Kids First Data Resource Center
The Gabriella Miller Kids First Pediatric Research Program Data Resource Center (Kids First DRC) provides researchers access to genomic and clinical data from pediatric cancer and structural birth defect cohorts to accelerate discovery and development of more effective treatments.
[{"category": "Organization", "contact_details": [{"contact_type": "email", "value": "support@kidsfirstdrc.org"}, {"contact_type": "url", "value": "https://kidsfirstdrc.org/"}], "label": "Kids First Data Resource Center"}, {"category": "Organization", "contact_details": [{"contact_type": "url", "value": "https://d3b.center/"}], "label": "Children's Hospital of Philadelphia"}]
[{"category": "GraphicalInterface", "description": "Centralized platform providing access to harmonized clinical and genomic data from childhood cancer and congenital disorder cohorts, supporting cohort discovery and analysis.", "id": "kidsfirst.portal", "name": "Kids First Data Resource Portal", "product_url": "https://portal.kidsfirstdrc.org/"}, {"category": "GraphicalInterface", "description": "Cloud-based analysis platform for Kids First data, allowing researchers to analyze and integrate genomic and clinical data in a secure environment.", "id": "kidsfirst.cavatica", "name": "CAVATICA Platform", "product_url": "https://cavatica.sbgenomics.com/"}, {"category": "GraphicalInterface", "description": "Web-based tool for exploring and visualizing pediatric cancer genomic datasets, integrated with clinical data.", "id": "kidsfirst.pedcbioportal", "name": "PedcBioPortal", "product_url": "https://pedcbioportal.kidsfirstdrc.org/"}, {"category": "GraphProduct", "description": "Turnkey neo4j distributions that deploy fully-indexed, standalone UBKG instances as neo4j graph databases, running in a Docker container. Requires UMLS API key to access.", "dump_format": "neo4j", "id": "ubkg.neo4j", "name": "UBKG Neo4j Docker Distribution", "original_source": ["hgnc", "loinc", "icd10", "snomedct", "uberon", "pato", "cl", "doid", "obi", "obib", "edam", "hsapdv", "sbo", "mi", "chebi", "mp", "ordo", "uniprot", "uo", "mondo", "efo", "pgo", "gencode", "reactome", "hra", "hubmap", "sennet", "stellar", "dct", "clinvar", "connectivitymap", "hp", "mp", "msigdb", "wikipathways", "clingen", "string", "4dn", "erccrbp", "erccreg", "faldo", "glycordf", "glycocoo", "gtex", "kidsfirst", "lincs", "motrpac", "mw", "npo", "sckan", "disgenet", "biomarker", "opentargets"], "product_url": "https://ubkg-downloads.xconsortia.org/", "secondary_source": ["ubkg"]}, {"category": "GraphProduct", "description": "Ontology CSV files that can be imported into a neo4j instance to create a UBKG database. Requires UMLS API key to access.", "format": "csv", "id": "ubkg.csv", "name": "UBKG Ontology CSV Files", "original_source": ["hgnc", "loinc", "icd10", "snomedct", "uberon", "pato", "cl", "doid", "obi", "obib", "edam", "hsapdv", "sbo", "mi", "chebi", "mp", "ordo", "uniprot", "uo", "mondo", "efo", "pgo", "gencode", "reactome", "hra", "hubmap", "sennet", "stellar", "dct", "clinvar", "connectivitymap", "hp", "mp", "msigdb", "wikipathways", "clingen", "string", "4dn", "erccrbp", "erccreg", "faldo", "glycordf", "glycocoo", "gtex", "kidsfirst", "lincs", "motrpac", "mw", "npo", "sckan", "disgenet", "biomarker", "opentargets"], "product_url": "https://ubkg-downloads.xconsortia.org/", "secondary_source": ["ubkg"]}]
