Mint
MINT (The Molecular INTeraction database) is a public and open source database focusing on experimentally verified protein-protein interactions mined from the scientific literature by expert curators. Molecular interactions are annotated according to international PSI-MI standards and follow the PSI-MI controlled vocabulary. MINT is a founder and main member of the IMEx consortium and provides data that is integrated into the IntAct database as part of a single non-redundant open access dataset. As an ELIXIR Core Data Resource and Global Core Biodata Resource, MINT contains over 139,000 interactions involving 27,800+ interactors from 676 organisms extracted from 6,500+ publications.
[{"category": "Organization", "label": "MINT Team - University of Rome Tor Vergata"}]
[{"category": "GraphicalInterface", "description": "Web interface for browsing, searching, and visualizing protein-protein interaction data from MINT with advanced search capabilities.", "format": "http", "id": "mint.portal", "name": "MINT Web Portal", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "https://mint.bio.uniroma2.it/"}, {"category": "Product", "description": "Complete MINT dataset in PSI-MI MITAB 2.7 format accessible via PSICQUIC web service.", "format": "psi_mi_mitab", "id": "mint.mitab.all", "name": "MINT MITAB Full Dataset", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/current/search/query/*", "warnings": ["File was not able to be retrieved when checked on 2026-05-19: No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-30_ No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-08_ HTTP 500 error when accessing file", "File was not able to be retrieved when checked on 2026-02-18_ Timeout connecting to URL"]}, {"category": "Product", "description": "Human protein interactions from MINT in PSI-MI MITAB format for Homo sapiens (NCBITaxon 9606).", "format": "psi_mi_mitab", "id": "mint.mitab.human", "name": "MINT Human Interactions", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/current/search/query/species:human", "warnings": ["File was not able to be retrieved when checked on 2026-05-19: No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-30_ No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-08_ HTTP 500 error when accessing file", "File was not able to be retrieved when checked on 2025-12-04_ Timeout connecting to URL"]}, {"category": "Product", "description": "Mouse protein interactions from MINT in PSI-MI MITAB format for Mus musculus (NCBITaxon 10090).", "format": "psi_mi_mitab", "id": "mint.mitab.mouse", "name": "MINT Mouse Interactions", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/current/search/query/species:mouse", "warnings": ["File was not able to be retrieved when checked on 2026-05-19: No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-30_ No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-08_ HTTP 500 error when accessing file", "File was not able to be retrieved when checked on 2026-01-06_ Timeout connecting to URL"]}, {"category": "ProgrammingInterface", "description": "PSICQUIC SOAP and REST web services for programmatic access to MINT data using Molecular Interactions Query Language (MIQL).", "id": "mint.psicquic", "name": "MINT PSICQUIC Web Service", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/"}, {"category": "GraphicalInterface", "description": "Advanced search interface for querying MINT data with field-specific searches and boolean operators.", "format": "http", "id": "mint.advanced.search", "name": "MINT Advanced Search", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "https://mint.bio.uniroma2.it/index.php/advanced-search/"}, {"category": "Product", "description": "Historical consolidated protein interaction index in PSI-MITAB 2.5 format aggregating data from BIND, BioGrid, DIP, HPRD, IntAct, MINT, MPact, MPPI and OPHID", "format": "psi_mi_mitab", "id": "irefindex.database", "name": "iRefIndex Database", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "bind"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "irefindex"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}]}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (full network, scored links between proteins)", "format": "txt", "id": "string.protein.links", "name": "STRING Protein Links", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 138154280240, "product_url": "https://stringdb-downloads.org/download/protein.links.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (full network, incl. subscores per channel)", "format": "txt", "id": "string.protein.links.detailed", "name": "STRING Protein Links Detailed", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 203534412387, "product_url": "https://stringdb-downloads.org/download/protein.links.detailed.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (full network, incl. distinction: direct vs. interologs)", "format": "txt", "id": "string.protein.links.full", "name": "STRING Protein Links Full", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 214269334954, "product_url": "https://stringdb-downloads.org/download/protein.links.full.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (physical subnetwork, scored links between proteins)", "format": "txt", "id": "string.protein.physical.links", "name": "STRING Protein Physical Links", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 11867396121, "product_url": "https://stringdb-downloads.org/download/protein.physical.links.