KG-Microbe documentation

Contents:

• Knowledge Graphs for Microbial data
  • Knowledge Graph Hub concept
  • Prerequisites
  • Setup
  • Pipeline Stages:
    • Download
    • Transform
    • Merge
  • Data
• kg_microbe
  • kg_microbe package
    • Subpackages
    • Submodules
    • kg_microbe.bactotraits_to_mongo module
    • kg_microbe.download module
    • kg_microbe.query module
    • kg_microbe.run module
    • kg_microbe.transform module
    • Module contents
• Bacteria-Archaea-Traits schema
  • Classes
  • Mixins
  • Slots
  • Enums
  • Types
    • Built in
    • Defined

Indices and tables

• Index

• Module Index

• Search Page