcterms:description "Advanced search interface for querying modifications, pathways, sequences, and proteins." ; schema1:url . kgr:molecular-data-kp.api a schema1:ProgrammingInterface ; rdfs:label "Open API for Molecular Data KP" ; dcterms:description "Open API for Molecular Data KP" ; schema1:url . kgr:molecular-data-kp.graph.edges a schema1:GraphProduct ; rdfs:label "Edges for Molecular Data KP" ; dcterms:description "KGX edges for Molecular Data KP" ; schema1:url . kgr:molecular-data-kp.graph.nodes a schema1:GraphProduct ; rdfs:label "Nodes for Molecular Data KP" ; dcterms:description "KGX nodes for Molecular Data KP" ; schema1:url . kgr:molepro.api a schema1:ProgrammingInterface ; rdfs:label "MolePro API" ; dcterms:description "MolePro API providing access to the knowledge graph of chemical entities and biological targets" ; schema1:url . kgr:molepro.catalog a schema1:Product ; rdfs:label "MolePro Knowledge Sources Catalog" ; dcterms:description "Catalog of MolePro knowledge sources in JSON format" ; schema1:url . kgr:molepro.trapi a schema1:ProgrammingInterface ; rdfs:label "MolePro TRAPI Interface" ; dcterms:description "TRAPI-compliant interface for MolePro knowledge graph following the Translator Reasoner API standard" ; schema1:url . kgr:monarchinitiative.api a schema1:ProgrammingInterface ; rdfs:label "Monarch API" ; dcterms:description "Monarch API for programmatic access to integrated data" ; schema1:url . kgr:monarchinitiative.kg a schema1:KnowledgeGraph ; rdfs:label "Monarch Knowledge Graph" ; dcterms:description "Monarch Knowledge Graph integrating phenotype, disease, gene data across species" ; schema1:url . kgr:monarchinitiative.portal a schema1:GraphicalInterface ; rdfs:label "Monarch Web Portal" ; dcterms:description "Web interface for browsing genes, diseases, phenotypes across species" ; schema1:url . kgr:mondo.json a schema1:OntologyProduct ; rdfs:label "Mondo JSON edition" ; dcterms:description "Obographs serialization of mondo.owl." ; schema1:url . kgr:mondo.mondo-base.owl a schema1:OntologyProduct ; rdfs:label "Mondo Base Release" ; dcterms:description "The main ontology plus axioms connecting to select external ontologies, excluding the external ontologies themselves" ; schema1:url . kgr:mondo.mondo-simple.owl a schema1:OntologyProduct ; rdfs:label "Mondo Simple Release" ; dcterms:description "The main ontology classes and their hierarchies, without references to external terms." ; schema1:url . kgr:mondo.obo a schema1:OntologyProduct ; rdfs:label "Mondo OBO Format edition" ; dcterms:description "OBO serialization of mondo.owl." ; schema1:url . kgr:mondo.owl a schema1:OntologyProduct ; rdfs:label "Mondo OWL edition" ; dcterms:description "Complete ontology with merged imports." ; schema1:url . kgr:mop.owl a schema1:OntologyProduct ; rdfs:label "Molecular Process Ontology" ; dcterms:description "Molecular Process Ontology" ; schema1:url . kgr:motrpac.data-browser a schema1:GraphicalInterface ; rdfs:label "MoTrPAC Data Browser" ; dcterms:description "Interactive data browser for exploring and downloading MoTrPAC multi-omics datasets by tissue, ome, or assay type" ; schema1:url . kgr:motrpac.data-hub a schema1:GraphicalInterface ; rdfs:label "MoTrPAC Data Hub Portal" ; dcterms:description "Main portal for the MoTrPAC Data Hub providing access to data downloads, documentation, and visualization tools" ; schema1:url . kgr:motrpac.epigenomics a schema1:Product ; rdfs:label "Rat Young Adult Endurance Training - Epigenomics Data" ; dcterms:description "Epigenomics data including ATAC-seq and RRBS analyses, sample-level metadata, QC, and quantitative results across tissues" ; schema1:url . kgr:motrpac.metabolomics-targeted a schema1:Product ; rdfs:label "Rat Young Adult Endurance Training - Metabolomics (Targeted)" ; dcterms:description "Targeted metabolomics analyses, sample-level metadata, QC, and quantitative results across tissues" ; schema1:url . kgr:motrpac.metabolomics-untargeted a schema1:Product ; rdfs:label "Rat Young Adult Endurance Training - Metabolomics (Untargeted)" ; dcterms:description "Untargeted metabolomics analyses, sample-level metadata, QC, and quantitative results across tissues" ; schema1:url . kgr:motrpac.phenotype a schema1:Product ; rdfs:label "Rat Young Adult Endurance Training - Phenotype Data" ; dcterms:description "Phenotypic data from young adult rats (6-month old) that performed endurance exercise training" ; schema1:url . kgr:motrpac.proteomics-targeted a schema1:Product ; rdfs:label "Rat Young Adult Endurance Training - Proteomics (Targeted/Immunoassay)" ; dcterms:description "Targeted proteomics immunoassay data with analyses, sample-level metadata, QC, and quantitative results across tissues" ; schema1:url . kgr:motrpac.proteomics-untargeted a schema1:Product ; rdfs:label "Rat Young Adult Endurance Training - Proteomics (Untargeted)" ; dcterms:description "Untargeted proteomics data including Acetyl Proteomics, Global Proteomics, Phosphoproteomics, and Protein Ubiquitination analyses across tissues" ; schema1:url . kgr:motrpac.transcriptomics a schema1:Product ; rdfs:label "Rat Young Adult Endurance Training - Transcriptomics Data" ; dcterms:description "RNA-seq analyses, sample-level metadata, QC, and quantitative results across tissues" ; schema1:url . kgr:motrpac.video-tutorials a schema1:DocumentationProduct ; rdfs:label "MoTrPAC Data Hub Video Tutorials" ; dcterms:description "Video tutorials demonstrating how to use the MoTrPAC Data Hub and access datasets" ; schema1:url . kgr:mousemine.api a schema1:ProgrammingInterface ; rdfs:label "MouseMine API" ; dcterms:description "Programmatic access to MouseMine data via RESTful web services with client libraries for Perl, Python, Ruby, and Java" ; schema1:url . kgr:mousemine.querybuilder a schema1:GraphicalInterface ; rdfs:label "MouseMine QueryBuilder" ; dcterms:description "Custom query construction tool for building complex, iterative queries across multiple data types" ; schema1:url . kgr:mousemine.templates a schema1:GraphicalInterface ; rdfs:label "MouseMine Query Templates" ; dcterms:description "Pre-built query templates for common data retrieval tasks covering genome features, proteins, expression, interactions, phenotypes, diseases, and more" ; schema1:url . kgr:mousemine.web a schema1:GraphicalInterface ; rdfs:label "MouseMine Web Interface" ; dcterms:description "Web-based interface for searching, querying, and analyzing mouse data from MGI through MouseMine" ; schema1:url . kgr:mp.json a schema1:OntologyProduct ; rdfs:label "MP (obographs JSON edition)" ; dcterms:description "For a description of the format see https://github.com/geneontology/obographs." ; schema1:url . kgr:mp.mp-base.owl a schema1:OntologyProduct ; rdfs:label "MP Base Module" ; dcterms:description "The main ontology plus axioms connecting to select external ontologies, excluding axioms from the the external ontologies themselves." ; schema1:url . kgr:mp.obo a schema1:OntologyProduct ; rdfs:label "MP (OBO edition)" ; dcterms:description "A direct translation of the MP (OWL edition) into OBO format." ; schema1:url . kgr:mp.owl a schema1:OntologyProduct ; rdfs:label "MP (OWL edition)" ; dcterms:description "The main ontology in OWL. Contains all MP terms and links to other OBO ontologies." ; schema1:url . kgr:mpath.owl a schema1:OntologyProduct ; rdfs:label "mpath.owl" ; dcterms:description "Mouse pathology ontology in OWL format" ; schema1:url . kgr:mpio.owl a schema1:OntologyProduct ; rdfs:label "mpio.owl" ; dcterms:description "Minimum PDDI Information Ontology in OWL format" ; schema1:url . kgr:mrbase.api a schema1:ProgrammingInterface ; rdfs:label "MR-Base REST API" ; dcterms:description "RESTful API providing programmatic access to harmonized GWAS summary statistics, LD proxy lookup, instruments, and MR result generation" ; schema1:url . kgr:mrbase.home a schema1:GraphicalInterface ; rdfs:label "MR-Base Website" ; dcterms:description "Web home and informational landing page for MR-Base platform components and publications" ; schema1:url . kgr:mrbase.mrinstruments a schema1:ProgrammingInterface ; rdfs:label "MRInstruments R Package" ; dcterms:description "MRInstruments R package containing curated instruments (top hits) across multiple GWAS and QTL sources for instrument selection" ; schema1:url . kgr:mrbase.paper.reproducibility a schema1:DocumentationProduct ; rdfs:label "MR-Base Methods Paper Reproducibility Code" ; dcterms:description "Methods paper analysis reproduction code repository for MR-Base platform publication" ; schema1:url . kgr:mrbase.phewas a schema1:GraphicalInterface ; rdfs:label "MR-Base PheWAS Application" ; dcterms:description "Phenome-wide association study (PheWAS) web interface enabling exploration of SNP-trait associations and hypothesis-free MR scans" ; schema1:url . kgr:mrbase.twosamplemr a schema1:ProgrammingInterface ; rdfs:label "TwoSampleMR R Package" ; dcterms:description "TwoSampleMR R package supporting data extraction, harmonization, instrument selection, MR analysis methods, diagnostics, and reproducible code generation" ; schema1:url . kgr:mrbase.twosamplemr.docs a schema1:DocumentationProduct ; rdfs:label "TwoSampleMR Documentation" ; dcterms:description "TwoSampleMR package documentation with function reference, usage guides, and methodological notes" ; schema1:url . kgr:mrbase.webapp a schema1:GraphicalInterface ; rdfs:label "MR-Base Web Application" ; dcterms:description "Interactive Shiny-based web application for performing two-sample Mendelian randomization analyses using curated GWAS summary datasets" ; schema1:url . kgr:mro.owl a schema1:OntologyProduct ; rdfs:label "mro.owl" ; dcterms:description "MHC Restriction Ontology in OWL format" ; schema1:url . kgr:ms.obo a schema1:OntologyProduct ; rdfs:label "ms.obo" ; dcterms:description "Mass spectrometry ontology in OBO format" ; schema1:url . kgr:ms.owl a schema1:OntologyProduct ; rdfs:label "ms.owl" ; dcterms:description "Mass spectrometry ontology in OWL format" ; schema1:url . kgr:msigdb.browser a schema1:GraphicalInterface ; rdfs:label "MSigDB Web Browser" ; dcterms:description "Web interface for browsing, searching, and investigating gene sets across all MSigDB collections" ; schema1:url . kgr:msigdb.downloads.human a schema1:Product ; rdfs:label "MSigDB Human Gene Sets Downloads" ; dcterms:description "Downloadable gene set files in GMT, XML, and other formats for human collections including hallmarks, curated pathways, ontologies, and computational signatures" ; schema1:url . kgr:msigdb.downloads.mouse a schema1:Product ; rdfs:label "MSigDB Mouse Gene Sets Downloads" ; dcterms:description "Downloadable gene set files for mouse collections including mouse-ortholog hallmarks, curated pathways, ontologies, and cell type signatures" ; schema1:url . kgr:msigdb.gene_families a schema1:GraphicalInterface ; rdfs:label "MSigDB Gene Families Tool" ; dcterms:description "Tool for categorizing gene set members by gene families" ; schema1:url . kgr:msigdb.investigate a schema1:GraphicalInterface ; rdfs:label "MSigDB Investigate Tool" ; dcterms:description "Interactive tool for computing overlaps between user-provided gene sets and MSigDB collections" ; schema1:url . kgr:mskcc a "Organization" ; rdfs:label "Memorial Sloan Kettering Cancer Center" . kgr:multiomics-kp.code a schema1:ProcessProduct ; rdfs:label "Multiomics KP Source Code" ; dcterms:description "Source repository for deployment and integration code used by the Multiomics Provider team." ; schema1:url . kgr:multiomics-kp.docs a schema1:DocumentationProduct ; rdfs:label "Multiomics KP Documentation" ; dcterms:description "Team overview and interface links for the Multiomics Provider." ; schema1:url . kgr:namsnetwork.portal a schema1:GraphicalInterface ; rdfs:label "NAMs Network Portal" ; dcterms:description "NAMs Network web interface for exploring and searching New Approach Methodologies for chemical and material safety assessment" ; schema1:url . kgr:nanopublications.portal a schema1:GraphicalInterface ; rdfs:label "Nanopublications Browser" ; dcterms:description "Web interface for browsing and searching nanopublications" ; schema1:url . kgr:nanopublications.servers a schema1:ProgrammingInterface ; rdfs:label "Nanopublication Server Network" ; dcterms:description "Decentralized server network for storing and retrieving nanopublications" ; schema1:url . kgr:nasa-gesdisc-kg.sparql a schema1:ProgrammingInterface ; rdfs:label "NASA-GESDISC-KG SPARQL" ; dcterms:description "SPARQL endpoint for NASA-GESDISC-KG" ; schema1:url . kgr:naturalis a "Organization" ; rdfs:label "Naturalis Biodiversity Center" . kgr:nbo.owl a schema1:OntologyProduct ; rdfs:label "nbo.owl" ; dcterms:description "Neuro Behavior Ontology in OWL format" ; schema1:url . kgr:ncats-rampdb a "Organization" ; rdfs:label "NCATS RaMP-DB Team" . kgr:ncatsgardkg.code a schema1:ProcessProduct ; rdfs:label "NCATS GARD KG Source Repository" ; dcterms:description "RD-Clust source repository implementing NCATS GARD KG clustering and analysis workflows." ; schema1:url . kgr:ncatsgardkg.raw-data a schema1:Product ; rdfs:label "NCATS GARD KG Raw Data Directory" ; dcterms:description "Repository subdirectory containing raw datasets used to construct the NCATS GARD KG workflow." ; schema1:url . kgr:ncbigene.gene2accession a schema1:MappingProduct ; rdfs:label "Gene to Accession Mapping" ; dcterms:description "Gene to accession mapping data providing links between gene records and nucleotide/protein sequence accessions" ; schema1:url . kgr:ncbigene.gene_group a schema1:Product ; rdfs:label "Gene Group Data" ; dcterms:description "Gene group information defining functional gene families and clusters" ; schema1:url . kgr:ncbigene.gene_history a schema1:Product ; rdfs:label "Gene History Data" ; dcterms:description "Gene history data tracking changes and updates to gene records over time" ; schema1:url . kgr:ncbigene.gene_info a schema1:Product ; rdfs:label "Gene Information" ; dcterms:description "Comprehensive gene information including symbols, names, locations, and other metadata" ; schema1:url . kgr:ncbigene.gene_neighbors a schema1:Product ; rdfs:label "Gene Neighbors Data" ; dcterms:description "Gene neighbor information showing genomic proximity relationships" ; schema1:url . kgr:ncbigene.gene_orthologs a schema1:Product ; rdfs:label "Gene Orthologs Data" ; dcterms:description "Gene ortholog information showing evolutionary relationships between genes across species" ; schema1:url . kgr:ncbigene.gene_summary a schema1:Product ; rdfs:label "Gene Summary Data" ; dcterms:description "Gene summary information providing brief descriptions of gene function" ; schema1:url . kgr:ncbigene.search a schema1:GraphicalInterface ; rdfs:label "NCBI Gene Search Interface" ; dcterms:description "Web-based search and browsing interface for the NCBI Gene database" ; schema1:url . kgr:ncbitaxon.json a schema1:OntologyProduct ; rdfs:label "OBOGraphs JSON version of Main release" ; dcterms:description "OBOGraphs JSON version of Main release" ; schema1:url . kgr:ncbitaxon.obo a schema1:OntologyProduct ; rdfs:label "OBO Format version of Main release" ; dcterms:description "OBO Format version of Main release" ; schema1:url . kgr:ncbitaxon.owl a schema1:OntologyProduct ; rdfs:label "Main release" ; dcterms:description "Main release" ; schema1:url . kgr:ncbitaxon.subsets.taxslim-disjoint-over-in-taxon.owl a schema1:OntologyProduct ; rdfs:label "taxslim disjointness axioms" ; dcterms:description "taxslim disjointness axioms" ; schema1:url . kgr:ncbitaxon.subsets.taxslim.owl a schema1:OntologyProduct ; rdfs:label "taxslim" ; dcterms:description "taxslim" ; schema1:url . kgr:ncit.obo a schema1:OntologyProduct ; rdfs:label "NCIt OBO Edition OBO format" ; dcterms:description "NCIt OBO Edition OBO format" ; schema1:url . kgr:ncit.owl a schema1:OntologyProduct ; rdfs:label "NCIt OBO Edition OWL format" ; dcterms:description "A direct transformation of the standard NCIt content using OBO-style term and ontology IRIs and annotation properties." ; schema1:url . kgr:ncro.dev.ncro.owl a schema1:OntologyProduct ; rdfs:label "NCRO development version" ; dcterms:description "NCRO development version" ; schema1:url . kgr:ndcd.api a schema1:ProgrammingInterface ; rdfs:label "NDC API" ; dcterms:description "REST API providing programmatic access to National Drug Code data through the openFDA platform" ; schema1:url . kgr:ndcd.excel a schema1:Product ; rdfs:label "NDC Database Excel File" ; dcterms:description "Downloadable database file in Excel format containing finished drug product information" ; schema1:url . kgr:ndcd.search a schema1:GraphicalInterface ; rdfs:label "NDC Directory Search" ; dcterms:description "Web-based search interface for the NDC Directory allowing users to search and browse National Drug Code information" ; schema1:url . kgr:ndcd.text a schema1:Product ; rdfs:label "NDC Database Text File" ; dcterms:description "Downloadable database file in text format containing finished drug product information, updated daily" ; schema1:url . kgr:nde.sparql a schema1:ProgrammingInterface ; rdfs:label "NIAID Data Ecosystem KG SPARQL" ; dcterms:description "SPARQL endpoint for NIAID Data Ecosystem KG" ; schema1:url . kgr:neo.model a schema1:Product ; rdfs:label "neo OWL release" ; dcterms:description "OWL release of neo" ; schema1:url . kgr:ngbo.owl a schema1:OntologyProduct ; rdfs:label "ngbo.owl" ; dcterms:description "Next Generation Biobanking Ontology in OWL format" ; schema1:url . kgr:nihreporter.abstracts a schema1:Product ; rdfs:label "NIH-Funded Project Abstracts" ; dcterms:description "Database of abstracts linked to NIH-funded research projects" ; schema1:url . kgr:nihreporter.api a schema1:ProgrammingInterface ; rdfs:label "NIH Reporter API" ; dcterms:description "API access to NIH research project data and search functionality" ; schema1:url . kgr:nihreporter.clinicalstudies a schema1:Product ; rdfs:label "NIH-Funded Project Clinical Studies" ; dcterms:description "Database of clinical studies linked to NIH-funded research projects" ; schema1:url . kgr:nihreporter.linktables a schema1:Product ; rdfs:label "NIH-Funded Publications Link Tables" ; dcterms:description "Database of publication link tables for NIH-funded research projects" ; schema1:url . kgr:nihreporter.patents a schema1:Product ; rdfs:label "NIH-Funded Project Patents" ; dcterms:description "Database of patents linked to NIH-funded research projects" ; schema1:url . kgr:nihreporter.portal a schema1:GraphicalInterface ; rdfs:label "NIH Reporter Web Portal" ; dcterms:description "Web-based search interface for exploring NIH-funded research projects with advanced search capabilities" ; schema1:url . kgr:nihreporter.projects a schema1:Product ; rdfs:label "NIH Reporter Exporter Projects" ; dcterms:description "Bulk download of NIH research project data in structured format" ; schema1:url . kgr:nihreporter.publications a schema1:Product ; rdfs:label "NIH-Funded Publications Database" ; dcterms:description "Database of publications linked to NIH-funded research projects" ; schema1:url . kgr:nikg.sparql a schema1:ProgrammingInterface ; rdfs:label "Neighborhood Information KG SPARQL" ; dcterms:description "SPARQL endpoint for Neighborhood Information KG" ; schema1:url . kgr:nlm-ckn.schema a schema1:DataModelProduct ; rdfs:label "nlm-ckn-schema" ; dcterms:description "Data model for cell phenotypes and biological entities they relate to." ; schema1:url . kgr:nmr.owl a schema1:OntologyProduct ; rdfs:label "nmr.owl" ; dcterms:description "NMR-instrument specific component of metabolomics investigations in OWL format" ; schema1:url . kgr:nomen.owl a schema1:OntologyProduct ; rdfs:label "NOMEN" ; dcterms:description "core ontology" ; schema1:url . kgr:noncode.blast a schema1:GraphicalInterface ; rdfs:label "BLAST Similarity Search" ; dcterms:description "Find similar sequences using BLAST alignment" ; schema1:url . kgr:noncode.browse a schema1:GraphicalInterface ; rdfs:label "Browse NONCODE" ; dcterms:description "Browse lncRNAs by species and RNA type" ; schema1:url . kgr:noncode.conservation a schema1:GraphicalInterface ; rdfs:label "Conservation Analysis" ; dcterms:description "Cross-species conservation analysis for plant lncRNAs" ; schema1:url . kgr:noncode.disease a schema1:GraphicalInterface ; rdfs:label "Disease Information" ; dcterms:description "Browse disease-related lncRNA information, especially cancer associations" ; schema1:url . kgr:noncode.download a schema1:Product ; rdfs:label "Download Data" ; dcterms:description "Download complete lncRNA annotations and sequences" ; schema1:url . kgr:noncode.function a schema1:GraphicalInterface ; rdfs:label "Function Prediction" ; dcterms:description "Predicted functions for plant lncRNAs based on co-expression analysis" ; schema1:url . kgr:noncode.genome-browser a schema1:GraphicalInterface ; rdfs:label "Genome Browser" ; dcterms:description "View transcript locations in genomic context (human hg38)" ; schema1:url . kgr:noncode.id-conversion a schema1:GraphicalInterface ; rdfs:label "ID Conversion Tool" ; dcterms:description "Convert between NONCODE IDs and other database identifiers (Ensembl, RefSeq, etc.)" ; schema1:url . kgr:noncode.portal a schema1:GraphicalInterface ; rdfs:label "NONCODE Web Portal" ; dcterms:description "Main web interface for searching, browsing, and analyzing lncRNA annotations across 39 species" ; schema1:url . kgr:noncode.search a schema1:GraphicalInterface ; rdfs:label "Search Gene/Transcript" ; dcterms:description "Search for specific genes or transcripts by identifier or keywords" ; schema1:url . kgr:np-kg.graph.networkx a schema1:GraphProduct ; rdfs:label "NP-KG gpickle" ; dcterms:description "Merged KG with ontology-grounded KG and literature-based graph as NetworkX multidigraph object" ; schema1:url . kgr:np-kg.graph.tsv a schema1:GraphProduct ; rdfs:label "NP-KG TSV" ; dcterms:description "Merged KG with ontology-grounded KG and literature-based graph as TSV file" ; schema1:url . kgr:nsides.awaredx a schema1:Product ; rdfs:label "AwareDX" ; dcterms:description "Drug safety signals with differential risk between men and women, covering 20,817 adverse drug effects with sex-specific risks" ; schema1:url . kgr:nsides.kidsides a schema1:Product ; rdfs:label "KidSIDES" ; dcterms:description "Pediatric drug safety signals across developmental phases, covering adverse events specific to children" ; schema1:url . kgr:nsides.kidsides.code a schema1:ProcessProduct ; rdfs:label "KidSIDES Code" ; dcterms:description "Code repository for KidSIDES pediatric adverse drug event database study" ; schema1:url . kgr:nsides.onsides a schema1:Product ; rdfs:label "OnSIDES" ; dcterms:description "Adverse drug events extracted from FDA drug labels using fine-tuned PubMedBERT, covering 3.6M+ drug-ADE pairs for 2,793 drug ingredients from 46,686 labels" ; schema1:url . kgr:nsides.onsides.code a schema1:ProcessProduct ; rdfs:label "OnSIDES Code" ; dcterms:description "Code repository for OnSIDES model training and data generation" ; schema1:url . kgr:nsides.pdsportal a schema1:GraphicalInterface ; rdfs:label "PDSPortal" ; dcterms:description "Interactive RShiny web portal for browsing pediatric drug safety signals" ; schema1:url . kgr:oae.owl a schema1:OntologyProduct ; rdfs:label "oae.owl" ; dcterms:description "Ontology of Adverse Events in OWL format" ; schema1:url . kgr:oarcs.owl a schema1:OntologyProduct ; rdfs:label "oarcs.owl" ; dcterms:description "Ontology of Arthropod Circulatory Systems in OWL format" ; schema1:url . kgr:oba.obo a schema1:OntologyProduct ; rdfs:label "oba.obo" ; dcterms:description "Ontology of Biological Attributes in OBO format" ; schema1:url . kgr:oba.owl a schema1:OntologyProduct ; rdfs:label "oba.owl" ; dcterms:description "Ontology of Biological Attributes in OWL format" ; schema1:url . kgr:oba.subsets.oba-basic.obo a schema1:OntologyProduct ; rdfs:label "oba.subsets.oba-basic.obo" ; dcterms:description "Ontology of Biological Attributes in OBO format" ; schema1:url . kgr:obcs.owl a schema1:OntologyProduct ; rdfs:label "obcs.owl" ; dcterms:description "Ontology of Biological and Clinical Statistics in OWL format" ; schema1:url . kgr:obi.obi-base.owl a schema1:OntologyProduct ; rdfs:label "OBI Base module" ; dcterms:description "Base module for OBI" ; schema1:url . kgr:obi.obi_core.owl a schema1:OntologyProduct ; rdfs:label "OBI Core" ; dcterms:description "A collection of important high-level terms and their relations from OBI and other ontologies" ; schema1:url . kgr:obi.obo a schema1:OntologyProduct ; rdfs:label "OBI in OBO" ; dcterms:description "The OBO-format version of OBI" ; schema1:url . kgr:obi.owl a schema1:OntologyProduct ; rdfs:label "OBI" ; dcterms:description "The full version of OBI in OWL format" ; schema1:url . kgr:obib.owl a schema1:OntologyProduct ; rdfs:label "obib.owl" ; dcterms:description "Ontology for Biobanking in OWL format" ; schema1:url . kgr:obis.api a schema1:ProgrammingInterface ; rdfs:label "OBIS API" ; dcterms:description "RESTful API providing programmatic access to marine biodiversity records, species information, and occurrence data with filtering by taxonomy, location, depth, and time" ; schema1:url . kgr:obis.dca a schema1:Product ; rdfs:label "OBIS Darwin Core Archive Downloads" ; dcterms:description "Complete biodiversity record exports in Darwin Core Archive format containing occurrence data with standardized metadata and EML documentation" ; schema1:url . kgr:obis.geoparquet a schema1:Product ; rdfs:label "OBIS GeoParquet on AWS" ; dcterms:description "Cloud-native GeoParquet format biodiversity records available on AWS S3 for efficient large-scale spatial analysis without local downloads" ; schema1:url . kgr:obis.manual a schema1:DocumentationProduct ; rdfs:label "OBIS Manual" ; dcterms:description "Comprehensive OBIS manual covering data standards, quality control procedures, Darwin Core implementation, publication guidelines, and API usage documentation" ; schema1:url . kgr:obis.mapper a schema1:GraphicalInterface ; rdfs:label "OBIS Web Mapper" ; dcterms:description "Interactive web mapper for searching, filtering, and visualizing marine species distributions across geographic areas, depth ranges, and time periods with multi-parameter search capabilities" ; schema1:url . kgr:obis.robis a schema1:ProgrammingInterface ; rdfs:label "robis R Package" ; dcterms:description "R package robis for programmatic data access and querying of OBIS data from R environment" ; schema1:url . kgr:obis.seamap a schema1:Product ; rdfs:label "OBIS-SEAMAP Marine Megavertebrates Database" ; dcterms:description "OBIS-SEAMAP specialized database for marine megavertebrates containing distribution, abundance, and telemetry data for marine mammals, seabirds, and sea turtles" ; schema1:url . kgr:obo-db-ingest.chembl.compound.json a schema1:Product ; rdfs:label "chembl.compound OBO Graph JSON" ; dcterms:description "chembl.compound OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.chembl.compound.obo a schema1:Product ; rdfs:label "chembl.compound OBO" ; dcterms:description "chembl.compound OBO" ; schema1:url . kgr:obo-db-ingest.chembl.compound.owl a schema1:Product ; rdfs:label "chembl.compound OWL" ; dcterms:description "chembl.compound OWL" ; schema1:url . kgr:obo-db-ingest.chembl.compound.sssom.tsv a schema1:MappingProduct ; rdfs:label "chembl.compound SSSOM" ; dcterms:description "chembl.compound SSSOM" ; schema1:url . kgr:obo-db-ingest.chembl.target.json a schema1:Product ; rdfs:label "chembl.target OBO Graph JSON" ; dcterms:description "chembl.target OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.chembl.target.obo a schema1:Product ; rdfs:label "chembl.target OBO" ; dcterms:description "chembl.target OBO" ; schema1:url . kgr:obo-db-ingest.chembl.target.owl a schema1:Product ; rdfs:label "chembl.target OWL" ; dcterms:description "chembl.target OWL" ; schema1:url . kgr:obo-db-ingest.chembl.target.sssom.tsv a schema1:MappingProduct ; rdfs:label "chembl.target SSSOM" ; dcterms:description "chembl.target SSSOM" ; schema1:url . kgr:obo-db-ingest.civic.gid.json a schema1:Product ; rdfs:label "civic.gid OBO Graph JSON" ; dcterms:description "civic.gid OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.civic.gid.obo a schema1:Product ; rdfs:label "civic.gid OBO" ; dcterms:description "civic.gid OBO" ; schema1:url . kgr:obo-db-ingest.civic.gid.owl a schema1:Product ; rdfs:label "civic.gid OWL" ; dcterms:description "civic.gid OWL" ; schema1:url . kgr:obo-db-ingest.civic.gid.sssom.tsv a schema1:MappingProduct ; rdfs:label "civic.gid SSSOM" ; dcterms:description "civic.gid SSSOM" ; schema1:url . kgr:obo-db-ingest.clinicaltrials.json a schema1:Product ; rdfs:label "clinicaltrials OBO Graph JSON" ; dcterms:description "clinicaltrials OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.clinicaltrials.obo a schema1:Product ; rdfs:label "clinicaltrials OBO" ; dcterms:description "clinicaltrials OBO" ; schema1:url . kgr:obo-db-ingest.clinicaltrials.owl a schema1:Product ; rdfs:label "clinicaltrials OWL" ; dcterms:description "clinicaltrials OWL" ; schema1:url . kgr:obo-db-ingest.clinicaltrials.sssom.tsv a schema1:MappingProduct ; rdfs:label "clinicaltrials SSSOM" ; dcterms:description "clinicaltrials SSSOM" ; schema1:url . kgr:obo-db-ingest.complexportal.json a schema1:Product ; rdfs:label "complexportal OBO Graph JSON" ; dcterms:description "complexportal OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.complexportal.obo a schema1:Product ; rdfs:label "complexportal OBO" ; dcterms:description "complexportal OBO" ; schema1:url . kgr:obo-db-ingest.complexportal.owl a schema1:Product ; rdfs:label "complexportal OWL" ; dcterms:description "complexportal OWL" ; schema1:url . kgr:obo-db-ingest.complexportal.sssom.tsv a schema1:MappingProduct ; rdfs:label "complexportal SSSOM" ; dcterms:description "complexportal SSSOM" ; schema1:url . kgr:obo-db-ingest.cpt.json a schema1:Product ; rdfs:label "cpt OBO Graph JSON" ; dcterms:description "cpt OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.cpt.obo a schema1:Product ; rdfs:label "cpt OBO" ; dcterms:description "cpt OBO" ; schema1:url . kgr:obo-db-ingest.cpt.owl a schema1:Product ; rdfs:label "cpt OWL" ; dcterms:description "cpt OWL" ; schema1:url . kgr:obo-db-ingest.cpt.sssom.tsv a schema1:MappingProduct ; rdfs:label "cpt SSSOM" ; dcterms:description "cpt SSSOM" ; schema1:url . kgr:obo-db-ingest.credit.json a schema1:Product ; rdfs:label "credit OBO Graph JSON" ; dcterms:description "credit OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.credit.obo a schema1:Product ; rdfs:label "credit OBO" ; dcterms:description "credit OBO" ; schema1:url . kgr:obo-db-ingest.credit.owl a schema1:Product ; rdfs:label "credit OWL" ; dcterms:description "credit OWL" ; schema1:url . kgr:obo-db-ingest.cvx.json a schema1:Product ; rdfs:label "cvx OBO Graph JSON" ; dcterms:description "cvx OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.cvx.obo a schema1:Product ; rdfs:label "cvx OBO" ; dcterms:description "cvx OBO" ; schema1:url . kgr:obo-db-ingest.cvx.owl a schema1:Product ; rdfs:label "cvx OWL" ; dcterms:description "cvx OWL" ; schema1:url . kgr:obo-db-ingest.cvx.sssom.tsv a schema1:MappingProduct ; rdfs:label "cvx SSSOM" ; dcterms:description "cvx SSSOM" ; schema1:url . kgr:obo-db-ingest.depmap.json a schema1:Product ; rdfs:label "depmap OBO Graph JSON" ; dcterms:description "depmap OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.depmap.obo a schema1:Product ; rdfs:label "depmap OBO" ; dcterms:description "depmap OBO" ; schema1:url . kgr:obo-db-ingest.depmap.owl a schema1:Product ; rdfs:label "depmap OWL" ; dcterms:description "depmap OWL" ; schema1:url . kgr:obo-db-ingest.depmap.sssom.tsv a schema1:MappingProduct ; rdfs:label "depmap SSSOM" ; dcterms:description "depmap SSSOM" ; schema1:url . kgr:obo-db-ingest.dictybase.gene.json a schema1:Product ; rdfs:label "dictybase.gene OBO Graph JSON" ; dcterms:description "dictybase.gene OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.dictybase.gene.obo a schema1:Product ; rdfs:label "dictybase.gene OBO" ; dcterms:description "dictybase.gene OBO" ; schema1:url . kgr:obo-db-ingest.dictybase.gene.owl a schema1:Product ; rdfs:label "dictybase.gene OWL" ; dcterms:description "dictybase.gene OWL" ; schema1:url . kgr:obo-db-ingest.drugcentral.json a schema1:Product ; rdfs:label "drugcentral OBO Graph JSON" ; dcterms:description "drugcentral OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.drugcentral.obo a schema1:Product ; rdfs:label "drugcentral OBO" ; dcterms:description "drugcentral OBO" ; schema1:url . kgr:obo-db-ingest.drugcentral.owl a schema1:Product ; rdfs:label "drugcentral OWL" ; dcterms:description "drugcentral OWL" ; schema1:url . kgr:obo-db-ingest.drugcentral.sssom.tsv a schema1:MappingProduct ; rdfs:label "drugcentral SSSOM" ; dcterms:description "drugcentral SSSOM" ; schema1:url . kgr:obo-db-ingest.eccode.json a schema1:Product ; rdfs:label "eccode OBO Graph JSON" ; dcterms:description "eccode OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.eccode.obo a schema1:Product ; rdfs:label "eccode OBO" ; dcterms:description "eccode OBO" ; schema1:url . kgr:obo-db-ingest.eccode.owl a schema1:Product ; rdfs:label "eccode OWL" ; dcterms:description "eccode OWL" ; schema1:url . kgr:obo-db-ingest.eccode.sssom.tsv a schema1:MappingProduct ; rdfs:label "eccode SSSOM" ; dcterms:description "eccode SSSOM" ; schema1:url . kgr:obo-db-ingest.flybase.json a schema1:Product ; rdfs:label "flybase OBO Graph JSON" ; dcterms:description "flybase OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.flybase.obo a schema1:Product ; rdfs:label "flybase OBO" ; dcterms:description "flybase OBO" ; schema1:url . kgr:obo-db-ingest.flybase.owl a schema1:Product ; rdfs:label "flybase OWL" ; dcterms:description "flybase OWL" ; schema1:url . kgr:obo-db-ingest.gard.json a schema1:Product ; rdfs:label "gard OBO Graph JSON" ; dcterms:description "gard OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.gard.obo a schema1:Product ; rdfs:label "gard OBO" ; dcterms:description "gard OBO" ; schema1:url . kgr:obo-db-ingest.gard.owl a schema1:Product ; rdfs:label "gard OWL" ; dcterms:description "gard OWL" ; schema1:url . kgr:obo-db-ingest.geonames.feature.json a