Cell Ontology Knowledge Graph (CL-KG)
CL-KG is a knowledge graph integrating the cell ontology and linked ontologies with hierarchical annotations of single cell transcriptomics data from CellXGene.
[{"category": "Individual", "contact_details": [{"contact_type": "github", "value": "ubyndr"}], "label": "Ugur Bayindir", "orcid": "0000-0002-6012-3729"}]
[{"category": "ProgrammingInterface", "connection_url": "cl-kg-neo4j-db.cellgeni.sanger.ac.uk:443", "description": "Publicly available Neo4j instance for CL-KG.", "id": "cl-kg.api.neo4j", "is_neo4j": true, "is_public": true, "name": "CL-KG Neo4j graph instance", "original_source": ["cl-kg"], "product_url": "https://cellular-semantics.sanger.ac.uk/browser/", "secondary_source": ["cl-kg"]}]
{"activity_status": "active", "category": "KnowledgeGraph", "contacts": [{"category": "Individual", "contact_details": [{"contact_type": "github", "value": "ubyndr"}], "label": "Ugur Bayindir", "orcid": "0000-0002-6012-3729"}], "creation_date": "2025-03-09T00:00:00Z", "description": "CL-KG is a knowledge graph integrating the cell ontology and linked ontologies with hierarchical annotations of single cell transcriptomics data from CellXGene.", "domains": ["biological systems"], "evaluation_page": "resource/cl-kg/cl-kg_eval_automated.html", "homepage_url": "https://cellular-semantics.github.io/CL_KG/", "id": "cl-kg", "last_modified_date": "2026-01-06T00:00:00Z", "layout": "resource_detail", "license": {"id": "https://www.apache.org/licenses/LICENSE-2.0", "label": "Apache License 2.0"}, "name": "Cell Ontology Knowledge Graph (CL-KG)", "products": [{"category": "ProgrammingInterface", "connection_url": "cl-kg-neo4j-db.cellgeni.sanger.ac.uk:443", "description": "Publicly available Neo4j instance for CL-KG.", "id": "cl-kg.api.neo4j", "is_neo4j": true, "is_public": true, "name": "CL-KG Neo4j graph instance", "original_source": ["cl-kg"], "product_url": "https://cellular-semantics.sanger.ac.uk/browser/", "secondary_source": ["cl-kg"]}], "repository": "https://github.com/Cellular-Semantics/CL_KG"}