{"activity_status": "active", "category": "DataSource", "contacts": [{"category": "Organization", "contact_details": [{"contact_type": "email", "value": "support@kidsfirstdrc.org"}, {"contact_type": "url", "value": "https://kidsfirstdrc.org/"}], "label": "Kids First Data Resource Center"}, {"category": "Organization", "contact_details": [{"contact_type": "url", "value": "https://d3b.center/"}], "label": "Children's Hospital of Philadelphia"}], "description": "The Gabriella Miller Kids First Pediatric Research Program Data Resource Center (Kids First DRC) provides researchers access to genomic and clinical data from pediatric cancer and structural birth defect cohorts to accelerate discovery and development of more effective treatments.", "domains": ["health", "biomedical", "genomics", "clinical"], "homepage_url": "https://kidsfirstdrc.org/", "id": "kidsfirst", "layout": "resource_detail", "name": "Kids First Data Resource Center", "products": [{"category": "GraphicalInterface", "description": "Centralized platform providing access to harmonized clinical and genomic data from childhood cancer and congenital disorder cohorts, supporting cohort discovery and analysis.", "id": "kidsfirst.portal", "name": "Kids First Data Resource Portal", "product_url": "https://portal.kidsfirstdrc.org/"}, {"category": "GraphicalInterface", "description": "Cloud-based analysis platform for Kids First data, allowing researchers to analyze and integrate genomic and clinical data in a secure environment.", "id": "kidsfirst.cavatica", "name": "CAVATICA Platform", "product_url": "https://cavatica.sbgenomics.com/"}, {"category": "GraphicalInterface", "description": "Web-based tool for exploring and visualizing pediatric cancer genomic datasets, integrated with clinical data.", "id": "kidsfirst.pedcbioportal", "name": "PedcBioPortal", "product_url": "https://pedcbioportal.kidsfirstdrc.org/"}, {"category": "GraphProduct", "description": "Turnkey neo4j distributions that deploy fully-indexed, standalone UBKG instances as neo4j graph databases, running in a Docker container. Requires UMLS API key to access.", "dump_format": "neo4j", "id": "ubkg.neo4j", "name": "UBKG Neo4j Docker Distribution", "original_source": ["hgnc", "loinc", "icd10", "snomedct", "uberon", "pato", "cl", "doid", "obi", "obib", "edam", "hsapdv", "sbo", "mi", "chebi", "mp", "ordo", "uniprot", "uo", "mondo", "efo", "pgo", "gencode", "reactome", "hra", "hubmap", "sennet", "stellar", "dct", "clinvar", "connectivitymap", "hp", "mp", "msigdb", "wikipathways", "clingen", "string", "4dn", "erccrbp", "erccreg", "faldo", "glycordf", "glycocoo", "gtex", "kidsfirst", "lincs", "motrpac", "mw", "npo", "sckan", "disgenet", "biomarker", "opentargets"], "product_url": "https://ubkg-downloads.xconsortia.org/", "secondary_source": ["ubkg"]}, {"category": "GraphProduct", "description": "Ontology CSV files that can be imported into a neo4j instance to create a UBKG database. Requires UMLS API key to access.", "format": "csv", "id": "ubkg.csv", "name": "UBKG Ontology CSV Files", "original_source": ["hgnc", "loinc", "icd10", "snomedct", "uberon", "pato", "cl", "doid", "obi", "obib", "edam", "hsapdv", "sbo", "mi", "chebi", "mp", "ordo", "uniprot", "uo", "mondo", "efo", "pgo", "gencode", "reactome", "hra", "hubmap", "sennet", "stellar", "dct", "clinvar", "connectivitymap", "hp", "mp", "msigdb", "wikipathways", "clingen", "string", "4dn", "erccrbp", "erccreg", "faldo", "glycordf", "glycocoo", "gtex", "kidsfirst", "lincs", "motrpac", "mw", "npo", "sckan", "disgenet", "biomarker", "opentargets"], "product_url": "https://ubkg-downloads.xconsortia.org/", "secondary_source": ["ubkg"]}], "repository": "https://github.com/kids-first/", "taxon": ["NCBITaxon:9606"]}