schema1:Product ; rdfs:label "geonames.feature OBO Graph JSON" ; dcterms:description "geonames.feature OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.geonames.feature.obo a schema1:Product ; rdfs:label "geonames.feature OBO" ; dcterms:description "geonames.feature OBO" ; schema1:url . kgr:obo-db-ingest.geonames.feature.owl a schema1:Product ; rdfs:label "geonames.feature OWL" ; dcterms:description "geonames.feature OWL" ; schema1:url . kgr:obo-db-ingest.geonames.json a schema1:Product ; rdfs:label "geonames OBO Graph JSON" ; dcterms:description "geonames OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.geonames.obo a schema1:Product ; rdfs:label "geonames OBO" ; dcterms:description "geonames OBO" ; schema1:url . kgr:obo-db-ingest.geonames.owl a schema1:Product ; rdfs:label "geonames OWL" ; dcterms:description "geonames OWL" ; schema1:url . kgr:obo-db-ingest.gtdb.json a schema1:Product ; rdfs:label "gtdb OBO Graph JSON" ; dcterms:description "gtdb OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.gtdb.obo a schema1:Product ; rdfs:label "gtdb OBO" ; dcterms:description "gtdb OBO" ; schema1:url . kgr:obo-db-ingest.gtdb.owl a schema1:Product ; rdfs:label "gtdb OWL" ; dcterms:description "gtdb OWL" ; schema1:url . kgr:obo-db-ingest.gtdb.sssom.tsv a schema1:MappingProduct ; rdfs:label "gtdb SSSOM" ; dcterms:description "gtdb SSSOM" ; schema1:url . kgr:obo-db-ingest.icd10.json a schema1:Product ; rdfs:label "icd10 OBO Graph JSON" ; dcterms:description "icd10 OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.icd10.obo a schema1:Product ; rdfs:label "icd10 OBO" ; dcterms:description "icd10 OBO" ; schema1:url . kgr:obo-db-ingest.icd10.owl a schema1:Product ; rdfs:label "icd10 OWL" ; dcterms:description "icd10 OWL" ; schema1:url . kgr:obo-db-ingest.icd11.json a schema1:Product ; rdfs:label "icd11 OBO Graph JSON" ; dcterms:description "icd11 OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.icd11.obo a schema1:Product ; rdfs:label "icd11 OBO" ; dcterms:description "icd11 OBO" ; schema1:url . kgr:obo-db-ingest.icd11.owl a schema1:Product ; rdfs:label "icd11 OWL" ; dcterms:description "icd11 OWL" ; schema1:url . kgr:obo-db-ingest.icd11.sssom.tsv a schema1:MappingProduct ; rdfs:label "icd11 SSSOM" ; dcterms:description "icd11 SSSOM" ; schema1:url . kgr:obo-db-ingest.mesh.json a schema1:Product ; rdfs:label "mesh OBO Graph JSON" ; dcterms:description "mesh OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.mesh.obo a schema1:Product ; rdfs:label "mesh OBO" ; dcterms:description "mesh OBO" ; schema1:url . kgr:obo-db-ingest.mesh.owl a schema1:Product ; rdfs:label "mesh OWL" ; dcterms:description "mesh OWL" ; schema1:url . kgr:obo-db-ingest.mgi.json a schema1:Product ; rdfs:label "mgi OBO Graph JSON" ; dcterms:description "mgi OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.mgi.obo a schema1:Product ; rdfs:label "mgi OBO" ; dcterms:description "mgi OBO" ; schema1:url . kgr:obo-db-ingest.mgi.owl a schema1:Product ; rdfs:label "mgi OWL" ; dcterms:description "mgi OWL" ; schema1:url . kgr:obo-db-ingest.mgi.sssom.tsv a schema1:MappingProduct ; rdfs:label "mgi SSSOM" ; dcterms:description "mgi SSSOM" ; schema1:url . kgr:obo-db-ingest.mirbase.family.json a schema1:Product ; rdfs:label "mirbase.family OBO Graph JSON" ; dcterms:description "mirbase.family OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.mirbase.family.obo a schema1:Product ; rdfs:label "mirbase.family OBO" ; dcterms:description "mirbase.family OBO" ; schema1:url . kgr:obo-db-ingest.mirbase.family.owl a schema1:Product ; rdfs:label "mirbase.family OWL" ; dcterms:description "mirbase.family OWL" ; schema1:url . kgr:obo-db-ingest.mirbase.json a schema1:Product ; rdfs:label "mirbase OBO Graph JSON" ; dcterms:description "mirbase OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.mirbase.mature.json a schema1:Product ; rdfs:label "mirbase.mature OBO Graph JSON" ; dcterms:description "mirbase.mature OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.mirbase.mature.obo a schema1:Product ; rdfs:label "mirbase.mature OBO" ; dcterms:description "mirbase.mature OBO" ; schema1:url . kgr:obo-db-ingest.mirbase.mature.owl a schema1:Product ; rdfs:label "mirbase.mature OWL" ; dcterms:description "mirbase.mature OWL" ; schema1:url . kgr:obo-db-ingest.mirbase.mature.sssom.tsv a schema1:MappingProduct ; rdfs:label "mirbase.mature SSSOM" ; dcterms:description "mirbase.mature SSSOM" ; schema1:url . kgr:obo-db-ingest.mirbase.obo a schema1:Product ; rdfs:label "mirbase OBO" ; dcterms:description "mirbase OBO" ; schema1:url . kgr:obo-db-ingest.mirbase.owl a schema1:Product ; rdfs:label "mirbase OWL" ; dcterms:description "mirbase OWL" ; schema1:url . kgr:obo-db-ingest.mirbase.sssom.tsv a schema1:MappingProduct ; rdfs:label "mirbase SSSOM" ; dcterms:description "mirbase SSSOM" ; schema1:url . kgr:obo-db-ingest.msigdb.json a schema1:Product ; rdfs:label "msigdb OBO Graph JSON" ; dcterms:description "msigdb OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.msigdb.obo a schema1:Product ; rdfs:label "msigdb OBO" ; dcterms:description "msigdb OBO" ; schema1:url . kgr:obo-db-ingest.msigdb.owl a schema1:Product ; rdfs:label "msigdb OWL" ; dcterms:description "msigdb OWL" ; schema1:url . kgr:obo-db-ingest.msigdb.sssom.tsv a schema1:MappingProduct ; rdfs:label "msigdb SSSOM" ; dcterms:description "msigdb SSSOM" ; schema1:url . kgr:obo-db-ingest.ncbi.gc.json a schema1:Product ; rdfs:label "ncbi.gc OBO Graph JSON" ; dcterms:description "ncbi.gc OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.ncbi.gc.obo a schema1:Product ; rdfs:label "ncbi.gc OBO" ; dcterms:description "ncbi.gc OBO" ; schema1:url . kgr:obo-db-ingest.ncbi.gc.owl a schema1:Product ; rdfs:label "ncbi.gc OWL" ; dcterms:description "ncbi.gc OWL" ; schema1:url . kgr:obo-db-ingest.ncbi.gc.sssom.tsv a schema1:MappingProduct ; rdfs:label "ncbi.gc SSSOM" ; dcterms:description "ncbi.gc SSSOM" ; schema1:url . kgr:obo-db-ingest.nihreporter.project.json a schema1:Product ; rdfs:label "nihreporter.project OBO Graph JSON" ; dcterms:description "nihreporter.project OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.nihreporter.project.obo a schema1:Product ; rdfs:label "nihreporter.project OBO" ; dcterms:description "nihreporter.project OBO" ; schema1:url . kgr:obo-db-ingest.nihreporter.project.owl a schema1:Product ; rdfs:label "nihreporter.project OWL" ; dcterms:description "nihreporter.project OWL" ; schema1:url . kgr:obo-db-ingest.nlm.json a schema1:Product ; rdfs:label "nlm OBO Graph JSON" ; dcterms:description "nlm OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.nlm.obo a schema1:Product ; rdfs:label "nlm OBO" ; dcterms:description "nlm OBO" ; schema1:url . kgr:obo-db-ingest.nlm.owl a schema1:Product ; rdfs:label "nlm OWL" ; dcterms:description "nlm OWL" ; schema1:url . kgr:obo-db-ingest.nlm.publisher.json a schema1:Product ; rdfs:label "nlm.publisher OBO Graph JSON" ; dcterms:description "nlm.publisher OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.nlm.publisher.obo a schema1:Product ; rdfs:label "nlm.publisher OBO" ; dcterms:description "nlm.publisher OBO" ; schema1:url . kgr:obo-db-ingest.nlm.publisher.owl a schema1:Product ; rdfs:label "nlm.publisher OWL" ; dcterms:description "nlm.publisher OWL" ; schema1:url . kgr:obo-db-ingest.nlm.sssom.tsv a schema1:MappingProduct ; rdfs:label "nlm SSSOM" ; dcterms:description "nlm SSSOM" ; schema1:url . kgr:obo-db-ingest.npass.json a schema1:Product ; rdfs:label "npass OBO Graph JSON" ; dcterms:description "npass OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.npass.obo a schema1:Product ; rdfs:label "npass OBO" ; dcterms:description "npass OBO" ; schema1:url . kgr:obo-db-ingest.npass.owl a schema1:Product ; rdfs:label "npass OWL" ; dcterms:description "npass OWL" ; schema1:url . kgr:obo-db-ingest.npass.sssom.tsv a schema1:MappingProduct ; rdfs:label "npass SSSOM" ; dcterms:description "npass SSSOM" ; schema1:url . kgr:obo-db-ingest.omim.ps.json a schema1:Product ; rdfs:label "omim.ps OBO Graph JSON" ; dcterms:description "omim.ps OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.omim.ps.obo a schema1:Product ; rdfs:label "omim.ps OBO" ; dcterms:description "omim.ps OBO" ; schema1:url . kgr:obo-db-ingest.omim.ps.owl a schema1:Product ; rdfs:label "omim.ps OWL" ; dcterms:description "omim.ps OWL" ; schema1:url . kgr:obo-db-ingest.pathbank.json a schema1:Product ; rdfs:label "pathbank OBO Graph JSON" ; dcterms:description "pathbank OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pathbank.obo a schema1:Product ; rdfs:label "pathbank OBO" ; dcterms:description "pathbank OBO" ; schema1:url . kgr:obo-db-ingest.pathbank.owl a schema1:Product ; rdfs:label "pathbank OWL" ; dcterms:description "pathbank OWL" ; schema1:url . kgr:obo-db-ingest.pathbank.sssom.tsv a schema1:MappingProduct ; rdfs:label "pathbank SSSOM" ; dcterms:description "pathbank SSSOM" ; schema1:url . kgr:obo-db-ingest.pfam.clan.json a schema1:Product ; rdfs:label "pfam.clan OBO Graph JSON" ; dcterms:description "pfam.clan OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pfam.clan.obo a schema1:Product ; rdfs:label "pfam.clan OBO" ; dcterms:description "pfam.clan OBO" ; schema1:url . kgr:obo-db-ingest.pfam.clan.owl a schema1:Product ; rdfs:label "pfam.clan OWL" ; dcterms:description "pfam.clan OWL" ; schema1:url . kgr:obo-db-ingest.pfam.json a schema1:Product ; rdfs:label "pfam OBO Graph JSON" ; dcterms:description "pfam OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pfam.obo a schema1:Product ; rdfs:label "pfam OBO" ; dcterms:description "pfam OBO" ; schema1:url . kgr:obo-db-ingest.pfam.owl a schema1:Product ; rdfs:label "pfam OWL" ; dcterms:description "pfam OWL" ; schema1:url . kgr:obo-db-ingest.pid.pathway.json a schema1:Product ; rdfs:label "pid.pathway OBO Graph JSON" ; dcterms:description "pid.pathway OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pid.pathway.obo a schema1:Product ; rdfs:label "pid.pathway OBO" ; dcterms:description "pid.pathway OBO" ; schema1:url . kgr:obo-db-ingest.pid.pathway.owl a schema1:Product ; rdfs:label "pid.pathway OWL" ; dcterms:description "pid.pathway OWL" ; schema1:url . kgr:obo-db-ingest.pombase.json a schema1:Product ; rdfs:label "pombase OBO Graph JSON" ; dcterms:description "pombase OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pombase.obo a schema1:Product ; rdfs:label "pombase OBO" ; dcterms:description "pombase OBO" ; schema1:url . kgr:obo-db-ingest.pombase.owl a schema1:Product ; rdfs:label "pombase OWL" ; dcterms:description "pombase OWL" ; schema1:url . kgr:obo-db-ingest.reactome.json a schema1:Product ; rdfs:label "reactome OBO Graph JSON" ; dcterms:description "reactome OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.reactome.obo a schema1:Product ; rdfs:label "reactome OBO" ; dcterms:description "reactome OBO" ; schema1:url . kgr:obo-db-ingest.reactome.owl a schema1:Product ; rdfs:label "reactome OWL" ; dcterms:description "reactome OWL" ; schema1:url . kgr:obo-db-ingest.rgd.json a schema1:Product ; rdfs:label "rgd OBO Graph JSON" ; dcterms:description "rgd OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.rgd.obo a schema1:Product ; rdfs:label "rgd OBO" ; dcterms:description "rgd OBO" ; schema1:url . kgr:obo-db-ingest.rgd.owl a schema1:Product ; rdfs:label "rgd OWL" ; dcterms:description "rgd OWL" ; schema1:url . kgr:obo-db-ingest.rgd.sssom.tsv a schema1:MappingProduct ; rdfs:label "rgd SSSOM" ; dcterms:description "rgd SSSOM" ; schema1:url . kgr:obo-db-ingest.ror.json a schema1:Product ; rdfs:label "ror OBO Graph JSON" ; dcterms:description "ror OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.ror.obo a schema1:Product ; rdfs:label "ror OBO" ; dcterms:description "ror OBO" ; schema1:url . kgr:obo-db-ingest.ror.owl a schema1:Product ; rdfs:label "ror OWL" ; dcterms:description "ror OWL" ; schema1:url . kgr:obo-db-ingest.ror.sssom.tsv a schema1:MappingProduct ; rdfs:label "ror SSSOM" ; dcterms:description "ror SSSOM" ; schema1:url . kgr:obo-db-ingest.sgd.json a schema1:Product ; rdfs:label "sgd OBO Graph JSON" ; dcterms:description "sgd OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.sgd.obo a schema1:Product ; rdfs:label "sgd OBO" ; dcterms:description "sgd OBO" ; schema1:url . kgr:obo-db-ingest.sgd.owl a schema1:Product ; rdfs:label "sgd OWL" ; dcterms:description "sgd OWL" ; schema1:url . kgr:obo-db-ingest.signor.json a schema1:Product ; rdfs:label "signor OBO Graph JSON" ; dcterms:description "signor OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.signor.obo a schema1:Product ; rdfs:label "signor OBO" ; dcterms:description "signor OBO" ; schema1:url . kgr:obo-db-ingest.signor.owl a schema1:Product ; rdfs:label "signor OWL" ; dcterms:description "signor OWL" ; schema1:url . kgr:obo-db-ingest.slm.json a schema1:Product ; rdfs:label "slm OBO Graph JSON" ; dcterms:description "slm OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.slm.obo a schema1:Product ; rdfs:label "slm OBO" ; dcterms:description "slm OBO" ; schema1:url . kgr:obo-db-ingest.slm.owl a schema1:Product ; rdfs:label "slm OWL" ; dcterms:description "slm OWL" ; schema1:url . kgr:obo-db-ingest.slm.sssom.tsv a schema1:MappingProduct ; rdfs:label "slm SSSOM" ; dcterms:description "slm SSSOM" ; schema1:url . kgr:obo-db-ingest.sty.json a schema1:Product ; rdfs:label "sty OBO Graph JSON" ; dcterms:description "sty OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.sty.obo a schema1:Product ; rdfs:label "sty OBO" ; dcterms:description "sty OBO" ; schema1:url . kgr:obo-db-ingest.sty.owl a schema1:Product ; rdfs:label "sty OWL" ; dcterms:description "sty OWL" ; schema1:url . kgr:obo-db-ingest.uniprot.json a schema1:Product ; rdfs:label "uniprot OBO Graph JSON" ; dcterms:description "uniprot OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.uniprot.obo a schema1:Product ; rdfs:label "uniprot OBO" ; dcterms:description "uniprot OBO" ; schema1:url . kgr:obo-db-ingest.uniprot.owl a schema1:Product ; rdfs:label "uniprot OWL" ; dcterms:description "uniprot OWL" ; schema1:url . kgr:obo-db-ingest.uniprot.ptm.json a schema1:Product ; rdfs:label "uniprot.ptm OBO Graph JSON" ; dcterms:description "uniprot.ptm OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.uniprot.ptm.obo a schema1:Product ; rdfs:label "uniprot.ptm OBO" ; dcterms:description "uniprot.ptm OBO" ; schema1:url . kgr:obo-db-ingest.uniprot.ptm.owl a schema1:Product ; rdfs:label "uniprot.ptm OWL" ; dcterms:description "uniprot.ptm OWL" ; schema1:url . kgr:obo-db-ingest.uniprot.ptm.sssom.tsv a schema1:MappingProduct ; rdfs:label "uniprot.ptm SSSOM" ; dcterms:description "uniprot.ptm SSSOM" ; schema1:url . kgr:obo-db-ingest.uniprot.sssom.tsv a schema1:MappingProduct ; rdfs:label "uniprot SSSOM" ; dcterms:description "uniprot SSSOM" ; schema1:url . kgr:obo-db-ingest.wikipathways.json a schema1:Product ; rdfs:label "wikipathways OBO Graph JSON" ; dcterms:description "wikipathways OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.wikipathways.obo a schema1:Product ; rdfs:label "wikipathways OBO" ; dcterms:description "wikipathways OBO" ; schema1:url . kgr:obo-db-ingest.wikipathways.owl a schema1:Product ; rdfs:label "wikipathways OWL" ; dcterms:description "wikipathways OWL" ; schema1:url . kgr:occo.owl a schema1:OntologyProduct ; rdfs:label "occo.owl" ; dcterms:description "Occupation Ontology in OWL format" ; schema1:url . kgr:ogg.owl a schema1:OntologyProduct ; rdfs:label "ogg.owl" ; dcterms:description "The Ontology of Genes and Genomes in OWL format" ; schema1:url . kgr:ogi.owl a schema1:OntologyProduct ; rdfs:label "ogi.owl" ; dcterms:description "Ontology for genetic interval in OWL format" ; schema1:url . kgr:ogms.owl a schema1:OntologyProduct ; rdfs:label "ogms.owl" ; dcterms:description "Ontology for General Medical Science in OWL format" ; schema1:url . kgr:ogsf.owl a schema1:OntologyProduct ; rdfs:label "ogsf.owl" ; dcterms:description "Ontology of Genetic Susceptibility Factor in OWL format" ; schema1:url . kgr:ohd.dev.ohd.owl a schema1:OntologyProduct ; rdfs:label "OHD dev" ; dcterms:description "OHD dev" ; schema1:url . kgr:ohd.owl a schema1:OntologyProduct ; rdfs:label "ohd.owl" ; dcterms:description "Oral Health and Disease Ontology in OWL format" ; schema1:url . kgr:ohmi.owl a schema1:OntologyProduct ; rdfs:label "ohmi.owl" ; dcterms:description "Ontology of Host-Microbiome Interactions in OWL format" ; schema1:url . kgr:ohpi.owl a schema1:OntologyProduct ; rdfs:label "ohpi.owl" ; dcterms:description "Ontology of Host Pathogen Interactions in OWL format" ; schema1:url . kgr:oio.obo a schema1:OntologyProduct ; rdfs:label "OIO OBO" ; dcterms:description "OBO Interoperability Ontology in OBO format" . kgr:oio.owl a schema1:OntologyProduct ; rdfs:label "OIO OWL" ; dcterms:description "OBO Interoperability Ontology in OWL format" . kgr:olatdv.obo a schema1:OntologyProduct ; rdfs:label "olatdv.obo" ; dcterms:description "Medaka Developmental Stages in OBO format" ; schema1:url . kgr:olatdv.owl a schema1:OntologyProduct ; rdfs:label "olatdv.owl" ; dcterms:description "Medaka Developmental Stages in OWL format" ; schema1:url . kgr:ols.api a schema1:ProgrammingInterface ; rdfs:label "OLS REST API" ; dcterms:description "RESTful API for programmatic access to ontology data including terms, properties, and relationships" ; schema1:url . kgr:ols.json a schema1:Product ; rdfs:label "OLS Ontologies JSON" ; dcterms:description "Internal JSON representation of all loaded ontologies (approximately 50 GB uncompressed)" ; schema1:url . kgr:ols.mappings a schema1:MappingProduct ; rdfs:label "OLS SSSOM Mappings" ; dcterms:description "Ontology mappings extracted from all ontologies in SSSOM TSV format" ; schema1:url . kgr:ols.neo4j a schema1:GraphProduct ; rdfs:label "OLS Neo4j Database" ; dcterms:description "Neo4j database with linked ontology data including cross-references between ontologies and external databases (approximately 150 GB)" ; schema1:url . kgr:ols.portal a schema1:GraphicalInterface ; rdfs:label "OLS Web Portal" ; dcterms:description "Web interface for browsing and searching biomedical ontologies with exact match and obsolete term filtering" ; schema1:url . kgr:ols.solr a schema1:Product ; rdfs:label "OLS Solr Database" ; dcterms:description "Solr search index database for ontology searching (requires Solr 9.0.0)" ; schema1:url . kgr:oma.api.rest a schema1:ProgrammingInterface ; rdfs:label "OMA REST API" ; dcterms:description "RESTful API for accessing OMA data" ; schema1:url . kgr:oma.api.sparql a schema1:ProgrammingInterface ; rdfs:label "OMA SPARQL" ; dcterms:description "SPARQL endpoint for accessing OMA data" ; schema1:url . kgr:oma.cdna.eukaryotes.fasta a schema1:Product ; rdfs:label "OMA cDNA Sequences (Eukaryotes)" ; dcterms:description "cDNA sequences for Eukaryotic genomes in FASTA format" ; schema1:url . kgr:oma.cdna.prokaryotes.fasta a schema1:Product ; rdfs:label "OMA cDNA Sequences (Prokaryotes)" ; dcterms:description "cDNA sequences for Prokaryotic genomes in FASTA format" ; schema1:url . kgr:oma.groups.orthoxml a schema1:Product ; rdfs:label "OMA Groups (OrthoXML)" ; dcterms:description "OMA orthology groups in OrthoXML format" ; schema1:url . kgr:oma.groups.txt a schema1:Product ; rdfs:label "OMA Groups (Text)" ; dcterms:description "OMA orthology groups in plain text format" ; schema1:url . kgr:oma.hdf5 a schema1:Product ; rdfs:label "OMA Browser Database (HDF5)" ; dcterms:description "OMA Browser database in HDF5 format" ; schema1:url . kgr:oma.hogs.orthoxml a schema1:Product ; rdfs:label "OMA HOGs (OrthoXML)" ; dcterms:description "Hierarchical Orthologous Groups (HOGs) in OrthoXML format" ; schema1:url . kgr:oma.pairs.txt a schema1:Product ; rdfs:label "OMA Pairwise Orthologs" ; dcterms:description "Pairwise orthologs in tab-separated text format" ; schema1:url . kgr:oma.proteins.fasta a schema1:Product ; rdfs:label "OMA Protein Sequences" ; dcterms:description "Protein sequences from all genomes in FASTA format" ; schema1:url . kgr:oma.rdf a schema1:Product ; rdfs:label "OMA RDF Data" ; dcterms:description "OMA data in RDF format (Turtle syntax)" ; schema1:url . kgr:oma.site a schema1:GraphicalInterface ; rdfs:label "OMA Browser" ; dcterms:description "Web interface for exploring OMA data" ; schema1:url . kgr:omiabis.owl a schema1:OntologyProduct ; rdfs:label "omiabis.owl" ; dcterms:description "Ontologized MIABIS in OWL format" ; schema1:url . kgr:omicsdi.api a schema1:ProgrammingInterface ; rdfs:label "OmicsDI API" ; dcterms:description "Swagger-documented web service for programmatic querying of OmicsDI dataset metadata." ; schema1:url . kgr:omicsdi.portal a schema1:GraphicalInterface ; rdfs:label "OmicsDI Portal" ; dcterms:description "Web portal for searching and browsing integrated omics dataset metadata across repositories." ; schema1:url . kgr:omim.api a schema1:ProgrammingInterface ; rdfs:label "OMIM API" ; dcterms:description "REST-based API for programmatic access to OMIM data (registration and API key required)" ; schema1:url . kgr:omim.web a schema1:GraphicalInterface ; rdfs:label "OMIM Website" ; dcterms:description "Web interface for browsing and searching OMIM entries" ; schema1:url . kgr:omit.owl a schema1:OntologyProduct ; rdfs:label "omit.owl" ; dcterms:description "Ontology for MIRNA Target in OWL format" ; schema1:url . kgr:omnipath.cytoscape_plugin a schema1:ProcessProduct ; rdfs:label "OmniPath Cytoscape Plugin" ; dcterms:description "Cytoscape plugin for importing and visualizing OmniPath network data within the Cytoscape network analysis platform" ; schema1:url . kgr:omnipath.explorer a schema1:GraphicalInterface ; rdfs:label "OmniPath Explorer" ; dcterms:description "Interactive database explorer for browsing OmniPath data integrated from 160+ resources" ; schema1:url . kgr:omnipath.pypath a schema1:ProcessProduct ; rdfs:label "PyPath Database Builder" ; dcterms:description "Python package (pypath) for building custom OmniPath databases and accessing the OmniPath infrastructure" ; schema1:url . kgr:omnipath.python_client a schema1:ProgrammingInterface ; rdfs:label "OmniPath Python Client" ; dcterms:description "Python client library providing programmatic access to OmniPath databases for Python-based analysis workflows" ; schema1:url . kgr:omnipath.r_package a schema1:ProgrammingInterface ; rdfs:label "OmnipathR Package" ; dcterms:description "R/Bioconductor package (OmnipathR) for accessing and analyzing OmniPath data within the R statistical computing environment" ; schema1:url . kgr:omnipath.webservice a schema1:ProgrammingInterface ; rdfs:label "OmniPath Web Service" ; dcterms:description "Web service API providing programmatic access to OmniPath molecular interaction networks, annotations, and intercellular communication data" ; schema1:url . kgr:omo.owl a schema1:OntologyProduct ; rdfs:label "omo.owl" ; dcterms:description "OBO Metadata Ontology in OWL format" ; schema1:url . kgr:omp.obo a schema1:OntologyProduct ; rdfs:label "omp.obo" ; dcterms:description "Ontology of Microbial Phenotypes in OBO format" ; schema1:url . kgr:omp.owl a schema1:OntologyProduct ; rdfs:label "omp.owl" ; dcterms:description "Ontology of Microbial Phenotypes in OWL format" ; schema1:url . kgr:omrse.owl a schema1:OntologyProduct ; rdfs:label "omrse.owl" ; dcterms:description "Ontology for Modeling and Representation of Social Entities in OWL format" ; schema1:url . kgr:oncokb.annotator a schema1:ProcessProduct ; rdfs:label "OncoKB Annotator" ; dcterms:description "Python-based annotation tool for annotating MAF files, copy number alterations, fusions, and structural variants with OncoKB therapeutic and biological annotations" ; schema1:url . kgr:oncokb.api a schema1:ProgrammingInterface ; rdfs:label "OncoKB Web API" ; dcterms:description "RESTful web API providing programmatic access to OncoKB data including gene annotations, variant classifications, therapeutic implications, and evidence levels" ; schema1:url . kgr:oncokb.demo a schema1:GraphicalInterface ; rdfs:label "OncoKB Demo" ; dcterms:description "Demo version of OncoKB containing full data for BRAF, TP53, and ROS1 genes for evaluation purposes before licensing" ; schema1:url . kgr:oncokb.web_interface a schema1:GraphicalInterface ; rdfs:label "OncoKB Web Interface" ; dcterms:description "Interactive web interface for exploring OncoKB precision oncology knowledge base, including gene and variant information, therapeutic implications, and evidence levels" ; schema1:url . kgr:one.owl a schema1:OntologyProduct ; rdfs:label "one.owl" ; dcterms:description "Ontology for Nutritional Epidemiology in OWL format" ; schema1:url . kgr:ons.owl a schema1:OntologyProduct ; rdfs:label "ONS latest release" ; dcterms:description "ONS latest release" ; schema1:url . kgr:ontoavida.obo a schema1:OntologyProduct ; rdfs:label "OBO" ; dcterms:description "Equivalent to ontoavida.owl, in obo format" ; schema1:url . kgr:ontoavida.owl a schema1:OntologyProduct ; rdfs:label "OWL" ; dcterms:description "The main ontology in OWL" ; schema1:url . kgr:ontology-kp.docs a schema1:DocumentationProduct ; rdfs:label "Ontology KP Documentation" ; dcterms:description "Translator wiki documentation for the SRI Ontology Service and Ontology KP usage." ; schema1:url . kgr:ontology-kp.ubergraph a schema1:ProcessProduct ; rdfs:label "Ontology KP UberGraph Source" ; dcterms:description "UberGraph source repository used to support ontology reasoning and integrated ontology queries." ; schema1:url . kgr:ontoneo.owl a schema1:OntologyProduct ; rdfs:label "ONTONEO" ; dcterms:description "The full version of ONTONEO in OWL format" ; schema1:url . kgr:ontotext a "Organization" ; rdfs:label "Ontotext Lab, Sirma Group" . kgr:oostt.owl a schema1:OntologyProduct ; rdfs:label "oostt.owl" ; dcterms:description "Ontology of Organizational Structures of Trauma centers and Trauma systems in OWL format" ; schema1:url . kgr:open-tree-of-life-collaboration a "Organization" ; rdfs:label "Open Tree of Life Collaboration" . kgr:openbiodiv.api a schema1:ProgrammingInterface ; rdfs:label "OpenBiodiv REST API" ; dcterms:description "RESTful API for programmatic access to OpenBiodiv biodiversity data with Swagger API documentation for easy integration" ; schema1:url . kgr:openbiodiv.ontology.guide a schema1:DocumentationProduct ; rdfs:label "OpenBioDiv-O Guide" ; dcterms:description "Guide to OpenBioDiv-O, the OpenBiodiv Ontology" ; schema1:url . kgr:openbiodiv.portal a schema1:GraphicalInterface ; rdfs:label "OpenBiodiv Web Portal" ; dcterms:description "Interactive web portal for searching, exploring, and discovering biodiversity knowledge graph data including taxonomic treatments, species descriptions, and literature-extracted information" ; schema1:url . kgr:openbiodiv.sparql a schema1:ProgrammingInterface ; rdfs:label "OpenBiodiv SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for complex semantic queries across the biodiversity knowledge graph, enabling advanced queries combining taxonomic, literature, specimen, and ecological data" ; schema1:url . kgr:openpredict.api a schema1:ProgrammingInterface ; rdfs:label "OpenPredict API" ; dcterms:description "TRAPI-compliant API for drug repurposing predictions" ; schema1:url . kgr:openpredict.predictions a schema1:Product ; rdfs:label "OpenPredict Prediction Data" ; dcterms:description "Pre-computed drug-disease predictions" ; schema1:url . kgr:openpredict.ui a schema1:GraphicalInterface ; rdfs:label "OpenPredict Web Interface" ; dcterms:description "Web interface for exploring drug repurposing predictions" ; schema1:url . kgr:opentargets.api.graphql a schema1:ProgrammingInterface ; rdfs:label "Open Targets Platform GraphQL API" ; dcterms:description "GraphQL API for accessing Open Targets Platform data programmatically." ; schema1:url . kgr:opentargets.api.rest a schema1:ProgrammingInterface ; rdfs:label "Open Targets Platform REST API" ; dcterms:description "REST API for accessing Open Targets Platform data programmatically." ; schema1:url . kgr:opentargets.platform a schema1:GraphicalInterface ; rdfs:label "Open Targets Platform" ; dcterms:description "The Open Targets Platform integrates and visualizes public data on target-disease associations to assist in drug target identification and prioritization." ; schema1:url . kgr:opl.owl a schema1:OntologyProduct ; rdfs:label "opl.owl" ; dcterms:description "Ontology for Parasite LifeCycle in OWL format" ; schema1:url . kgr:opmi.owl a schema1:OntologyProduct ; rdfs:label "opmi.owl" ; dcterms:description "Ontology of Precision Medicine and Investigation in OWL format" ; schema1:url . kgr:orcid.api a schema1:ProgrammingInterface ; rdfs:label "ORCID Public API" ; dcterms:description "Public API documentation and access information for ORCID record retrieval." ; schema1:url . kgr:orcid.portal a schema1:GraphicalInterface ; rdfs:label "ORCID Registry Portal" ; dcterms:description "Web interface for searching ORCID records and viewing researcher profiles." ; schema1:url . kgr:ordo.owl a schema1:DataModelProduct ; rdfs:label "ORDO OWL" ; dcterms:description "ORDO in OWL format in English (v4.7)" ; schema1:url . kgr:ordo.sparql a schema1:ProgrammingInterface ; rdfs:label "ORDO SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying the ORDO ontology" ; schema1:url . kgr:ornaseq.owl a schema1:OntologyProduct ; rdfs:label "ornaseq.owl" ; dcterms:description "Ontology of RNA Sequencing in OWL format" ; schema1:url . kgr:orphacode.api a schema1:ProgrammingInterface ; rdfs:label "ORPHAcodes API" ; dcterms:description "API for accessing the Orphanet nomenclature pack data, allowing flexible implementation into various healthcare information systems." ; schema1:url . kgr:orphacode.nomenclature a schema1:DataModelProduct ; rdfs:label "Orphanet Nomenclature Pack" ; dcterms:description "The Orphanet nomenclature pack provides ORPHAcodes (unique identifiers) for rare diseases, along with mappings to other terminologies, and is released annually in July." ; schema1:url . kgr:orphanet.biobanks a schema1:Product ; rdfs:label "Biobanks Dataset" ; dcterms:description "XML dataset containing information on biobanks dedicated to rare diseases." ; schema1:url . kgr:orphanet.biobanksnetworks a schema1:Product ; rdfs:label "Biobanks Networks Dataset" ; dcterms:description "XML dataset containing information on biobank networks for rare diseases." ; schema1:url . kgr:orphanet.clinicaltrials a schema1:Product ; rdfs:label "National Clinical Trials Dataset" ; dcterms:description "XML dataset containing information on national clinical trials for rare diseases." ; schema1:url . kgr:orphanet.clinicaltrialsnetworks a schema1:Product ; rdfs:label "Multinational Clinical Trials Networks Dataset" ; dcterms:description "XML dataset containing information on multinational clinical trial networks for rare diseases." ; schema1:url . kgr:orphanet.diagnostictests a schema1:Product ; rdfs:label "Diagnostic Tests and Laboratories Dataset" ; dcterms:description "XML dataset containing information on diagnostic tests and clinical laboratories for rare diseases." ; schema1:url . kgr:orphanet.expertcenters a schema1:Product ; rdfs:label "Expert Centers Dataset" ; dcterms:description "XML dataset containing information on expert centers dedicated to the medical management and/or genetic counselling for rare diseases." ; schema1:url . kgr:orphanet.expertcentersnetworks a schema1:Product ; rdfs:label "Expert Centers Networks Dataset" ; dcterms:description "XML dataset containing information on expert center networks for rare diseases." ; schema1:url . kgr:orphanet.orphadataapi a schema1:ProgrammingInterface ; rdfs:label "Orphadata API" ; dcterms:description "APIs providing access to Orphanet scientific knowledge, ORPHAcodes, and expert resources data." ; schema1:url . kgr:orphanet.orphandrugs a schema1:Product ; rdfs:label "Orphan Drugs Dataset" ; dcterms:description "XML dataset containing information on orphan drugs for rare diseases, including substances with orphan designation and/or marketing authorization." ; schema1:url . kgr:orphanet.patientorganizations a schema1:Product ; rdfs:label "Patient Organizations Dataset" ; dcterms:description "XML dataset containing information on patient organizations dedicated to rare diseases." ; schema1:url . kgr:orphanet.patientorganizationsnetworks a schema1:Product ; rdfs:label "Patient Organizations Networks Dataset" ; dcterms:description "XML dataset containing information on patient organization networks for rare diseases." ; schema1:url . kgr:orphanet.patientregistries a schema1:Product ; rdfs:label "Patient Registries Dataset" ; dcterms:description "XML dataset containing information on patient registries for rare diseases." ; schema1:url . kgr:orphanet.patientregistriesnetworks a schema1:Product ; rdfs:label "Patient Registries Networks Dataset" ; dcterms:description "XML dataset containing information on patient registry networks for rare diseases." ; schema1:url . kgr:orphanet.researchprojects a schema1:Product ; rdfs:label "National Research Projects Dataset" ; dcterms:description "XML dataset containing information on national research projects focused on rare diseases." ; schema1:url . kgr:orphanet.researchprojectsnetworks a schema1:Product ; rdfs:label "Multinational Research Projects Networks Dataset" ; dcterms:description "XML dataset containing information on multinational research project networks for rare diseases." ; schema1:url . kgr:orthodb.aa_fasta a schema1:Product ; rdfs:label "OrthoDB Protein Sequences" ; dcterms:description "FASTA-formatted amino acid sequences for all genes" ; schema1:url . kgr:orthodb.api.rest a schema1:ProgrammingInterface ; rdfs:label "OrthoDB API" ; dcterms:description "RESTful API for programmatic access to OrthoDB data" ; schema1:url . kgr:orthodb.api.sparql a schema1:ProgrammingInterface ; rdfs:label "OrthoDB SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying OrthoDB data" ; schema1:url . kgr:orthodb.cds_fasta a schema1:Product ; rdfs:label "OrthoDB CDS Sequences" ; dcterms:description "FASTA-formatted coding sequences for all genes" ; schema1:url . kgr:orthodb.gene_xrefs a schema1:MappingProduct ; rdfs:label "OrthoDB Gene Cross-references" ; dcterms:description "Tab-separated file with gene cross-references to other databases" ; schema1:url . kgr:orthodb.genes a schema1:Product ; rdfs:label "OrthoDB Genes