name: C-Path Knowledge Graph
description: The C-Path Knowledge Graph project is intended to increase discoverability of rare disease datasets through integration with the Monarch Knowlege Graph.
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products: [{"category": "ProcessProduct", "description": "This repository is a code reference for the C-Path Knowledge Graph project, to increase discoverability of rare disease datasets through integration with the Monarch Knowlege Graph. Note that this is only a reference to scripts and queries associated with this project and is not provided as a runnable project because these workflows depend on an internal data catalog.", "format": "python", "id": "cpathkg.code", "name": "C-Path Knowledge Graph Integration", "original_source": ["biolink", "kg-monarch"], "product_url": "https://gitlab.c-path.org/c-pathontology/c-path-knowledge-graph-integration", "secondary_source": ["cpathkg"]}]
raw_data: {"activity_status": "active", "category": "KnowledgeGraph", "contacts": [{"category": "Organization", "label": "Critical Path Institute"}, {"category": "Individual", "contact_details": [{"contact_type": "email", "value": "ibraun@c-path.org"}, {"contact_type": "other", "contact_type_name": "Critical Path Institute GitLab", "contact_type_url": "https://gitlab.c-path.org/", "value": "ibraun"}], "label": "Ian Braun"}], "description": "The C-Path Knowledge Graph project is intended to increase discoverability of rare disease datasets through integration with the Monarch Knowlege Graph.", "domains": ["health"], "id": "cpathkg", "layout": "resource_detail", "name": "C-Path Knowledge Graph", "products": [{"category": "ProcessProduct", "description": "This repository is a code reference for the C-Path Knowledge Graph project, to increase discoverability of rare disease datasets through integration with the Monarch Knowlege Graph. Note that this is only a reference to scripts and queries associated with this project and is not provided as a runnable project because these workflows depend on an internal data catalog.", "format": "python", "id": "cpathkg.code", "name": "C-Path Knowledge Graph Integration", "original_source": ["biolink", "kg-monarch"], "product_url": "https://gitlab.c-path.org/c-pathontology/c-path-knowledge-graph-integration", "secondary_source": ["cpathkg"]}], "publications": [{"authors": ["Braun I", "Hartley E", "Olson D", "Matentzoglu N", "Schaper K", "Walls R", "Vasilevsky N"], "doi": "10.1093/jamiaopen/ooaf001", "id": "doi:10.1093/jamiaopen/ooaf001", "title": "Increased discoverability of rare disease datasets through knowledge graph integration", "year": "2025"}]}