BioPortal
BioPortal is a comprehensive open repository and portal for biomedical ontologies and terminologies, providing search, browsing, mappings, versioned downloads, REST APIs, widgets, and analytics to support data integration, annotation, and semantic interoperability in the life and health sciences.
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{"activity_status": "active", "category": "Aggregator", "creation_date": "2025-08-20T00:00:00Z", "description": "BioPortal is a comprehensive open repository and portal for biomedical ontologies and terminologies, providing search, browsing, mappings, versioned downloads, REST APIs, widgets, and analytics to support data integration, annotation, and semantic interoperability in the life and health sciences.", "domains": ["biomedical", "clinical", "information technology", "upper"], "id": "bioportal", "infores_id": "bioportal", "last_modified_date": "2025-09-16T00:00:00Z", "layout": "resource_detail", "license": {"id": "https://www.bioontology.org/terms/", "label": "BioPortal Terms of Use (includes attribution & reuse conditions)"}, "name": "BioPortal", "products": [{"category": "GraphicalInterface", "description": "Web portal for searching, browsing, and visualizing biomedical ontologies and mappings", "format": "http", "id": "bioportal.portal", "name": "BioPortal Portal", "product_url": "https://bioportal.bioontology.org/"}, {"category": "ProgrammingInterface", "description": "REST API for ontology concepts, search, mappings, metrics, and downloads", "format": "http", "id": "bioportal.api", "name": "BioPortal REST API", "product_url": "http://data.bioontology.org/"}, {"category": "GraphProduct", "description": "PheKnowLator graph files, including subsets with and without inverse relations.", "format": "owl", "id": "pheknowlator.graph", "latest_version": "current_build", "name": "PheKnowLator graph", "original_source": ["cl", "clo", "chebi", "go", "hp", "mondo", "pw", "pr", "ro", "so", "uberon", "vo", "bioportal", "clinvar", "ctd", "disgenet", "ensembl", "genemania", "hgnc", "hpa", "ncbigene", "medgen", "reactome", "string", "uniprot"], "product_url": "https://console.cloud.google.com/storage/browser/pheknowlator/current_build/knowledge_graphs?pageState=(%22StorageObjectListTable%22:(%22f%22:%22%255B%255D%22))&inv=1&invt=Ab5_1Q&project=pheknowlator", "secondary_source": ["pheknowlator"], "versions": ["v1.0.0", "v2.0.0", "v2.1.0", "v3.0.2", "v4.0.0", "current_build"]}], "publications": [{"doi": "10.1093/nar/gkaf402", "id": "doi:10.1093/nar/gkaf402", "journal": "Nucleic Acids Research", "title": "BioPortal: an open community resource for sharing, searching, and utilizing biomedical ontologies", "year": "2025"}], "taxon": ["NCBITaxon:9606"], "warnings": ["Some ontologies have distinct licenses; review individual ontology license metadata before reuse."]}