Data" ; dcterms:description "Tab-separated file with gene information and annotations" ; schema1:url . kgr:orthodb.og2genes a schema1:MappingProduct ; rdfs:label "OrthoDB OG to Genes Mapping" ; dcterms:description "Tab-separated file mapping orthologous groups to genes" ; schema1:url . kgr:orthodb.og_xrefs a schema1:Product ; rdfs:label "OrthoDB OG Functional Annotations" ; dcterms:description "Tab-separated file with orthologous group functional annotations including GO, COG, and InterPro" ; schema1:url . kgr:orthodb.ogs a schema1:Product ; rdfs:label "OrthoDB Orthologous Groups" ; dcterms:description "Tab-separated file with information about orthologous groups" ; schema1:url . kgr:orthodb.site a schema1:GraphicalInterface ; rdfs:label "OrthoDB Web Interface" ; dcterms:description "Web interface for exploring OrthoDB data" ; schema1:url . kgr:orthodb.species a schema1:Product ; rdfs:label "OrthoDB Species Data" ; dcterms:description "Tab-separated file with species information based on NCBI taxonomy" ; schema1:url . kgr:otol.api a schema1:ProgrammingInterface ; rdfs:label "Open Tree of Life APIs" ; dcterms:description "RESTful APIs providing programmatic access to synthetic tree, taxonomy, and taxonomic name resolution services with support for MRCA queries and subtree extraction" ; schema1:url . kgr:otol.bulk-download a schema1:Product ; rdfs:label "Open Tree of Life Bulk Downloads" ; dcterms:description "Preprocessed source trees and taxonomy files available for bulk download in Newick, Nexus, and JSON formats" ; schema1:url . kgr:otol.documentation a schema1:DocumentationProduct ; rdfs:label "Open Tree of Life Developer Documentation" ; dcterms:description "API reference, developer guides, and integration documentation for accessing Open Tree of Life data programmatically" ; schema1:url . kgr:otol.phylesystem a schema1:Product ; rdfs:label "Phylesystem Data Repository" ; dcterms:description "Complete phylesystem repository containing 4,500+ curated phylogenetic studies in NexSON JSON format with full version control history" ; schema1:url . kgr:otol.tnrs a schema1:ProgrammingInterface ; rdfs:label "Taxonomic Name Resolution Service (TNRS)" ; dcterms:description "Taxonomic Name Resolution Service (TNRS) providing exact and fuzzy matching of taxonomic names to Open Tree Taxonomy with context-based disambiguation" ; schema1:url . kgr:otol.tree-browser a schema1:GraphicalInterface ; rdfs:label "Open Tree of Life Browser" ; dcterms:description "Interactive zoomable phylogenetic tree browser enabling exploration of taxonomic relationships and phylogenetic structure across 2.4 million tips" ; schema1:url . kgr:ovae.owl a schema1:OntologyProduct ; rdfs:label "ovae.owl" ; dcterms:description "Ontology of Vaccine Adverse Events in OWL format" ; schema1:url . kgr:owlsim.cli a schema1:ProcessProduct ; rdfs:label "OWLSim Command-Line Tools" ; dcterms:description "Command-line tools for batch processing of semantic similarity calculations" ; schema1:url . kgr:owlsim.library a schema1:ProcessProduct ; rdfs:label "OWLTools-Sim Library" ; dcterms:description "Java library implementing semantic similarity algorithms for ontology-based profile matching" ; schema1:url . kgr:oxo.api a schema1:ProgrammingInterface ; rdfs:label "OxO REST API" ; dcterms:description "RESTful API for programmatic access to cross-ontology mappings and term equivalence searches" ; schema1:url . kgr:oxo.portal a schema1:GraphicalInterface ; rdfs:label "OxO Web Interface" ; dcterms:description "Web-based interface for searching and browsing ontology cross-references and mappings" ; schema1:url . kgr:pankbase.api a schema1:ProgrammingInterface ; rdfs:label "PanKBase Data Library API" ; dcterms:description "Programming interface for accessing contents of the PanKbase Data Portal" ; schema1:url . kgr:pankbase.graph a schema1:GraphProduct ; rdfs:label "PanKGraph" ; dcterms:description "Knowledge graph representation of human pancreas and diabetes data" . kgr:pankbase.graph.api a schema1:ProgrammingInterface ; rdfs:label "PanKGraph API" ; dcterms:description "Programming interface for exploring the PanKGraph" ; schema1:url . kgr:pankbase.graph.site a schema1:GraphicalInterface ; rdfs:label "PanKGraph Site" ; dcterms:description "Graphical interface for exploring the PanKGraph" ; schema1:url . kgr:pathophenodb.data a schema1:GraphProduct ; rdfs:label "PathoPhenoDB RDF data, version 3" ; dcterms:description "PathoPhenoDB data containing pathogen-disease and pathogen-phenotype associations" ; schema1:url . kgr:pathophenodb.web a schema1:GraphicalInterface ; rdfs:label "PathoPhenoDB Web Interface" ; dcterms:description "Web interface for querying and browsing PathoPhenoDB data" ; schema1:url . kgr:pathway-commons.api a schema1:ProgrammingInterface ; rdfs:label "Pathway Commons REST API" ; dcterms:description "RESTful web service API for programmatic access to Pathway Commons data with multiple query capabilities including search, pathway retrieval, and network analysis" ; schema1:url . kgr:pathway-commons.biopax a schema1:Product ; rdfs:label "Integrated BioPAX Model" ; dcterms:description "Integrated BioPAX Level 3 unified model containing normalized pathway data, molecular interactions, and cross-database entity mappings from 22 sources" . kgr:pathway-commons.documentation a schema1:DocumentationProduct ; rdfs:label "Pathway Commons Documentation" ; dcterms:description "Comprehensive API documentation, data format specifications, and tutorials for using Pathway Commons data and services" ; schema1:url . kgr:pathway-commons.downloads a schema1:Product ; rdfs:label "Pathway Commons Data Downloads" ; dcterms:description "Downloadable integrated pathway datasets in multiple standardized formats including BioPAX, SIF, GMT, and JSON-LD" ; schema1:url . kgr:pathway-commons.gmt a schema1:Product ; rdfs:label "GMT Gene Set Format" ; dcterms:description "Gene Matrix Transposed (GMT) format gene sets for pathway enrichment analysis with tools like GSEA (Gene Set Enrichment Analysis)" . kgr:pathway-commons.jsonld a schema1:Product ; rdfs:label "JSON-LD Linked Data Format" ; dcterms:description "JSON-LD format for linked data web applications with semantic context and programmatic access to pathway information" . kgr:pathway-commons.sif a schema1:Product ; rdfs:label "SIF Network Format" ; dcterms:description "Simple Interaction Format (SIF) network files representing binary pairwise molecular relationships for network analysis and visualization" . kgr:pathway-commons.web a schema1:GraphicalInterface ; rdfs:label "Pathway Commons Web Interface" ; dcterms:description "Interactive web-based interface for browsing, searching, and visualizing biological pathways and molecular interactions" ; schema1:url . kgr:pathwhiz.editor a schema1:GraphicalInterface ; rdfs:label "PathWhiz Pathway Editor" ; dcterms:description "Web interface for creating, editing, and visualizing biological pathway diagrams with automated metabolite structure generation and interactive features" ; schema1:url . kgr:pathwhiz.pathways a schema1:GraphicalInterface ; rdfs:label "PathWhiz Pathway Library" ; dcterms:description "Public library of pathway diagrams that can be browsed, viewed, and used as templates for creating new pathways" ; schema1:url . kgr:pato.json a schema1:OntologyProduct ; rdfs:label "pato.json" ; dcterms:description "Phenotype And Trait Ontology in JSON format" ; schema1:url . kgr:pato.obo a schema1:OntologyProduct ; rdfs:label "pato.obo" ; dcterms:description "Phenotype And Trait Ontology in OBO format" ; schema1:url . kgr:pato.owl a schema1:OntologyProduct ; rdfs:label "pato.owl" ; dcterms:description "Phenotype And Trait Ontology in OWL format" ; schema1:url . kgr:pato.pato-base.owl a schema1:OntologyProduct ; rdfs:label "pato.pato-base.owl" ; dcterms:description "Includes axioms linking to other ontologies, but no imports of those ontologies" ; schema1:url . kgr:patric.api a schema1:ProgrammingInterface ; rdfs:label "BV-BRC API" ; dcterms:description "API for programmatic access to bacterial data" ; schema1:url . kgr:patric.genomes a schema1:Product ; rdfs:label "PATRIC Genome Data" ; dcterms:description "Bacterial genome data and annotations" ; schema1:url . kgr:patric.web a schema1:GraphicalInterface ; rdfs:label "PATRIC/BV-BRC Web Portal" ; dcterms:description "Web portal for bacterial genomics (now at BV-BRC)" ; schema1:url . kgr:pbpko.json a schema1:OntologyProduct ; rdfs:label "pbpko.json" ; dcterms:description "Physiologically-Based Pharmacokinetic Ontology in JSON format" ; schema1:url . kgr:pbpko.obo a schema1:OntologyProduct ; rdfs:label "pbpko.obo" ; dcterms:description "Physiologically-Based Pharmacokinetic Ontology in OBO format" ; schema1:url . kgr:pbpko.owl a schema1:OntologyProduct ; rdfs:label "pbpko.owl" ; dcterms:description "Physiologically-Based Pharmacokinetic Ontology in OWL format" ; schema1:url . kgr:pcl-base.json a schema1:OntologyProduct ; rdfs:label "pcl-base.json" ; dcterms:description "Provisional Cell Ontology in JSON format" ; schema1:url . kgr:pcl-base.obo a schema1:OntologyProduct ; rdfs:label "pcl-base.obo" ; dcterms:description "Provisional Cell Ontology in OBO format" ; schema1:url . kgr:pcl-base.owl a schema1:OntologyProduct ; rdfs:label "pcl-base.owl" ; dcterms:description "Provisional Cell Ontology in OWL format" ; schema1:url . kgr:pcl-full.json a schema1:OntologyProduct ; rdfs:label "pcl-full.json" ; dcterms:description "Provisional Cell Ontology in JSON format" ; schema1:url . kgr:pcl-full.obo a schema1:OntologyProduct ; rdfs:label "pcl-full.obo" ; dcterms:description "Provisional Cell Ontology in OBO format" ; schema1:url . kgr:pcl-full.owl a schema1:OntologyProduct ; rdfs:label "pcl-full.owl" ; dcterms:description "Provisional Cell Ontology in OWL format" ; schema1:url . kgr:pcl-simple.json a schema1:OntologyProduct ; rdfs:label "pcl-simple.json" ; dcterms:description "Provisional Cell Ontology in JSON format" ; schema1:url . kgr:pcl-simple.obo a schema1:OntologyProduct ; rdfs:label "pcl-simple.obo" ; dcterms:description "Provisional Cell Ontology in OBO format" ; schema1:url . kgr:pcl-simple.owl a schema1:OntologyProduct ; rdfs:label "pcl-simple.owl" ; dcterms:description "Provisional Cell Ontology in OWL format" ; schema1:url . kgr:pcl.json a schema1:OntologyProduct ; rdfs:label "pcl.json" ; dcterms:description "Provisional Cell Ontology in JSON format" ; schema1:url . kgr:pcl.obo a schema1:OntologyProduct ; rdfs:label "pcl.obo" ; dcterms:description "Provisional Cell Ontology in OBO format" ; schema1:url . kgr:pcl.owl a schema1:OntologyProduct ; rdfs:label "pcl.owl" ; dcterms:description "Provisional Cell Ontology in OWL format" ; schema1:url . kgr:pco.owl a schema1:OntologyProduct ; rdfs:label "pco.owl" ; dcterms:description "Population and Community Ontology in OWL format" ; schema1:url . kgr:pdb.archive a schema1:Product ; rdfs:label "wwPDB Archive Downloads" ; dcterms:description "Bulk download site for archive files from the worldwide Protein Data Bank." ; schema1:url . kgr:pdb.data-api a schema1:ProgrammingInterface ; rdfs:label "RCSB Data API" ; dcterms:description "Programmatic API for structured retrieval of PDB entry, entity, and assembly data." ; schema1:url . kgr:pdb.portal a schema1:GraphicalInterface ; rdfs:label "RCSB PDB Portal" ; dcterms:description "Web interface for searching and exploring biomolecular 3D structure entries." ; schema1:url . kgr:pdbe.download-service a schema1:Product ; rdfs:label "PDBe Download Service" ; dcterms:description "Downloadable coordinate files, experimental data files, validation reports, FASTA sequences, and small molecule data for PDB entries" ; schema1:url . kgr:pdbe.kb-api a schema1:ProgrammingInterface ; rdfs:label "PDBe-KB Graph API" ; dcterms:description "RESTful API powered by the PDBe-KB graph database, providing programmatic access to structural data and functional annotations" ; schema1:url . kgr:pdbe.kb-ftp a schema1:Product ; rdfs:label "PDBe-KB FTP Archive" ; dcterms:description "FTP archive providing bulk download access to PDBe-KB data files and annotations" ; schema1:url . kgr:pdbe.kb-graph-database.neo4j3 a schema1:GraphProduct ; rdfs:label "PDBe-KB Graph Database for Neo4J 3.5" ; dcterms:description "Neo4j graph database containing integrated PDBe-KB data with PDB entries, chains, entities, residues, and functional annotations. This version (graph.db.tgz) is for Neo4J 3.5." ; schema1:url . kgr:pdbe.kb-graph-database.neo4j4 a schema1:GraphProduct ; rdfs:label "PDBe-KB Graph Database for Neo4J 4" ; dcterms:description "Neo4j graph database containing integrated PDBe-KB data with PDB entries, chains, entities, residues, and functional annotations. This version (neo4j.dump) is for Neo4J 4 and above." ; schema1:url . kgr:pdbe.kb-manual a schema1:DocumentationProduct ; rdfs:label "PDBe-KB User Manual" ; dcterms:description "User guides and documentation for PDBe-KB features and data access" ; schema1:url . kgr:pdbe.kb-portal a schema1:GraphicalInterface ; rdfs:label "PDBe-KB Web Portal" ; dcterms:description "PDBe-KB web portal providing access to enriched 3D structure data with functional annotations, including protein structures, ligand superpositions, and biological context" ; schema1:url . kgr:pdbe.kb-schema a schema1:DocumentationProduct ; rdfs:label "PDBe Graph Database Schema Explorer" ; dcterms:description "Interactive schema explorer for the PDBe-KB Neo4j graph database, showing nodes, relationships, and data structure" ; schema1:url . kgr:pdbe.sifts a schema1:Product ; rdfs:label "SIFTS Residue-level Mapping" ; dcterms:description "SIFTS (Structure Integration with Function, Taxonomy and Sequences) provides residue-level mapping between UniProt and PDB entries" ; schema1:url . kgr:pdro.owl a schema1:OntologyProduct ; rdfs:label "pdro.owl" ; dcterms:description "The Prescription of Drugs Ontology in OWL format" ; schema1:url . kgr:pdsp.data a schema1:Product ; rdfs:label "PDSP Binding Data" ; dcterms:description "Receptor binding affinity data for psychoactive compounds" ; schema1:url . kgr:pdsp.protocols a schema1:DocumentationProduct ; rdfs:label "PDSP Assay Protocols" ; dcterms:description "Screening assay protocols and methodologies" ; schema1:url . kgr:pdsp.web a schema1:GraphicalInterface ; rdfs:label "PDSP Ki Database" ; dcterms:description "Web interface for searching and browsing PDSP Ki Database" ; schema1:url . kgr:pdumdv.obo a schema1:OntologyProduct ; rdfs:label "pdumdv.obo" ; dcterms:description "Platynereis Developmental Stages in OBO format" ; schema1:url . kgr:pdumdv.owl a schema1:OntologyProduct ; rdfs:label "pdumdv.owl" ; dcterms:description "Platynereis Developmental Stages in OWL format" ; schema1:url . kgr:peco.obo a schema1:OntologyProduct ; rdfs:label "peco.obo" ; dcterms:description "Plant Experimental Conditions Ontology in OBO format" ; schema1:url . kgr:peco.owl a schema1:OntologyProduct ; rdfs:label "peco.owl" ; dcterms:description "Plant Experimental Conditions Ontology in OWL format" ; schema1:url . kgr:pensoft a "Organization" ; rdfs:label "Pensoft Publishers" . kgr:pf1600.archive a schema1:Product ; rdfs:label "pf1600 Data Archive" ; dcterms:description "Archive containing pf1600 dataset files and metadata hosted on GigaDB" ; schema1:url . kgr:pfam.a.data a schema1:Product ; rdfs:label "Pfam-A HMM data" ; dcterms:description "The Pfam HMM data for Pfam-A families, used for searching protein sequences against Pfam." ; schema1:url . kgr:pfam.a.fullalignment a schema1:Product ; rdfs:label "Pfam-A Full alignment" ; dcterms:description "Pfam-A Full alignment." ; schema1:url . kgr:pfam.a.models a schema1:Product ; rdfs:label "Pfam-A HMM Library" ; dcterms:description "The Pfam HMM library for Pfam-A families, used for searching protein sequences against Pfam." ; schema1:url . kgr:pfam.a.seedalignment a schema1:Product ; rdfs:label "Pfam-A Seed alignment" ; dcterms:description "Pfam-A Seed alignment." ; schema1:url . kgr:pfam.api a schema1:ProgrammingInterface ; rdfs:label "InterPro API" ; dcterms:description "REST API for programmatic access to Pfam data via the InterPro database." ; schema1:url . kgr:pfam.site a schema1:GraphicalInterface ; rdfs:label "Interface for the Pfam Database" ; dcterms:description "The core Pfam database containing protein families, multiple sequence alignments, and hidden Markov models." ; schema1:url . kgr:pfocr.api a schema1:ProgrammingInterface ; rdfs:label "PFOCR API" ; dcterms:description "API for accessing PFOCR extracted pathway data" ; schema1:url . kgr:pfocr.data a schema1:Product ; rdfs:label "PFOCR Pathway Data" ; dcterms:description "Extracted pathway information from literature figures" ; schema1:url . kgr:pfocr.web a schema1:GraphicalInterface ; rdfs:label "PFOCR Web Interface" ; dcterms:description "Web interface for searching and browsing extracted pathway figures" ; schema1:url . kgr:pgxmine.code a schema1:ProcessProduct ; rdfs:label "PGxMine Code" ; dcterms:description "Python codebase for extracting pharmacogenomic associations using text mining" ; schema1:url . kgr:pgxmine.collated a schema1:Product ; rdfs:label "PGxMine Collated Associations" ; dcterms:description "Collated chemical-variant associations with citation counts, normalized to PharmGKB, dbSNP, and Entrez identifiers" ; schema1:url . kgr:pgxmine.sentences a schema1:Product ; rdfs:label "PGxMine Sentences" ; dcterms:description "Supporting sentences for chemical-variant associations with publication metadata" ; schema1:url . kgr:pgxmine.viewer a schema1:GraphicalInterface ; rdfs:label "PGxMine Shiny Viewer" ; dcterms:description "Interactive Shiny web application for browsing and filtering text-mined pharmacogenomic associations" ; schema1:url . kgr:pharmacodb.api a schema1:ProgrammingInterface ; rdfs:label "PharmacoDB API" ; dcterms:description "RESTful JSON API providing programmatic access to cell lines, compounds, tissues, datasets, experiments, and intersections data" ; schema1:url . kgr:pharmacodb.documentation a schema1:DocumentationProduct ; rdfs:label "PharmacoDB Documentation" ; dcterms:description "Comprehensive user documentation covering search functionality, datasets, tissues, cell lines, experiments, genes, compounds, and biomarker discovery features" ; schema1:url . kgr:pharmacodb.portal a schema1:GraphicalInterface ; rdfs:label "PharmacoDB Web Application" ; dcterms:description "Primary web portal for searching and browsing cancer pharmacogenomics data across multiple integrated datasets with interactive dose-response curve visualization" ; schema1:url . kgr:pharmdb.graph a schema1:GraphProduct ; rdfs:label "PharmDB-K Graph" ; dcterms:description "Integrated pharmacological knowledge graph (PharmDB-K) of drugs, targets, diseases, and associations" . kgr:pharmdb.portal a schema1:GraphicalInterface ; rdfs:label "PharmDB Portal" ; dcterms:description "Legacy web portal for browsing PharmDB-K integrated pharmacological relationships" ; schema1:url . kgr:pharmgkb.automatedannotations a schema1:Product ; rdfs:label "PharmKB Automated Annotations" ; dcterms:description "Automatically identified possible relationships between variants and drugs from literature" ; schema1:url . kgr:pharmgkb.chemicals a schema1:Product ; rdfs:label "PharmKB Chemicals" ; dcterms:description "Summaries of chemical information annotated by PharmGKB" ; schema1:url . kgr:pharmgkb.clinicalannotations a schema1:Product ; rdfs:label "PharmKB Clinical Annotations" ; dcterms:description "Clinical annotation summaries" ; schema1:url . kgr:pharmgkb.clinicalannotations.loe a schema1:Product ; rdfs:label "PharmKB Clinical Annotations (LOE 1-2)" ; dcterms:description "Level of evidence 1-2 clinical annotation summaries" ; schema1:url . kgr:pharmgkb.clinicalvariants a schema1:Product ; rdfs:label "PharmKB Clinical Variants" ; dcterms:description "List of variant-drug pairs and level of evidence for all clinical annotations" ; schema1:url . kgr:pharmgkb.druglabels a schema1:Product ; rdfs:label "PharmKB Drug Label Annotations" ; dcterms:description "Drug label annotations" ; schema1:url . kgr:pharmgkb.drugs a schema1:Product ; rdfs:label "PharmKB Drugs" ; dcterms:description "Summaries of drug information annotated by PharmGKB" ; schema1:url . kgr:pharmgkb.genes a schema1:Product ; rdfs:label "PharmKB Genes" ; dcterms:description "Summary of gene information used by PharmGKB and annotations" ; schema1:url . kgr:pharmgkb.guidelineannotations a schema1:Product ; rdfs:label "PharmKB Clinical Guideline Annotations" ; dcterms:description "Detailed clinical guideline annotations" ; schema1:url . kgr:pharmgkb.haplotypefrequencies.allofus a schema1:Product ; rdfs:label "PharmKB AllOfUs Biobank Frequencies" ; dcterms:description "Haplotype, phenotype, and activity score frequencies from AllOfUs dataset using PharmCAT" ; schema1:url . kgr:pharmgkb.haplotypefrequencies.ukbb a schema1:Product ; rdfs:label "PharmKB UK Biobank Frequencies" ; dcterms:description "Haplotype frequencies from UK Biobank dataset using PharmCAT" ; schema1:url . kgr:pharmgkb.literatureoccurrences a schema1:Product ; rdfs:label "PharmKB Literature Occurrences" ; dcterms:description "List of objects that occur in PharmGKB literature annotations and pathways" ; schema1:url . kgr:pharmgkb.papers a schema1:Product ; rdfs:label "PharmKB Papers of Interest Archive" ; dcterms:description "Archive of papers of interest from May 2006 to April 2017" ; schema1:url . kgr:pharmgkb.pathways.biopax a schema1:Product ; rdfs:label "PharmKB Pathways (BioPax)" ; dcterms:description "Pathways data in BioPax XML format" ; schema1:url . kgr:pharmgkb.pathways.json a schema1:Product ; rdfs:label "PharmKB Pathways (JSON)" ; dcterms:description "Pathways data in JSON format" ; schema1:url . kgr:pharmgkb.pathways.tsv a schema1:Product ; rdfs:label "PharmKB Pathways (TSV)" ; dcterms:description "Pathways data in TSV format" ; schema1:url . kgr:pharmgkb.phenotypes a schema1:Product ; rdfs:label "PharmKB Phenotypes" ; dcterms:description "Summary of disease and other phenotypes annotated by PharmGKB" ; schema1:url . kgr:pharmgkb.relationships a schema1:Product ; rdfs:label "PharmKB Relationships" ; dcterms:description "Relationships summarized from PharmGKB annotations" ; schema1:url . kgr:pharmgkb.variantannotations a schema1:Product ; rdfs:label "PharmKB Variant Annotations" ; dcterms:description "Variant annotation summary" ; schema1:url . kgr:pharmgkb.variants a schema1:Product ; rdfs:label "PharmKB Variants" ; dcterms:description "Summary of variants annotated by PharmGKB that have been tracked in dbSNP" ; schema1:url . kgr:pharos.api a schema1:ProgrammingInterface ; rdfs:label "Pharos GraphQL API" ; dcterms:description "GraphQL API for programmatic access to Pharos and TCRD data enabling custom queries and integrations" ; schema1:url . kgr:pharos.api.docs a schema1:DocumentationProduct ; rdfs:label "Pharos API Documentation" ; dcterms:description "API documentation and usage examples for the Pharos GraphQL interface" ; schema1:url . kgr:pharos.docs a schema1:DocumentationProduct ; rdfs:label "Pharos Documentation" ; dcterms:description "Comprehensive documentation covering Pharos features, TCRD data structure, Target Development Levels, and data provenance" ; schema1:url . kgr:pharos.portal a schema1:GraphicalInterface ; rdfs:label "Pharos Web Portal" ; dcterms:description "Web interface for searching, browsing, and analyzing protein target information with advanced filtering, visualizations, and data export capabilities across the druggable genome" ; schema1:url . kgr:pharos.tcrd.download a schema1:Product ; rdfs:label "TCRD Database Downloads" ; dcterms:description "Target Central Resource Database (TCRD) downloadable database files containing comprehensive protein target information including druggability classifications, expression data, disease associations, and chemical probe information" ; schema1:url . kgr:pheknowlator.code a schema1:ProcessProduct ; rdfs:label "PheKnowLator code" ; dcterms:description "Code for generating PheKnowLator" ; schema1:url . kgr:pheknowlator.doc a schema1:DocumentationProduct ; rdfs:label "PheKnowLator Wiki" ; dcterms:description "User and developer documentation for PheKnowLator, including build recipes and usage guides" ; schema1:url . kgr:phenio.graph a schema1:GraphProduct ; rdfs:label "KG-Phenio" ; dcterms:description "PHENIO as a KGX graph" ; schema1:url . kgr:phenio.model a schema1:Product ; rdfs:label "phenio" ; dcterms:description "OWL version of phenio" ; schema1:url . kgr:phewascat.associations a schema1:Product ; rdfs:label "PheWAS Association Data" ; dcterms:description "PheWAS association results for SNPs from GWAS Catalog analyzed against EMR-derived phenotypes" ; schema1:url . kgr:phewascat.phecodes a schema1:Product ; rdfs:label "Phecode Maps" ; dcterms:description "Phecode mapping files for translating ICD codes to phenotypes used in PheWAS analysis" ; schema1:url . kgr:phewascat.portal a schema1:GraphicalInterface ; rdfs:label "PheWAS Catalog Portal" ; dcterms:description "Web portal for browsing and accessing PheWAS association results and analysis tools" ; schema1:url . kgr:phewascat.rpackage a schema1:ProgrammingInterface ; rdfs:label "PheWAS R Package" ; dcterms:description "R package for performing PheWAS analysis using the catalog data and methods" ; schema1:url . kgr:phipo.obo a schema1:OntologyProduct ; rdfs:label "phipo.obo" ; dcterms:description "Pathogen Host Interaction Phenotype Ontology in OBO format" ; schema1:url . kgr:phipo.owl a schema1:OntologyProduct ; rdfs:label "phipo.owl" ; dcterms:description "Pathogen Host Interaction Phenotype Ontology in OWL format" ; schema1:url . kgr:phosphositeplus.about a schema1:DocumentationProduct ; rdfs:label "PhosphoSitePlus About & Methods" ; dcterms:description "Methodology and curation overview including data sources and evidence criteria" ; schema1:url . kgr:phosphositeplus.downloads a schema1:Product ; rdfs:label "PhosphoSitePlus Downloads" ; dcterms:description "Bulk data downloads (PTM site tables, kinase–substrate data, regulatory sites, disease-associated mutations) requiring agreement to terms" ; schema1:url . kgr:phosphositeplus.portal a schema1:GraphicalInterface ; rdfs:label "PhosphoSitePlus Portal" ; dcterms:description "Web portal for browsing PTM sites, kinase–substrate relationships, motifs, mutations and protein pages" ; schema1:url . kgr:pirbase.browse a schema1:GraphicalInterface ; rdfs:label "piRBase Browse Interface" ; dcterms:description "Browse interface for exploring piRNAs organized by species" ; schema1:url . kgr:pirbase.cel-sequences a schema1:Product ; rdfs:label "C. elegans piRNA Sequences" ; dcterms:description "FASTA format sequences for C. elegans piRNAs (version 3.0)" ; schema1:url . kgr:pirbase.dme-bed a schema1:Product ; rdfs:label "Drosophila piRNA Coordinates (BDGP6)" ; dcterms:description "Genome coordinates for Drosophila piRNAs on BDGP6 assembly in BED format" ; schema1:url . kgr:pirbase.dme-gold a schema1:Product ; rdfs:label "Drosophila Gold Standard piRNAs" ; dcterms:description "Gold standard Drosophila piRNA sequences with high confidence annotations" ; schema1:url . kgr:pirbase.dme-sequences a schema1:Product ; rdfs:label "Drosophila piRNA Sequences" ; dcterms:description "FASTA format sequences for Drosophila melanogaster piRNAs (version 3.0)" ; schema1:url . kgr:pirbase.dre-sequences a schema1:Product ; rdfs:label "Zebrafish piRNA Sequences" ; dcterms:description "FASTA format sequences for zebrafish piRNAs" ; schema1:url . kgr:pirbase.epigenetics a schema1:GraphicalInterface ; rdfs:label "Epigenetics Interface" ; dcterms:description "Epigenetics interface for exploring methylation and other epigenetic features" ; schema1:url . kgr:pirbase.function a schema1:GraphicalInterface ; rdfs:label "piRNA Function Interface" ; dcterms:description "Function annotation interface for piRNA functional analysis" ; schema1:url . kgr:pirbase.genome a schema1:GraphicalInterface ; rdfs:label "Genome Browser Interface" ; dcterms:description "Genome browser interface for viewing piRNA genomic locations" ; schema1:url . kgr:pirbase.hsa-bed a schema1:Product ; rdfs:label "Human piRNA Coordinates (hg19)" ; dcterms:description "Genome coordinates for human piRNAs on hg19 assembly in BED format" ; schema1:url . kgr:pirbase.hsa-gold a schema1:Product ; rdfs:label "Human Gold Standard piRNAs" ; dcterms:description "Gold standard human piRNA sequences with high confidence annotations" ; schema1:url . kgr:pirbase.hsa-grch38-bed a schema1:Product ; rdfs:label "Human piRNA Coordinates (GRCh38)" ; dcterms:description "Genome coordinates for human piRNAs on GRCh38 assembly in BED format" ; schema1:url . kgr:pirbase.hsa-sequences a schema1:Product ; rdfs:label "Human piRNA Sequences" ; dcterms:description "FASTA format sequences for human piRNAs (version 3.0)" ; schema1:url . kgr:pirbase.mmu-bed a schema1:Product ; rdfs:label "Mouse piRNA Coordinates (GRCm38)" ; dcterms:description "Genome coordinates for mouse piRNAs on GRCm38 assembly in BED format" ; schema1:url . kgr:pirbase.mmu-gold a schema1:Product ; rdfs:label "Mouse Gold Standard piRNAs" ; dcterms:description "Gold standard mouse piRNA sequences with high confidence annotations" ; schema1:url . kgr:pirbase.mmu-sequences a schema1:Product ; rdfs:label "Mouse piRNA Sequences" ; dcterms:description "FASTA format sequences for mouse piRNAs (version 3.0)" ; schema1:url . kgr:pirbase.portal a schema1:GraphicalInterface ; rdfs:label "piRBase Portal" ; dcterms:description "Web portal for searching and browsing piRNA sequences by identifier or keyword" ; schema1:url . kgr:pirbase.rno-sequences a schema1:Product ; rdfs:label "Rat piRNA Sequences" ; dcterms:description "FASTA format sequences for rat piRNAs" ; schema1:url . kgr:pirbase.tools a schema1:GraphicalInterface ; rdfs:label "piRBase Tools" ; dcterms:description "Tools interface for piRNA analysis utilities" ; schema1:url . kgr:pirbase.tutorial a schema1:DocumentationProduct ; rdfs:label "piRBase Tutorial" ; dcterms:description "Tutorial and user manual for piRBase" ; schema1:url . kgr:pistoia-pgo.core_concepts a schema1:DocumentationProduct ; rdfs:label "PGO Core Concepts (Version 1.0)" ; dcterms:description "List of PGO Version 1.0 core concepts defining essential entities for pharmaceutical R&D data exchange" ; schema1:url . kgr:pistoia-pgo.documentation a schema1:DocumentationProduct ; rdfs:label "PGO Documentation Website" ; dcterms:description "Documentation website for PGO including core concepts, process descriptions, and use cases" ; schema1:url . kgr:pistoia-pgo.github a schema1:OntologyProduct ; rdfs:label "PGO GitHub Repository" ; dcterms:description "GitHub repository containing the PGO core concepts, documentation, and LinkML schemas" ; schema1:url . kgr:pistoia-pgo.use_cases a schema1:DocumentationProduct ; rdfs:label "PGO Use Cases" ; dcterms:description "High-level use cases demonstrating PGO applications in pharmaceutical data exchange" ; schema1:url . kgr:plana.obo a schema1:OntologyProduct ; rdfs:label "plana.obo" ; dcterms:description "planaria-ontology in OBO format" ; schema1:url . kgr:plana.owl a schema1:OntologyProduct ; rdfs:label "plana.owl" ; dcterms:description "planaria-ontology in OWL format" ; schema1:url . kgr:planp.obo a schema1:OntologyProduct ; rdfs:label "planp.obo" ; dcterms:description "Planarian Phenotype Ontology in OBO format" ; schema1:url . kgr:planp.owl a schema1:OntologyProduct ; rdfs:label "planp.owl" ; dcterms:description "Planarian Phenotype Ontology in OWL format" ; schema1:url . kgr:plant-reactome.api a schema1:ProgrammingInterface ; rdfs:label "Plant Reactome REST API" ; dcterms:description "RESTful Content Service API for programmatic access to pathway data, entities, and structures in JSON format" ; schema1:url . kgr:plant-reactome.biopax a schema1:Product ; rdfs:label "Plant Reactome BioPAX3 Data" ; dcterms:description "BioPAX3 format pathway data downloads organized by plant species" ; schema1:url . kgr:plant-reactome.mappings a schema1:MappingProduct ; rdfs:label "Plant Reactome Identifier Mappings" ; dcterms:description "Identifier mapping files linking stable pathway identifiers with associated genes, reactions, and pathways across plant species" ; schema1:url . kgr:plant-reactome.png a schema1:Product ; rdfs:label "Plant Reactome PNG Diagrams" ; dcterms:description "PNG raster image format pathway diagrams for static pathway visualization" ; schema1:url . kgr:plant-reactome.portal a schema1:GraphicalInterface ; rdfs:label "Plant Reactome Web Portal" ; dcterms:description "Web portal for browsing, searching, and visualizing plant pathway data with interactive pathway diagrams and comparative analysis tools" ; schema1:url . kgr:plant-reactome.sbgn a schema1:Product ; rdfs:label "Plant Reactome SBGN Diagrams" ; dcterms:description "SBGN format pathway diagrams and pathway descriptions for plant pathway visualization" ; schema1:url . kgr:plant-reactome.svg a schema1:Product ; rdfs:label "Plant Reactome SVG Diagrams" ; dcterms:description "Scalable Vector Graphics (SVG) format pathway diagrams for interactive and high-quality pathway visualization" ; schema1:url . kgr:plncdb.blast a schema1:GraphicalInterface ; rdfs:label "PLncDB BLAST" ; dcterms:description "BLAST search interface for sequence similarity searches against plant lncRNA database" ; schema1:url . kgr:plncdb.efp-browser a schema1:GraphicalInterface ; rdfs:label "PLncDB eFP Browser" ; dcterms:description "eFP Browser for visualizing tissue-specific expression patterns of individual lncRNAs" ; schema1:url . kgr:plncdb.epexplorer a schema1:GraphicalInterface ; rdfs:label "PLncDB EPexplorer" ; dcterms:description "EPexplorer tool for batch analysis and visualization of lncRNA expression landscapes across tissues" ; schema1:url . kgr:plncdb.ftp a schema1:Product ; rdfs:label "PLncDB FTP Download" ; dcterms:description "FTP download service providing bulk access to lncRNA sequences, annotations, expression data, and epigenetic information" ; schema1:url . kgr:plncdb.jbrowse a schema1:GraphicalInterface ; rdfs:label "PLncDB JBrowse" ; dcterms:description "JBrowse genome browser for visualizing lncRNA locations, expression patterns, and epigenetic modifications" ; schema1:url . kgr:plncdb.portal a schema1:GraphicalInterface ; rdfs:label "PLncDB Web Portal" ; dcterms:description "Web interface for browsing, searching, and accessing plant lncRNA data with multiple search engines and visualization tools" ; schema1:url . kgr:po.obo a schema1:OntologyProduct ; rdfs:label "po.obo" ; dcterms:description "Plant Ontology in OBO format" ; schema1:url . kgr:po.owl a schema1:OntologyProduct ; rdfs:label "po.owl" ; dcterms:description "Plant Ontology in OWL format" ; schema1:url . kgr:pombase.genes a schema1:Product ; rdfs:label "PomBase gene names" ; dcterms:description "Tab-delimited file of systematic ID, primary gene name (where assigned), and all synonyms for each gene" ; schema1:url . kgr:poro.obo a schema1:OntologyProduct ; rdfs:label "poro.obo" ; dcterms:description "Porifera Ontology in OBO format" ; schema1:url . kgr:poro.owl a schema1:OntologyProduct ; rdfs:label "poro.owl" ; dcterms:description "Porifera Ontology in OWL format" ; schema1:url . kgr:ppo.owl a schema1:OntologyProduct ; rdfs:label "ppo.owl" ; dcterms:description "Plant Phenology Ontology in OWL format" ; schema1:url . kgr:pr-asserted.obo a schema1:OntologyProduct ; rdfs:label "pro_nonreasoned.obo" ; dcterms:description "PRO without reasoning applied, OBO format." ; schema1:url . kgr:pr-asserted.owl a schema1:OntologyProduct ; rdfs:label "pro_nonreasoned.owl" ; dcterms:description "PRO without reasoning applied, OWL format. Add '.gz' for compressed." ; schema1:url . kgr:pr.obo a schema1:OntologyProduct ; rdfs:label "pro_reasoned.obo" ; dcterms:description "PRO after reasoning has been applied, OBO format." ; schema1:url . kgr:pr.owl a schema1:OntologyProduct ; rdfs:label "pro_reasoned.owl" ; dcterms:description "PRO after reasoning has been applied, OWL format. Add '.gz' for compressed." ; schema1:url . kgr:preppi.download a schema1:Product ; rdfs:label "PrePPI High-Confidence Interactome" ; dcterms:description "High-confidence PrePPI interactome dataset for download" ; schema1:url . kgr:preppi.search a schema1:GraphicalInterface ; rdfs:label "PrePPI Search Interface" ; dcterms:description "Web search interface for querying PrePPI predicted protein-protein interactions by UniProt accession or gene name" ; schema1:url . kgr:primekg.graph a schema1:GraphProduct ; rdfs:label "PrimeKG Full Dataset" ; dcterms:description "The full PrimeKG dataset containing disease relationships." ; schema1:url . kgr:prism.api a schema1:ProgrammingInterface ; rdfs:label "DepMap API (PRISM data)" ; dcterms:description "API access to PRISM drug screening data" ; schema1:url . kgr:prism.datasets a schema1:Product ; rdfs:label "PRISM Drug Sensitivity Datasets" ; dcterms:description "Downloadable drug sensitivity screening data from PRISM assays" ; schema1:url . kgr:prism.portal a schema1:GraphicalInterface ; rdfs:label "PRISM Data Portal" ; dcterms:description "Web interface for exploring PRISM drug screening data through DepMap" ; schema1:url . kgr:proco.owl a schema1:OntologyProduct ; rdfs:label "proco.owl" ; dcterms:description "Process Chemistry Ontology in OWL format" ; schema1:url . kgr:progenomes.pg4.ncbi-taxonomy a schema1:Product ; rdfs:label "proGenomes v4 NCBI Taxonomy Table" ; dcterms:description "NCBI taxonomy mapping table for proGenomes v4 entries." ; schema1:url . kgr:progenomes.pg4.rep-proteins a schema1:Product ; rdfs:label "proGenomes v4 Representative Proteins" ; dcterms:description "Representative protein FASTA set for proGenomes v4." ; schema1:url . kgr:progenomes.portal a schema1:GraphicalInterface ; rdfs:label "proGenomes Portal" ; dcterms:description "Main proGenomes web interface for exploring microbial genomes and clusters." ; schema1:url . kgr:progeny.docs a schema1:DocumentationProduct ; rdfs:label "PROGENy Documentation" ; dcterms:description "Documentation website for PROGENy with installation instructions, vignettes, and function reference" ; schema1:url . kgr:progeny.rpackage a schema1:ProgrammingInterface ; rdfs:label "PROGENy R Package" ; dcterms:description "R package containing pathway signatures for 14 signaling pathways in human and mouse, available through Bioconductor" ; schema1:url . kgr:protcid.database a schema1:Product ; rdfs:label "ProtCID Database" ; dcterms:description "Database containing protein-protein interfaces, domain-domain interfaces, protein-peptide interfaces, and protein-ligand interactions based on structural data from the PDB." . kgr:protcid.site a schema1:GraphicalInterface ; rdfs:label "ProtCID Web Interface" ; dcterms:description "Web interface for searching and visualizing protein interaction data from ProtCID." ; schema1:url . kgr:proton.browser a schema1:GraphicalInterface ; rdfs:label "PROTON Browser on TriplyDB" ; dcterms:description "Interactive browser for exploring and navigating PROTON ontology structure, classes, and relationships on TriplyDB platform" ; schema1:url . kgr:proton.documentation a schema1:DocumentationProduct ; rdfs:label "PROTON Documentation" ; dcterms:description "Comprehensive technical documentation and class reference for PROTON ontology covering all modules, properties, and usage guidelines" ; schema1:url . kgr:proton.ontology a schema1:OntologyProduct ; rdfs:label "PROTON Ontology OWL Distribution" ; dcterms:description "Complete PROTON 3.0 Beta ontology specification in OWL Lite/RDF-XML format, including all four modules (System, Top, Extent, KM) with comprehensive entity class definitions and properties" ; schema1:url . kgr:proton.top a schema1:OntologyProduct ; rdfs:label "PROTON Top Module" ; dcterms:description "PROTON Top Module - the primary upper-level ontology module containing core entity types (Person, Location, Organization), temporal concepts, quantitative domains, and abstract concepts" ; schema1:url . kgr:psdo.owl a schema1:OntologyProduct ; rdfs:label "psdo.owl" ; dcterms:description "Performance Summary Display Ontology in OWL format" ; schema1:url . kgr:pso.obo a schema1:OntologyProduct ; rdfs:label "pso.obo" ; dcterms:description "Plant Stress Ontology in OBO format" ; schema1:url . kgr:pso.owl a schema1:OntologyProduct ; rdfs:label "pso.owl" ; dcterms:description "Plant Stress Ontology in OWL format" ; schema1:url . kgr:psygenet.genedisease a schema1:Product ; rdfs:label "PsyGeNET Gene-Disease Associations" ; dcterms:description "Gene-disease associations for psychiatric disorders, as described in \"PsyGeNET: a knowledge platform on psychiatric disorders and their genes\" (PMCID: PMC4565028). " ; schema1:url . kgr:pubchem.bioassay.asn a schema1:Product ; rdfs:label "PubChem BioAssay ASN" ; dcterms:description "PubChem BioAssay data in ASN.1 format" ; schema1:url . kgr:pubchem.bioassay.xml a schema1:Product ; rdfs:label "PubChem BioAssay XML" ; dcterms:description "PubChem BioAssay data in XML format" ; schema1:url . kgr:pubchem.compounds.asn a schema1:Product ; rdfs:label "PubChem Compounds ASN" ; dcterms:description "Compound structures, properties, and other information in ASN.1 format" ; schema1:url . kgr:pubchem.compounds.sdf a schema1:Product ; rdfs:label "PubChem Compounds SDF" ; dcterms:description "Compound structures, properties, and other information in SDF format" ; schema1:url . kgr:pubchem.pug.rest a schema1:ProgrammingInterface ; rdfs:label "PubChem PUG REST API" ; dcterms:description "The PubChem Power User Gateway (PUG) REST service" ; schema1:url . kgr:pubchem.substances.asn a schema1:Product ; rdfs:label "PubChem Substances ASN" ; dcterms:description "PubChem substance information in ASN.1 format" ; schema1:url . kgr:pubchem.substances.sdf a schema1:Product ; rdfs:label "PubChem Substances SDF" ; dcterms:description "PubChem substance information in SDF format" ; schema1:url . kgr:pubmed.advanced.search a schema1:GraphicalInterface ; rdfs:label "PubMed Advanced Search" ; dcterms:description "Advanced search builder with field-specific queries, search history, and Boolean operators for complex literature searches" ; schema1:url . kgr:pubmed.baseline a schema1:Product ; rdfs:label "PubMed Annual Baseline Files" ; dcterms:description "Annual baseline set of PubMed citation records in XML format providing complete snapshot of the MEDLINE database" ; schema1:url . kgr:pubmed.clinical.queries a schema1:GraphicalInterface ; rdfs:label "PubMed Clinical Queries" ; dcterms:description "Specialized clinical queries interface with pre-defined search filters for clinical studies, systematic reviews, and medical genetics" ; schema1:url . kgr:pubmed.dtd a schema1:DocumentationProduct ; rdfs:label "PubMed DTD Documentation" ; dcterms:description "PubMed DTD documentation with annotations and examples for all XML elements and attributes" ; schema1:url . kgr:pubmed.eutils a schema1:ProgrammingInterface ; rdfs:label "PubMed E-utilities API" ; dcterms:description "Entrez Programming Utilities (E-utilities) API providing programmatic access to PubMed data with eight server-side programs for querying and retrieving citations" ; schema1:url . kgr:pubmed.help a schema1:DocumentationProduct ; rdfs:label "PubMed Help Documentation" ; dcterms:description "Comprehensive PubMed help documentation including user guides, FAQs, tutorials, and search tips" ; schema1:url . kgr:pubmed.portal a schema1:GraphicalInterface ; rdfs:label "PubMed Web Portal" ; dcterms:description "Web interface for searching and browsing PubMed's 39+ million biomedical literature citations with advanced search, clinical queries, and MeSH database integration" ; schema1:url . kgr:pubmed.updates a schema1:Product ; rdfs:label "PubMed Daily Update Files" ; dcterms:description "Daily update files containing new, revised, and deleted PubMed citations in XML format" ; schema1:url . kgr:pubmedcentral.ftp a schema1:Product ; rdfs:label "PMC FTP Archive" ; dcterms:description "NCBI FTP site for bulk PubMed Central archive and OA subset files." ; schema1:url . kgr:pubmedcentral.oa-api a schema1:ProgrammingInterface ; rdfs:label "PMC Open Access API" ; dcterms:description "Open Access service endpoint for discovering and retrieving OA-subset article packages." ; schema1:url . kgr:pubmedcentral.portal a schema1:GraphicalInterface ; rdfs:label "PMC Portal" ; dcterms:description "Full-text biomedical and life sciences literature interface maintained by NCBI." ; schema1:url . kgr:pubtator.api a schema1:ProgrammingInterface ; rdfs:label "PubTator 3.0 API" ; dcterms:description "PubTator 3.0 API for programmatic access to entity annotation, relation search, and other features" ; schema1:url . kgr:pubtator.bulk a schema1:Product ; rdfs:label "PubTator 3.0 Bulk Downloads" ; dcterms:description "Bulk downloads of annotated articles and extraction summaries for entities and relations" ; schema1:url . kgr:pubtator.site a schema1:GraphicalInterface ; rdfs:label "PubTator 3.0 Web Interface" ; dcterms:description "Web interface for exploring PubTator annotations with semantic and relation search capabilities" ; schema1:url . kgr:pw.obo a schema1:OntologyProduct ; rdfs:label "pw.obo" ; dcterms:description "Pathway ontology in OBO format" ; schema1:url . kgr:pw.owl a schema1:OntologyProduct ; rdfs:label "pw.owl" ; dcterms:description "Pathway ontology in OWL format" ; schema1:url . kgr:rampdb.api a schema1:ProgrammingInterface ; rdfs:label "RaMP-DB API" ; dcterms:description "Programmatic interface for accessing RaMP-DB integrated metabolomic pathway data and performing enrichment analyses." ; schema1:url . kgr:rbo.json a schema1:OntologyProduct ; rdfs:label "rbo.json" ; dcterms:description "Radiation Biology Ontology in JSON format" ; schema1:url . kgr:rbo.obo a schema1:OntologyProduct ; rdfs:label "rbo.obo" ; dcterms:description "Radiation Biology Ontology in OBO format" ; schema1:url . kgr:rbo.owl a schema1:OntologyProduct ; rdfs:label "rbo.owl" ; dcterms:description "Radiation Biology Ontology in OWL format" ; schema1:url . kgr:rbo.rbo-base.json a schema1:OntologyProduct ; rdfs:label "rbo.rbo-base.json" ; dcterms:description "Radiation Biology Ontology in JSON format" ; schema1:url . kgr:rbo.rbo-base.obo a schema1:OntologyProduct ; rdfs:label "rbo.rbo-base.obo" ; dcterms:description "Radiation Biology Ontology in OBO format" ; schema1:url . kgr:rbo.rbo-base.owl a schema1:OntologyProduct ; rdfs:label "rbo.rbo-base.owl" ; dcterms:description "Radiation Biology Ontology in OWL format" ; schema1:url . kgr:rdbridge.graph a schema1:GraphProduct ; rdfs:label "RDBridge Knowledge Graph" ; dcterms:description "Knowledge graph connecting rare diseases with genes, drugs, pathways, and medical images" . kgr:rdbridge.literaturedatabase a schema1:Product ; rdfs:label "RDBridge Literature Database" ; dcterms:description "Curated collection of 235,631 scientific publications related to rare diseases" . kgr:rdbridge.webinterface a schema1:GraphicalInterface ; rdfs:label "RDBridge Web Interface" ; dcterms:description "Graphical interface for exploring the RDBridge knowledge graph of rare diseases" ; schema1:url . kgr:rdp.classifier a schema1:ProcessProduct ; rdfs:label "RDP Classifier (stand-alone)" ; dcterms:description "Stand-alone version of the RDP Classifier for taxonomic assignment of rRNA sequences. Available via Sourceforge." ; schema1:url . kgr:rdp.tools a schema1:ProcessProduct ; rdfs:label "RDP Tools (command-line)" ; dcterms:description "Command-line tools for rRNA sequence analysis, installation instructions and Docker images available via community tutorials." ; schema1:url . kgr:reacto.go-lego-reacto.owl a schema1:OntologyProduct ; rdfs:label "GO LEGO REACTO Integrated Ontology" ; dcterms:description "Integrated GO-LEGO-REACTO ontology for logical inference workflows." ; schema1:url . kgr:reacto.owl a schema1:OntologyProduct ; rdfs:label "REACTO OWL Ontology" ; dcterms:description "Primary REACTO ontology file representing Reactome entities in OWL." ; schema1:url . kgr:reactome.api a schema1:ProgrammingInterface ; rdfs:label "Reactome REST API" ; dcterms:description "RESTful web service API for programmatic access to Reactome pathway data and content, supporting JSON responses for web applications and tools" ; schema1:url . kgr:reactome.biopax a schema1:GraphProduct ; rdfs:label "Reactome BioPAX Format" ; dcterms:description "Complete Reactome pathway data in BioPAX (Biological Pathway Exchange) format, the standard RDF/OWL-based language for representing biological pathways at molecular and cellular levels" ; schema1:url . kgr:reactome.browser a schema1:GraphicalInterface ; rdfs:label "Reactome Pathway Browser" ; dcterms:description "Interactive pathway browser providing visual exploration of human biological pathways, reactions, and molecular interactions with integrated visualization tools" ; schema1:url . kgr:reactome.data.human a schema1:Product ; rdfs:label "Reactome Human from BioPAX, sqlite" ; dcterms:description "Conversion from BioPAX, human subset" ; schema1:url . kgr:reactome.flat a schema1:GraphProduct ; rdfs:label "Reactome Flat Files" ; dcterms:description "Reactome pathway and interaction data in flat file format (TSV), including curated protein complex compositions and pathway-gene associations" ; schema1:url . kgr:reactome.neo4j a schema1:GraphProduct ; rdfs:label "Reactome Neo4j Graph Database" ; dcterms:description "Complete Reactome pathway database in native Neo4j graph database format, supporting interactive exploration and complex relationship queries" ; schema1:url . kgr:reactome.rdf a schema1:GraphProduct ; rdfs:label "Reactome RDF/XML Format" ; dcterms:description "Reactome data in RDF/XML format for semantic web integration and knowledge graph applications" ; schema1:url . kgr:reactome.sbml a schema1:GraphProduct ; rdfs:label "Reactome SBML Format" ; dcterms:description "Reactome pathway data in SBML (Systems Biology Markup Language) format for computational modeling and systems biology applications, including kinetic information" ; schema1:url . kgr:rediportal.portal a schema1:GraphicalInterface ; rdfs:label "REDIportal Web Portal" ; dcterms:description "Web interface for browsing A-to-I RNA editing sites; supports Search Positions, Search Sample (GTEx/TCGA), Search dsRNA, and Gene View with integrated links to Ensembl, RNAcentral, UniProt, and PRIDE." ; schema1:url . kgr:redrugs.api a schema1:ProgrammingInterface ; rdfs:label "ReDrugs API" ; dcterms:description "SADI web services API for querying the knowledge graph including resource search, interaction lookup, and network expansion" ; schema1:url . kgr:redrugs.web a schema1:GraphicalInterface ; rdfs:label "ReDrugs Web Interface" ; dcterms:description "Interactive web interface for exploring drug-disease networks with probabilistic filtering and graph visualization" ; schema1:url . kgr:renci a "Organization" ; rdfs:label "RENCI (Renaissance Computing Institute)" . kgr:repodb.web_interface a schema1:GraphicalInterface ; rdfs:label "RepoDB Web Interface" ; dcterms:description "Interactive web interface for exploring RepoDB data with drug-centric and disease-centric search capabilities" ; schema1:url . kgr:repohub.about a schema1:DocumentationProduct ; rdfs:label "About the Repurposing Hub" ; dcterms:description "About page with detailed information on the Drug Repurposing Hub history, team, and usage" ; schema1:url . kgr:repohub.case-studies a schema1:DocumentationProduct ; rdfs:label "Case Studies" ; dcterms:description "Case studies demonstrating applications of the Drug Repurposing Hub" ; schema1:url . kgr:repohub.data-portal a schema1:GraphicalInterface ; rdfs:label "Data Portal" ; dcterms:description "Interactive data portal for searching and exploring compound annotations, targets, mechanisms, and indications" ; schema1:url . kgr:repohub.drug-info a schema1:Product ; rdfs:label "Drug Information Download" ; dcterms:description "Downloadable drug information file with compound metadata including names, structures, targets, mechanisms, and indications" ; schema1:url . kgr:repohub.followup-compounds a schema1:Product ; rdfs:label "Follow-up Compound Collection" ; dcterms:description "Follow-up compound collection of approximately 2,400 compounds available for secondary studies" ; schema1:url . kgr:repohub.intake-policy a schema1:DocumentationProduct ; rdfs:label "Compound Intake Policy" ; dcterms:description "Policy document for compound intake and donation to the collection" ; schema1:url . kgr:repohub.portal a schema1:GraphicalInterface ; rdfs:label "Repurposing Hub Portal" ; dcterms:description "Web portal for exploring the Drug Repurposing Hub compound collection and annotations" ; schema1:url . kgr:repohub.repo1-library a schema1:Product ; rdfs:label "REPO1 Dilution Series Library" ; dcterms:description "REPO1 subset library available in 5-point, 10-fold dilution series as single-use assay-ready plates" ; schema1:url . kgr:repohub.sample-info a schema1:Product ; rdfs:label "Sample Information Download" ; dcterms:description "Downloadable sample information file with compound library details and annotations" ; schema1:url . kgr:repohub.screening-info a schema1:DocumentationProduct ; rdfs:label "Screening Information" ; dcterms:description "Information about conducting screens with the Drug Repurposing Hub library" ; schema1:url . kgr:repohub.screening-library a schema1:Product ; rdfs:label "Screening Library" ; dcterms:description "Physical screening library of 5,506 compounds (90% FDA-approved or in clinical trials) available as assay-ready plates" ; schema1:url . kgr:reprotox-kg.api a schema1:ProgrammingInterface ; rdfs:label "ReproTox-KG API" ; dcterms:description "API for programmatic access to reproductive toxicology data and relationships" ; schema1:url . kgr:reprotox-kg.dataset a schema1:Product ; rdfs:label "ReproTox Dataset" ; dcterms:description "Curated dataset of reproductive toxicity studies with standardized endpoints and exposure conditions" ; schema1:url . kgr:reprotox-kg.graph a schema1:GraphProduct ; rdfs:label "ReproTox-KG Database" ; dcterms:description "Neo4j database containing integrated reproductive toxicology data with chemicals, endpoints, and mechanistic pathways" . kgr:reprotox-kg.portal a schema1:GraphicalInterface ; rdfs:label "ReproTox-KG Explorer" ; dcterms:description "Web portal for exploring reproductive toxicology knowledge with chemical-outcome relationship visualization" ; schema1:url . kgr:retriever.code a schema1:ProcessProduct ; rdfs:label "Retriever Source Repository" ; dcterms:description "Retriever source code implementing query deduplication, caching, and TRAPI aggregation workflows." ; schema1:url . kgr:retriever.docs a schema1:DocumentationProduct ; rdfs:label "Retriever Documentation" ; dcterms:description "Project README with deployment and usage instructions for Retriever." ; schema1:url . kgr:rex.owl a schema1:OntologyProduct ; rdfs:label "rex.owl" ; dcterms:description "Physico-chemical process in OWL format" ; schema1:url . kgr:rfam.api a schema1:ProgrammingInterface ; rdfs:label "Rfam REST API" ; dcterms:description "REST API for programmatic access to Rfam data" ; schema1:url . kgr:rfam.cm-models a schema1:Product ; rdfs:label "Rfam Covariance Models" ; dcterms:description "Covariance models for all RNA families in CM format" ; schema1:url . kgr:rfam.docs a schema1:DocumentationProduct ; rdfs:label "Rfam Documentation" ; dcterms:description "Comprehensive documentation for Rfam database and tools" ; schema1:url . kgr:rfam.fasta a schema1:Product ; rdfs:label "Rfam FASTA Sequences" ; dcterms:description "FASTA format sequences for all RNA families" ; schema1:url . kgr:rfam.ftp a schema1:Product ; rdfs:label "Rfam FTP Archive" ; dcterms:description "FTP archive with covariance models, sequence alignments, and database files" ; schema1:url . kgr:rfam.full-alignments a schema1:Product ; rdfs:label "Rfam FULL Alignments" ; dcterms:description "FULL alignments for all RNA families" ; schema1:url . kgr:rfam.pdb-mappings a schema1:MappingProduct ; rdfs:label "Rfam PDB Mappings" ; dcterms:description "PDB structure mappings showing RNA families with 3D structures" ; schema1:url . kgr:rfam.portal a schema1:GraphicalInterface ; rdfs:label "Rfam Web Portal" ; dcterms:description "Web portal for searching and browsing RNA families" ; schema1:url . kgr:rfam.public-db a schema1:DataModelProduct ; rdfs:label "Rfam Public MySQL Database" ; dcterms:description "Public MySQL database for direct SQL access to Rfam data" ; schema1:url . kgr:rfam.seed-alignments a schema1:Product ; rdfs:label "Rfam SEED Alignments" ; dcterms:description "SEED alignments for all RNA families in Stockholm format" ; schema1:url . kgr:ribocentre.portal a schema1:GraphicalInterface ; rdfs:label "Ribocentre Web Portal" ; dcterms:description "Web portal for searching and browsing ribozyme data including sequences, structures, catalytic information, and publications" ; schema1:url . kgr:ribocentre.publications a schema1:DocumentationProduct ; rdfs:label "Publications Database" ; dcterms:description "Comprehensive publication database with 293+ entries of ribozyme research articles" ; schema1:url . kgr:ribocentre.ribozymes a schema1:GraphicalInterface ; rdfs:label "Ribozyme Browser" ; dcterms:description "Browse comprehensive information about different ribozyme types with timelines, structures, and mechanisms" ; schema1:url . kgr:ribocentre.structures a schema1:GraphicalInterface ; rdfs:label "Structure Visualization" ; dcterms:description "Interactive 2D and 3D structure visualization tools for ribozymes" ; schema1:url . kgr:ribovision.2d-maps a schema1:Product ; rdfs:label "2D Structure Maps" ; dcterms:description "Pre-generated 2D layouts of ribosomal RNAs exported from PDBe API" ; schema1:url . kgr:ribovision.2d-viewer a schema1:GraphicalInterface ; rdfs:label "2D RNA Topology Viewer" ; dcterms:description "2D RNA topology viewer for visualizing ribosomal RNA secondary structures" ; schema1:url . kgr:ribovision.3d-structures a schema1:Product ; rdfs:label "3D Structure Data" ; dcterms:description "3D ribosome structures fetched from RCSB PDB with coordinate data" ; schema1:url . kgr:ribovision.3d-viewer a schema1:GraphicalInterface ; rdfs:label "3D Structure Viewer" ; dcterms:description "MolStar-based 3D structure viewer for interactive exploration of ribosome structures" ; schema1:url . kgr:ribovision.about a schema1:DocumentationProduct ; rdfs:label "About RiboVision" ; dcterms:description "About page with introduction to RiboVision 2 and contributors" ; schema1:url . kgr:ribovision.advanced-features a schema1:DocumentationProduct ; rdfs:label "Advanced Features Guide" ; dcterms:description "Documentation for advanced features and analysis capabilities" ; schema1:url . kgr:ribovision.alignments a schema1:Product ; rdfs:label "rRNA Alignments" ; dcterms:description "Multiple sequence alignments for ribosomal RNAs generated according to DESIRE methodology" ; schema1:url . kgr:ribovision.basic-navigation a schema1:DocumentationProduct ; rdfs:label "Basic Navigation Guide" ; dcterms:description "Documentation for basic navigation and interface usage" ; schema1:url . kgr:ribovision.chemical-modifications a schema1:Product ; rdfs:label "Chemical Modifications" ; dcterms:description "Chemical modification data extracted from PDB CIF files" ; schema1:url . kgr:ribovision.data-documentation a schema1:DocumentationProduct ; rdfs:label "Data Documentation" ; dcterms:description "Detailed documentation about RiboVision data sources and computational methods" ; schema1:url . kgr:ribovision.examples a schema1:DocumentationProduct ; rdfs:label "Examples Gallery" ; dcterms:description "Gallery of examples demonstrating RiboVision capabilities" ; schema1:url . kgr:ribovision.expansion-segments a schema1:Product ; rdfs:label "Expansion Segment Annotations" ; dcterms:description "Expansion segment annotations from evolutionary accretion model" ; schema1:url . kgr:ribovision.helices a schema1:Product ; rdfs:label "Helix Annotations" ; dcterms:description "Helix definitions and annotations for ribosomal RNA structures" ; schema1:url . kgr:ribovision.msa-viewer a schema1:GraphicalInterface ; rdfs:label "Alignment Viewer" ; dcterms:description "MSA viewer for exploring multiple sequence alignments of ribosomal RNA" ; schema1:url . kgr:ribovision.nucleotide-frequencies a schema1:Product ; rdfs:label "Nucleotide Frequencies" ; dcterms:description "Nucleotide frequency data from MSA columns with gap-adjusted probabilities" ; schema1:url . kgr:ribovision.phylogeny-browser a schema1:GraphicalInterface ; rdfs:label "Phylogenetic Browser" ; dcterms:description "Interactive phylogenetic browser for exploring ribosomal RNA sequences across 152 species" ; schema1:url . kgr:ribovision.portal a schema1:GraphicalInterface ; rdfs:label "RiboVision 2.0 Portal" ; dcterms:description "Main web portal for RiboVision 2.0 with advanced visualization of RNA molecules" ; schema1:url . kgr:ribovision.protein-contacts a schema1:Product ; rdfs:label "RNA-Protein Contacts" ; dcterms:description "RNA-protein contact data computed using BioPython NeighborSearch with 3.5Å cutoff" ; schema1:url . kgr:ribovision.sequences a schema1:Product ; rdfs:label "rRNA Sequence Database" ; dcterms:description "Database of 152 ribosomal RNA sequences from the DESIRE dataset organized by phylogeny" ; schema1:url . kgr:ribovision.shannon-entropy a schema1:Product ; rdfs:label "Shannon Entropy Data" ; dcterms:description "Shannon entropy calculations for sequence conservation analysis" ; schema1:url . kgr:ribovision.twincons a schema1:Product ; rdfs:label "TwinCons Comparison Data" ; dcterms:description "TwinCons scores for two-group phylogenetic comparisons" ; schema1:url . kgr:ribovision.user-upload-guide a schema1:DocumentationProduct ; rdfs:label "User Upload Mode Guide" ; dcterms:description "User guide for upload mode with custom structures and alignments" ; schema1:url . kgr:rnao.obo a schema1:OntologyProduct ; rdfs:label "rnao.obo" ; dcterms:description "RNA ontology in OBO format" ; schema1:url . kgr:rnao.owl a schema1:OntologyProduct ; rdfs:label "rnao.owl" ; dcterms:description "RNA ontology in OWL format" ; schema1:url . kgr:ro.core.owl a schema1:OntologyProduct ; rdfs:label "RO Core relations" ; dcterms:description "Minimal subset intended to work with BFO-classes" ; schema1:url . kgr:ro.json a schema1:OntologyProduct ; rdfs:label "Relation Ontology in obojson format" ; dcterms:description "Relation Ontology in obojson format" ; schema1:url . kgr:ro.obo a schema1:OntologyProduct ; rdfs:label "Relation Ontology in obo format" ; dcterms:description "The obo edition is less expressive than the OWL, and has imports merged in" ; schema1:url . kgr:ro.owl a schema1:OntologyProduct ; rdfs:label "Relation Ontology" ; dcterms:description "Canonical edition" ; schema1:url . kgr:ro.ro-base.owl a schema1:OntologyProduct ; rdfs:label "RO base ontology" ; dcterms:description "Axioms defined within RO and to be used in imports for other ontologies" ; schema1:url . kgr:ro.subsets.ro-eco.owl a schema1:OntologyProduct ; rdfs:label "Ecology subset" ; dcterms:description "Ecology subset" ; schema1:url . kgr:ro.subsets.ro-interaction.owl a schema1:OntologyProduct ; rdfs:label "Interaction relations" ; dcterms:description "For use in ecology and environmental science" ; schema1:url . kgr:ro.subsets.ro-neuro.owl a schema1:OntologyProduct ; rdfs:label "Neuroscience subset" ; dcterms:description "For use in neuroscience" ; schema1:url . kgr:robokop.graph a schema1:Product ; rdfs:label "ROBOKOP Knowledge Graph (KG)" ; dcterms:description "A biomedical knowledge graph containing ~10 million nodes and ~250 million edges from ~30 biological data sources and bio-ontologies." ; schema1:url . kgr:rs.obo a schema1:OntologyProduct ; rdfs:label "rs.obo" ; dcterms:description "Rat Strain Ontology in OBO format" ; schema1:url . kgr:rs.owl a schema1:OntologyProduct ; rdfs:label "rs.owl" ; dcterms:description "Rat Strain Ontology in OWL format" ; schema1:url . kgr:rtx-kg2.code a schema1:ProcessProduct ; rdfs:label "Code for building RTX-KG2" ; dcterms:description "Code for building RTX-KG2, in Python" ; schema1:url . kgr:ruralkg.sparql a schema1:ProgrammingInterface ; rdfs:label "Rural Resilience KG SPARQL" ; dcterms:description "SPARQL endpoint for Rural Resilience KG" ; schema1:url . kgr:rxno.owl a schema1:OntologyProduct ; rdfs:label "Name Reaction Ontology" ; dcterms:description "Name Reaction Ontology" ; schema1:url . kgr:rxnorm.api a schema1:ProgrammingInterface ; rdfs:label "RxNorm API" ; dcterms:description "RESTful web services providing programmatic access to RxNorm drug terminology data including drug names, identifiers, relationships, and properties" ; schema1:url . kgr:rxnorm.data_files a schema1:Product ; rdfs:label "RxNorm Data Files" ; dcterms:description "Monthly releases of RxNorm data files in multiple formats including RRF files for the full vocabulary and relationships" ; schema1:url . kgr:rxnorm.rxclass a schema1:GraphicalInterface ; rdfs:label "RxClass" ; dcterms:description "Tool for exploring drug class hierarchies and finding RxNorm drug members associated with each class from multiple classification systems" ; schema1:url . kgr:rxnorm.rxmix a schema1:ProgrammingInterface ; rdfs:label "RxMix" ; dcterms:description "Interactive tool allowing users to combine multiple API functions to build custom drug information applications" ; schema1:url . kgr:rxnorm.rxnav a schema1:GraphicalInterface ; rdfs:label "RxNav Browser" ; dcterms:description "Interactive web browser for searching and exploring RxNorm drug concepts, relationships, and properties with multiple viewing options" ; schema1:url . kgr:rxnorm.rxnav_in_a_box a schema1:Product ; rdfs:label "RxNav-in-a-Box" ; dcterms:description "Locally installable package containing RxNav, RxClass, RxMix tools and RESTful APIs for offline use" ; schema1:url . kgr:saezlab a "Organization" ; rdfs:label "Saez-Rodriguez Lab" . kgr:sawgraph.sparql a schema1:ProgrammingInterface ; rdfs:label "SAWGraph PFAS SPARQL" ; dcterms:description "SPARQL endpoint for SAWGraph PFAS graph" ; schema1:url . kgr:sbo.owl a schema1:OntologyProduct ; rdfs:label "sbo.owl" ; dcterms:description "Systems Biology Ontology in OWL format" ; schema1:url . kgr:scales.sparql a schema1:ProgrammingInterface ; rdfs:label "SCALES SPARQL" ; dcterms:description "SPARQL endpoint for SCALES" ; schema1:url . kgr:scdo.obo a schema1:OntologyProduct ; rdfs:label "scdo.obo" ; dcterms:description "Sickle Cell Disease Ontology in OBO format" ; schema1:url . kgr:scdo.owl a schema1:OntologyProduct ; rdfs:label "scdo.owl" ; dcterms:description "Sickle Cell Disease Ontology in OWL format" ; schema1:url . kgr:sckan.apinatomy a schema1:Product ; rdfs:label "SCKAN ApiNATOMY Models" ; dcterms:description "Detailed ApiNATOMY models of neural circuits for organs including bladder, heart, colon, stomach, spleen, pancreas, and airways. Models are available in open-physiology repositories." ; schema1:url . kgr:sckan.data_release a schema1:Product ; rdfs:label "SCKAN Data Release" ; dcterms:description "Latest SCKAN data release, including curated knowledge and models, available via Zenodo." ; schema1:url . kgr:sckan.docs a schema1:DocumentationProduct ; rdfs:label "SCKAN Documentation and Tutorials" ; dcterms:description "Documentation, setup instructions, tutorials, and example queries for using and exploring SCKAN." ; schema1:url . kgr:sckan.query_interface a schema1:GraphicalInterface ; rdfs:label "SCKAN Query Interface (Docker)" ; dcterms:description "Interactive computational notebook (Org mode) for querying SCKAN via SPARQL and Cypher, supporting parameterized queries, code blocks, and graphical results. Distributed as a Docker image." ; schema1:url . kgr:securechainkg.sparql a schema1:ProgrammingInterface ; rdfs:label "SecureChain KG SPARQL" ; dcterms:description "SPARQL endpoint for SecureChain KG" ; schema1:url . kgr:semmeddb.semrep.tool a schema1:ProcessProduct ; rdfs:label "SemRep NLP System" ; dcterms:description "The SemRep natural language processing system that extracts semantic predications from biomedical literature to create SemMedDB" ; schema1:url . kgr:semopenalex.sparql a schema1:ProgrammingInterface ; rdfs:label "SemOpenAlex SPARQL" ; dcterms:description "SPARQL endpoint for SemOpenAlex" ; schema1:url . kgr:sennet.api a schema1:ProgrammingInterface ; rdfs:label "SenNet API" ; dcterms:description "API for programmatic access to SenNet data" ; schema1:url . kgr:sennet.data a schema1:Product ; rdfs:label "SenNet Multi-Omics Data" ; dcterms:description "Multi-omics datasets of senescent cells" ; schema1:url . kgr:sennet.portal a schema1:GraphicalInterface ; rdfs:label "SenNet Data Portal" ; dcterms:description "Data portal for browsing and accessing SenNet datasets" ; schema1:url . kgr:sep.owl a schema1:OntologyProduct ; rdfs:label "sep.owl" ; dcterms:description "Sample processing and separation techniques in OWL format" ; schema1:url . kgr:sepio.owl a schema1:OntologyProduct ; rdfs:label "SEPIO" ; dcterms:description "SEPIO" ; schema1:url . kgr:sequence-ontology a "Organization" ; rdfs:label "Sequence Ontology Consortium" . kgr:service-kp.code a schema1:ProcessProduct ; rdfs:label "Service KP Source Code" ; dcterms:description "BioThings API stack source repository used by the Service Provider team." ; schema1:url . kgr:service-kp.docs a schema1:DocumentationProduct ; rdfs:label "Service KP Documentation" ; dcterms:description "Team documentation for the Translator Service Provider." ; schema1:url . kgr:service-kp.portal a schema1:GraphicalInterface ; rdfs:label "Service KP SmartAPI Portal" ; dcterms:description "SmartAPI Translator portal for browsing registered Translator APIs." ; schema1:url . kgr:sibils.api.rest.fetch a schema1:ProgrammingInterface ; rdfs:label "SIBiLS Fetch API" ; dcterms:description "RESTful API for fetching annotated contents from SIBiLS collections" ; schema1:url . kgr:sibils.api.rest.qa a schema1:ProgrammingInterface ; rdfs:label "SIBiLS Question Answering API" ; dcterms:description "RESTful API for question answering using natural language in SIBiLS collections" ; schema1:url . kgr:sibils.api.rest.search a schema1:ProgrammingInterface ; rdfs:label "SIBiLS Search API" ; dcterms:description "RESTful API for customizable search in SIBiLS collections" ; schema1:url . kgr:sibils.api.sparql a schema1:ProgrammingInterface ; rdfs:label "SIBiLS SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying SIBiLS data" ; schema1:url . kgr:sibils.site a schema1:GraphicalInterface ; rdfs:label "SIBiLS Web Interface" ; dcterms:description "Web interface for exploring SIBiLS data" ; schema1:url . kgr:sibo.obo a schema1:OntologyProduct ; rdfs:label "sibo.obo" ; dcterms:description "Social Insect Behavior Ontology in OBO format" ; schema1:url . kgr:sibo.owl a schema1:OntologyProduct ; rdfs:label "sibo.owl" ; dcterms:description "Social Insect Behavior Ontology in OWL format" ; schema1:url . kgr:sider.drug_atc a schema1:MappingProduct ; rdfs:label "SIDER Drug ATC Codes" ; dcterms:description "Tab-separated file mapping drugs to their ATC codes." ; schema1:url . kgr:sider.drug_names a schema1:Product ; rdfs:label "SIDER Drug Names" ; dcterms:description "Tab-separated file mapping drugs to their names and synonyms." ; schema1:url . kgr:sider.meddra a schema1:Product ; rdfs:label "SIDER MedDRA Dictionary" ; dcterms:description "Tab-separated file mapping MedDRA terms to their concept ID." ; schema1:url . kgr:sider.meddra_all_indications a schema1:Product ; rdfs:label "SIDER MedDRA All Indications" ; dcterms:description "Tab-separated file containing all drug indications extracted from drug labels using MedDRA terminology." ; schema1:url . kgr:sider.meddra_all_label_indications a schema1:Product ; rdfs:label "SIDER MedDRA All Label Indications" ; dcterms:description "Tab-separated file containing all original label indications extracted from drug labels using MedDRA terminology." ; schema1:url . kgr:sider.meddra_all_label_se a schema1:Product ; rdfs:label "SIDER MedDRA All Label Side Effects" ; dcterms:description "Tab-separated file containing all original label side effects extracted from drug labels using MedDRA terminology." ; schema1:url . kgr:sider.meddra_all_se a schema1:Product ; rdfs:label "SIDER MedDRA All Side Effects" ; dcterms:description "Tab-separated file containing all side effects extracted from drug labels using MedDRA terminology." ; schema1:url . kgr:sider.meddra_freq a schema1:Product ; rdfs:label "SIDER MedDRA Frequency" ; dcterms:description "Tab-separated file containing side effect frequency information extracted from drug labels using MedDRA terminology." ; schema1:url . kgr:sider.web a schema1:GraphicalInterface ; rdfs:label "SIDER Web Interface" ; dcterms:description "Web interface that allows searching and browsing drugs and their side effects." ; schema1:url . kgr:signor.api a schema1:ProgrammingInterface ; rdfs:label "SIGNOR REST API" ; dcterms:description "REST-style endpoints for retrieving interaction, pathway, complex, and organism-specific datasets (tab-separated)" ; schema1:url . kgr:signor.complete a schema1:GraphProduct ; rdfs:label "SIGNOR Latest Stable Release" ; dcterms:description "Latest stable SIGNOR complete dataset (signed, directed causal interactions with effects, mechanisms, PMIDs, scores)" ; schema1:url . kgr:signor.interactions.dynamic a schema1:ProgrammingInterface ; rdfs:label "SIGNOR Interaction Query Endpoint" ; dcterms:description "Programmatic interaction data query returning tab-separated causal interaction records for specified entity IDs with configurable depth and type" ; schema1:url . kgr:signor.pathways a schema1:ProgrammingInterface ; rdfs:label "SIGNOR Pathway Data" ; dcterms:description "Pathway data (entities and relations) retrievable via parameterized REST calls supporting per-pathway or global views" ; schema1:url . kgr:signor.web a schema1:GraphicalInterface ; rdfs:label "SIGNOR Website" ; dcterms:description "Web interface for browsing entities, pathways, and visualizing causal signaling graphs" ; schema1:url . kgr:silva.aligner a schema1:ProcessProduct ; rdfs:label "SILVA Alignment, Classification and Tree Service (ACT)" ; dcterms:description "SILVA Incremental Aligner (SINA) for accurate alignment of ribosomal RNA sequences against curated reference alignments" ; schema1:url . kgr:silva.arb_files a schema1:Product ; rdfs:label "SILVA ARB Files" ; dcterms:description "ARB-formatted database files for phylogenetic analysis and sequence management in the ARB software environment" ; schema1:url . kgr:silva.browser a schema1:GraphicalInterface ; rdfs:label "SILVA Browser" ; dcterms:description "Interactive browser for exploring SILVA taxonomic hierarchy and sequence data with phylogenetic context" ; schema1:url . kgr:silva.ngs_pipeline a schema1:ProcessProduct ; rdfs:label "SILVAngs" ; dcterms:description "SILVAngs pipeline for high-throughput analysis of ribosomal RNA gene amplicons from next-generation sequencing data" ; schema1:url . kgr:silva.release_files a schema1:Product ; rdfs:label "SILVA Release Files" ; dcterms:description "Comprehensive release files including FASTA sequences, alignments, taxonomies, and ARB database files for SSU and LSU rRNA" ; schema1:url . kgr:silva.search a schema1:GraphicalInterface ; rdfs:label "SILVA Search" ; dcterms:description "Web-based search interface for SILVA ribosomal RNA sequences with advanced filtering and taxonomic browsing capabilities" ; schema1:url . kgr:silva.testprime a schema1:ProcessProduct ; rdfs:label "SILVA TestPrime" ; dcterms:description "TestPrime tool for in silico evaluation of PCR primer coverage and specificity against SILVA sequences" ; schema1:url . kgr:silva.testprobe a schema1:ProcessProduct ; rdfs:label "SILVA TestProbe" ; dcterms:description "TestProbe tool for in silico evaluation of hybridization probe coverage and specificity against SILVA sequences" ; schema1:url . kgr:skm.ckn.explorer a schema1:GraphicalInterface ; rdfs:label "CKN Explorer" ; dcterms:description "Interactive search and visualization tool for the Comprehensive Knowledge Network" ; schema1:url . kgr:skm.ckn.v1.annotations a schema1:GraphProduct ; rdfs:label "CKN v1 (June 2018), node annotations" ; dcterms:description "Comprehensive Knowledge Network v1 in SIF/LGL format. This file contains the node annotations." ; schema1:url . kgr:skm.ckn.v1.graph a schema1:GraphProduct ; rdfs:label "CKN v1 (June 2018)" ; dcterms:description "Comprehensive Knowledge Network v1 in SIF/LGL format" ; schema1:url . kgr:skm.ckn.v2.annotations a schema1:GraphProduct ; rdfs:label "CKN v2 (June 2023), node annotations" ; dcterms:description "Comprehensive Knowledge Network v2 in SIF/LGL format with 26,234 entities and ~500,000 interactions. This file contains the node annotations." ; schema1:url . kgr:skm.ckn.v2.graph a schema1:GraphProduct ; rdfs:label "CKN v2 (June 2023)" ; dcterms:description "Comprehensive Knowledge Network v2 in SIF/LGL format with 26,234 entities and ~500,000 interactions" ; schema1:url . kgr:skm.pss.explorer a schema1:GraphicalInterface ; rdfs:label "PSS Explorer" ; dcterms:description "Interactive search and visualization tool for the mechanistic Plant Stress Signalling model" ; schema1:url . kgr:skm.pss.live.boolnet.annotations a schema1:GraphProduct ; rdfs:label "PSS Live Downloads (BoolNet), node annotations" ; dcterms:description "Current PSS model in Boolean network format compatible with BoolDog and BoolNet. This file contains the node annotations." ; schema1:url . kgr:skm.pss.live.boolnet.graph a schema1:GraphProduct ; rdfs:label "PSS Live Downloads (BoolNet)" ; dcterms:description "Current PSS model in Boolean network format compatible with BoolDog and BoolNet" ; schema1:url . kgr:skm.pss.live.dot a schema1:GraphProduct ; rdfs:label "PSS Live Download (DOT)" ; dcterms:description "Current PSS model in DOT Language format compatible with Graphviz" ; schema1:url . kgr:skm.pss.live.sbgn a schema1:GraphProduct ; rdfs:label "PSS Live Download (SBGN-ML)" ; dcterms:description "Current PSS model in Systems Biology Graphical Notation XML format" ; schema1:url . kgr:skm.pss.live.sbml a schema1:GraphProduct ; rdfs:label "PSS Live Download (SBML)" ; dcterms:description "Current PSS model in Systems Biology Markup Language XML format" ; schema1:url . kgr:skm.pss.live.sif.dinar.graph a schema1:GraphProduct ; rdfs:label "PSS Live Download, DiNAR (SIF/LGL)" ; dcterms:description "Current PSS model in Simple Interaction Format compatible with Cytoscape. Reactions are collapsed to edges, FunctionalClusters are expanded to arabidopsis identifiers." ; schema1:url . kgr:skm.pss.live.sif.original.annotations a schema1:GraphProduct ; rdfs:label "PSS Live Download, original (SIF/LGL), node annotations" ; dcterms:description "Current PSS model in Simple Interaction Format compatible with Cytoscape. Reactions are represented as nodes (as in PSS Explorer and database schema). This file contains the node annotations." ; schema1:url . kgr:skm.pss.live.sif.original.graph a schema1:GraphProduct ; rdfs:label "PSS Live Download, original (SIF/LGL)" ; dcterms:description "Current PSS model in Simple Interaction Format compatible with Cytoscape. Reactions are represented as nodes (as in PSS Explorer and database schema)." ; schema1:url . kgr:skm.pss.live.sif.projection.annotations a schema1:GraphProduct ; rdfs:label "PSS Live Download, projection (SIF/LGL), node annotations" ; dcterms:description "Current PSS model in Simple Interaction Format compatible with Cytoscape. Reactions are collapsed to edges. This file contains the node annotations." ; schema1:url . kgr:skm.pss.live.sif.projection.graph a schema1:GraphProduct ; rdfs:label "PSS Live Download, projection (SIF/LGL)" ; dcterms:description "Current PSS model in Simple Interaction Format compatible with Cytoscape. Reactions are collapsed to edges." ; schema1:url . kgr:skos.core a schema1:DataModelProduct ; rdfs:label "SKOS Core" ; dcterms:description "SKOS Core Vocabulary Specification" ; schema1:url . kgr:skos.rdf a schema1:DataModelProduct ; rdfs:label "SKOS RDF/XML" ; dcterms:description "SKOS Namespace Document - RDF/XML Variant" ; schema1:url . kgr:skos.reference a schema1:DocumentationProduct ; rdfs:label "SKOS Reference" ; dcterms:description "SKOS Simple Knowledge Organization System Reference" ; schema1:url . kgr:sldb.code a schema1:ProcessProduct ; rdfs:label "SLDB Source Repository" ; dcterms:description "Source code for building the synthetic lethal interaction graph." ; schema1:url . kgr:sldb.docs a schema1:DocumentationProduct ; rdfs:label "SLDB Documentation" ; dcterms:description "Project README and documentation for SLDB graph generation and usage." ; schema1:url . kgr:sldb.releases a schema1:Product ; rdfs:label "SLDB Releases" ; dcterms:description "Release artifacts for SLDB graph builds." ; schema1:url . kgr:slso-base.owl a schema1:OntologyProduct ; rdfs:label "slso-base.owl" ; dcterms:description "Includes axioms linking to other ontologies, but no imports of those ontologies" ; schema1:url . kgr:slso.json a schema1:OntologyProduct ; rdfs:label "slso.json" ; dcterms:description "Space Life Sciences Ontology in JSON format" ; schema1:url . kgr:slso.obo a schema1:OntologyProduct ; rdfs:label "slso.obo" ; dcterms:description "Space Life Sciences Ontology in OBO format" ; schema1:url . kgr:slso.owl a schema1:OntologyProduct ; rdfs:label "slso.owl" ; dcterms:description "Space Life Sciences Ontology in OWL format" ; schema1:url . kgr:smart.list-genomes a schema1:GraphicalInterface ; rdfs:label "SMART Genome List" ; dcterms:description "Genomic SMART genome listing interface." ; schema1:url . kgr:smart.portal a schema1:GraphicalInterface ; rdfs:label "SMART Portal" ; dcterms:description "Main SMART portal for protein domain annotation and architecture analysis." ; schema1:url . kgr:smart.search a schema1:GraphicalInterface ; rdfs:label "SMART Search" ; dcterms:description "SMART search interface for querying proteins and domain annotations." ; schema1:url . kgr:smithsonian-nmnh a "Organization" ; rdfs:label "Smithsonian Institution's National Museum of Natural History" . kgr:snodb.about a schema1:DocumentationProduct ; rdfs:label "About and Help Documentation" ; dcterms:description "Comprehensive documentation about data sources, methods, and curation processes" ; schema1:url . kgr:snodb.abundance a schema1:Product ; rdfs:label "Abundance Data" ; dcterms:description "snoRNA and host gene abundance data from TGIRT-Seq across tissues and cancer cell lines" ; schema1:url . kgr:snodb.abundance-viewer a schema1:GraphicalInterface ; rdfs:label "Abundance Viewer" ; dcterms:description "Interactive abundance viewer for visualizing snoRNA expression across tissues and cell lines" ; schema1:url . kgr:snodb.canonical-interactions a schema1:Product ; rdfs:label "Canonical snoRNA-RNA Interactions" ; dcterms:description "Canonical snoRNA-rRNA and snoRNA-snRNA interactions from multiple sources" ; schema1:url . kgr:snodb.conservation a schema1:Product ; rdfs:label "Conservation Data" ; dcterms:description "Conservation data including PhastCons scores for 100 vertebrates from UCSC genome browser" ; schema1:url . kgr:snodb.copies a schema1:Product ; rdfs:label "snoRNA Copy Data" ; dcterms:description "snoRNA copy information based on RFAM classification" ; schema1:url . kgr:snodb.experiment-details a schema1:DocumentationProduct ; rdfs:label "Experiment Details" ; dcterms:description "Detailed information about TGIRT-Seq data processing and experimental methods" ; schema1:url . kgr:snodb.export a schema1:Product ; rdfs:label "Data Export" ; dcterms:description "Exportable data tables with advanced search and filtering capabilities" ; schema1:url . kgr:snodb.host-genes a schema1:Product ; rdfs:label "Host Gene Data" ; dcterms:description "Host gene information with functional annotations from Gene Ontology" ; schema1:url . kgr:snodb.motifs a schema1:Product ; rdfs:label "Motif and Guide Region Data" ; dcterms:description "snoRNA motif sequences and guide regions (boxes C, D, C', D' for C/D box snoRNAs; H and ACA boxes for H/ACA snoRNAs)" ; schema1:url . kgr:snodb.noncanonical-interactions a schema1:Product ; rdfs:label "Non-canonical snoRNA-RNA Interactions" ; dcterms:description "Non-canonical snoRNA-RNA interactions from RISE database" ; schema1:url . kgr:snodb.portal a schema1:GraphicalInterface ; rdfs:label "snoDB 2.0 Portal" ; dcterms:description "Web portal for searching, browsing, and analyzing human snoRNA data with interactive tables and visualization tools" ; schema1:url . kgr:snodb.protein-interactions a schema1:Product ; rdfs:label "snoRNA-Protein Interactions" ; dcterms:description "snoRNA-protein interactions from ENCODE eCLIP data of 150 RNA binding proteins" ; schema1:url . kgr:snodb.rrna-modifications a schema1:GraphicalInterface ; rdfs:label "rRNA Chemical Modifications Browser" ; dcterms:description "Browser for exploring rRNA chemical modification sites and their guide snoRNAs" ; schema1:url . kgr:snodb.rrna-mods a schema1:Product ; rdfs:label "rRNA Modification Data" ; dcterms:description "rRNA modification positions with validation status and modification levels from multiple studies" ; schema1:url . kgr:snodb.sequence-search a schema1:GraphicalInterface ; rdfs:label "Sequence Search Tool" ; dcterms:description "Sequence similarity search tool for finding snoRNAs by sequence" ; schema1:url . kgr:snodb.sequences a schema1:Product ; rdfs:label "snoRNA Sequences" ; dcterms:description "Database of human snoRNA sequences with GRCh38 genomic coordinates" ; schema1:url . kgr:snodb.snorupdate a schema1:ProcessProduct ; rdfs:label "snoRupdate" ; dcterms:description "Tool for integrating snoDB snoRNAs into Ensembl or RefSeq GTF annotation files" ; schema1:url . kgr:snodb.statistics a schema1:GraphicalInterface ; rdfs:label "Statistics Dashboard" ; dcterms:description "Statistics dashboard showing snoRNA type distributions, length distributions, and target biotypes" ; schema1:url . kgr:snodb.tutorial a schema1:DocumentationProduct ; rdfs:label "Tutorial" ; dcterms:description "Interactive tutorial for navigating and using snoDB features" ; schema1:url . kgr:snomedct.browser a schema1:GraphicalInterface ; rdfs:label "SNOMED CT Browser" ; dcterms:description "The SNOMED International browser for exploring the SNOMED CT terminology." ; schema1:url . kgr:snomedct.international.content a schema1:OntologyProduct ; rdfs:label "SNOMED CT International Edition" ; dcterms:description "The monthly release of the International Edition of SNOMED CT, the core release from SNOMED International, as RF2 files." ; schema1:url . kgr:snomedct.nursing a schema1:OntologyProduct ; rdfs:label "SNOMED CT Nursing Problem List Subset" ; dcterms:description "A frequently used subset of SNOMED CT concepts for nursing documentation in electronic health records. August 2017 release." ; schema1:url . kgr:snomedct.us.content a schema1:OntologyProduct ; rdfs:label "SNOMED CT US Edition" ; dcterms:description "The biannual release of the US Edition of SNOMED CT, combining content from both the US Extension and International releases." ; schema1:url . kgr:snopy.about a schema1:DocumentationProduct ; rdfs:label "About snOPY" ; dcterms:description "About page with database description, methods, and citation information" ; schema1:url . kgr:snopy.blast a schema1:ProgrammingInterface ; rdfs:label "BLAST Interface" ; dcterms:description "BLAST interface for sequence similarity searches against snoRNA sequences" ; schema1:url . kgr:snopy.box-cd-snornas a schema1:Product ; rdfs:label "Box C/D snoRNAs" ; dcterms:description "Curated snoRNA sequences for box C/D class guiding 2'-O-methylation" ; schema1:url . kgr:snopy.box-haca-snornas a schema1:Product ; rdfs:label "Box H/ACA snoRNAs" ; dcterms:description "Curated snoRNA sequences for box H/ACA class guiding pseudouridylation" ; schema1:url . kgr:snopy.intronic-loci a schema1:Product ; rdfs:label "Intronic snoRNA Loci" ; dcterms:description "Information about intronic snoRNA gene loci within protein-coding host genes" ; schema1:url . kgr:snopy.monocistronic-loci a schema1:Product ; rdfs:label "Monocistronic snoRNA Loci" ; dcterms:description "Information about monocistronic snoRNA gene loci with single genes" ; schema1:url . kgr:snopy.ortholog-data a schema1:Product ; rdfs:label "snoRNA Ortholog Data" ; dcterms:description "Orthologous snoRNA relationships identified through target RNA conservation" ; schema1:url . kgr:snopy.orthologs a schema1:GraphicalInterface ; rdfs:label "Ortholog Browser" ; dcterms:description "Ortholog browser for exploring snoRNA orthologous relationships across species" ; schema1:url . kgr:snopy.polycistronic-loci a schema1:Product ; rdfs:label "Polycistronic snoRNA Loci" ; dcterms:description "Information about polycistronic snoRNA gene clusters with multiple genes" ; schema1:url . kgr:snopy.portal a schema1:GraphicalInterface ; rdfs:label "snOPY Portal" ; dcterms:description "Web portal for browsing and searching snoRNA orthological gene information" ; schema1:url . kgr:snopy.rrna-modifications a schema1:Product ; rdfs:label "rRNA Modification Sites" ; dcterms:description "Mapped modification sites on rRNA targets" ; schema1:url . kgr:snopy.search a schema1:GraphicalInterface ; rdfs:label "Search Interface" ; dcterms:description "Search interface for querying snoRNAs by species, box type, target RNA, organization, keywords, and curation status" ; schema1:url . kgr:snopy.snrna-modifications a schema1:Product ; rdfs:label "snRNA Modification Sites" ; dcterms:description "Mapped modification sites on snRNA targets" ; schema1:url . kgr:snopy.statistics a schema1:DocumentationProduct ; rdfs:label "Statistics" ; dcterms:description "Database statistics showing organism coverage and entry counts" ; schema1:url . kgr:snopy.target-rna a schema1:GraphicalInterface ; rdfs:label "Target RNA Viewer" ; dcterms:description "Target RNA viewer for exploring modification sites on rRNA and snRNA targets" ; schema1:url . kgr:snornadatabase.blast a schema1:ProgrammingInterface ; rdfs:label "snoRNABase BLAST" ; dcterms:description "BLAST search interface for sequence similarity searches against human sno/scaRNAs" ; schema1:url . kgr:snornadatabase.browse a schema1:GraphicalInterface ; rdfs:label "snoRNABase Browse" ; dcterms:description "Browse function for viewing and downloading snoRNA sequences in FASTA format" ; schema1:url . kgr:snornadatabase.find_guide a schema1:GraphicalInterface ; rdfs:label "snoRNABase Find Guide RNA" ; dcterms:description "Tool for finding snoRNAs that guide modification of specific nucleotides in rRNAs and spliceosomal RNAs" ; schema1:url . kgr:snornadatabase.portal a schema1:GraphicalInterface ; rdfs:label "snoRNABase Web Portal" ; dcterms:description "Web portal for searching and browsing human snoRNA and scaRNA sequences, targets, and modifications" ; schema1:url . kgr:snornadatabase.search a schema1:GraphicalInterface ; rdfs:label "snoRNABase Search" ; dcterms:description "Search engine for finding snoRNAs by name, length, GenBank accession, or target RNA" ; schema1:url . kgr:snpeff.databases a schema1:Product ; rdfs:label "SnpEff Genome Databases" ; dcterms:description "Over 38,000 pre-built genome databases available for automatic download and annotation" ; schema1:url . kgr:snpeff.documentation a schema1:GraphicalInterface ; rdfs:label "SnpEff Documentation" ; dcterms:description "Comprehensive documentation website for SnpEff with usage examples, tutorials, and command references" ; schema1:url . kgr:snpeff.download a schema1:ProgrammingInterface ; rdfs:label "SnpEff Download Package" ; dcterms:description "SnpEff core package with command-line interface for variant annotation and effect prediction" ; schema1:url . kgr:snpeff.github a schema1:ProgrammingInterface ; rdfs:label "SnpEff GitHub Repository" ; dcterms:description "SnpEff source code repository on GitHub" ; schema1:url . kgr:snpeff.sourceforge a schema1:Product ; rdfs:label "SnpEff SourceForge Archive" ; dcterms:description "Historical releases and versions of SnpEff available on SourceForge" ; schema1:url . kgr:snpsift.documentation a schema1:GraphicalInterface ; rdfs:label "SnpSift Documentation" ; dcterms:description "SnpSift documentation covering tools for filtering, annotating, and manipulating VCF files" ; schema1:url . kgr:so.obo a schema1:OntologyProduct ; rdfs:label "Main SO release in OBO Format" ; dcterms:description "Main SO release in OBO Format" ; schema1:url . kgr:so.owl a schema1:OntologyProduct ; rdfs:label "Main SO OWL release" ; dcterms:description "Main SO OWL release" ; schema1:url . kgr:so.subsets.SOFA.obo a schema1:OntologyProduct ; rdfs:label "Sequence Ontology Feature Annotation (SOFA) subset (OBO Format)" ; dcterms:description "This subset includes only locatable sequence features and is designed for use in such outputs as GFF3" ; schema1:url . kgr:so.subsets.SOFA.owl a schema1:OntologyProduct ; rdfs:label "Sequence Ontology Feature Annotation (SOFA) subset (OWL)" ; dcterms:description "This subset includes only locatable sequence features and is designed for use in such outputs as GFF3" ; schema1:url . kgr:sockg.sparql a schema1:ProgrammingInterface ; rdfs:label "SOC-KG SPARQL" ; dcterms:description "SPARQL endpoint for SOC-KG" ; schema1:url . kgr:spar a "Organization" ; rdfs:label "SPAR (Semantic Publishing and Referencing) Ontologies" . kgr:spatialkg.sparql a schema1:ProgrammingInterface ; rdfs:label "SAWGraph Spatial KG SPARQL" ; dcterms:description "SPARQL endpoint for SAWGraph Spatial KG" ; schema1:url . kgr:spd.owl a schema1:OntologyProduct ; rdfs:label "spd.owl" ; dcterms:description "Spider Ontology in OWL format" ; schema1:url . kgr:spoke-genelab.sparql a schema1:ProgrammingInterface ; rdfs:label "SPOKE GeneLab SPARQL" ; dcterms:description "SPARQL endpoint for SPOKE GeneLab" ; schema1:url . kgr:spoke.neighborhood_explorer a schema1:GraphicalInterface ; rdfs:label "SPOKE Neighborhood Explorer" ; dcterms:description "Web interface that allows searching SPOKE for a node of interest and viewing its immediate connectivity neighborhood." ; schema1:url . kgr:spoke.sparql a schema1:ProgrammingInterface ; rdfs:label "SPOKE SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying SPOKE knowledge graph via the OKN FRINK service" ; schema1:url . kgr:sri-reference-kg.graph a schema1:GraphProduct ; rdfs:label "SRI-Reference KG (KGX distribution)" ; dcterms:description "KGX distribution of the SRI-Reference KG" ; schema1:url . kgr:srpdb.2d-structures a schema1:Product ; rdfs:label "SRP RNA 2D Structures" ; dcterms:description "RNA secondary structure diagrams with base pairs proven by comparative sequence analysis" ; schema1:url . kgr:srpdb.3d-structures a schema1:Product ; rdfs:label "SRP 3D Structures" ; dcterms:description "Three-dimensional structural information for SRP components" ; schema1:url . kgr:srpdb.about a schema1:DocumentationProduct ; rdfs:label "About SRPDB" ; dcterms:description "Comprehensive information about SRPDB contents and usage" ; schema1:url . kgr:srpdb.animal-rna a schema1:Product ; rdfs:label "Animal SRP RNA Alignments" ; dcterms:description "Multiple sequence alignments of animal SRP RNAs (119 sequences)" ; schema1:url . kgr:srpdb.archaeal-rna a schema1:Product ; rdfs:label "Archaeal SRP RNA Alignments" ; dcterms:description "Multiple sequence alignments of archaeal SRP RNAs (81 sequences)" ; schema1:url . kgr:srpdb.bibliography a schema1:DocumentationProduct ; rdfs:label "Bibliography" ; dcterms:description "Bibliography of SRP-related publications" ; schema1:url . kgr:srpdb.cam-kinase a schema1:Product ; rdfs:label "CaM Kinase II Sequences" ; dcterms:description "Aligned and annotated sequences for CaM kinase II" ; schema1:url . kgr:srpdb.comparative-analysis a schema1:DocumentationProduct ; rdfs:label "Comparative Sequence Analysis Documentation" ; dcterms:description "Explanation of comparative sequence analysis methodology" ; schema1:url . kgr:srpdb.cpsrp43 a schema1:Product ; rdfs:label "cpSRP43 Protein Sequences" ; dcterms:description "Aligned and annotated sequences for cpSRP43 protein" ; schema1:url . kgr:srpdb.flhf a schema1:Product ; rdfs:label "Flhf Protein Sequences" ; dcterms:description "Aligned and annotated sequences for Flhf protein" ; schema1:url . kgr:srpdb.ftsy a schema1:Product ; rdfs:label "SRP Receptor Alpha (FtsY) Sequences" ; dcterms:description "Aligned and annotated sequences for SRP receptor alpha subunit (FtsY)" ; schema1:url . kgr:srpdb.fungal-metazoan-rna a schema1:Product ; rdfs:label "Fungal/Metazoan SRP RNA Alignments" ; dcterms:description "Multiple sequence alignments of fungal/metazoan-group SRP RNAs (80 sequences)" ; schema1:url . kgr:srpdb.links a schema1:DocumentationProduct ; rdfs:label "Useful Links" ; dcterms:description "External links to SRP-related resources" ; schema1:url . kgr:srpdb.long-bacterial-rna a schema1:Product ; rdfs:label "Long Bacterial SRP RNA Alignments" ; dcterms:description "Multiple sequence alignments of long bacterial (6S) SRP RNAs (96 sequences)" ; schema1:url . kgr:srpdb.models a schema1:GraphicalInterface ; rdfs:label "SRP Models" ; dcterms:description "Collection of SRP structural models" ; schema1:url . kgr:srpdb.more-protein-browser a schema1:GraphicalInterface ; rdfs:label "More Protein Browser" ; dcterms:description "Browser for additional proteins including SRP receptor subunits, Flhf, and CaM kinase II" ; schema1:url . kgr:srpdb.motifs a schema1:Product ; rdfs:label "SRP RNA Motifs" ; dcterms:description "Conserved sequence motifs in SRP RNAs" ; schema1:url . kgr:srpdb.overview a schema1:DocumentationProduct ; rdfs:label "SRP Overview" ; dcterms:description "Overview of signal recognition particle structure and function" ; schema1:url . kgr:srpdb.plant-rna a schema1:Product ; rdfs:label "Plant SRP RNA Alignments" ; dcterms:description "Multiple sequence alignments of plant SRP RNAs (114 sequences)" ; schema1:url . kgr:srpdb.portal a schema1:GraphicalInterface ; rdfs:label "SRPDB Portal" ; dcterms:description "Web portal for browsing SRP RNA and protein sequences with phylogenetic organization" ; schema1:url . kgr:srpdb.protozoan-rna a schema1:Product ; rdfs:label "Protozoan SRP RNA Alignments" ; dcterms:description "Multiple sequence alignments of protozoan SRP RNAs (82 sequences)" ; schema1:url . kgr:srpdb.receptor-beta a schema1:Product ; rdfs:label "SRP Receptor Beta Sequences" ; dcterms:description "Aligned and annotated sequences for SRP receptor beta subunit" ; schema1:url . kgr:srpdb.short-bacterial-rna a schema1:Product ; rdfs:label "Short Bacterial SRP RNA Alignments" ; dcterms:description "Multiple sequence alignments of short bacterial (4.5S) SRP RNAs (537 sequences)" ; schema1:url . kgr:srpdb.srp-protein-browser a schema1:GraphicalInterface ; rdfs:label "SRP Protein Browser" ; dcterms:description "Browser for SRP protein sequences including SRP9, SRP14, SRP19, SRP21, SRP54, SRP68, SRP72, and cpSRP43" ; schema1:url . kgr:srpdb.srp-rna-browser a schema1:GraphicalInterface ; rdfs:label "SRP RNA Browser" ; dcterms:description "Browser for SRP RNA sequences organized phylogenetically and alphabetically" ; schema1:url . kgr:srpdb.srp14 a schema1:Product ; rdfs:label "SRP14 Protein Sequences" ; dcterms:description "Aligned and annotated sequences for SRP14 protein" ; schema1:url . kgr:srpdb.srp19 a schema1:Product ; rdfs:label "SRP19 Protein Sequences" ; dcterms:description "Aligned and annotated sequences for SRP19 protein" ; schema1:url . kgr:srpdb.srp21 a schema1:Product ; rdfs:label "SRP21 Protein Sequences" ; dcterms:description "Aligned and annotated sequences for SRP21 protein" ; schema1:url . kgr:srpdb.srp54 a schema1:Product ; rdfs:label "SRP54 Protein Sequences" ; dcterms:description "Aligned and annotated sequences for SRP54 protein" ; schema1:url . kgr:srpdb.srp68 a schema1:Product ; rdfs:label "SRP68 Protein Sequences" ; dcterms:description "Aligned and annotated sequences for SRP68 protein" ; schema1:url . kgr:srpdb.srp72 a schema1:Product ; rdfs:label "SRP72 Protein Sequences" ; dcterms:description "Aligned and annotated sequences for SRP72 protein" ; schema1:url . kgr:srpdb.srp9 a schema1:Product ; rdfs:label "SRP9 Protein Sequences" ; dcterms:description "Aligned and annotated sequences for SRP9 protein" ; schema1:url . kgr:srpdb.structures a schema1:GraphicalInterface ; rdfs:label "SRP Structures" ; dcterms:description "Gallery of SRP structures from experimental determinations" ; schema1:url . kgr:stato.owl a schema1:OntologyProduct ; rdfs:label "stato.owl" ; dcterms:description "The Statistical Methods Ontology in OWL format" ; schema1:url . kgr:stellar.code a schema1:ProcessProduct ; rdfs:label "STELLAR Code" ; dcterms:description "PyTorch implementation of the STELLAR algorithm for cell-type discovery and identification" ; schema1:url . kgr:stellar.datasets a schema1:Product ; rdfs:label "STELLAR Datasets" ; dcterms:description "CODEX multiplexed imaging datasets used in STELLAR research" ; schema1:url . kgr:stellar.demo a schema1:GraphicalInterface ; rdfs:label "STELLAR Demo Notebook" ; dcterms:description "Demo Jupyter notebook showing example usage of STELLAR on downsampled datasets" ; schema1:url . kgr:stitch.api a schema1:ProgrammingInterface ; rdfs:label "STITCH API" ; dcterms:description "API for programmatic access to STITCH chemical-protein interaction data" ; schema1:url . kgr:stitch.downloads a schema1:Product ; rdfs:label "STITCH Data Downloads" ; dcterms:description "Downloadable data files containing chemical-protein interaction networks" ; schema1:url . kgr:stitch.portal a schema1:Product ; rdfs:label "STITCH Web Portal" ; dcterms:description "Web interface for searching and visualizing chemical-protein interactions across organisms" ; schema1:url . kgr:string.api a schema1:ProgrammingInterface ; rdfs:label "STRING REST API" ; dcterms:description "RESTful API for programmatic access to STRING data" ; schema1:url . kgr:string.clusters.info a schema1:Product ; rdfs:label "STRING Clusters Info" ; dcterms:description "hierarchical STRING clusters annotations" ; schema1:url . kgr:string.clusters.proteins a schema1:Product ; rdfs:label "STRING Clusters Proteins" ; dcterms:description "hierarchical STRING clusters and their proteins" ; schema1:url . kgr:string.clusters.tree a schema1:Product ; rdfs:label "STRING Clusters Tree" ; dcterms:description "hierarchical STRING clusters tree (represented as child-parent relationship)" ; schema1:url . kgr:string.cog.mappings a schema1:Product ; rdfs:label "STRING COG Mappings" ; dcterms:description "LCA orthologous groups (COGs,NOGs,KOGs,...) and their proteins" ; schema1:url . kgr:string.database.evidence a schema1:Product ; rdfs:label "STRING Database Evidence Schema" ; dcterms:description "full database, part III: interaction evidence (excluding