is an Aggregator.
DISEASES is a weekly updated database that integrates evidence on disease-gene associations from automatic text mining, manually curated literature, cancer mutation data, and genome-wide association studies. It provides confidence scores to facilitate comparison of different types and sources of evidence.
health, genomics, biomedical, literature
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infores:diseases
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| diseases.portal | DISEASES Web Search | diseases.jensenlab.org | GraphicalInterface | http | Web search interface for querying hum... |
| diseases.textmining-full | Text Mining Channel (Full) | human_disease_textmining_full.tsv (1.8 GB) | Product | tsv | Disease-gene associations from text m... |
| diseases.textmining-filtered | Text Mining Channel (Filtered) | human_disease_textmining_filtered.tsv (46.4 MB) | Product | tsv | Disease-gene associations from text m... |
| diseases.knowledge-full | Knowledge Channel (Full) | human_disease_knowledge_full.tsv (6.6 MB) | Product | tsv | Disease-gene associations from manual... |
| diseases.knowledge-filtered | Knowledge Channel (Filtered) | human_disease_knowledge_filtered.tsv (588.0 KB) | Product | tsv | Disease-gene associations from manual... |
| diseases.experiments-full | Experiments Channel (Full) | human_disease_experiments_full.tsv (25.7 MB) | Product | tsv | Disease-gene associations from experi... |
| diseases.experiments-filtered | Experiments Channel (Filtered) | human_disease_experiments_filtered.tsv (2.4 MB) | Product | tsv | Disease-gene associations from experi... |
| diseases.integrated-full | Integrated Channel (Full) | human_disease_integrated_full.tsv (618.3 MB) | Product | tsv | Experimental integrated channel combi... |
| diseases.dictionary | DISEASES Dictionary | diseases_dictionary.tar.gz (15.2 MB) | Product | ❔ | Dictionary of human gene and disease ... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | Neo4j database dump of the Clinical K... |
| cancer-genome-interpreter.clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | Neo4j database dump of the Clinical K... |
| spoke.graph | SPOKE Graph | ❔ | GraphProduct | ❔ | The SPOKE knowledge graph containing ... |