is a Ontology.
It is part of the Obo-foundry collection.
A structured classification of molecular entities of biological interest focusing on 'small' chemical compounds.
chemistry and biochemistry
Unknown
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| chebi.owl | chebi.owl | chebi.owl | OntologyProduct | owl | Chemical Entities of Biological Inter... |
| chebi.obo | chebi.obo | chebi.obo | OntologyProduct | obo | Chemical Entities of Biological Inter... |
| chebi.owl.gz | chebi, compressed owl | chebi.owl.gz (59.9 MB) | OntologyProduct | owl | chebi, compressed owl |
| chebi.chebi_lite.obo | chebi_lite, no syns or xrefs | chebi_lite.obo | OntologyProduct | obo | chebi_lite, no syns or xrefs |
| chebi.chebi_core.obo | chebi_core, no xrefs | chebi_core.obo | OntologyProduct | obo | chebi_core, no xrefs |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| ubkg.neo4j | UBKG Neo4j Docker Distribution | ubkg-downloads.xconsortia.org | GraphProduct | ❔ | Turnkey neo4j distributions that depl... |
| ubkg.csv | UBKG Ontology CSV Files | ubkg-downloads.xconsortia.org | GraphProduct | csv | Ontology CSV files that can be import... |
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | ❔ | Network embeddings of the Bioteque gr... |
| pheknowlator.graph | PheKnowLator graph | knowledge_graphs?pageState=(%22StorageObjectListTable%22:(%22f%22:%22%255B%255D%22))&inv=1&invt=Ab5_1Q&project=pheknowlator | GraphProduct | owl | PheKnowLator graph files, including s... |
| mechreponet.kg | MechRepoNet Knowledge Graph | publication | ❔ | The MechRepoNet knowledge graph in it... | |
| rna-kg.kg.neo4j | RNA-KG Neo4j Dump | rnakgv20.dump (3.7 GB) | GraphProduct | neo4j | RNA-KG as a Neo4j Dump |
| rna-kg.kg.nodes | RNA-KG Nodes | nodes.csv (4.1 GB) | GraphProduct | csv | RNA-KG Nodes in CSV format |
| rna-kg.kg.edges | RNA-KG Edges | edges.csv (17.1 GB) | GraphProduct | csv | RNA-KG Edges in CSV format |
| rtx-kg2.graph.nodes | RTX-KG2.10.1c KGX JSONL Nodes | kg2c-2.10.1-v1.0-nodes.jsonl.gz (359.1 MB) | GraphProduct | kgx-jsonl | Nodes for KGX distribution of the RTX... |
| rtx-kg2.graph.edges | RTX-KG2.10.1c KGX JSONL Edges | kg2c-2.10.1-v1.0-edges.jsonl.gz (1.7 GB) | GraphProduct | kgx-jsonl | Edges for KGX distribution of the RTX... |
| rtx-kg2.neo4j | RTX-KG2 Neo4j | arax.ncats.io | ProgrammingInterface | ❔ | Neo4j distribution of the RTX-KG2 as ... |
| obo-db-ingest.bigg.metabolite.sssom.tsv | bigg.metabolite SSSOM | bigg.metabolite.sssom.tsv (391.1 KB) | MappingProduct | sssom | bigg.metabolite SSSOM |
| microbiomekg.api | MicrobiomeKG Plover API | mbkp | ProgrammingInterface | http | TRAPI web API for querying MicrobiomeKG |
| drugmechdb.graph | DrugMechDB Graph Dataset | zenodo.8139357 | GraphProduct | mixed | Curated mechanistic drug–disease path... |
| drug-approvals-kp.graph.nodes | Drug Approvals KP Graph Nodes | drug_approvals_kg_nodes_v0.3.9.tsv (685.0 KB) | GraphProduct | kgx | Nodes for the Drug Approvals KP, v0.3.9 |
| drug-approvals-kp.graph.edges | Drug Approvals KP Graph Edges | drug_approvals_kg_edges_v0.3.9.tsv (29.6 MB) | GraphProduct | kgx | Edges for the Drug Approvals KP, v0.3.9 |
| efo.owl | EFO OWL | efo.owl (229.5 MB) | OntologyProduct | owl | The latest release of EFO in OWL format |
| efo.obo | EFO OBO | efo.obo (61.1 MB) | OntologyProduct | obo | The latest release of EFO in OBO format |
| to-basic.obo | Plant Trait Ontology Basic OBO | to-basic.obo (109.4 KB) | DataModelProduct | obo | The Basic subset of the Plant Trait O... |