license-restricted data)" ; schema1:url . kgr:string.database.items a schema1:Product ; rdfs:label "STRING Database Items Schema" ; dcterms:description "full database, part I: the players (proteins, species, COGs,...)" ; schema1:url . kgr:string.database.schema a schema1:DocumentationProduct ; rdfs:label "STRING Database Schema" ; dcterms:description "STRING database schema" ; schema1:url . kgr:string.protein.aliases a schema1:Product ; rdfs:label "STRING Protein Aliases" ; dcterms:description "aliases for STRING proteins: locus names, accessions, descriptions" ; schema1:url . kgr:string.protein.enrichment.terms a schema1:Product ; rdfs:label "STRING Protein Enrichment Terms" ; dcterms:description "list of terms associated with proteins used in the STRING enrichment" ; schema1:url . kgr:string.protein.homology a schema1:Product ; rdfs:label "STRING Protein Homology" ; dcterms:description "SW alignment scores between proteins within each STRING species" ; schema1:url . kgr:string.protein.info a schema1:Product ; rdfs:label "STRING Protein Info" ; dcterms:description "list of STRING proteins incl. their display names and descriptions" ; schema1:url . kgr:string.protein.network.embeddings a schema1:Product ; rdfs:label "STRING Protein Network Embeddings" ; dcterms:description "cross-species (aligned) eukaryotic protein network embeddings" ; schema1:url . kgr:string.protein.orthology a schema1:Product ; rdfs:label "STRING Protein Orthology" ; dcterms:description "hierarchical eggNOG orthologous groups and their proteins" ; schema1:url . kgr:string.protein.sequence.embeddings a schema1:Product ; rdfs:label "STRING Protein Sequence Embeddings" ; dcterms:description "ProtT5 eukaryotic protein sequence embeddings" ; schema1:url . kgr:string.protein.sequences a schema1:Product ; rdfs:label "STRING Protein Sequences" ; dcterms:description "sequences of the proteins in STRING (can be used as a BLAST db)" ; schema1:url . kgr:string.species a schema1:Product ; rdfs:label "STRING Species List" ; dcterms:description "organisms in STRING" ; schema1:url . kgr:string.species.tree a schema1:Product ; rdfs:label "STRING Species Tree" ; dcterms:description "STRING tree of species" ; schema1:url . kgr:string.web a schema1:GraphicalInterface ; rdfs:label "STRING Web Interface" ; dcterms:description "Web interface for searching, visualizing, and analyzing protein-protein interaction networks" ; schema1:url . kgr:stringdb a "Organization" ; rdfs:label "STRING/EMBL Team" . kgr:sudokn.sparql a schema1:ProgrammingInterface ; rdfs:label "SUDOKN SPARQL" ; dcterms:description "SPARQL endpoint for SUDOKN" ; schema1:url . kgr:suppkg.docs a schema1:DocumentationProduct ; rdfs:label "SuppKG Documentation" ; dcterms:description "Translator wiki page describing SuppKG scope and example supplement-disease relationships." ; schema1:url . kgr:suppkg.source-data a schema1:ProcessProduct ; rdfs:label "SuppKG Source Data Repository" ; dcterms:description "Source data directory used for SuppKG in the SemRep_DS repository." ; schema1:url . kgr:swisslipid.api a schema1:ProgrammingInterface ; rdfs:label "SwissLipids API" ; dcterms:description "Public API page for programmatic SwissLipids access." ; schema1:url . kgr:swisslipid.lipids a schema1:Product ; rdfs:label "SwissLipids Lipids" ; dcterms:description "Comprehensive TSV catalogue of SwissLipids lipid entities and identifiers." ; schema1:url . kgr:swisslipid.portal a schema1:GraphicalInterface ; rdfs:label "SwissLipids Portal" ; dcterms:description "Main SwissLipids interface for browsing lipid classes and analytes." ; schema1:url . kgr:swisslipid.tissues a schema1:Product ; rdfs:label "SwissLipids Tissues" ; dcterms:description "TSV export of lipid tissue and cell annotations with taxon and evidence tags." ; schema1:url . kgr:swissmodel.api a schema1:ProgrammingInterface ; rdfs:label "SWISS-MODEL API" ; dcterms:description "Programmatic API for submitting and retrieving SWISS-MODEL tasks and model data." ; schema1:url . kgr:swissmodel.portal a schema1:GraphicalInterface ; rdfs:label "SWISS-MODEL Portal" ; dcterms:description "Main interface for automated protein structure homology modeling." ; schema1:url . kgr:swissmodel.repository a schema1:GraphicalInterface ; rdfs:label "SWISS-MODEL Repository" ; dcterms:description "Search and download interface for the SWISS-MODEL Repository of annotated homology models." ; schema1:url . kgr:swo.json a schema1:OntologyProduct ; rdfs:label "swo.json" ; dcterms:description "Software ontology in JSON format" ; schema1:url . kgr:swo.owl a schema1:OntologyProduct ; rdfs:label "swo.owl" ; dcterms:description "Software ontology in OWL format" ; schema1:url . kgr:symp.obo a schema1:OntologyProduct ; rdfs:label "symp.obo" ; dcterms:description "Symptom Ontology in OBO format" ; schema1:url . kgr:symp.owl a schema1:OntologyProduct ; rdfs:label "symp.owl" ; dcterms:description "Symptom Ontology in OWL format" ; schema1:url . kgr:t4fs-community.json a schema1:OntologyProduct ; rdfs:label "This community view of T4FS makes the ontology available in JSON format without upper-level ontology (ULO) terms to give the user community a simpler view of the term hierarchy." ; dcterms:description "This community view of T4FS makes the ontology available in JSON format without upper-level ontology (ULO) terms to give the user community a simpler view of the term hierarchy." ; schema1:url . kgr:t4fs-community.obo a schema1:OntologyProduct ; rdfs:label "This community view of T4FS makes the ontology available in OBO format without upper-level ontology (ULO) terms to give the user community a simpler view of the term hierarchy." ; dcterms:description "This community view of T4FS makes the ontology available in OBO format without upper-level ontology (ULO) terms to give the user community a simpler view of the term hierarchy." ; schema1:url . kgr:t4fs-community.owl a schema1:OntologyProduct ; rdfs:label "This community view of T4FS makes the ontology available in OWL without upper-level ontology (ULO) terms to give the user community a simpler view of the term hierarchy." ; dcterms:description "This community view of T4FS makes the ontology available in OWL without upper-level ontology (ULO) terms to give the user community a simpler view of the term hierarchy." ; schema1:url . kgr:t4fs.json a schema1:OntologyProduct ; rdfs:label "t4fs.json" ; dcterms:description "terms4FAIRskills in JSON format" ; schema1:url . kgr:t4fs.obo a schema1:OntologyProduct ; rdfs:label "t4fs.obo" ; dcterms:description "terms4FAIRskills in OBO format" ; schema1:url . kgr:t4fs.owl a schema1:OntologyProduct ; rdfs:label "t4fs.owl" ; dcterms:description "terms4FAIRskills in OWL format" ; schema1:url . kgr:tads.obo a schema1:OntologyProduct ; rdfs:label "tads.obo" ; dcterms:description "Tick Anatomy Ontology in OBO format" ; schema1:url . kgr:tads.owl a schema1:OntologyProduct ; rdfs:label "tads.owl" ; dcterms:description "Tick Anatomy Ontology in OWL format" ; schema1:url . kgr:tao.owl a schema1:OntologyProduct ; rdfs:label "tao.owl" ; dcterms:description "Teleost Anatomy Ontology in OWL format" ; schema1:url . kgr:tarbase.downloads-doc a schema1:DocumentationProduct ; rdfs:label "Downloads Documentation" ; dcterms:description "Downloads page with file format specifications and field descriptions" ; schema1:url . kgr:tarbase.help a schema1:DocumentationProduct ; rdfs:label "Help Documentation" ; dcterms:description "Comprehensive help documentation with query examples and filtering options" ; schema1:url . kgr:tarbase.homo-sapiens a schema1:Product ; rdfs:label "Homo sapiens Interactions" ; dcterms:description "Experimentally validated miRNA-gene interactions for Homo sapiens in tab-delimited format" ; schema1:url . kgr:tarbase.interactions a schema1:GraphicalInterface ; rdfs:label "Interactions Search" ; dcterms:description "Interactive search interface for querying miRNA targets and gene miRNomes with advanced filtering options" ; schema1:url . kgr:tarbase.mus-musculus a schema1:Product ; rdfs:label "Mus musculus Interactions" ; dcterms:description "Experimentally validated miRNA-gene interactions for Mus musculus in tab-delimited format" ; schema1:url . kgr:tarbase.other-species a schema1:Product ; rdfs:label "Other Species Interactions" ; dcterms:description "Experimentally validated miRNA-gene interactions for other species in tab-delimited format" ; schema1:url . kgr:tarbase.portal a schema1:GraphicalInterface ; rdfs:label "TarBase Portal" ; dcterms:description "Web portal for searching and browsing experimentally supported miRNA-gene interactions" ; schema1:url . kgr:tarbase.statistics a schema1:GraphicalInterface ; rdfs:label "Statistics" ; dcterms:description "Statistics page showing database content and coverage metrics" ; schema1:url . kgr:tarbase.textmining a schema1:GraphicalInterface ; rdfs:label "Text-Mining Interface" ; dcterms:description "Text-mining interface for literature-based interaction discovery" ; schema1:url . kgr:tarbase.viral a schema1:Product ; rdfs:label "Viral Species Interactions" ; dcterms:description "Experimentally validated viral miRNA-gene interactions in tab-delimited format" ; schema1:url . kgr:tarbase.visualizations a schema1:GraphicalInterface ; rdfs:label "Visualizations" ; dcterms:description "Network visualization tool for assessing combinatorial effects of multiple miRNAs on common gene targets" ; schema1:url . kgr:taxrank.obo a schema1:OntologyProduct ; rdfs:label "taxrank.obo" ; dcterms:description "Taxonomic rank vocabulary in OBO format" ; schema1:url . kgr:taxrank.owl a schema1:OntologyProduct ; rdfs:label "taxrank.owl" ; dcterms:description "Taxonomic rank vocabulary in OWL format" ; schema1:url . kgr:tcdb.blast a schema1:GraphicalInterface ; rdfs:label "TCDB BLAST" ; dcterms:description "Sequence similarity search interface against TCDB transporter sequences." ; schema1:url . kgr:tcdb.download.acc2tcid a schema1:Product ; rdfs:label "Accessions to TCIDs" ; dcterms:description "Tab-delimited table mapping protein accessions to TC identifiers. The URL ends in .py, but this endpoint serves data, not Python source code." ; schema1:url . kgr:tcdb.download.families a schema1:Product ; rdfs:label "TC Family Definitions" ; dcterms:description "Tab-delimited table with TC family definitions. The URL ends in .py, but this endpoint serves data, not Python source code." ; schema1:url . kgr:tcdb.download.fasta a schema1:Product ; rdfs:label "TCDB Protein Sequences" ; dcterms:description "Complete TCDB protein sequence export." ; schema1:url . kgr:tcdb.download.go a schema1:Product ; rdfs:label "TC Annotation Mapping Table" ; dcterms:description "Tab-delimited annotation mapping table for TC systems. The URL ends in .py, but this endpoint serves data, not Python source code." ; schema1:url . kgr:tcdb.download.pdb a schema1:Product ; rdfs:label "TC Structure Mapping Table" ; dcterms:description "Tab-delimited structure mapping table for TC systems. The URL ends in .py, but this endpoint serves data, not Python source code." ; schema1:url . kgr:tcdb.download.pfam a schema1:Product ; rdfs:label "TC Protein Family Mapping Table" ; dcterms:description "Tab-delimited protein family mapping table for TC systems. The URL ends in .py, but this endpoint serves data, not Python source code." ; schema1:url . kgr:tcdb.download.refseq a schema1:Product ; rdfs:label "Sequence Accessions to TCIDs" ; dcterms:description "Tab-delimited table mapping sequence accessions to TC identifiers. The URL ends in .py, but this endpoint serves data, not Python source code." ; schema1:url . kgr:tcdb.download.substrates a schema1:Product ; rdfs:label "TC Systems to Substrates Table" ; dcterms:description "Tab-delimited table mapping TC systems to substrate identifiers. The URL ends in .py, but this endpoint serves data, not Python source code." ; schema1:url . kgr:tcdb.download.superfamilies a schema1:Product ; rdfs:label "TC Superfamily Mapping" ; dcterms:description "Tab-delimited table mapping systems, subfamilies, and families to superfamilies. The URL ends in .py, but this endpoint serves data, not Python source code." ; schema1:url . kgr:tcdb.download.tcdoms a schema1:Product ; rdfs:label "tcDoms Archive" ; dcterms:description "Precomputed tcDoms dataset archive." ; schema1:url . kgr:tcdb.portal a schema1:GraphicalInterface ; rdfs:label "TCDB Portal" ; dcterms:description "Main web interface for browsing transporter families, proteins, and curated annotations." ; schema1:url . kgr:tcga.gdc_api a schema1:ProgrammingInterface ; rdfs:label "GDC API" ; dcterms:description "Genomic Data Commons Application Programming Interface for programmatic access to TCGA and other cancer genomic data" ; schema1:url . kgr:tcga.gdc_portal a schema1:Product ; rdfs:label "GDC Data Portal" ; dcterms:description "Genomic Data Commons Data Portal providing access to harmonized TCGA data with over 2.5 petabytes of cancer genomic data" ; schema1:url . kgr:tcga.gdc_submission a schema1:GraphicalInterface ; rdfs:label "GDC Data Submission Portal" ; dcterms:description "Data Submission Portal for uploading and managing cancer genomic data submissions to GDC" ; schema1:url . kgr:tcrd.api a schema1:ProgrammingInterface ; rdfs:label "Pharos API" ; dcterms:description "RESTful API providing programmatic access to TCRD data through Pharos for computational workflows and custom applications" ; schema1:url . kgr:tcrd.database_download a schema1:Product ; rdfs:label "TCRD Database Downloads" ; dcterms:description "MySQL database dump files containing the complete TCRD relational database schema and data for local installation and analysis" ; schema1:url . kgr:tcrd.documentation a schema1:DocumentationProduct ; rdfs:label "TCRD Documentation" ; dcterms:description "Comprehensive documentation describing TCRD data sources, schema structure, and usage guidelines" ; schema1:url . kgr:tera.cas-to-mesh-csv a schema1:MappingProduct ; rdfs:label "CAS to MeSH Mapping (CSV)" ; dcterms:description "Mapping file linking CAS Registry Numbers to MeSH identifiers" ; schema1:url . kgr:tera.chebi-to-mesh-csv a schema1:MappingProduct ; rdfs:label "ChEBI to MeSH Mapping (CSV)" ; dcterms:description "Mapping file linking ChEBI identifiers to MeSH identifiers" ; schema1:url . kgr:tera.chembl-to-mesh-csv a schema1:MappingProduct ; rdfs:label "ChEMBL to MeSH Mapping (CSV)" ; dcterms:description "Mapping file linking ChEMBL identifiers to MeSH identifiers" ; schema1:url . kgr:tera.cid-to-mesh-csv a schema1:MappingProduct ; rdfs:label "PubChem CID to MeSH Mapping (CSV)" ; dcterms:description "Mapping file linking PubChem compound identifiers (CID) to MeSH identifiers" ; schema1:url . kgr:tera.documentation a schema1:DocumentationProduct ; rdfs:label "TERA Documentation" ; dcterms:description "API documentation for the TERA knowledge graph package" ; schema1:url . kgr:tera.ecotox-chemical-nt a schema1:Product ; rdfs:label "ECOTOX Chemical Data (N-Triples)" ; dcterms:description "Chemical data from EPA ECOTOX in N-Triples RDF format" ; schema1:url . kgr:tera.ecotox-taxonomy-nt a schema1:Product ; rdfs:label "ECOTOX Taxonomy Data (N-Triples)" ; dcterms:description "Taxonomy data from EPA ECOTOX in N-Triples RDF format" ; schema1:url . kgr:tera.effects-nt a schema1:Product ; rdfs:label "Effects Data (N-Triples)" ; dcterms:description "Chemical effects data in N-Triples RDF format" ; schema1:url . kgr:tera.mesh-nt a schema1:Product ; rdfs:label "MeSH Data (N-Triples)" ; dcterms:description "MeSH (Medical Subject Headings) data in N-Triples RDF format" ; schema1:url . kgr:tera.ncbi-nt a schema1:Product ; rdfs:label "NCBI Taxonomy Data (N-Triples)" ; dcterms:description "NCBI Taxonomy data in N-Triples RDF format" ; schema1:url . kgr:tera.ncbi-to-eol-csv a schema1:MappingProduct ; rdfs:label "NCBI to EOL Mapping (CSV)" ; dcterms:description "Mapping file linking NCBI Taxonomy identifiers to Encyclopedia of Life identifiers" ; schema1:url . kgr:tera.python-package a schema1:ProgrammingInterface ; rdfs:label "TERA Python Package" ; dcterms:description "Python package providing APIs for data aggregation, integration, and access of TERA knowledge graph" . kgr:tera.traits-nt a schema1:Product ; rdfs:label "EOL Traits Data (N-Triples)" ; dcterms:description "Encyclopedia of Life traits data in N-Triples RDF format" ; schema1:url . kgr:tera.zenodo-dataset a schema1:Product ; rdfs:label "TERA Knowledge Graph Dataset (Zenodo)" ; dcterms:description "TERA knowledge graph dataset snapshot version 1.1.0 hosted on Zenodo, including NT files and CSV mappings" ; schema1:url . kgr:text-mining-kp.graph a schema1:GraphProduct ; rdfs:label "Text Mining KP Release Files" ; dcterms:description "Release files for the Text Mining KP" ; schema1:url . kgr:tgma.obo a schema1:OntologyProduct ; rdfs:label "tgma.obo" ; dcterms:description "Mosquito gross anatomy ontology in OBO format" ; schema1:url . kgr:tgma.owl a schema1:OntologyProduct ; rdfs:label "tgma.owl" ; dcterms:description "Mosquito gross anatomy ontology in OWL format" ; schema1:url . kgr:tiga.downloads a schema1:Product ; rdfs:label "TIGA Downloads" ; dcterms:description "Download directory for TIGA data exports and releases." ; schema1:url . kgr:tiga.portal a schema1:GraphicalInterface ; rdfs:label "TIGA Web Application" ; dcterms:description "Web application for exploring TIGA evidence-ranked gene-trait associations." ; schema1:url . kgr:tissues.downloads a schema1:Product ; rdfs:label "TISSUES Data Downloads" ; dcterms:description "Downloadable datasets of tissue expression evidence including integrated scores and source-specific data" ; schema1:url . kgr:tissues.search a schema1:GraphicalInterface ; rdfs:label "TISSUES Search" ; dcterms:description "Search interface for querying genes, proteins, and tissues" ; schema1:url . kgr:tissues.web a schema1:GraphicalInterface ; rdfs:label "TISSUES Web Interface" ; dcterms:description "Web interface for searching and visualizing tissue expression data with schematic human body visualization" ; schema1:url . kgr:tmrnawebsite.alignments a schema1:Product ; rdfs:label "tmRNA and SmpB Alignments" ; dcterms:description "Multiple sequence alignments for 632 tmRNA and 2,258 distinct SmpB sequences" ; schema1:url . kgr:tmrnawebsite.blast a schema1:Product ; rdfs:label "tmRNA Website BLAST" ; dcterms:description "BLAST search interface for tmRNA and SmpB sequence similarity searches" ; schema1:url . kgr:tmrnawebsite.krona-viewer a schema1:Product ; rdfs:label "tmRNA Krona Phylogenetic Viewer" ; dcterms:description "Krona-based interactive phylogenetic visualization tool for 9,387 tmRNA instances" ; schema1:url . kgr:tmrnawebsite.portal a schema1:GraphicalInterface ; rdfs:label "tmRNA Website Portal" ; dcterms:description "Main web portal for searching and browsing tmRNA and SmpB sequences with phylogenetic navigation" ; schema1:url . kgr:tmrnawebsite.software a schema1:Product ; rdfs:label "tmRNA Identification Software" ; dcterms:description "Software tools (tFind.pl, rFind.pl) for identifying tmRNA genes in genomic sequences" ; schema1:url . kgr:to.obo a schema1:OntologyProduct ; rdfs:label "to.obo" ; dcterms:description "Plant Trait Ontology in OBO format" ; schema1:url . kgr:to.owl a schema1:OntologyProduct ; rdfs:label "to.owl" ; dcterms:description "Plant Trait Ontology in OWL format" ; schema1:url . kgr:topmed.data-access a schema1:GraphicalInterface ; rdfs:label "TOPMed Data Access" ; dcterms:description "TOPMed data access page with instructions and links for controlled-access data workflows." ; schema1:url . kgr:topmed.portal a schema1:GraphicalInterface ; rdfs:label "TOPMed Portal" ; dcterms:description "TOPMed program website for navigating cohorts, resources, and program documentation." ; schema1:url . kgr:topmed.wgs-counts a schema1:DocumentationProduct ; rdfs:label "TOPMed WGS Counts PDF" ; dcterms:description "PDF summary table of whole-genome sequencing counts available in TOPMed." ; schema1:url . kgr:toxcast.api a schema1:ProgrammingInterface ; rdfs:label "CompTox Chemicals Dashboard API (ToxCast)" ; dcterms:description "REST API providing programmatic access to ToxCast-related assay, chemical, and bioactivity data via the CompTox Chemicals Dashboard." ; schema1:url . kgr:toxcast.downloads a schema1:Product ; rdfs:label "ToxCast Bulk Data Downloads" ; dcterms:description "Bulk release archives (assay annotations, hit-call data, summary tables) for ToxCast phases." ; schema1:url . kgr:toxcast.portal a schema1:GraphicalInterface ; rdfs:label "EPA ToxCast Portal" ; dcterms:description "Landing page describing the ToxCast high-throughput screening program and providing links to data and documentation." ; schema1:url . kgr:toxin.web a schema1:GraphicalInterface ; rdfs:label "TOXIN Search Portal" ; dcterms:description "Web portal for searching and exploring toxic compounds, targets, and pathway relationships in the TOXIN knowledge graph." ; schema1:url . kgr:trans.obo a schema1:OntologyProduct ; rdfs:label "trans.obo" ; dcterms:description "Pathogen Transmission Ontology in OBO format" ; schema1:url . kgr:trans.owl a schema1:OntologyProduct ; rdfs:label "trans.owl" ; dcterms:description "Pathogen Transmission Ontology in OWL format" ; schema1:url . kgr:translator-program a "Organization" ; rdfs:label "NCATS Biomedical Translator Program" . kgr:try.portal a schema1:Product ; rdfs:label "TRY Data Portal" ; dcterms:description "Trait data available through the TRY data portal (access upon request/registration)" ; schema1:url . kgr:ttd.biomarker-disease a schema1:Product ; rdfs:label "Biomarker-Disease Mapping" ; dcterms:description "Biomarker to disease mapping with ICD identifiers" ; schema1:url . kgr:ttd.crossmatch a schema1:Product ; rdfs:label "Cross-matching Drug IDs" ; dcterms:description "Cross-matching identifiers between TTD drugs and public databases" ; schema1:url . kgr:ttd.drug-combinations a schema1:Product ; rdfs:label "Drug Combinations" ; dcterms:description "Drug combination data including synergistic, additive, and antagonistic interactions" ; schema1:url . kgr:ttd.drug-disease a schema1:Product ; rdfs:label "Drug-Disease Mapping" ; dcterms:description "Drug to disease mapping with ICD identifiers" ; schema1:url . kgr:ttd.drugs-raw a schema1:Product ; rdfs:label "TTD Drug Information" ; dcterms:description "Raw format drug information including all TTD drug data" ; schema1:url . kgr:ttd.help a schema1:DocumentationProduct ; rdfs:label "TTD Help Documentation" ; dcterms:description "Help documentation and user guide for TTD" ; schema1:url . kgr:ttd.portal a schema1:GraphicalInterface ; rdfs:label "TTD Web Portal" ; dcterms:description "Main web portal for browsing and searching TTD targets, drugs, biomarkers, and pathways" ; schema1:url . kgr:ttd.sequences-all a schema1:Product ; rdfs:label "All Target Sequences" ; dcterms:description "Sequence data for all targets in FASTA format" ; schema1:url . kgr:ttd.smiles-inchi a schema1:Product ; rdfs:label "Drug SMILES and InChI" ; dcterms:description "SMILES and InChI representations for approved drugs" ; schema1:url . kgr:ttd.structures-all a schema1:Product ; rdfs:label "All Drug Structures" ; dcterms:description "Structure data for all drugs in SDF format" ; schema1:url . kgr:ttd.synonyms a schema1:Product ; rdfs:label "Drug Synonyms" ; dcterms:description "Synonyms of drugs and small molecules in TTD" ; schema1:url . kgr:ttd.target-compound a schema1:Product ; rdfs:label "Target-Compound Activity Data" ; dcterms:description "Target to compound mapping with experimental activity data" ; schema1:url . kgr:ttd.target-disease a schema1:Product ; rdfs:label "Target-Disease Mapping" ; dcterms:description "Target to disease mapping with ICD identifiers" ; schema1:url . kgr:ttd.target-drug a schema1:Product ; rdfs:label "Target-Drug Mapping" ; dcterms:description "Target to drug mapping with mode of action information" ; schema1:url . kgr:ttd.targets-raw a schema1:Product ; rdfs:label "TTD Targets Information" ; dcterms:description "Raw format target information including all TTD target data" ; schema1:url . kgr:tto.obo a schema1:OntologyProduct ; rdfs:label "tto.obo" ; dcterms:description "Teleost taxonomy ontology in OBO format" ; schema1:url . kgr:tto.owl a schema1:OntologyProduct ; rdfs:label "tto.owl" ; dcterms:description "Teleost taxonomy ontology in OWL format" ; schema1:url . kgr:txpo.owl a schema1:OntologyProduct ; rdfs:label "txpo.owl" ; dcterms:description "Toxic Process Ontology in OWL format" ; schema1:url . kgr:ubergraph.blazegraph.jnl a schema1:Product ; rdfs:label "Ubergraph blazegraph journal" ; dcterms:description "Blazegraph journal of Ubergraph" ; schema1:url . kgr:ubergraph.nquads a schema1:Product ; rdfs:label "Ubergraph n-quads" ; dcterms:description "Ubergraph n-quads" ; schema1:url . kgr:ubergraph.rdf a schema1:Product ; rdfs:label "Ubergraph RDF" ; dcterms:description "RDF of Ubergraph" ; schema1:url . kgr:uberon.collected-metazoan.owl a schema1:OntologyProduct ; rdfs:label "Uberon collected metazoan ontology" ; dcterms:description "Uberon plus all metazoan ontologies" ; schema1:url . kgr:uberon.composite-metazoan.owl a schema1:OntologyProduct ; rdfs:label "Uberon composite metazoan ontology" ; dcterms:description "Uberon and all metazoan ontologies with redundant species-specific terms removed" ; schema1:url . kgr:uberon.composite-vertebrate.owl a schema1:OntologyProduct ; rdfs:label "Uberon composite vertebrate ontology" ; dcterms:description "Uberon composite vertebrate ontology" ; schema1:url . kgr:uberon.owl a schema1:OntologyProduct ; rdfs:label "Uberon" ; dcterms:description "core ontology" ; schema1:url . kgr:uberon.uberon-base.owl a schema1:OntologyProduct ; rdfs:label "Uberon base ontology" ; dcterms:description "Axioms defined within Uberon and to be used in imports for other ontologies" ; schema1:url . kgr:uberon.uberon-basic.obo a schema1:OntologyProduct ; rdfs:label "Uberon basic" ; dcterms:description "Uberon edition that excludes external ontologies and most relations" ; schema1:url . kgr:ubkg.api a schema1:ProgrammingInterface ; rdfs:label "UBKG API" ; dcterms:description "REST API with endpoints that abstract common types of queries against a UBKG neo4j knowledge graph database. Requires UMLS API key to access." ; schema1:url . kgr:ubkg.guesdt a schema1:GraphicalInterface ; rdfs:label "UBKG Guesdt Interface" ; dcterms:description "Guesdt (Graphing UMLS Enables Search In Dynamic Trees) application used to represent the UBKG in a tree view." ; schema1:url . kgr:ucsb-geography a "Organization" ; rdfs:label "University of California, Santa Barbara - Department of Geography" . kgr:uf-okn.code a schema1:ProcessProduct ; rdfs:label "UF-OKN Source Code" ; dcterms:description "Source repository for UF-OKN knowledge graph construction and maintenance." ; schema1:url . kgr:uf-okn.portal a schema1:GraphicalInterface ; rdfs:label "UF-OKN Portal" ; dcterms:description "Public UF-OKN web portal for project information and application context." ; schema1:url . kgr:ukbiobank.showcase a schema1:GraphicalInterface ; rdfs:label "UK Biobank Data Showcase" ; dcterms:description "The UK Biobank Data Showcase provides summary statistics of all UK Biobank data and allows researchers to identify variables for inclusion in research applications." ; schema1:url . kgr:umls.api a schema1:ProgrammingInterface ; rdfs:label "UMLS Terminology Services API" ; dcterms:description "REST API providing programmatic access to UMLS Metathesaurus, Semantic Network, and related terminology services" ; schema1:url . kgr:umls.browser a schema1:GraphicalInterface ; rdfs:label "UMLS Metathesaurus Browser" ; dcterms:description "Web interface for browsing UMLS Metathesaurus concepts, CUIs, semantic types, and synonymous terms" ; schema1:url . kgr:umls.metamorphosys a schema1:ProcessProduct ; rdfs:label "MetamorphoSys Customization Tool" ; dcterms:description "MetamorphoSys tool for customizing UMLS subsets by vocabulary, language, or semantic type and loading data into local databases" ; schema1:url . kgr:umls.release a schema1:Product ; rdfs:label "UMLS Knowledge Sources Release Files" ; dcterms:description "Full UMLS Knowledge Sources release including Metathesaurus, Semantic Network, and SPECIALIST Lexicon for local installation with MetamorphoSys customization tool" ; schema1:url . kgr:umls.semantic_network_browser a schema1:GraphicalInterface ; rdfs:label "UMLS Semantic Network Browser" ; dcterms:description "Web interface for viewing semantic types, definitions, and hierarchical structure of the UMLS Semantic Network" ; schema1:url . kgr:umls.specialist_lexicon a schema1:ProcessProduct ; rdfs:label "SPECIALIST Lexicon and Lexical Tools" ; dcterms:description "SPECIALIST Lexicon and Lexical Tools for normalizing strings, generating lexical variants, and creating indexes for biomedical text processing" ; schema1:url . kgr:unibiomap.code a schema1:ProcessProduct ; rdfs:label "UniBioMap Code" ; dcterms:description "Source code and pipelines used to build the UniBioMap knowledge graph." ; schema1:url . kgr:unibiomap.compound_desc a schema1:GraphProduct ; rdfs:label "UniBioMap Compound Descriptions" ; dcterms:description "UniBioMap compound entity descriptions." ; schema1:url . kgr:unibiomap.disease_desc a schema1:GraphProduct ; rdfs:label "UniBioMap Disease Descriptions" ; dcterms:description "UniBioMap disease entity descriptions." ; schema1:url . kgr:unibiomap.pathway_desc a schema1:GraphProduct ; rdfs:label "UniBioMap Pathway Descriptions" ; dcterms:description "UniBioMap pathway entity descriptions." ; schema1:url . kgr:unibiomap.phenotype_desc a schema1:GraphProduct ; rdfs:label "UniBioMap Phenotype Descriptions" ; dcterms:description "UniBioMap phenotype entity descriptions." ; schema1:url . kgr:unibiomap.protein_desc a schema1:GraphProduct ; rdfs:label "UniBioMap Protein Descriptions" ; dcterms:description "UniBioMap protein entity descriptions." ; schema1:url . kgr:unibiomap.web a schema1:GraphicalInterface ; rdfs:label "UniBioMap Website" ; dcterms:description "Web interface for browsing UniBioMap resources and documentation." ; schema1:url . kgr:unichem.api a schema1:ProgrammingInterface ; rdfs:label "UniChem REST API" ; dcterms:description "RESTful web services API for programmatic access to UniChem cross-references and connectivity searches" ; schema1:url . kgr:unichem.docs a schema1:DocumentationProduct ; rdfs:label "UniChem Documentation" ; dcterms:description "Complete documentation covering UniChem functionality, API usage, data model, and integration guidelines" ; schema1:url . kgr:unichem.docs.uci a schema1:DocumentationProduct ; rdfs:label "UCI Documentation Entry Point" ; dcterms:description "UniChem compound sources page illustrating the UCI identifier namespace." ; schema1:url . kgr:unichem.search a schema1:GraphicalInterface ; rdfs:label "UniChem Search Interface" ; dcterms:description "Web-based search interface for finding compound sources and performing connectivity searches across chemical databases" ; schema1:url . kgr:unichem.sources a schema1:Product ; rdfs:label "UniChem Source Database List" ; dcterms:description "Comprehensive list of all integrated chemistry databases and their metadata in UniChem" ; schema1:url . kgr:unii.data a schema1:Product ; rdfs:label "UNII Data Download" ; dcterms:description "Comprehensive UNII data with detailed substance attributes and mappings" ; schema1:url . kgr:unii.legacy a schema1:Product ; rdfs:label "Legacy UNIIs" ; dcterms:description "Legacy UNII identifiers for historical substances" ; schema1:url . kgr:unii.list a schema1:Product ; rdfs:label "UNII List Download" ; dcterms:description "Downloadable list of all UNIIs with basic substance information" ; schema1:url . kgr:unii.search a schema1:GraphicalInterface ; rdfs:label "UNII Search Service" ; dcterms:description "Web-based search interface for finding substances by UNII, name, or other identifiers" ; schema1:url . kgr:uniprot.swissprot.fasta a schema1:Product ; rdfs:label "Reviewed (Swiss-Prot) FASTA" ; dcterms:description "The Reviewed (Swiss-Prot) section of UniProt proteins" ; schema1:url . kgr:uniprot.swissprot.xml a schema1:Product ; rdfs:label "Reviewed (Swiss-Prot) XML" ; dcterms:description "The Reviewed (Swiss-Prot) section of UniProt proteins" ; schema1:url . kgr:uniprot.trembl.fasta a schema1:Product ; rdfs:label "Unreviewed (TrEMBL) FASTA" ; dcterms:description "The Unreviewed (TrEMBL) section of UniProt proteins" ; schema1:url . kgr:uniprot.trembl.xml a schema1:Product ; rdfs:label "Unreviewed (TrEMBL) XML" ; dcterms:description "The Unreviewed (TrEMBL) section of UniProt proteins" ; schema1:url . kgr:uniref.api a schema1:ProgrammingInterface ; rdfs:label "UniRef REST API" ; dcterms:description "RESTful API for programmatic access to UniRef cluster data supporting queries, downloads, and integration with bioinformatics workflows" ; schema1:url . kgr:uniref.portal a schema1:GraphicalInterface ; rdfs:label "UniRef Web Portal" ; dcterms:description "Web interface for searching, browsing, and analyzing UniRef cluster information with advanced search capabilities and visualization tools" ; schema1:url . kgr:uniref.uniref100.fasta a schema1:Product ; rdfs:label "UniRef100 FASTA" ; dcterms:description "UniRef100 database combining identical protein sequences and sub-fragments with 11-residue overlap into single representative entries, providing complete sequence coverage with 100% identity clustering" ; schema1:url . kgr:uniref.uniref100.xml a schema1:Product ; rdfs:label "UniRef100 XML" ; dcterms:description "UniRef100 database in XML format with comprehensive metadata including cluster membership, representative sequences, taxonomy, and cross-references" ; schema1:url . kgr:uniref.uniref50.fasta a schema1:Product ; rdfs:label "UniRef50 FASTA" ; dcterms:description "UniRef50 database clustering sequences with at least 50% sequence identity and 80% overlap, providing fast sequence searches with broad coverage of protein sequence space" ; schema1:url . kgr:uniref.uniref50.xml a schema1:Product ; rdfs:label "UniRef50 XML" ; dcterms:description "UniRef50 database in XML format with detailed cluster annotations and relationships" ; schema1:url . kgr:uniref.uniref90.fasta a schema1:Product ; rdfs:label "UniRef90 FASTA" ; dcterms:description "UniRef90 database clustering sequences with at least 