COSMIC
COSMIC (Catalogue Of Somatic Mutations In Cancer) is a comprehensive resource for somatic mutations in human cancer. It curates, standardizes, and integrates mutation data across genes, cancer types, and samples, and provides access via a web portal and licensed downloads.
[{"category": "Organization", "contact_details": [{"contact_type": "url", "value": "https://cancer.sanger.ac.uk/cosmic/about"}], "label": "COSMIC Team (Wellcome Sanger Institute)"}]
[{"category": "GraphicalInterface", "description": "Web portal for exploring somatic mutations, gene pages, cancer types, and curated annotations", "format": "http", "id": "cosmic.portal", "name": "COSMIC Portal", "original_source": ["cosmic"], "product_url": "https://cancer.sanger.ac.uk/cosmic"}, {"category": "Product", "description": "Top-level downloads page with links to COSMIC release files (registration/license required)", "format": "http", "id": "cosmic.downloads", "name": "COSMIC Downloads", "original_source": ["cosmic"], "product_url": "https://cancer.sanger.ac.uk/cosmic/download/cosmic"}, {"category": "DocumentationProduct", "description": "COSMIC Knowledgebase overview and documentation pages", "format": "http", "id": "cosmic.kb.overview", "name": "COSMIC-KB Portal overview", "original_source": ["cosmic"], "product_url": "https://www.cosmickb.org/about/"}, {"category": "Product", "description": "Network embeddings of the Bioteque graph that represent biological entities and their associations", "id": "bioteque.embeddings", "name": "Bioteque Embeddings", "original_source": ["chebi", "cosmic", "achilles", "depmap", "ccle", "gdsc", "cellosaurus", "clue", "ctd", "pharmacodb", "prism", "drugbank", "lincs", "compartments", "offsides", "sider", "drugcentral", "repohub", "chemicalchecker", "repodb", "disgenet", "opentargets", "creeds", "interpro", "reactome", "tissues", "dorothea", "progeny", "gtex", "hpa", "go", "corum", "huri", "intact", "omnipath", "string", "bto"], "product_url": "https://bioteque.irbbarcelona.org/downloads/embeddings", "secondary_source": ["bioteque"]}, {"category": "GraphProduct", "description": "RNA-KG as a Neo4j Dump", "format": "neo4j", "id": "rna-kg.kg.neo4j", "name": "RNA-KG Neo4j Dump", "original_source": ["dbsnp", "cosmic", "rnacentral", "ensembl", "circbase", "chebi", "pr", "ncbigene", "cl", "go", "mondo", "hp", "uberon", "vo", "pw", "reactome", "wikipathways"], "product_file_size": 3976840239, "product_url": "https://rna-kg.biodata.di.unimi.it/rnakgv20.dump", "secondary_source": ["rna-kg"]}, {"category": "GraphProduct", "description": "RNA-KG Nodes in CSV format", "format": "csv", "id": "rna-kg.kg.nodes", "name": "RNA-KG Nodes", "original_source": ["dbsnp", "cosmic", "rnacentral", "ensembl", "circbase", "chebi", "pr", "ncbigene", "cl", "go", "mondo", "hp", "uberon", "vo", "pw", "reactome", "wikipathways"], "product_file_size": 4424633304, "product_url": "https://rna-kg.biodata.di.unimi.it/nodes.csv", "secondary_source": ["rna-kg"]}, {"category": "GraphProduct", "description": "RNA-KG Edges in CSV format", "format": "csv", "id": "rna-kg.kg.edges", "name": "RNA-KG Edges", "original_source": ["dbsnp", "cosmic", "rnacentral", "ensembl", "circbase", "chebi", "pr", "ncbigene", "cl", "go", "mondo", "hp", "uberon", "vo", "pw", "reactome", "wikipathways"], "product_file_size": 18370248815, "product_url": "https://rna-kg.biodata.di.unimi.it/edges.csv", "secondary_source": ["rna-kg"]}]
