is a Data Source.
The Biological General Repository for Interaction Datasets (BioGRID) is an open, curated database of genetic, protein, and chemical interaction data, post-translational modifications (PTMs), CRISPR screen results (ORCS), and themed curation project datasets spanning model organisms and human, freely available under the MIT License.
biomedical, proteomics, genomics, systems biology
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| biogrid.web | BioGRID Website | thebiogrid.org | GraphicalInterface | http | Web interface for browsing, searching... |
| biogrid.api | BioGRID REST API | biogridrest | ProgrammingInterface | http | REST-based web service for programmat... |
| biogrid.interactions.mitab | BIOGRID-ALL-LATEST.mitab.zip | BIOGRID-ALL-LATEST.mitab.zip | GraphProduct | psi_mi_mitab | Latest complete BioGRID interaction d... |
| biogrid.interactions.tab3 | BIOGRID-ALL-LATEST.tab3.zip | BIOGRID-ALL-LATEST.tab3.zip | GraphProduct | tsv | Latest complete BioGRID interaction d... |
| biogrid.ptm | BIOGRID-PTMS-LATEST.ptm.zip | BIOGRID-PTMS-LATEST.ptm.zip | GraphProduct | tsv | Post-translational modification (PTM)... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| kg-monarch.graph | KGX Distribution of KG-Monarch | monarch-kg.tar.gz (220.2 MB) | GraphProduct | kgx | KGX Distribution of KG-Monarch |
| kg-monarch.graph.jsonl | KGX JSON-L Distribution of KG-Monarch | monarch-kg.jsonl.tar.gz (301.0 MB) | GraphProduct | kgx-jsonl | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.rdf | RDF Distribution of KG-Monarch | monarch-kg.nt.gz (838.5 MB) | GraphProduct | rdfxml | RDF Distribution of KG-Monarch |
| kg-monarch.graph.neo4j | Neo4j Dump of KG-Monarch | monarch-kg.neo4j.dump (1.3 GB) | GraphProduct | ❔ | Neo4j Dump of KG-Monarch |
| kg-monarch.graph.duckdb | DuckDB database of KG-Monarch | monarch-kg.duckdb (6.4 GB) | GraphProduct | ❔ | DuckDB database of KG-Monarch |
| kg-monarch.graph.jsonl.edges | KGX JSON-L Distribution of KG-Monarch Edges | monarch-kg_edges.jsonl (14.2 GB) | GraphProduct | kgx-jsonl | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.jsonl.nodes | KGX JSON-L Distribution of KG-Monarch Nodes | monarch-kg_nodes.jsonl (1.1 GB) | GraphProduct | kgx-jsonl | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.neo4j.edges | Neo4j Dump of KG-Monarch Edges | monarch-kg_edges.neo4j.csv (4.1 GB) | GraphProduct | neo4j | Neo4j Dump of KG-Monarch Edges |
| kg-monarch.graph.neo4j.nodes | Neo4j Dump of KG-Monarch Nodes | monarch-kg_nodes.neo4j.csv (333.4 MB) | GraphProduct | neo4j | Neo4j Dump of KG-Monarch Nodes |
Created: August 13, 2025 | Last modified: August 23, 2025