90% sequence identity and 80% overlap, balancing speed and sensitivity for sequence searches" ; schema1:url . kgr:uniref.uniref90.xml a schema1:Product ; rdfs:label "UniRef90 XML" ; dcterms:description "UniRef90 database in XML format with complete cluster information and annotations" ; schema1:url . kgr:univ-lorraine a "Organization" ; rdfs:label "Université de Lorraine" . kgr:uo.json a schema1:OntologyProduct ; rdfs:label "uo.json" ; dcterms:description "Units of measurement ontology in JSON format" ; schema1:url . kgr:uo.obo a schema1:OntologyProduct ; rdfs:label "uo.obo" ; dcterms:description "Units of measurement ontology in OBO format" ; schema1:url . kgr:uo.owl a schema1:OntologyProduct ; rdfs:label "uo.owl" ; dcterms:description "Units of measurement ontology in OWL format" ; schema1:url . kgr:upa.obo a schema1:OntologyProduct ; rdfs:label "upa.obo" ; dcterms:description "Unipathway in OBO format" ; schema1:url . kgr:upa.owl a schema1:OntologyProduct ; rdfs:label "upa.owl" ; dcterms:description "Unipathway in OWL format" ; schema1:url . kgr:upheno.mp-hp-view.owl a schema1:OntologyProduct ; rdfs:label "uPheno MP-HP equivalence axioms" ; dcterms:description "No longer actively maintained." ; schema1:url . kgr:upheno.owl a schema1:OntologyProduct ; rdfs:label "uPheno 1 (inactive)" ; dcterms:description "uPheno 1 is no longer actively maintained, please start using uPheno 2 (see below)." ; schema1:url . kgr:upheno.v2.upheno.owl a schema1:OntologyProduct ; rdfs:label "uPheno 2" ; dcterms:description "The new version of uPheno, along with species independent phenotypes and additional phenotype relations. The ontology is still in Beta status, but we recommend users to migrate their infrastructures to uPheno 2 as uPheno 1 is no longer actively maintained." ; schema1:url . kgr:utoronto a "Organization" ; rdfs:label "University of Toronto" . kgr:vario.obo a schema1:OntologyProduct ; rdfs:label "VariO in OBO format" ; dcterms:description "VariO in OBO format" ; schema1:url . kgr:vario.owl a schema1:OntologyProduct ; rdfs:label "VariO main release in OWL" ; dcterms:description "VariO main release in OWL" ; schema1:url . kgr:vbo.json a schema1:OntologyProduct ; rdfs:label "vbo.json" ; dcterms:description "Vertebrate Breed Ontology in JSON format" ; schema1:url . kgr:vbo.obo a schema1:OntologyProduct ; rdfs:label "vbo.obo" ; dcterms:description "Vertebrate Breed Ontology in OBO format" ; schema1:url . kgr:vbo.owl a schema1:OntologyProduct ; rdfs:label "vbo.owl" ; dcterms:description "Vertebrate Breed Ontology in OWL format" ; schema1:url . kgr:vbo.vbo-base.json a schema1:OntologyProduct ; rdfs:label "vbo.vbo-base.json" ; dcterms:description "Vertebrate Breed Ontology in JSON format" ; schema1:url . kgr:vbo.vbo-base.obo a schema1:OntologyProduct ; rdfs:label "vbo.vbo-base.obo" ; dcterms:description "Vertebrate Breed Ontology in OBO format" ; schema1:url . kgr:vbo.vbo-base.owl a schema1:OntologyProduct ; rdfs:label "vbo.vbo-base.owl" ; dcterms:description "Vertebrate Breed Ontology in OWL format" ; schema1:url . kgr:vectology.api a schema1:ProgrammingInterface ; rdfs:label "Vectology API" ; dcterms:description "Public API providing access to sentence embedding-based similarity endpoints and variable vector queries" ; schema1:url . kgr:vectology.docs a schema1:DocumentationProduct ; rdfs:label "Vectology Project Page" ; dcterms:description "Project information page including description, maintenance status, contacts, and publication reference" ; schema1:url . kgr:vhog.owl a schema1:OntologyProduct ; rdfs:label "vhog.owl" ; dcterms:description "Vertebrate Homologous Ontology Group Ontology in OWL format" ; schema1:url . kgr:vliz a "Organization" ; rdfs:label "Flanders Marine Institute (VLIZ)" . kgr:vo.owl a schema1:OntologyProduct ; rdfs:label "vo.owl" ; dcterms:description "Vaccine Ontology in OWL format" ; schema1:url . kgr:vsao.owl a schema1:OntologyProduct ; rdfs:label "vsao.owl" ; dcterms:description "Vertebrate Skeletal Anatomy Ontology- in OWL format" ; schema1:url . kgr:vt.owl a schema1:OntologyProduct ; rdfs:label "vt.owl" ; dcterms:description "Vertebrate trait ontology in OWL format" ; schema1:url . kgr:vto.obo a schema1:OntologyProduct ; rdfs:label "vto.obo" ; dcterms:description "Vertebrate Taxonomy Ontology in OBO format" ; schema1:url . kgr:vto.owl a schema1:OntologyProduct ; rdfs:label "vto.owl" ; dcterms:description "Vertebrate Taxonomy Ontology in OWL format" ; schema1:url . kgr:wbbt.obo a schema1:OntologyProduct ; rdfs:label "wbbt.obo" ; dcterms:description "C. elegans Gross Anatomy Ontology in OBO format" ; schema1:url . kgr:wbbt.owl a schema1:OntologyProduct ; rdfs:label "wbbt.owl" ; dcterms:description "C. elegans Gross Anatomy Ontology in OWL format" ; schema1:url . kgr:wbls.obo a schema1:OntologyProduct ; rdfs:label "wbls.obo" ; dcterms:description "C. elegans development ontology in OBO format" ; schema1:url . kgr:wbls.owl a schema1:OntologyProduct ; rdfs:label "wbls.owl" ; dcterms:description "C. elegans development ontology in OWL format" ; schema1:url . kgr:wbphenotype.obo a schema1:OntologyProduct ; rdfs:label "wbphenotype.obo" ; dcterms:description "C. elegans phenotype in OBO format" ; schema1:url . kgr:wbphenotype.owl a schema1:OntologyProduct ; rdfs:label "wbphenotype.owl" ; dcterms:description "C. elegans phenotype in OWL format" ; schema1:url . kgr:wbphenotype.wbphenotype-base.owl a schema1:OntologyProduct ; rdfs:label "wbphenotype.wbphenotype-base.owl" ; dcterms:description "C. elegans phenotype in OWL format" ; schema1:url . kgr:who a "Organization" ; rdfs:label "WHO Family of International Classifications", "World Health Organization" . kgr:wikidata.api a schema1:ProgrammingInterface ; rdfs:label "Wikidata Action API" ; dcterms:description "RESTful API providing programmatic access to Wikidata content, allowing reading and editing of items, properties, and statements" ; schema1:url . kgr:wikidata.dumps.incremental a schema1:Product ; rdfs:label "Wikidata Incremental Dumps" ; dcterms:description "Incremental add/change dumps that cover the previous 24 hours" ; schema1:url . kgr:wikidata.dumps.json a schema1:Product ; rdfs:label "Wikidata JSON Entity Dumps" ; dcterms:description "JSON dumps containing all Wikidata entities" ; schema1:url . kgr:wikidata.dumps.lexemes.json a schema1:Product ; rdfs:label "Wikidata Lexeme JSON Dump" ; dcterms:description "Lexeme namespace JSON dump" ; schema1:url . kgr:wikidata.dumps.lexemes.nt a schema1:Product ; rdfs:label "Wikidata Lexeme RDF Dump (N-Triples)" ; dcterms:description "Lexeme namespace RDF dump in N-Triples format" ; schema1:url . kgr:wikidata.dumps.lexemes.ttl a schema1:Product ; rdfs:label "Wikidata Lexeme RDF Dump (Turtle)" ; dcterms:description "Lexeme namespace RDF dump in Turtle format" ; schema1:url . kgr:wikidata.dumps.rdf.full.nt a schema1:Product ; rdfs:label "Wikidata RDF Full Dump (N-Triples)" ; dcterms:description "Canonical full-statement RDF dump in N-Triples format (the \"all\" dump)" ; schema1:url . kgr:wikidata.dumps.rdf.full.ttl a schema1:Product ; rdfs:label "Wikidata RDF Full Dump (Turtle)" ; dcterms:description "Canonical full-statement RDF dump in Turtle format (the \"all\" dump)" ; schema1:url . kgr:wikidata.dumps.rdf.truthy.nt a schema1:Product ; rdfs:label "Wikidata RDF Truthy Dump (N-Triples)" ; dcterms:description "RDF \"truthy\" dump in N-Triples format containing direct values from best-rank statements only" ; schema1:url . kgr:wikidata.dumps.xml a schema1:Product ; rdfs:label "Wikidata XML Dumps" ; dcterms:description "Full XML database dumps of Wikidata" ; schema1:url . kgr:wikidata.entity.api a schema1:ProgrammingInterface ; rdfs:label "Wikidata Entity Data API" ; dcterms:description "REST API for accessing entity data in JSON format with content negotiation support" ; schema1:url . kgr:wikidata.portal a schema1:GraphicalInterface ; rdfs:label "Wikidata Web Portal" ; dcterms:description "Main web interface for browsing, searching, and editing Wikidata items, properties, and statements with over 119 million data items" ; schema1:url . kgr:wikidata.query.editor a schema1:GraphicalInterface ; rdfs:label "Wikidata Query Service Interface" ; dcterms:description "Interactive web-based SPARQL query editor with example queries, visualization tools, and query assistance for exploring Wikidata" ; schema1:url . kgr:wikidata.sparql a schema1:ProgrammingInterface ; rdfs:label "Wikidata SPARQL Query Service" ; dcterms:description "SPARQL endpoint for querying Wikidata using semantic web query language, enabling complex queries across the knowledge graph" ; schema1:url . kgr:wikimedia a "Organization" ; rdfs:label "Wikimedia Foundation" . kgr:wikipathways.gmt a schema1:Product ; rdfs:label "WikiPathways GMT" ; dcterms:description "Pathways in Gene Matrix Transposed (GMT) format for Gene Set Enrichment Analysis" ; schema1:url . kgr:wikipathways.gpml a schema1:Product ; rdfs:label "WikiPathways GPML" ; dcterms:description "Pathways in Graphical Pathway Markup Language (GPML) format, which is a custom XML format for biological pathways" ; schema1:url . kgr:wikipathways.rdf a schema1:Product ; rdfs:label "WikiPathways RDF" ; dcterms:description "Pathways in RDF (Resource Description Framework) format" ; schema1:url . kgr:wikipathways.sparql a schema1:ProgrammingInterface ; rdfs:label "WikiPathways SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for querying WikiPathways content" ; schema1:url . kgr:wikipathways.web a schema1:GraphicalInterface ; rdfs:label "WikiPathways Web Interface" ; dcterms:description "The main web interface for browsing, viewing, and downloading pathways" ; schema1:url . kgr:wildlifekn.sparql a schema1:ProgrammingInterface ; rdfs:label "Wildlife-KN SPARQL" ; dcterms:description "SPARQL endpoint for Wildlife-KN" ; schema1:url . kgr:wishart-lab a "Organization" ; rdfs:label "Wishart Lab (University of Alberta)" . kgr:wormbase.api a schema1:ProgrammingInterface ; rdfs:label "WormBase REST API" ; dcterms:description "REST API providing programmatic access to WormBase data including genes, proteins, variations, and annotations" ; schema1:url . kgr:wormbase.ftp a schema1:Product ; rdfs:label "WormBase FTP Downloads" ; dcterms:description "FTP server providing bulk downloads of genome assemblies, annotations, gene models, and other WormBase data files" ; schema1:url . kgr:wormbase.gbrowse a schema1:GraphicalInterface ; rdfs:label "WormBase GBrowse" ; dcterms:description "Genome browser for visualizing genes, transcripts, and genomic features in their chromosomal context" ; schema1:url . kgr:wormbase.parasite a schema1:GraphicalInterface ; rdfs:label "WormBase ParaSite" ; dcterms:description "Sub-portal hosting approximately 100 parasitic helminth genomes with annotations and comparative genomics tools" ; schema1:url . kgr:wormbase.portal a schema1:GraphicalInterface ; rdfs:label "WormBase Web Portal" ; dcterms:description "Primary web portal for browsing and searching nematode genomic and biological data" ; schema1:url . kgr:wormbase.textpresso a schema1:GraphicalInterface ; rdfs:label "Textpresso" ; dcterms:description "Full-text search tool for querying C. elegans and nematode literature with ontology term support" ; schema1:url . kgr:wormbase.wormmine a schema1:GraphicalInterface ; rdfs:label "WormMine" ; dcterms:description "WormMine InterMine instance for complex queries and bulk data retrieval across WormBase datasets" ; schema1:url . kgr:xao.obo a schema1:OntologyProduct ; rdfs:label "xao.obo" ; dcterms:description "Xenopus Anatomy Ontology in OBO format" ; schema1:url . kgr:xao.owl a schema1:OntologyProduct ; rdfs:label "xao.owl" ; dcterms:description "Xenopus Anatomy Ontology in OWL format" ; schema1:url . kgr:xco.obo a schema1:OntologyProduct ; rdfs:label "xco.obo" ; dcterms:description "Experimental condition ontology in OBO format" ; schema1:url . kgr:xco.owl a schema1:OntologyProduct ; rdfs:label "xco.owl" ; dcterms:description "Experimental condition ontology in OWL format" ; schema1:url . kgr:xenbase.apis a schema1:ProgrammingInterface ; rdfs:label "Xenbase APIs and Web Services" ; dcterms:description "REST APIs and web services for programmatic access to Xenbase data" ; schema1:url . kgr:xenbase.blast a schema1:Product ; rdfs:label "Xenbase BLAST Services" ; dcterms:description "BLAST search interface for Xenopus nucleotide and protein sequences" ; schema1:url . kgr:xenbase.expression-data a schema1:Product ; rdfs:label "Gene Expression Data" ; dcterms:description "Curated gene expression data including RNA-seq, in situ hybridization, and microarray data from GEO datasets" ; schema1:url . kgr:xenbase.ftp-downloads a schema1:Product ; rdfs:label "Xenbase Data Downloads" ; dcterms:description "FTP site providing access to Xenopus genome assemblies, gene models, sequences, BLAST databases, and curated data reports" ; schema1:url . kgr:xenbase.genomes a schema1:Product ; rdfs:label "Xenopus Genome Assemblies" ; dcterms:description "Complete genome assemblies and gene models for Xenopus laevis (v10.1) and Xenopus tropicalis (v10.0)" ; schema1:url . kgr:xenbase.jbrowse-laevis a schema1:GraphicalInterface ; rdfs:label "X. laevis JBrowse Genome Browser" ; dcterms:description "Genome browser for Xenopus laevis v10.1 with integrated genomic and expression data" ; schema1:url . kgr:xenbase.jbrowse-tropicalis a schema1:GraphicalInterface ; rdfs:label "X. tropicalis JBrowse Genome Browser" ; dcterms:description "Genome browser for Xenopus tropicalis v10.0 with integrated genomic and expression data" ; schema1:url . kgr:xenbase.phenotype-data a schema1:Product ; rdfs:label "Phenotype and Mutant Data" ; dcterms:description "Comprehensive phenotype and mutant data including disease models and morphant phenotypes" ; schema1:url . kgr:xenbase.web-portal a schema1:GraphicalInterface ; rdfs:label "Xenbase Web Portal" ; dcterms:description "Web-based interface for exploring Xenopus biological data including genome browsers, gene expression searches, anatomy atlases, and phenotype databases" ; schema1:url . kgr:xenbase.wiki a schema1:DocumentationProduct ; rdfs:label "Xenbase Community Wiki" ; dcterms:description "Community wiki with protocols, methods, and resources for Xenopus research" ; schema1:url . kgr:xlmod.obo a schema1:OntologyProduct ; rdfs:label "xlmod.obo" ; dcterms:description "HUPO-PSI cross-linking and derivatization reagents controlled vocabulary in OBO format" ; schema1:url . kgr:xlmod.owl a schema1:OntologyProduct ; rdfs:label "xlmod.owl" ; dcterms:description "HUPO-PSI cross-linking and derivatization reagents controlled vocabulary in OWL format" ; schema1:url . kgr:xpo.obo a schema1:OntologyProduct ; rdfs:label "xpo.obo" ; dcterms:description "Xenopus Phenotype Ontology in OBO format" ; schema1:url . kgr:xpo.owl a schema1:OntologyProduct ; rdfs:label "xpo.owl" ; dcterms:description "Xenopus Phenotype Ontology in OWL format" ; schema1:url . kgr:zeco.json a schema1:OntologyProduct ; rdfs:label "zeco.json" ; dcterms:description "Zebrafish Experimental Conditions Ontology in JSON format" ; schema1:url . kgr:zeco.obo a schema1:OntologyProduct ; rdfs:label "zeco.obo" ; dcterms:description "Zebrafish Experimental Conditions Ontology in OBO format" ; schema1:url . kgr:zeco.owl a schema1:OntologyProduct ; rdfs:label "zeco.owl" ; dcterms:description "Zebrafish Experimental Conditions Ontology in OWL format" ; schema1:url . kgr:zfa.obo a schema1:OntologyProduct ; rdfs:label "zfa.obo" ; dcterms:description "Zebrafish anatomy and development ontology in OBO format" ; schema1:url . kgr:zfa.owl a schema1:OntologyProduct ; rdfs:label "zfa.owl" ; dcterms:description "Zebrafish anatomy and development ontology in OWL format" ; schema1:url . kgr:zfin.gene-to-phenotype a schema1:Product ; rdfs:label "ZFIN clean gene to phenotype" ; dcterms:description "Phenotype of Zebrafish Genes" ; schema1:url . kgr:zfin.gene-to-publication a schema1:Product ; rdfs:label "ZFIN gene to publication" ; dcterms:description "Phenotype of Zebrafish Genes" ; schema1:url . kgr:zfin.zfa a schema1:Product ; rdfs:label "ZFA" ; dcterms:description "Zebrafish Anatomical Ontology (OWL)" ; schema1:url . kgr:zfs.obo a schema1:OntologyProduct ; rdfs:label "zfs.obo" ; dcterms:description "Zebrafish developmental stages ontology in OBO format" ; schema1:url . kgr:zfs.owl a schema1:OntologyProduct ; rdfs:label "zfs.owl" ; dcterms:description "Zebrafish developmental stages ontology in OWL format" ; schema1:url . kgr:zp.obo a schema1:OntologyProduct ; rdfs:label "zp.obo" ; dcterms:description "Zebrafish Phenotype Ontology in OBO format" ; schema1:url . kgr:zp.owl a schema1:OntologyProduct ; rdfs:label "zp.owl" ; dcterms:description "Zebrafish Phenotype Ontology in OWL format" ; schema1:url . kgr:zwd.alignments a schema1:Product ; rdfs:label "Zasha Weinberg Data Repository Sequence Alignments" ; dcterms:description "Multiple sequence alignments for RNA and ssDNA sequences" ; schema1:url . kgr:aact.database a schema1:Product ; rdfs:label "AACT Cloud Database" ; dcterms:description "Cloud-based PostgreSQL database with daily refreshed clinical trial data, accessible via standard PostgreSQL clients" ; schema1:url . kgr:aact.downloads a schema1:Product ; rdfs:label "AACT Database Downloads" ; dcterms:description "Static downloadable copies of the complete AACT database" ; schema1:url . kgr:aeolus.standardized_data a schema1:Product ; rdfs:label "AEOLUS Standardized FAERS Data" ; dcterms:description "Standardized and deduplicated version of FDA FAERS data with drug names mapped to RxNorm and adverse event outcomes mapped to SNOMED-CT, including pre-computed summary statistics for drug-outcome relationships." ; schema1:url . kgr:automat.biolink a schema1:GraphProduct ; rdfs:label "biolink_automat" ; dcterms:description "Biolink Automat" ; schema1:url . kgr:automat.ctd a schema1:GraphProduct ; rdfs:label "ctd_automat" ; dcterms:description "CTD Automat" ; schema1:url . kgr:automat.drugcentral a schema1:GraphProduct ; rdfs:label "drugcentral_automat" ; dcterms:description "DrugCentral Automat" ; schema1:url . kgr:automat.gtex a schema1:GraphProduct ; rdfs:label "gtex_automat" ; dcterms:description "GTEx Automat" ; schema1:url . kgr:automat.gtopdb a schema1:GraphProduct ; rdfs:label "gtopdb_automat" ; dcterms:description "GtoPdb Automat" ; schema1:url . kgr:automat.gwascatalog a schema1:GraphProduct ; rdfs:label "gwascatalog_automat" ; dcterms:description "GWASCatalog Automat" ; schema1:url . kgr:automat.hetio a schema1:GraphProduct ; rdfs:label "hetio_automat" ; dcterms:description "Hetio Automat" ; schema1:url . kgr:automat.hgnc a schema1:GraphProduct ; rdfs:label "hgnc_automat" ; dcterms:description "HGNC Automat" ; schema1:url . kgr:automat.hmdb a schema1:GraphProduct ; rdfs:label "hmdb_automat" ; dcterms:description "HMDB Automat" ; schema1:url . kgr:automat.humangoa a schema1:GraphProduct ; rdfs:label "humangoa_automat" ; dcterms:description "HumanGOA Automat" ; schema1:url . kgr:automat.intact a schema1:GraphProduct ; rdfs:label "intact_automat" ; dcterms:description "IntAct Automat" ; schema1:url . kgr:automat.panther a schema1:GraphProduct ; rdfs:label "panther_automat" ; dcterms:description "PANTHER Automat" ; schema1:url . kgr:automat.pharos a schema1:GraphProduct ; rdfs:label "pharos_automat" ; dcterms:description "PHAROS Automat" ; schema1:url . kgr:automat.robokopkg a schema1:GraphProduct ; rdfs:label "robokopkg" ; dcterms:description "Robokop KG (Automat)" ; schema1:url . kgr:automat.robokopplus a schema1:GraphProduct ; rdfs:label "robokopplus" ; dcterms:description "Robokop Plus" ; schema1:url . kgr:automat.stringdb a schema1:GraphProduct ; rdfs:label "stringdb_automat" ; dcterms:description "STRING-DB Automat" ; schema1:url . kgr:automat.ubergraph a schema1:GraphProduct ; rdfs:label "ubergraph_automat" ; dcterms:description "UberGraph Automat" ; schema1:url . kgr:biomarkerkg.nodes.anatomy a schema1:GraphProduct ; rdfs:label "BKG Anatomy Nodes" ; dcterms:description "Nodes from Uber-Anatomy Ontology" ; schema1:url . kgr:biomarkerkg.nodes.biomarker a schema1:GraphProduct ; rdfs:label "BKG Biomarker Nodes" ; dcterms:description "Nodes from GlyGen Biomarker Database" ; schema1:url . kgr:biomarkerkg.nodes.compound a schema1:GraphProduct ; rdfs:label "BKG Compound Nodes" ; dcterms:description "Nodes from PubChem Database" ; schema1:url . kgr:biomarkerkg.nodes.condition a schema1:GraphProduct ; rdfs:label "BKG Condition Nodes" ; dcterms:description "Nodes from Human Disease Ontology" ; schema1:url . kgr:biomarkerkg.nodes.variant a schema1:GraphProduct ; rdfs:label "BKG Variant Nodes" ; dcterms:description "Nodes from dbSNP" ; schema1:url . kgr:cam-kp.ctd-interactions a schema1:Product ; rdfs:label "CTD Chemical-Gene Models" ; dcterms:description "Chemical-gene interaction models and toxicological pathways derived from the Comparative Toxicogenomics Database (CTD) covering 17,700+ chemicals and 55,400 genes" . kgr:cam-kp.go-cams a schema1:Product ; rdfs:label "Gene Ontology CAMs" ; dcterms:description "Gene Ontology Causal Activity Model (GO-CAM) annotations manually curated by Gene Ontology biocurators linking genes, proteins, and biological processes" . kgr:cam-kp.reactome-cams a schema1:Product ; rdfs:label "Reactome Pathway CAMs" ; dcterms:description "Causal Activity Model graphs automatically generated from Reactome pathways using the Pathways2GO tool, translating pathway reactions to causal relationships" . kgr:chembl.map_to_uniprot a schema1:MappingProduct ; rdfs:label "ChEMBL map to UniProt" ; dcterms:description "Mapping between chembl_35 target chembl_ids and UniProt accessions" ; schema1:url . kgr:fda a "Organization" ; rdfs:label "FDA Center for Drug Evaluation and Research", "FDA Substance Registration System Team" . kgr:genecards.clinical.trials a schema1:Product ; rdfs:label "GeneCards Clinical Trials" ; dcterms:description "Clinical trial information from ClinicalTrials.gov" ; schema1:url . kgr:genecards.gene.ontology a schema1:Product ; rdfs:label "GeneCards Gene Ontology Annotations" ; dcterms:description "Gene ontology annotations from the Gene Ontology Consortium" ; schema1:url . kgr:genecards.literature a schema1:Product ; rdfs:label "GeneCards Literature References" ; dcterms:description "Literature references from PubMed automatically associated with genes" ; schema1:url . kgr:genecards.protein.structures a schema1:Product ; rdfs:label "GeneCards Protein Structure Data" ; dcterms:description "Protein structure data from PDB Europe and other structural databases" ; schema1:url . kgr:gnbr.graph a schema1:GraphProduct ; rdfs:label "GNBR graph" ; dcterms:description "Text-mined biomedical knowledge graph of gene–disease–drug relationships (semantic themes)" ; schema1:url . kgr:go.obo a schema1:OntologyProduct ; rdfs:label "GO (OBO Format edition)" ; dcterms:description "Equivalent to go.owl, in obo format" ; schema1:url . kgr:go.owl a schema1:OntologyProduct ; rdfs:label "GO (OWL edition)" ; dcterms:description "The main ontology in OWL. This is self contained and does not have connections to other OBO ontologies" ; schema1:url . kgr:goa.ftp a schema1:Product ; rdfs:label "GOA FTP Site" ; dcterms:description "FTP site containing current and archived GOA annotation files for all species" ; schema1:url . kgr:goa.proteomes a schema1:Product ; rdfs:label "Proteomes GOA Annotations" ; dcterms:description "GO annotations organized by proteomes" ; schema1:url . kgr:goa.quickgo a schema1:GraphicalInterface ; rdfs:label "QuickGO Browser" ; dcterms:description "Browser for searching and viewing Gene Ontology terms and GOA annotations" ; schema1:url . kgr:identifier-mappings.sparql a schema1:ProgrammingInterface ; rdfs:label "ID Mappings SPARQL" ; dcterms:description "SPARQL endpoint for ID Mappings" ; schema1:url . kgr:identifier-mappings.tpf a schema1:ProgrammingInterface ; rdfs:label "ID Mappings TPF" ; dcterms:description "Triple Pattern Fragments endpoint for ID Mappings" ; schema1:url . kgr:interpro.interpro2go a schema1:MappingProduct ; rdfs:label "InterPro to GO Mappings" ; dcterms:description "Mappings between InterPro entries and Gene Ontology (GO) terms" ; schema1:url . kgr:kg-microbe.graph.uniprot a schema1:GraphProduct ; rdfs:label "KG-Microbe UniProt microbe transform" ; dcterms:description "UniProt proteins from microbes, as graph nodes and edges" ; schema1:url . kgr:kg-monarch.phenio.semsql a schema1:Product ; rdfs:label "Phenio SQLite (SemSQL)" ; dcterms:description "Phenio SQLite database in SemSQL format for ontology queries" ; schema1:url . kgr:monarchinitiative a schema1:Aggregator, "Organization" ; rdfs:label "Monarch Initiative" ; dcterms:created "2025-10-30T00:00:00+00:00"^^xsd:dateTime ; dcterms:description "The Monarch Initiative is an international consortium that integrates, aligns, and redistributes cross-species gene, genotype, variant, disease, and phenotype data to improve understanding of genetic disease and support translational research." ; dcterms:identifier "monarchinitiative" ; dcterms:isReferencedBy ; dcterms:modified "2025-11-26T00:00:00+00:00"^^xsd:dateTime ; schema1:hasPart kgr:monarchinitiative.api, kgr:monarchinitiative.kg, kgr:monarchinitiative.portal ; schema1:identifier "monarchinitiative" ; schema1:name "Monarch Initiative" ; doap:repository ; skos:altLabel "Monarch", "The Monarch Initiative" ; skos:inScheme "biological systems", "genomics" ; adms:status "Active" ; foaf:homepage ; foaf:maker kgr:monarchinitiative . kgr:ncbigene.gene2ensembl a schema1:MappingProduct ; rdfs:label "Gene to Ensembl Mapping" ; dcterms:description "Gene to Ensembl mapping data providing cross-references between NCBI Gene and Ensembl gene identifiers" ; schema1:url . kgr:ncbigene.gene2go a schema1:MappingProduct ; rdfs:label "Gene to GO Mapping" ; dcterms:description "Gene to Gene Ontology mapping data providing functional annotations for genes" ; schema1:url . kgr:ncbigene.gene2pubmed a schema1:MappingProduct ; rdfs:label "Gene to PubMed Mapping" ; dcterms:description "Gene to PubMed mapping data providing literature references associated with genes" ; schema1:url . kgr:ncbigene.gene2refseq a schema1:MappingProduct ; rdfs:label "Gene to RefSeq Mapping" ; dcterms:description "Gene to RefSeq mapping data providing links between gene records and RefSeq sequence identifiers" ; schema1:url . kgr:ndfrt.rxnorm a schema1:Product ; rdfs:label "VANDF in RxNorm" ; dcterms:description "VANDF data integrated into RxNorm" ; schema1:url . kgr:ndfrt.umls a schema1:Product ; rdfs:label "VANDF in UMLS" ; dcterms:description "VANDF drug terminology data distributed through UMLS Metathesaurus" ; schema1:url . kgr:obo-db-ingest.bigg.compartment.json a schema1:Product ; rdfs:label "bigg.compartment OBO Graph JSON" ; dcterms:description "bigg.compartment OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.bigg.compartment.obo a schema1:Product ; rdfs:label "bigg.compartment OBO" ; dcterms:description "bigg.compartment OBO" ; schema1:url . kgr:obo-db-ingest.bigg.compartment.owl a schema1:Product ; rdfs:label "bigg.compartment OWL" ; dcterms:description "bigg.compartment OWL" ; schema1:url . kgr:obo-db-ingest.bigg.metabolite.json a schema1:Product ; rdfs:label "bigg.metabolite OBO Graph JSON" ; dcterms:description "bigg.metabolite OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.bigg.metabolite.obo a schema1:Product ; rdfs:label "bigg.metabolite OBO" ; dcterms:description "bigg.metabolite OBO" ; schema1:url . kgr:obo-db-ingest.bigg.metabolite.owl a schema1:Product ; rdfs:label "bigg.metabolite OWL" ; dcterms:description "bigg.metabolite OWL" ; schema1:url . kgr:obo-db-ingest.bigg.model.json a schema1:Product ; rdfs:label "bigg.model OBO Graph JSON" ; dcterms:description "bigg.model OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.bigg.model.obo a schema1:Product ; rdfs:label "bigg.model OBO" ; dcterms:description "bigg.model OBO" ; schema1:url . kgr:obo-db-ingest.bigg.model.owl a schema1:Product ; rdfs:label "bigg.model OWL" ; dcterms:description "bigg.model OWL" ; schema1:url . kgr:obo-db-ingest.bigg.reaction.json a schema1:Product ; rdfs:label "bigg.reaction OBO Graph JSON" ; dcterms:description "bigg.reaction OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.bigg.reaction.obo a schema1:Product ; rdfs:label "bigg.reaction OBO" ; dcterms:description "bigg.reaction OBO" ; schema1:url . kgr:obo-db-ingest.bigg.reaction.owl a schema1:Product ; rdfs:label "bigg.reaction OWL" ; dcterms:description "bigg.reaction OWL" ; schema1:url . kgr:obo-db-ingest.bigg.reaction.sssom.tsv a schema1:MappingProduct ; rdfs:label "bigg.reaction SSSOM" ; dcterms:description "bigg.reaction SSSOM" ; schema1:url . kgr:obo-db-ingest.ccle.json a schema1:Product ; rdfs:label "ccle OBO Graph JSON" ; dcterms:description "ccle OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.ccle.obo a schema1:Product ; rdfs:label "ccle OBO" ; dcterms:description "ccle OBO" ; schema1:url . kgr:obo-db-ingest.ccle.owl a schema1:Product ; rdfs:label "ccle OWL" ; dcterms:description "ccle OWL" ; schema1:url . kgr:obo-db-ingest.ccle.sssom.tsv a schema1:MappingProduct ; rdfs:label "ccle SSSOM" ; dcterms:description "ccle SSSOM" ; schema1:url . kgr:obo-db-ingest.cgnc.json a schema1:Product ; rdfs:label "cgnc OBO Graph JSON" ; dcterms:description "cgnc OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.cgnc.obo a schema1:Product ; rdfs:label "cgnc OBO" ; dcterms:description "cgnc OBO" ; schema1:url . kgr:obo-db-ingest.cgnc.owl a schema1:Product ; rdfs:label "cgnc OWL" ; dcterms:description "cgnc OWL" ; schema1:url . kgr:obo-db-ingest.cgnc.sssom.tsv a schema1:MappingProduct ; rdfs:label "cgnc SSSOM" ; dcterms:description "cgnc SSSOM" ; schema1:url . kgr:obo-db-ingest.hgnc.genegroup.json a schema1:Product ; rdfs:label "hgnc.genegroup OBO Graph JSON" ; dcterms:description "hgnc.genegroup OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.hgnc.genegroup.obo a schema1:Product ; rdfs:label "hgnc.genegroup OBO" ; dcterms:description "hgnc.genegroup OBO" ; schema1:url . kgr:obo-db-ingest.hgnc.genegroup.owl a schema1:Product ; rdfs:label "hgnc.genegroup OWL" ; dcterms:description "hgnc.genegroup OWL" ; schema1:url . kgr:obo-db-ingest.hgnc.json a schema1:Product ; rdfs:label "HGNC OBO Graph JSON" ; dcterms:description "HGNC OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.hgnc.obo a schema1:Product ; rdfs:label "HGNC OBO" ; dcterms:description "HGNC OBO" ; schema1:url . kgr:obo-db-ingest.hgnc.owl a schema1:Product ; rdfs:label "HGNC OWL" ; dcterms:description "HGNC OWL" ; schema1:url . kgr:obo-db-ingest.hgnc.sssom.tsv a schema1:MappingProduct ; rdfs:label "hgnc SSSOM" ; dcterms:description "hgnc SSSOM" ; schema1:url . kgr:obo-db-ingest.interpro.json a schema1:Product ; rdfs:label "interpro OBO Graph JSON" ; dcterms:description "interpro OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.interpro.obo a schema1:Product ; rdfs:label "interpro OBO" ; dcterms:description "interpro OBO" ; schema1:url . kgr:obo-db-ingest.interpro.owl a schema1:Product ; rdfs:label "interpro OWL" ; dcterms:description "interpro OWL" ; schema1:url . kgr:obo-db-ingest.itis.json a schema1:Product ; rdfs:label "ITIS OBO Graph JSON" ; dcterms:description "ITIS OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.itis.obo a schema1:Product ; rdfs:label "itis OBO" ; dcterms:description "itis OBO" ; schema1:url . kgr:obo-db-ingest.itis.owl a schema1:Product ; rdfs:label "ITIS OWL" ; dcterms:description "ITIS OWL" ; schema1:url . kgr:obo-db-ingest.kegg.genome.json a schema1:Product ; rdfs:label "kegg.genome OBO Graph JSON" ; dcterms:description "kegg.genome OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.kegg.genome.obo a schema1:Product ; rdfs:label "kegg.genome OBO" ; dcterms:description "kegg.genome OBO" ; schema1:url . kgr:obo-db-ingest.kegg.genome.owl a schema1:Product ; rdfs:label "kegg.genome OWL" ; dcterms:description "kegg.genome OWL" ; schema1:url . kgr:obo-db-ingest.pharmgkb.disease.json a schema1:Product ; rdfs:label "pharmgkb.disease OBO Graph JSON" ; dcterms:description "pharmgkb.disease OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pharmgkb.disease.obo a schema1:Product ; rdfs:label "pharmgkb.disease OBO" ; dcterms:description "pharmgkb.disease OBO" ; schema1:url . kgr:obo-db-ingest.pharmgkb.disease.owl a schema1:Product ; rdfs:label "pharmgkb.disease OWL" ; dcterms:description "pharmgkb.disease OWL" ; schema1:url . kgr:obo-db-ingest.pharmgkb.disease.sssom.tsv a schema1:MappingProduct ; rdfs:label "pharmgkb.disease SSSOM" ; dcterms:description "pharmgkb.disease SSSOM" ; schema1:url . kgr:obo-db-ingest.pharmgkb.drug.json a schema1:Product ; rdfs:label "pharmgkb.drug OBO Graph JSON" ; dcterms:description "pharmgkb.drug OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pharmgkb.drug.obo a schema1:Product ; rdfs:label "pharmgkb.drug OBO" ; dcterms:description "pharmgkb.drug OBO" ; schema1:url . kgr:obo-db-ingest.pharmgkb.drug.owl a schema1:Product ; rdfs:label "pharmgkb.drug OWL" ; dcterms:description "pharmgkb.drug OWL" ; schema1:url . kgr:obo-db-ingest.pharmgkb.drug.sssom.tsv a schema1:MappingProduct ; rdfs:label "pharmgkb.drug SSSOM" ; dcterms:description "pharmgkb.drug SSSOM" ; schema1:url . kgr:obo-db-ingest.pharmgkb.gene.json a schema1:Product ; rdfs:label "pharmgkb.gene OBO Graph JSON" ; dcterms:description "pharmgkb.gene OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pharmgkb.gene.obo a schema1:Product ; rdfs:label "pharmgkb.gene OBO" ; dcterms:description "pharmgkb.gene OBO" ; schema1:url . kgr:obo-db-ingest.pharmgkb.gene.owl a schema1:Product ; rdfs:label "pharmgkb.gene OWL" ; dcterms:description "pharmgkb.gene OWL" ; schema1:url . kgr:obo-db-ingest.pharmgkb.gene.sssom.tsv a schema1:MappingProduct ; rdfs:label "pharmgkb.gene SSSOM" ; dcterms:description "pharmgkb.gene SSSOM" ; schema1:url . kgr:obo-db-ingest.pharmgkb.pathways.json a schema1:Product ; rdfs:label "pharmgkb.pathways OBO Graph JSON" ; dcterms:description "pharmgkb.pathways OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pharmgkb.pathways.obo a schema1:Product ; rdfs:label "pharmgkb.pathways OBO" ; dcterms:description "pharmgkb.pathways OBO" ; schema1:url . kgr:obo-db-ingest.pharmgkb.pathways.owl a schema1:Product ; rdfs:label "pharmgkb.pathways OWL" ; dcterms:description "pharmgkb.pathways OWL" ; schema1:url . kgr:obo-db-ingest.pharmgkb.variant.json a