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (physical subnetwork, incl. subscores per channel)", "format": "txt", "id": "string.protein.physical.links.detailed", "name": "STRING Protein Physical Links Detailed", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 14859366689, "product_url": "https://stringdb-downloads.org/download/protein.physical.links.detailed.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (physical subnetwork, incl. distinction: direct vs. interologs)", "format": "txt", "id": "string.protein.physical.links.full", "name": "STRING Protein Physical Links Full", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 15528028374, "product_url": "https://stringdb-downloads.org/download/protein.physical.links.full.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "association scores between orthologous groups", "format": "txt", "id": "string.cog.links", "name": "STRING COG Links", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 185338269, "product_url": "https://stringdb-downloads.org/download/COG.links.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "association scores (incl. subscores per channel)", "format": "txt", "id": "string.cog.links.detailed", "name": "STRING COG Links Detailed", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 250279091, "product_url": "https://stringdb-downloads.org/download/COG.links.detailed.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "full database, part II: the networks (nodes, edges, scores,...)", "id": "string.database", "name": "STRING Database Network Schema", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 281505096430, "product_url": "https://stringdb-downloads.org/download/network_schema.v12.0.sql.gz"}, {"category": "ProgrammingInterface", "connection_url": "https://www.ebi.ac.uk/intact/ws", "description": "IntAct web service and URL-based programmatic interface for retrieving molecular interaction networks in PSI-MI formats.", "format": "http", "id": "intact.api", "is_public": true, "name": "IntAct Web Service", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://www.ebi.ac.uk/intact/ws"}, {"category": "Product", "description": "IntAct data in PSI-MI XML 2.5 format (directory)", "format": "psi_mi_xml", "id": "intact.ftp.psi25", "name": "IntAct PSI-MI XML 2.5", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://ftp.ebi.ac.uk/pub/databases/intact/current/psi25/"}, {"category": "Product", "description": "IntAct data in PSI-MI XML 3.0 format (directory)", "format": "psi_mi_xml", "id": "intact.ftp.psi30", "name": "IntAct PSI-MI XML 3.0", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://ftp.ebi.ac.uk/pub/databases/intact/current/psi30/"}, {"category": "Product", "description": "IntAct data in PSI-MI MITAB format (directory)", "format": "psi_mi_mitab", "id": "intact.ftp.psimitab", "name": "IntAct PSI-MI MITAB 2.7", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://ftp.ebi.ac.uk/pub/databases/intact/current/psimitab/"}, {"category": "Product", "description": "Entire MITAB export of the database as a single archive (intact.zip)", "format": "psi_mi_mitab", "id": "intact.ftp.psimitab.all", "name": "IntAct MITAB Archive", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_file_size": 846305671, "product_url": "https://ftp.ebi.ac.uk/pub/databases/intact/current/psimitab/intact.zip"}, {"category": "Product", "description": "Curated and computational datasets (disease-, method-, and species-specific) with per-dataset downloads", "format": "http", "id": "intact.datasets", "name": "IntAct Datasets", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://www.ebi.ac.uk/intact/download/datasets"}]
{"activity_status": "active", "category": "Aggregator", "contacts": [{"category": "Organization", "label": "MINT Team - University of Rome Tor Vergata"}], "creation_date": "2025-10-31T00:00:00Z", "description": "MINT (The Molecular INTeraction database) is a public and open source database focusing on experimentally verified protein-protein interactions mined from the scientific literature by expert curators. Molecular interactions are annotated according to international PSI-MI standards and follow the PSI-MI controlled vocabulary. MINT is a founder and main member of the IMEx consortium and provides data that is integrated into the IntAct database as part of a single non-redundant open access dataset. As an ELIXIR Core Data Resource and Global Core Biodata Resource, MINT contains over 139,000 interactions involving 27,800+ interactors from 676 organisms extracted from 6,500+ publications.", "domains": ["proteomics", "biomedical", "systems biology", "biological systems"], "homepage_url": "https://mint.bio.uniroma2.it/", "id": "mint", "last_modified_date": "2025-10-31T00:00:00Z", "layout": "resource_detail", "license": {"id": "https://creativecommons.org/licenses/by/4.0/", "label": "CC BY 4.0", "logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png"}, "name": "Mint", "products": [{"category": "GraphicalInterface", "description": "Web interface for browsing, searching, and visualizing protein-protein interaction data from MINT with advanced search capabilities.", "format": "http", "id": "mint.portal", "name": "MINT Web Portal", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "https://mint.bio.uniroma2.it/"}, {"category": "Product", "description": "Complete MINT dataset in PSI-MI MITAB 2.7 format accessible via PSICQUIC