RNA-KG
An ontology-based KG for representing interactions involving RNA molecules.
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{"activity_status": "active", "category": "KnowledgeGraph", "contacts": [{"category": "Individual", "contact_details": [{"contact_type": "github", "value": "emanuelecavalleri"}, {"contact_type": "email", "value": "emanuele.cavalleri@unimi.it"}], "label": "Emanuele Cavalleri"}], "creation_date": "2025-08-25T00:00:00Z", "description": "An ontology-based KG for representing interactions involving RNA molecules.", "domains": ["drug discovery", "biomedical", "health"], "evaluation_page": "resource/rna-kg/rna-kg_eval_automated.html", "homepage_url": "https://RNA-KG.biodata.di.unimi.it", "id": "rna-kg", "last_modified_date": "2025-08-25T00:00:00Z", "layout": "resource_detail", "license": {"id": "https://www.apache.org/licenses/LICENSE-2.0", "label": "Apache License 2.0"}, "name": "RNA-KG", "products": [{"category": "GraphProduct", "description": "RNA-KG as a Neo4j Dump", "format": "neo4j", "id": "rna-kg.kg.neo4j", "name": "RNA-KG Neo4j Dump", "original_source": ["dbsnp", "cosmic", "rnacentral", "ensembl", "circbase", "chebi", "pr", "ncbigene", "cl", "go", "mondo", "hp", "uberon", "vo", "pw", "reactome", "wikipathways"], "product_file_size": 3976840239, "product_url": "https://rna-kg.biodata.di.unimi.it/rnakgv20.dump", "secondary_source": ["rna-kg"]}, {"category": "GraphProduct", "description": "RNA-KG Nodes in CSV format", "format": "csv", "id": "rna-kg.kg.nodes", "name": "RNA-KG Nodes", "original_source": ["dbsnp", "cosmic", "rnacentral", "ensembl", "circbase", "chebi", "pr", "ncbigene", "cl", "go", "mondo", "hp", "uberon", "vo", "pw", "reactome", "wikipathways"], "product_file_size": 4424633304, "product_url": "https://rna-kg.biodata.di.unimi.it/nodes.csv", "secondary_source": ["rna-kg"]}, {"category": "GraphProduct", "description": "RNA-KG Edges in CSV format", "format": "csv", "id": "rna-kg.kg.edges", "name": "RNA-KG Edges", "original_source": ["dbsnp", "cosmic", "rnacentral", "ensembl", "circbase", "chebi", "pr", "ncbigene", "cl", "go", "mondo", "hp", "uberon", "vo", "pw", "reactome", "wikipathways"], "product_file_size": 18370248815, "product_url": "https://rna-kg.biodata.di.unimi.it/edges.csv", "secondary_source": ["rna-kg"]}], "publications": [{"doi": "10.1038/s41597-024-03673-7", "id": "doi:10.1038/s41597-024-03673-7", "title": "An ontology-based knowledge graph for representing interactions involving RNA molecules"}, {"doi": "10.48550/arXiv.2508.07427", "id": "doi:10.48550/arXiv.2508.07427", "title": "RNA-KG v2.0: An RNA-centered Knowledge Graph with Properties"}, {"doi": "10.1093/bioadv/vbaf109", "id": "doi:10.1093/bioadv/vbaf109", "title": "RNA knowledge-graph analysis through homogeneous embedding methods"}], "repository": "https://github.com/AnacletoLAB/RNA-KG"}