schema1:Product ; rdfs:label "pharmgkb.variant OBO Graph JSON" ; dcterms:description "pharmgkb.variant OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.pharmgkb.variant.obo a schema1:Product ; rdfs:label "pharmgkb.variant OBO" ; dcterms:description "pharmgkb.variant OBO" ; schema1:url . kgr:obo-db-ingest.pharmgkb.variant.owl a schema1:Product ; rdfs:label "pharmgkb.variant OWL" ; dcterms:description "pharmgkb.variant OWL" ; schema1:url . kgr:obo-db-ingest.pharmgkb.variant.sssom.tsv a schema1:MappingProduct ; rdfs:label "pharmgkb.variant SSSOM" ; dcterms:description "pharmgkb.variant SSSOM" ; schema1:url . kgr:obo-db-ingest.rhea.json a schema1:Product ; rdfs:label "rhea OBO Graph JSON" ; dcterms:description "rhea OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.rhea.obo a schema1:Product ; rdfs:label "rhea OBO" ; dcterms:description "rhea OBO" ; schema1:url . kgr:obo-db-ingest.rhea.owl a schema1:Product ; rdfs:label "rhea OWL" ; dcterms:description "rhea OWL" ; schema1:url . kgr:obo-db-ingest.zfin.json a schema1:Product ; rdfs:label "zfin OBO Graph JSON" ; dcterms:description "zfin OBO Graph JSON" ; schema1:url . kgr:obo-db-ingest.zfin.obo a schema1:Product ; rdfs:label "zfin OBO" ; dcterms:description "zfin OBO" ; schema1:url . kgr:obo-db-ingest.zfin.owl a schema1:Product ; rdfs:label "zfin OWL" ; dcterms:description "zfin OWL" ; schema1:url . kgr:obo-db-ingest.zfin.sssom.tsv a schema1:MappingProduct ; rdfs:label "zfin SSSOM" ; dcterms:description "zfin SSSOM" ; schema1:url . kgr:oma.mapping.uniprot a schema1:MappingProduct ; rdfs:label "OMA to UniProt Mapping" ; dcterms:description "Mapping of OMA identifiers to UniProt accession numbers" ; schema1:url . kgr:omnicorp.api a schema1:ProgrammingInterface ; rdfs:label "OmniCorp API" ; dcterms:description "API access to OmniCorp co-occurrence data" ; schema1:url . kgr:omnicorp.cooccurrence a schema1:Product ; rdfs:label "OmniCorp Co-occurrence Data" ; dcterms:description "Co-occurrence data from PubMed abstracts" ; schema1:url . kgr:petagraph.graph a schema1:GraphProduct ; rdfs:label "Petagraph Knowledge Graph (Neo4J)" ; dcterms:description "A comprehensive multi-omics biomedical knowledge graph connecting genomic, transcriptomic, proteomic, and clinical data. Contains over 32 million nodes and 118 million relationships." ; schema1:url . kgr:pombase.genes-products a schema1:Product ; rdfs:label "PomBase gene names and products" ; dcterms:description "Tab-delimited file of systematic ID, primary gene name (where assigned), chromosome, product description, UniProtKB accession, all synonyms, and product type (protein coding, ncRNA, etc.) for each gene" ; schema1:url . kgr:pombase.to-uniprot a schema1:MappingProduct ; rdfs:label "PomBase to UniProt map" ; dcterms:description "Tab-delimited file with the PomBase systematic identifier for each protein-coding gene mapped to the corresponding UniProt accession number" ; schema1:url . kgr:ribocentre.search a schema1:GraphicalInterface ; rdfs:label "Sequence Search" ; dcterms:description "Search functionality integrated with RNAcentral for sequence searching" ; schema1:url . kgr:scibite.hgnc a schema1:Product ; rdfs:label "SciBite HGNC" ; dcterms:description "This HGNC OWL file is generated from the data at https://www.genenames.org/. It contains all genes in HGNC organised in a shallow hierarchy, classified by their locus type and gene group. Gene groups are also derived from HGNC. The ontology contains approved gene symbol, approved gene name, previous names and symbols and mappings to external databases." ; schema1:url . kgr:snomedct.icd10cm.map a schema1:MappingProduct ; rdfs:label "SNOMED CT to ICD-10-CM Map" ; dcterms:description "The biannual release of the SNOMED CT to ICD-10-CM Map, which maps SNOMED CT concepts to ICD-10-CM codes." ; schema1:url . kgr:swisslipid.evidences a schema1:Product ; rdfs:label "SwissLipids Evidences" ; dcterms:description "TSV export of evidence annotations including ECO terms and supporting PMIDs." ; schema1:url . kgr:swisslipid.go a schema1:Product ; rdfs:label "SwissLipids GO Annotations" ; dcterms:description "TSV export of SwissLipids links to Gene Ontology terms with taxon context." ; schema1:url . kgr:swisslipid.lipids2uniprot a schema1:MappingProduct ; rdfs:label "SwissLipids Lipids to UniProt" ; dcterms:description "TSV mapping between SwissLipids lipid entries and UniProtKB proteins." ; schema1:url . kgr:translator.alliance.graph a schema1:GraphProduct ; rdfs:label "Translator Alliance KGX Graph" ; dcterms:description "KGX graph package for Alliance of Genome Resources (build alliance_8.2.0_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.bgee.graph a schema1:GraphProduct ; rdfs:label "Translator Bgee KGX Graph" ; dcterms:description "KGX graph package for Bgee expression data (build bgee_15.2_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.chembl.graph a schema1:GraphProduct ; rdfs:label "Translator ChEMBL KGX Graph" ; dcterms:description "KGX graph package for ChEMBL (build chembl_36_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.cohd.graph a schema1:GraphProduct ; rdfs:label "Translator COHD KGX Graph" ; dcterms:description "KGX graph package for Columbia Open Health Data (build cohd_2024-11-25_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.ctd.graph a schema1:GraphProduct ; rdfs:label "Translator CTD KGX Graph" ; dcterms:description "KGX graph package for Comparative Toxicogenomics Database (build ctd_November_2025_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.ctkp.graph a schema1:GraphProduct ; rdfs:label "Translator CTKP KGX Graph" ; dcterms:description "KGX graph package for Clinical Trials Knowledge Provider (build ctkp_3.1.23_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.dakp.graph a schema1:GraphProduct ; rdfs:label "Translator DAKP KGX Graph" ; dcterms:description "KGX graph package for DrugCentral Annotation KP (build dakp_0.4.3_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.dgidb.graph a schema1:GraphProduct ; rdfs:label "Translator DGIdb KGX Graph" ; dcterms:description "KGX graph package for DGIdb drug–gene interactions (build dgidb_2024_12_06_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.diseases.graph a schema1:GraphProduct ; rdfs:label "Translator DISEASES KGX Graph" ; dcterms:description "KGX graph package for DISEASES text-mined associations (build diseases_2025_12_07_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.drug_rep_hub.graph a schema1:GraphProduct ; rdfs:label "Translator Drug Repurposing Hub KGX Graph" ; dcterms:description "KGX graph package for Drug Repurposing Hub (build drug_rep_hub_2025-08-19_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.gene2phenotype.graph a schema1:GraphProduct ; rdfs:label "Translator Gene2Phenotype KGX Graph" ; dcterms:description "KGX graph package for Gene2Phenotype (build gene2phenotype_2025_12_15_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.geneticskp.graph a schema1:GraphProduct ; rdfs:label "Translator Genetics KP KGX Graph" ; dcterms:description "KGX graph package for Genetics KP (build geneticskp_2025-12-15_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.go_cam.graph a schema1:GraphProduct ; rdfs:label "Translator GO-CAM KGX Graph" ; dcterms:description "KGX graph package for GO-CAM models (build go_cam_2025-10-10_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.goa.graph a schema1:GraphProduct ; rdfs:label "Translator GOA KGX Graph" ; dcterms:description "KGX graph package for Gene Ontology Annotations (build goa_2025-10-10_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.gtopdb.graph a schema1:GraphProduct ; rdfs:label "Translator GToPdb KGX Graph" ; dcterms:description "KGX graph package for Guide to Pharmacology (build gtopdb_20251215_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.hpoa.graph a schema1:GraphProduct ; rdfs:label "Translator HPOA KGX Graph" ; dcterms:description "KGX graph package for Human Phenotype Ontology annotations (build hpoa_2025-11-24_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.icees.graph a schema1:GraphProduct ; rdfs:label "Translator ICEES KGX Graph" ; dcterms:description "KGX graph package for ICEES cohort data (build icees_2024-08-20_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.intact.graph a schema1:GraphProduct ; rdfs:label "Translator IntAct KGX Graph" ; dcterms:description "KGX graph package for IntAct molecular interactions (build intact_2025_08_28_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.panther.graph a schema1:GraphProduct ; rdfs:label "Translator PANTHER KGX Graph" ; dcterms:description "KGX graph package for PANTHER pathways (build panther_19.0_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.semmeddb.graph a schema1:GraphProduct ; rdfs:label "Translator SemMedDB KGX Graph" ; dcterms:description "KGX graph package for SemMedDB text-derived predications (build semmeddb_semmeddb-2023-kg2.10.3_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.sider.graph a schema1:GraphProduct ; rdfs:label "Translator SIDER KGX Graph" ; dcterms:description "KGX graph package for SIDER drug side effects (build sider_4.1_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.signor.graph a schema1:GraphProduct ; rdfs:label "Translator SIGNOR KGX Graph" ; dcterms:description "KGX graph package for SIGNOR causal interactions (build signor_2025_Oct_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.tmkp.graph a schema1:GraphProduct ; rdfs:label "Translator TMKP KGX Graph" ; dcterms:description "KGX graph package for Text Mining KP (build tmkp_tmkp-2023-03-05_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.ttd.graph a schema1:GraphProduct ; rdfs:label "Translator TTD KGX Graph" ; dcterms:description "KGX graph package for Therapeutic Target Database (build ttd_2024_03_30_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:translator.ubergraph.graph a schema1:GraphProduct ; rdfs:label "Translator Ubergraph KGX Graph" ; dcterms:description "KGX graph package for Ubergraph ontology integration (build ubergraph_2025-11-02_1.0_2025sep1_4.3.6; release 2025_12_15)" ; schema1:url . kgr:ttd.kegg-pathways a schema1:Product ; rdfs:label "Target KEGG Pathways" ; dcterms:description "KEGG pathway data for all targets" ; schema1:url . kgr:ttd.uniprot-all a schema1:Product ; rdfs:label "All Target UniProt IDs" ; dcterms:description "UniProt IDs for all targets in TTD" ; schema1:url . kgr:ttd.wiki-pathways a schema1:Product ; rdfs:label "Target WikiPathways" ; dcterms:description "WikiPathways data for all targets" ; schema1:url . kgr:unibiomap.go_desc a schema1:GraphProduct ; rdfs:label "UniBioMap GO Descriptions" ; dcterms:description "UniBioMap Gene Ontology entity descriptions." ; schema1:url . kgr:amyco.annotations a schema1:Product ; rdfs:label "AmyCo Curated Annotations" ; dcterms:description "Manually curated disease-gene associations and annotations for amyloidoses and amyloid deposition-related diseases extracted from biomedical literature." . kgr:clo.owl a schema1:OntologyProduct ; rdfs:label "clo.owl" ; dcterms:description "Cell Line Ontology in OWL format" ; schema1:url . kgr:cpathkg.code a schema1:ProcessProduct ; rdfs:label "C-Path Knowledge Graph Integration" ; dcterms:description "This repository is a code reference for the C-Path Knowledge Graph project, to increase discoverability of rare disease datasets through integration with the Monarch Knowlege Graph. Note that this is only a reference to scripts and queries associated with this project and is not provided as a runnable project because these workflows depend on an internal data catalog." ; schema1:url . kgr:edam.csv a schema1:OntologyProduct ; rdfs:label "EDAM CSV" ; dcterms:description "EDAM CSV export" ; schema1:url . kgr:edam.owl a schema1:OntologyProduct ; rdfs:label "EDAM OWL" ; dcterms:description "EDAM OWL release" ; schema1:url . kgr:edam.tsv a schema1:OntologyProduct ; rdfs:label "EDAM TSV" ; dcterms:description "EDAM TSV export" ; schema1:url . kgr:genecards.pathway.data a schema1:Product ; rdfs:label "GeneCards Pathway Data" ; dcterms:description "Pathway information integrated from Reactome, WikiPathways and other pathway databases" ; schema1:url . kgr:genecards.pharmacogenomics a schema1:Product ; rdfs:label "GeneCards Pharmacogenomics Data" ; dcterms:description "Pharmacogenomics data from PharmGKB, DrugBank and other pharmacogenomics sources" ; schema1:url . kgr:goa.human a schema1:Product ; rdfs:label "Human GOA Annotations" ; dcterms:description "GO annotations for human proteins" ; schema1:url . kgr:goa.mouse a schema1:Product ; rdfs:label "Mouse GOA Annotations" ; dcterms:description "GO annotations for mouse proteins" ; schema1:url . kgr:goa.pdb a schema1:Product ; rdfs:label "PDB GOA Annotations" ; dcterms:description "GO annotations for PDB entries" ; schema1:url . kgr:goa.uniprot a schema1:Product ; rdfs:label "UniProt GOA Annotations" ; dcterms:description "GO annotations for all UniProtKB entries" ; schema1:url . kgr:mgmlink.code a schema1:ProcessProduct ; rdfs:label "MGMLink code" ; dcterms:description "Code for generating MGMLink" ; schema1:url . kgr:mind.entities a schema1:Product ; rdfs:label "MIND Entities Dictionary" ; dcterms:description "Dictionary of entities in the MIND knowledge graph" ; schema1:url . kgr:mind.relations a schema1:Product ; rdfs:label "MIND Relations Dictionary" ; dcterms:description "Dictionary of relations in the MIND knowledge graph" ; schema1:url . kgr:mind.test a schema1:GraphProduct ; rdfs:label "MIND Test Data" ; dcterms:description "Test data for the MIND knowledge graph containing DrugCentral indications" ; schema1:url . kgr:mind.train a schema1:GraphProduct ; rdfs:label "MIND Training Data" ; dcterms:description "Training data for the MIND knowledge graph containing 9,651,040 edges" ; schema1:url . kgr:mind.valid a schema1:GraphProduct ; rdfs:label "MIND Validation Data" ; dcterms:description "Validation data for the MIND knowledge graph containing DrugCentral indications" ; schema1:url . kgr:ncbigene.gene_refseq_uniprotkb_collab a schema1:MappingProduct ; rdfs:label "Gene RefSeq UniProtKB Collaboration Data" ; dcterms:description "Gene to RefSeq/UniProtKB collaboration data providing cross-references between gene records and protein databases" ; schema1:url . kgr:ncbigene.mim2gene_medgen a schema1:MappingProduct ; rdfs:label "MIM to Gene MedGen Mapping" ; dcterms:description "MIM to Gene and MedGen mapping data connecting genetic disorders to genes" ; schema1:url . kgr:obo-db-ingest.bigg.compartment.sssom.tsv a schema1:MappingProduct ; rdfs:label "bigg.compartment SSSOM" ; dcterms:description "bigg.compartment SSSOM" ; schema1:url . kgr:repodb.full_dataset a schema1:Product ; rdfs:label "RepoDB Full Dataset" ; dcterms:description "Complete RepoDB dataset containing drug repositioning successes and failures, with approved drugs, indications, and clinical trial outcomes" ; schema1:url . kgr:swisslipid.enzymes a schema1:Product ; rdfs:label "SwissLipids Enzymes" ; dcterms:description "TSV export of lipid-related enzymes with UniProt, Rhea, and evidence links." ; schema1:url . kgr:genecards.expression.data a schema1:Product ; rdfs:label "GeneCards Expression Data" ; dcterms:description "Gene expression data aggregated from GTEx, BioGPS, Bgee and other expression databases" ; schema1:url . kgr:genecards.model.organisms a schema1:Product ; rdfs:label "GeneCards Model Organism Data" ; dcterms:description "Model organism data from FlyBase, SGD, ZFIN and other model organism databases" ; schema1:url . kgr:genecards.protein.interactions a schema1:Product ; rdfs:label "GeneCards Protein Interactions" ; dcterms:description "Protein interaction data aggregated from IntAct, STRING, BioGRID and other interaction databases" ; schema1:url . kgr:genecards.variant.data a schema1:Product ; rdfs:label "GeneCards Variant Data" ; dcterms:description "Genetic variant data from ClinVar, dbSNP, GWAS Catalog and other variant databases" ; schema1:url . kgr:goa.mapping-files a schema1:MappingProduct ; rdfs:label "GO Mapping Files" ; dcterms:description "Files containing transitive assignments of InterPro matches, UniProtKB keywords, subcellular locations, EC numbers, or HAMAP matches to manually-selected GO terms" ; schema1:url . kgr:mondo.sssom a schema1:MappingProduct ; rdfs:label "MONDO SSSOM" ; dcterms:description "MONDO SSSOM. Mappings from MONDO identifiers to other namespaces." ; schema1:url . kgr:omim.mim2gene a schema1:MappingProduct ; rdfs:label "OMIM mim2gene.txt" ; dcterms:description "Public mapping of MIM numbers to NCBI Gene IDs, Ensembl Gene IDs, and HGNC symbols" ; schema1:url . kgr:drug-approvals-kp.graph.edges a schema1:GraphProduct ; rdfs:label "Drug Approvals KP Graph Edges" ; dcterms:description "Edges for the Drug Approvals KP, v0.3.9" ; schema1:url . kgr:drug-approvals-kp.graph.nodes a schema1:GraphProduct ; rdfs:label "Drug Approvals KP Graph Nodes" ; dcterms:description "Nodes for the Drug Approvals KP, v0.3.9" ; schema1:url . kgr:emikg.kg a schema1:GraphProduct ; rdfs:label "EMI Knowledge Graph" ; dcterms:description "Graph version of the Earth Metabolome Initiative Ontology" ; schema1:url . kgr:emikg.sparql a schema1:ProgrammingInterface ; rdfs:label "EMI KG SPARQL Endpoint" ; dcterms:description "SPARQL endpoint for programmatic access to the EMI Knowledge Graph" ; schema1:url . kgr:emikg.web a schema1:GraphicalInterface ; rdfs:label "EMI KG SPARQL Query Editor" ; dcterms:description "Web-based SPARQL query editor for the EMI Knowledge Graph" ; schema1:url . kgr:openbiodiv.ontology.ttl a schema1:OntologyProduct ; rdfs:label "OpenBioDiv-O" ; dcterms:description "OpenBioDiv-O, the OpenBiodiv Ontology" ; schema1:url . kgr:rampdb.database a schema1:DatabaseProduct ; rdfs:label "RaMP-DB Integrated Database" ; dcterms:description "Multi-sourced relational database integrating metabolomic pathway information, biochemical reactions, ontologies, and chemical descriptors for genes, proteins, and metabolites with query and enrichment analysis capabilities." ; schema1:url . kgr:biogrid.identifiers a schema1:MappingProduct ; rdfs:label "BIOGRID-IDENTIFIERS-LATEST.tab.zip" ; dcterms:description "A single delimited text file format containing a list of mappings between different identifiers stored in BioGRID and the identifiers used in downloads." ; schema1:url . kgr:genecards.disease.associations a schema1:Product ; rdfs:label "GeneCards Disease Associations" ; dcterms:description "Disease association data integrated from OMIM, MalaCards, ClinVar, Orphanet, DisGeNET and other disease databases" ; schema1:url . kgr:obo-db-ingest.bigg.metabolite.sssom.tsv a schema1:MappingProduct ; rdfs:label "bigg.metabolite SSSOM" ; dcterms:description "bigg.metabolite SSSOM" ; schema1:url . kgr:proteomehd.data a schema1:GraphProduct ; rdfs:label "ProteomeHD Data" ; dcterms:description "ProteomeHD data files" ; schema1:url . kgr:genecards.gene.annotations a schema1:Product ; rdfs:label "GeneCards Gene Annotations" ; dcterms:description "Integrated gene annotation data aggregated from HGNC, OMIM, Ensembl, NCBI Gene, UniProt and other genomic databases" ; schema1:url . kgr:irefindex.database a schema1:Product ; rdfs:label "iRefIndex Database" ; dcterms:description "Historical consolidated protein interaction index in PSI-MITAB 2.5 format aggregating data from BIND, BioGrid, DIP, HPRD, IntAct, MINT, MPact, MPPI and OPHID" . kgr:obo-db-ingest.rhea.sssom.tsv a schema1:MappingProduct ; rdfs:label "Rhea SSSOM" ; dcterms:description "Rhea SSSOM" ; schema1:url . kgr:sib a "Organization" ; rdfs:label "Bgee Team - SIB Swiss Institute of Bioinformatics", "CALIPHO Group - SIB Swiss Institute of Bioinformatics", "Evgeny Zdobnov Lab - SIB Swiss Institute of Bioinformatics", "GlyConnect Team - SIB Swiss Institute of Bioinformatics", "MetaNetX Team - SIB Swiss Institute of Bioinformatics", "OMA Team - SIB Swiss Institute of Bioinformatics", "SIBiLS - Swiss Institute of Bioinformatics Literature Services" . kgr:athena.mappings a schema1:MappingProduct ; rdfs:label "Athena Concept Mappings" ; dcterms:description "Concept mappings between different terminology systems" ; schema1:url . kgr:chr.model.owl a schema1:OntologyProduct ; rdfs:label "Monochrom Ontology OWL release" ; dcterms:description "OWL release of Monochrom Ontology" ; schema1:url . kgr:broad a "Organization" ; rdfs:label "Broad Institute", "Broad Institute Center for the Science of Therapeutics", "Broad Institute LINCS Transcriptomics Center", "Broad Institute Translator Team", "Broad Institute of MIT and Harvard", "DepMap Team, Broad Institute", "Project Achilles, Broad Institute" . kgr:icees-kg.graph a schema1:GraphProduct ; rdfs:label "KGX distribution of the ICEES Exposures KP" ; dcterms:description "KGX distribution of the ICEES Exposures KP in Knowledge Graph Exchange (KGX) format, containing integrated clinical and environmental exposures data as a knowledge graph with 226 nodes and 14,342 edges" ; schema1:url . kgr:icees-kg.metadata a schema1:Product ; rdfs:label "ICEES KG Metadata" ; dcterms:description "Meta knowledge graph and metadata describing the data sources, node types, edge types, and predicates available in ICEES KG" ; schema1:url . kgr:icees-kg.trapi a schema1:ProgrammingInterface ; rdfs:label "ICEES KG TRAPI API" ; dcterms:description "Translator Reasoner API (TRAPI) endpoint for querying ICEES KG using standardized Translator protocols" ; schema1:url . kgr:aop-db.data a schema1:Product ; rdfs:label "AOP-DB Data" ; dcterms:description "The EPA has developed the Adverse Outcome Pathway Database (AOP-DB) to better characterize adverse outcomes of toxicological interest that are relevant to human health and the environment. Since its inception, the AOP-DB has been developed with the aim of integrating AOP molecular target information with other publicly available datasets to facilitate computational analyses of AOP information." ; schema1:url . kgr:forum.graph.dump a schema1:GraphProduct ; rdfs:label "FORUM Knowledge Graph Dump" ; dcterms:description "Downloadable knowledge graph dump in TAR/GZ format containing complete FORUM data" ; schema1:url . kgr:kinace.portal a schema1:GraphicalInterface ; rdfs:label "KinAce Web Portal" ; dcterms:description "Interactive web interface for exploring and visualizing kinase-substrate interactions" ; schema1:url . kgr:drugmechdb.graph a schema1:GraphProduct ; rdfs:label "DrugMechDB Graph Dataset" ; dcterms:description "Curated mechanistic drug–disease paths comprising the DrugMechDB dataset packaged as a downloadable archive." ; schema1:url . kgr:pharmkg.graph a schema1:GraphProduct ; rdfs:label "PharmKG graph" ; dcterms:description "Cleaned benchmark graph (PharmKG-8k) with typed relations between genes, chemicals, and diseases" ; schema1:url . kgr:disgenet.data a schema1:GraphProduct ; rdfs:label "DisGeNET Data" ; dcterms:description "DisGeNET data, including gene to disease associations and variant to disease associations (requires registration and subscription)." ; schema1:url . kgr:indra.cogex.code a schema1:ProcessProduct ; rdfs:label "INDRA CoGEx Build Code" ; dcterms:description "INDRA CoGEx is a graph database integrating causal relations, ontological relations, properties, and data, assembled at scale automatically from the scientific literature and structured sources. This is the code to build the graph." ; schema1:url . kgr:kg-microbe.graph.biomedical a schema1:GraphProduct ; rdfs:label "KG-Microbe KGX Graph - Biomedical" ; dcterms:description "Core plus human biomedical data (ontologies, CTD, Wallen et al)" ; schema1:url . kgr:kg-microbe.graph.biomedical-function a schema1:GraphProduct ; rdfs:label "KG-Microbe KGX Graph - Biomedical-Function" ; dcterms:description "Biomedical plus Uniprot genome annotations" ; schema1:url . kgr:kg-microbe.graph.core a schema1:GraphProduct ; rdfs:label "KG-Microbe KGX Graph - Core" ; dcterms:description "The core KG KG-Microbe-Core with ontologies, organismal traits, and growth preferences." ; schema1:url . kgr:kg-microbe.graph.function a schema1:GraphProduct ; rdfs:label "KG-Microbe KGX Graph - Function" ; dcterms:description "Core plus Uniprot genome annotations" ; schema1:url . kgr:kg-microbe.graph.raw a schema1:GraphProduct ; rdfs:label "KG-Microbe KGX Graph - Raw" ; dcterms:description "Raw source files for all KG-Microbe framework transforms (all 4 KGs)" ; schema1:url . kgr:epigraphdb.graph a schema1:GraphProduct ; rdfs:label "EpiGraphDB Graph Database" ; dcterms:description "Integrated graph knowledge base combining Mendelian randomization causal estimates, pathway, QTL, drug, literature-derived, and ontology-backed relationships (Neo4j backend)" ; schema1:url . kgr:ibkh.graph a schema1:GraphProduct ; rdfs:label "iBKH Knowledge Graph" ; dcterms:description "The integrative Biomedical Knowledge Hub (iBKH) knowledge graph, harmonizing and integrating information from diverse biomedical resources including DRKG, iDISK, and multiple databases (BRENDA, CTD, DrugBank, KEGG, PharmGKB, Reactome, SIDER, and others)." . kgr:kg-monarch.graph a schema1:GraphProduct ; rdfs:label "KGX Distribution of KG-Monarch" ; dcterms:description "KGX Distribution of KG-Monarch" ; schema1:url . kgr:kg-monarch.graph.duckdb a schema1:GraphProduct ; rdfs:label "DuckDB database of KG-Monarch" ; dcterms:description "DuckDB database of KG-Monarch" ; schema1:url . kgr:kg-monarch.graph.jsonl a schema1:GraphProduct ; rdfs:label "KGX JSON-L Distribution of KG-Monarch" ; dcterms:description "KGX JSON-Lines Distribution of KG-Monarch" ; schema1:url . kgr:kg-monarch.graph.jsonl.edges a schema1:GraphProduct ; rdfs:label "KGX JSON-L Distribution of KG-Monarch Edges" ; dcterms:description "KGX JSON-Lines Distribution of KG-Monarch (Edges)" ; schema1:url . kgr:kg-monarch.graph.jsonl.nodes a schema1:GraphProduct ; rdfs:label "KGX JSON-L Distribution of KG-Monarch Nodes" ; dcterms:description "KGX JSON-Lines Distribution of KG-Monarch (Nodes)" ; schema1:url . kgr:kg-monarch.graph.neo4j a schema1:GraphProduct ; rdfs:label "Neo4j Dump of KG-Monarch" ; dcterms:description "Neo4j Dump of KG-Monarch" ; schema1:url . kgr:kg-monarch.graph.neo4j.edges a schema1:GraphProduct ; rdfs:label "Neo4j Dump of KG-Monarch Edges" ; dcterms:description "Neo4j Dump of KG-Monarch Edges" ; schema1:url . kgr:kg-monarch.graph.neo4j.nodes a schema1:GraphProduct ; rdfs:label "Neo4j Dump of KG-Monarch Nodes" ; dcterms:description "Neo4j Dump of KG-Monarch Nodes" ; schema1:url . kgr:kg-monarch.graph.rdf a schema1:GraphProduct ; rdfs:label "RDF Distribution of KG-Monarch" ; dcterms:description "RDF Distribution of KG-Monarch" ; schema1:url . kgr:mechreponet.kg rdfs:label "MechRepoNet Knowledge Graph" ; dcterms:description "The MechRepoNet knowledge graph in its original format" ; schema1:url . kgr:ncbi a "Organization" ; rdfs:label "ClinVar Team, National Center for Biotechnology Information (NCBI)", "NCBI", "NCBI Computational Biology Branch", "NCBI Gene Database", "NCBI Help Desk", "NCBI PubMed Help Desk", "NLM UMLS Customer Support", "National Center for Biotechnology Information (NCBI)", "National Library of Medicine", "National Library of Medicine (NLM)", "National Library of Medicine Clinical Trials Team", "US National Library of Medicine" . kgr:rna-kg.kg.edges a schema1:GraphProduct ; rdfs:label "RNA-KG Edges" ; dcterms:description "RNA-KG Edges in CSV format" ; schema1:url . kgr:rna-kg.kg.neo4j a schema1:GraphProduct ; rdfs:label "RNA-KG Neo4j Dump" ; dcterms:description "RNA-KG as a Neo4j Dump" ; schema1:url . kgr:rna-kg.kg.nodes a schema1:GraphProduct ; rdfs:label "RNA-KG Nodes" ; dcterms:description "RNA-KG Nodes in CSV format" ; schema1:url . kgr:rtx-kg2.graph.edges a schema1:GraphProduct ; rdfs:label "RTX-KG2.10.1c KGX JSONL Edges" ; dcterms:description "Edges for KGX distribution of the RTX-KG2 (RTX-KG2.10.1c)" ; schema1:url . kgr:rtx-kg2.graph.nodes a schema1:GraphProduct ; rdfs:label "RTX-KG2.10.1c KGX JSONL Nodes" ; dcterms:description "Nodes for KGX distribution of the RTX-KG2 (RTX-KG2.10.1c)" ; schema1:url . kgr:rtx-kg2.neo4j a schema1:ProgrammingInterface ; rdfs:label "RTX-KG2 Neo4j" ; dcterms:description "Neo4j distribution of the RTX-KG2 as a graph database" ; schema1:url . kgr:ebi a "Organization" ; rdfs:label "ChEMBL", "ChEMBL Team at EMBL-EBI", "EMBL-EBI", "EMBL-EBI Samples, Phenotypes and Ontologies Team", "EMBL-EBI Samples, Phenotypes and Ontologies Team (SPOT)", "Ensembl Help Desk", "European Bioinformatics Institute (EMBL-EBI)", "GOA Team at EMBL-EBI", "IntAct Team (EMBL-EBI)", "InterPro", "International Genome Sample Resource (EMBL-EBI)", "NHGRI-EBI GWAS Catalog Team", "RNAcentral Consortium (EMBL-EBI)", "Rfam Team at EMBL-EBI", "UniProt Consortium" . kgr:microbiomekg.api a schema1:ProgrammingInterface ; rdfs:label "MicrobiomeKG Plover API" ; dcterms:description "TRAPI web API for querying MicrobiomeKG" ; schema1:url . kgr:alzkb.browser a schema1:GraphicalInterface ; rdfs:label "AlzKB Graph Database Browser" ; dcterms:description "A browser interface for a knowledge graph for Alzheimer's Disease." ; schema1:url . kgr:alzkb.data a schema1:GraphProduct ; rdfs:label "AlzKB Data Release (Version 2.0.0)" ; dcterms:description "Memgraph data release for AlzKB." ; schema1:url . kgr:pheknowlator.graph a schema1:GraphProduct ; rdfs:label "PheKnowLator graph" ; dcterms:description "PheKnowLator graph files, including subsets with and without inverse relations." ; schema1:url . kgr:string.cog.links a schema1:GraphProduct ; rdfs:label "STRING COG Links" ; dcterms:description "association scores between orthologous groups" ; schema1:url . kgr:string.cog.links.detailed a schema1:GraphProduct ; rdfs:label "STRING COG Links Detailed" ; dcterms:description "association scores (incl. subscores per channel)" ; schema1:url . kgr:string.database a schema1:GraphProduct ; rdfs:label "STRING Database Network Schema" ; dcterms:description "full database, part II: the networks (nodes, edges, scores,...)" ; schema1:url . kgr:string.protein.links a schema1:GraphProduct ; rdfs:label "STRING Protein Links" ; dcterms:description "protein network data (full network, scored links between proteins)" ; schema1:url . kgr:string.protein.links.detailed a schema1:GraphProduct ; rdfs:label "STRING Protein Links Detailed" ; dcterms:description "protein network data (full network, incl. subscores per channel)" ; schema1:url . kgr:string.protein.links.full a schema1:GraphProduct ; rdfs:label "STRING Protein Links Full" ; dcterms:description "protein network data (full network, incl. distinction: direct vs. interologs)" ; schema1:url . kgr:string.protein.physical.links a schema1:GraphProduct ; rdfs:label "STRING Protein Physical Links" ; dcterms:description "protein network data (physical subnetwork, scored links between proteins)" ; schema1:url . kgr:string.protein.physical.links.detailed a schema1:GraphProduct ; rdfs:label "STRING Protein Physical Links Detailed" ; dcterms:description "protein network data (physical subnetwork, incl. subscores per channel)" ; schema1:url . kgr:string.protein.physical.links.full a schema1:GraphProduct ; rdfs:label "STRING Protein Physical Links Full" ; dcterms:description "protein network data (physical subnetwork, incl. distinction: direct vs. interologs)" ; schema1:url . kgr:unibiomap.auxs a schema1:GraphProduct ; rdfs:label "UniBioMap Graph Auxiliaries" ; dcterms:description "Auxiliary UniBioMap graph annotations and metadata." ; schema1:url . kgr:unibiomap.links a schema1:GraphProduct ; rdfs:label "UniBioMap Graph Links" ; dcterms:description "Core UniBioMap graph edges file." ; schema1:url . kgr:unibiomap.pred a schema1:GraphProduct ; rdfs:label "UniBioMap Predicted Graph" ; dcterms:description "Predicted UniBioMap graph edges with confidence scores." ; schema1:url . kgr:unibiomap.pred.full a schema1:GraphProduct ; rdfs:label "UniBioMap Predicted Graph (Full)" ; dcterms:description "Full unfiltered UniBioMap predicted graph edges file." ; schema1:url . kgr:cancer-genome-interpreter.clinicalkg.graph a schema1:GraphProduct ; rdfs:label "CKG Graph Dump" ; dcterms:description "Neo4j database dump of the Clinical Knowledge Graph and additional relationships" ; schema1:url . kgr:clinicalkg.graph a schema1:GraphProduct ; rdfs:label "CKG Graph Dump" ; dcterms:description "Neo4j database dump of the Clinical Knowledge Graph and additional relationships" ; schema1:url . kgr:spoke.graph a schema1:GraphProduct ; rdfs:label "SPOKE Graph" ; dcterms:description "The SPOKE knowledge graph containing nodes and edges from multiple biomedical data sources." . kgr:bioteque.embeddings a schema1:Product ; rdfs:label "Bioteque Embeddings" ; dcterms:description "Network embeddings of the Bioteque graph that represent biological entities and their associations" ; schema1:url . kgr:efo.obo a schema1:OntologyProduct ; rdfs:label "EFO OBO" ; dcterms:description "The latest release of EFO in OBO format" ; schema1:url . kgr:efo.owl a schema1:OntologyProduct ; rdfs:label "EFO OWL" ; dcterms:description "The latest release of EFO in OWL format" ; schema1:url . kgr:rnacentral.api a schema1:ProgrammingInterface ; rdfs:label "RNAcentral REST API" ; dcterms:description "REST API for programmatic access to RNAcentral data" ; schema1:url . kgr:rnacentral.ftp a schema1:Product ; rdfs:label "RNAcentral FTP Archive" ; dcterms:description "FTP archive with current and archived release files (sequences and annotations)" ; schema1:url . kgr:rnacentral.portal a schema1:GraphicalInterface ; rdfs:label "RNAcentral Portal" ; dcterms:description "Web portal for searching and browsing ncRNA sequences, structures, and annotations" ; schema1:url . kgr:rnacentral.public-db a schema1:DataModelProduct ; rdfs:label "RNAcentral Public Postgres Database" ; dcterms:description "Public PostgreSQL database for direct SQL access to RNAcentral data" ; schema1:url . kgr:ubkg.csv a schema1:GraphProduct ; rdfs:label "UBKG Ontology CSV Files" ; dcterms:description "Ontology CSV files that can be imported into a neo4j instance to create a UBKG database. Requires UMLS API key to access." ; schema1:url . kgr:ubkg.neo4j a schema1:GraphProduct ; rdfs:label "UBKG Neo4j Docker Distribution" ; dcterms:description "Turnkey neo4j distributions that deploy fully-indexed, standalone UBKG instances as neo4j graph databases, running in a Docker container. Requires UMLS API key to access." ; schema1:url .