web service.", "format": "psi_mi_mitab", "id": "mint.mitab.all", "name": "MINT MITAB Full Dataset", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/current/search/query/*", "warnings": ["File was not able to be retrieved when checked on 2026-05-19: No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-30_ No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-08_ HTTP 500 error when accessing file", "File was not able to be retrieved when checked on 2026-02-18_ Timeout connecting to URL"]}, {"category": "Product", "description": "Human protein interactions from MINT in PSI-MI MITAB format for Homo sapiens (NCBITaxon 9606).", "format": "psi_mi_mitab", "id": "mint.mitab.human", "name": "MINT Human Interactions", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/current/search/query/species:human", "warnings": ["File was not able to be retrieved when checked on 2026-05-19: No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-30_ No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-08_ HTTP 500 error when accessing file", "File was not able to be retrieved when checked on 2025-12-04_ Timeout connecting to URL"]}, {"category": "Product", "description": "Mouse protein interactions from MINT in PSI-MI MITAB format for Mus musculus (NCBITaxon 10090).", "format": "psi_mi_mitab", "id": "mint.mitab.mouse", "name": "MINT Mouse Interactions", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/current/search/query/species:mouse", "warnings": ["File was not able to be retrieved when checked on 2026-05-19: No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-30_ No Content-Length header found", "File was not able to be retrieved when checked on 2026-03-08_ HTTP 500 error when accessing file", "File was not able to be retrieved when checked on 2026-01-06_ Timeout connecting to URL"]}, {"category": "ProgrammingInterface", "description": "PSICQUIC SOAP and REST web services for programmatic access to MINT data using Molecular Interactions Query Language (MIQL).", "id": "mint.psicquic", "name": "MINT PSICQUIC Web Service", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/"}, {"category": "GraphicalInterface", "description": "Advanced search interface for querying MINT data with field-specific searches and boolean operators.", "format": "http", "id": "mint.advanced.search", "name": "MINT Advanced Search", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "mint"}], "product_url": "https://mint.bio.uniroma2.it/index.php/advanced-search/"}, {"category": "Product", "description": "Historical consolidated protein interaction index in PSI-MITAB 2.5 format aggregating data from BIND, BioGrid, DIP, HPRD, IntAct, MINT, MPact, MPPI and OPHID", "format": "psi_mi_mitab", "id": "irefindex.database", "name": "iRefIndex Database", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "bind"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "irefindex"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}]}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (full network, scored links between proteins)", "format": "txt", "id": "string.protein.links", "name": "STRING Protein Links", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 138154280240, "product_url": "https://stringdb-downloads.org/download/protein.links.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (full network, incl. subscores per channel)", "format": "txt", "id": "string.protein.links.detailed", "name": "STRING Protein Links Detailed", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 203534412387, "product_url": "https://stringdb-downloads.org/download/protein.links.detailed.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (full network, incl. distinction: direct vs. interologs)", "format": "txt", "id": "string.protein.links.full", "name": "STRING Protein Links Full", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 214269334954, "product_url": "https://stringdb-downloads.org/download/protein.links.full.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (physical subnetwork, scored links between proteins)", "format": "txt", "id": "string.protein.physical.links", "name": "STRING Protein Physical Links", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 11867396121, "product_url": "https://stringdb-downloads.org/download/protein.physical.links.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (physical subnetwork, incl. subscores per channel)", "format": "txt", "id": "string.protein.physical.links.detailed", "name": "STRING Protein Physical Links Detailed", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 14859366689, "product_url": "https://stringdb-downloads.org/download/protein.physical.links.detailed.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "protein network data (physical subnetwork, incl. distinction: direct vs. interologs)", "format": "txt", "id": "string.protein.physical.links.full", "name": "STRING Protein Physical Links Full", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 15528028374, "product_url": "https://stringdb-downloads.org/download/protein.physical.links.full.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "association scores between orthologous groups", "format": "txt", "id": "string.cog.links", "name": "STRING COG Links", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 185338269, "product_url": "https://stringdb-downloads.org/download/COG.links.