{"activity_status": "active", "category": "DataSource", "contacts": [{"category": "Organization", "contact_details": [{"contact_type": "url", "value": "https://cancer.sanger.ac.uk/cosmic/about"}], "label": "COSMIC Team (Wellcome Sanger Institute)"}], "creation_date": "2025-07-08T00:00:00Z", "description": "COSMIC (Catalogue Of Somatic Mutations In Cancer) is a comprehensive resource for somatic mutations in human cancer. It curates, standardizes, and integrates mutation data across genes, cancer types, and samples, and provides access via a web portal and licensed downloads.", "domains": ["genomics", "biomedical"], "homepage_url": "https://cancer.sanger.ac.uk/cosmic", "id": "cosmic", "infores_id": "cosmic", "last_modified_date": "2025-09-09T00:00:00Z", "layout": "resource_detail", "license": {"id": "https://cancer.sanger.ac.uk/cosmic/license", "label": "COSMIC License"}, "name": "COSMIC", "products": [{"category": "GraphicalInterface", "description": "Web portal for exploring somatic mutations, gene pages, cancer types, and curated annotations", "format": "http", "id": "cosmic.portal", "name": "COSMIC Portal", "original_source": ["cosmic"], "product_url": "https://cancer.sanger.ac.uk/cosmic"}, {"category": "Product", "description": "Top-level downloads page with links to COSMIC release files (registration/license required)", "format": "http", "id": "cosmic.downloads", "name": "COSMIC Downloads", "original_source": ["cosmic"], "product_url": "https://cancer.sanger.ac.uk/cosmic/download/cosmic"}, {"category": "DocumentationProduct", "description": "COSMIC Knowledgebase overview and documentation pages", "format": "http", "id": "cosmic.kb.overview", "name": "COSMIC-KB Portal overview", "original_source": ["cosmic"], "product_url": "https://www.cosmickb.org/about/"}, {"category": "Product", "description": "Network embeddings of the Bioteque graph that represent biological entities and their associations", "id": "bioteque.embeddings", "name": "Bioteque Embeddings", "original_source": ["chebi", "cosmic", "achilles", "depmap", "ccle", "gdsc", "cellosaurus", "clue", "ctd", "pharmacodb", "prism", "drugbank", "lincs", "compartments", "offsides", "sider", "drugcentral", "repohub", "chemicalchecker", "repodb", "disgenet", "opentargets", "creeds", "interpro", "reactome", "tissues", "dorothea", "progeny", "gtex", "hpa", "go", "corum", "huri", "intact", "omnipath", "string", "bto"], "product_url": "https://bioteque.irbbarcelona.org/downloads/embeddings", "secondary_source": ["bioteque"]}, {"category": "GraphProduct", "description": "RNA-KG as a Neo4j Dump", "format": "neo4j", "id": "rna-kg.kg.neo4j", "name": "RNA-KG Neo4j Dump", "original_source": ["dbsnp", "cosmic", "rnacentral", "ensembl", "circbase", "chebi", "pr", "ncbigene", "cl", "go", "mondo", "hp", "uberon", "vo", "pw", "reactome", "wikipathways"], "product_file_size": 3976840239, "product_url": "https://rna-kg.biodata.di.unimi.it/rnakgv20.dump", "secondary_source": ["rna-kg"]}, {"category": "GraphProduct", "description": "RNA-KG Nodes in CSV format", "format": "csv", "id": "rna-kg.kg.nodes", "name": "RNA-KG Nodes", "original_source": ["dbsnp", "cosmic", "rnacentral", "ensembl", "circbase", "chebi", "pr", "ncbigene", "cl", "go", "mondo", "hp", "uberon", "vo", "pw", "reactome", "wikipathways"], "product_file_size": 4424633304, "product_url": "https://rna-kg.biodata.di.unimi.it/nodes.csv", "secondary_source": ["rna-kg"]}, {"category": "GraphProduct", "description": "RNA-KG Edges in CSV format", "format": "csv", "id": "rna-kg.kg.edges", "name": "RNA-KG Edges", "original_source": ["dbsnp", "cosmic", "rnacentral", "ensembl", "circbase", "chebi", "pr", "ncbigene", "cl", "go", "mondo", "hp", "uberon", "vo", "pw", "reactome", "wikipathways"], "product_file_size": 18370248815, "product_url": "https://rna-kg.biodata.di.unimi.it/edges.csv", "secondary_source": ["rna-kg"]}], "taxon": ["NCBITaxon:9606"], "warnings": ["COSMIC data downloads for commercial users are provided by Qiagen."]}