PrimeKG
PrimeKG (Precision Medicine Knowledge Graph) integrates 20 high-quality biomedical resources to describe 17,080 diseases with over 4 million relationships across ten major biological scales.
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{"activity_status": "active", "category": "KnowledgeGraph", "collection": ["ber"], "contacts": [{"category": "Individual", "contact_details": [{"contact_type": "email", "value": "marinka@hms.harvard.edu"}, {"contact_type": "github", "value": "marinkaz"}], "label": "Marinka Zitnik"}], "creation_date": "2025-03-09T00:00:00Z", "description": "PrimeKG (Precision Medicine Knowledge Graph) integrates 20 high-quality biomedical resources to describe 17,080 diseases with over 4 million relationships across ten major biological scales.", "domains": ["health", "precision medicine", "biomedical", "pathways", "systems biology"], "evaluation_page": "resource/primekg/primekg_eval.html", "homepage_url": "https://zitniklab.hms.harvard.edu/projects/PrimeKG", "id": "primekg", "infores_id": "primekg", "last_modified_date": "2026-02-20T00:00:00Z", "layout": "resource_detail", "license": {"id": "https://opensource.org/licenses/MIT", "label": "MIT License"}, "name": "PrimeKG", "products": [{"category": "GraphProduct", "description": "The full PrimeKG dataset containing disease relationships.", "id": "primekg.graph", "name": "PrimeKG Full Dataset", "original_source": ["primekg"], "product_url": "https://dataverse.harvard.edu/api/access/datafile/6180620", "secondary_source": ["primekg"], "warnings": ["File was not able to be retrieved when checked on 2026-04-07: HTTP 403 error when accessing file", "File was not able to be retrieved when checked on 2026-03-30_ HTTP 403 error when accessing file", "File was not able to be retrieved when checked on 2026-02-04_ Timeout connecting to URL", "File was not able to be retrieved when checked on 2026-04-10: HTTP 403 error when accessing file"]}], "repository": "https://github.com/mims-harvard/PrimeKG", "taxon": ["NCBITaxon:9606"]}