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "association scores (incl. subscores per channel)", "format": "txt", "id": "string.cog.links.detailed", "name": "STRING COG Links Detailed", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 250279091, "product_url": "https://stringdb-downloads.org/download/COG.links.detailed.v12.0.txt.gz"}, {"category": "GraphProduct", "compression": "gzip", "description": "full database, part II: the networks (nodes, edges, scores,...)", "id": "string.database", "name": "STRING Database Network Schema", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "biocyc"}, {"relation_type": "prov:hadPrimarySource", "source": "biogrid"}, {"relation_type": "prov:hadPrimarySource", "source": "cog"}, {"relation_type": "prov:hadPrimarySource", "source": "compartments"}, {"relation_type": "prov:hadPrimarySource", "source": "dip"}, {"relation_type": "prov:hadPrimarySource", "source": "diseases"}, {"relation_type": "prov:hadPrimarySource", "source": "eggnog"}, {"relation_type": "prov:hadPrimarySource", "source": "ensembl"}, {"relation_type": "prov:hadPrimarySource", "source": "flybase"}, {"relation_type": "prov:hadPrimarySource", "source": "geo"}, {"relation_type": "prov:hadPrimarySource", "source": "go"}, {"relation_type": "prov:hadPrimarySource", "source": "hgnc"}, {"relation_type": "prov:hadPrimarySource", "source": "hprd"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "interpro"}, {"relation_type": "prov:hadPrimarySource", "source": "kegg"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "omim"}, {"relation_type": "prov:hadPrimarySource", "source": "pdb"}, {"relation_type": "prov:hadPrimarySource", "source": "pfam"}, {"relation_type": "prov:hadPrimarySource", "source": "progenomes"}, {"relation_type": "prov:hadPrimarySource", "source": "proteomehd"}, {"relation_type": "prov:hadPrimarySource", "source": "pubmedcentral"}, {"relation_type": "prov:hadPrimarySource", "source": "reactome"}, {"relation_type": "prov:hadPrimarySource", "source": "refseq"}, {"relation_type": "prov:hadPrimarySource", "source": "sgd"}, {"relation_type": "prov:hadPrimarySource", "source": "simap"}, {"relation_type": "prov:hadPrimarySource", "source": "smart"}, {"relation_type": "prov:hadPrimarySource", "source": "string"}, {"relation_type": "prov:hadPrimarySource", "source": "swissmodel"}, {"relation_type": "prov:hadPrimarySource", "source": "tissues"}, {"relation_type": "prov:hadPrimarySource", "source": "uniprot"}, {"relation_type": "prov:hadPrimarySource", "source": "wikipathways"}, {"relation_type": "prov:hadPrimarySource", "source": "wormbase"}], "product_file_size": 281505096430, "product_url": "https://stringdb-downloads.org/download/network_schema.v12.0.sql.gz"}, {"category": "ProgrammingInterface", "connection_url": "https://www.ebi.ac.uk/intact/ws", "description": "IntAct web service and URL-based programmatic interface for retrieving molecular interaction networks in PSI-MI formats.", "format": "http", "id": "intact.api", "is_public": true, "name": "IntAct Web Service", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://www.ebi.ac.uk/intact/ws"}, {"category": "Product", "description": "IntAct data in PSI-MI XML 2.5 format (directory)", "format": "psi_mi_xml", "id": "intact.ftp.psi25", "name": "IntAct PSI-MI XML 2.5", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://ftp.ebi.ac.uk/pub/databases/intact/current/psi25/"}, {"category": "Product", "description": "IntAct data in PSI-MI XML 3.0 format (directory)", "format": "psi_mi_xml", "id": "intact.ftp.psi30", "name": "IntAct PSI-MI XML 3.0", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://ftp.ebi.ac.uk/pub/databases/intact/current/psi30/"}, {"category": "Product", "description": "IntAct data in PSI-MI MITAB format (directory)", "format": "psi_mi_mitab", "id": "intact.ftp.psimitab", "name": "IntAct PSI-MI MITAB 2.7", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://ftp.ebi.ac.uk/pub/databases/intact/current/psimitab/"}, {"category": "Product", "description": "Entire MITAB export of the database as a single archive (intact.zip)", "format": "psi_mi_mitab", "id": "intact.ftp.psimitab.all", "name": "IntAct MITAB Archive", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_file_size": 846305671, "product_url": "https://ftp.ebi.ac.uk/pub/databases/intact/current/psimitab/intact.zip"}, {"category": "Product", "description": "Curated and computational datasets (disease-, method-, and species-specific) with per-dataset downloads", "format": "http", "id": "intact.datasets", "name": "IntAct Datasets", "original_source": [{"relation_type": "prov:hadPrimarySource", "source": "afcs"}, {"relation_type": "prov:hadPrimarySource", "source": "hpidb"}, {"relation_type": "prov:hadPrimarySource", "source": "intact"}, {"relation_type": "prov:hadPrimarySource", "source": "mint"}, {"relation_type": "prov:hadPrimarySource", "source": "pdbe"}], "product_url": "https://www.ebi.ac.uk/intact/download/datasets"}], "publications": [{"doi": "10.1016/s0014-5793(01)03293-8", "id": "PMID:11911893", "journal": "FEBS Lett", "title": "MINT: a Molecular INTeraction database", "year": "2002"}, {"doi": "10.1093/nar/gkl950", "id": "PMID:17135203", "journal": "Nucleic Acids Res", "title": "MINT: the Molecular INTeraction database", "year": "2007"}, {"doi": "10.1093/nar/gkr930", "id": "PMID:22096227", "journal": "Nucleic Acids Res", "title": "MINT, the molecular interaction database: 2012 update", "year": "2012"}], "synonyms": ["MINT", "Molecular INTeraction Database"]}