InnateDB
InnateDB is a publicly available database of genes, proteins, experimentally-verified interactions and signaling pathways involved in the innate immune response of humans, mice and bovines to microbial infection, with over 18,780 manually curated interactions and integrated bioinformatics and visualization tools for systems-level analysis.
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{"activity_status": "active", "category": "DataSource", "contacts": [{"category": "Organization", "contact_details": [{"contact_type": "email", "value": "innatedb-mail@sfu.ca"}], "label": "Brinkman Laboratory, Simon Fraser University"}], "creation_date": "2025-10-30T00:00:00Z", "description": "InnateDB is a publicly available database of genes, proteins, experimentally-verified interactions and signaling pathways involved in the innate immune response of humans, mice and bovines to microbial infection, with over 18,780 manually curated interactions and integrated bioinformatics and visualization tools for systems-level analysis.", "domains": ["immunology", "biological systems", "systems biology"], "homepage_url": "https://www.innatedb.com/", "id": "innatedb", "infores_id": "innatedb", "last_modified_date": "2025-11-26T00:00:00Z", "layout": "resource_detail", "name": "InnateDB", "products": [{"category": "GraphicalInterface", "description": "Web interface for searching and analyzing innate immunity genes, proteins, interactions, and pathways", "format": "http", "id": "innatedb.portal", "name": "InnateDB Web Portal", "original_source": ["innatedb"], "product_url": "https://www.innatedb.com/"}, {"category": "Product", "description": "Downloadable data files for interactions, pathways, and annotations", "id": "innatedb.downloads", "name": "InnateDB Data Downloads", "original_source": ["innatedb"], "product_url": "https://www.innatedb.com/"}], "publications": [{"id": "https://doi.org/10.1093/nar/gks1147", "journal": "Nucleic Acids Research", "title": "InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation", "year": "2013"}], "synonyms": ["InnateDB"], "taxon": ["NCBITaxon:2"]}