is a Ontology.
It is part of the OBO Foundry collection.
An ontology for describing the function of genes and gene products
infores:go
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| go.owl | GO (OWL edition) | go.owl (123.7 MB) | Ontology | owl | The main ontology in OWL. This is sel... |
| go.obo | GO (OBO Format edition) | go.obo (34.9 MB) | Ontology | obo | Equivalent to go.owl, in obo format |
| go.json | GO (JSON edition) | go.json | Ontology | json | Equivalent to go.owl, in obograph jso... |
| go.extensions.go-plus.owl | GO-Plus | go-plus.owl (225.5 MB) | Ontology | owl | The main ontology plus axioms connect... |
| go.extensions.go-plus.json | GO-Plus | go-plus.json | Ontology | json | As go-plus.owl, in obographs json format |
| go.go-base.owl | GO Base Module | go-base.owl (153.5 MB) | Ontology | owl | The main ontology plus axioms connect... |
| go.go-basic.obo | GO-Basic, Filtered, for use with legacy tools | go-basic.obo (30.6 MB) | Ontology | obo | Basic version of the GO, filtered suc... |
| go.go-basic.json | GO-Basic, Filtered, for use with legacy tools (JSON) | go-basic.json | Ontology | json | As go-basic.obo, in json format |
| go.extensions.go-taxon-subsets.owl | GO Taxon Subsets | go-taxon-subsets.owl (5.7 KB) | Ontology | owl | Classes added to ncbitaxon for taxon ... |
| go.snapshot.go.owl | GO (OWL edition), daily snapshot release | go.owl (123.9 MB) | Ontology | owl | Equivalent to go.owl, but released da... |
| go.snapshot.go.obo | GO (OBO Format edition), daily snapshot release | go.obo (35.0 MB) | Ontology | obo | Equivalent to go.owl, but released da... |
| go.amigo | AmiGO 2 | amigo | Graphical Interface | http | Official GO browser for ontology term... |
| go.api | Gene Ontology API | api.geneontology.org | Programming Interface | http | Official Gene Ontology API for term, ... |
| go.gocams.ttl | GO-CAM TTL Archive | pathway-like_go-cams.tar.gz (3.1 MB) | Graph | ttl | Pathway-like GO-CAM causal activity m... |
| go.extensions.go-taxon-groupings.owl | GO Taxon Groupings | go-taxon-groupings.owl | Ontology | owl | Classes added to ncbitaxon for groupi... |
| go.kg-bioportal | GO KGX graph (KG-Bioportal) | GO.tar.gz (3.6 MB) | Graph | kgx | KGX TSV transform of Gene Ontology (G... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| goa.quickgo | QuickGO Browser | QuickGO | Graphical Interface | http | had primary source | Browser for searching and viewing Gen... |
| goa.ftp | GOA FTP Site | goa | Product | http | had primary source | FTP site containing current and archi... |
| goa.uniprot | UniProt GOA Annotations | UNIPROT | Product | txt | had primary source | GO annotations for all UniProtKB entries |
| goa.human | Human GOA Annotations | HUMAN | Product | txt | had primary source | GO annotations for human proteins |
| goa.mouse | Mouse GOA Annotations | MOUSE | Product | txt | had primary source | GO annotations for mouse proteins |
| goa.mapping-files | GO Mapping Files | external2go | Mapping | txt | had primary source | Files containing transitive assignmen... |
| goa.pdb | PDB GOA Annotations | PDB | Product | txt | had primary source | GO annotations for PDB entries |
| goa.proteomes | Proteomes GOA Annotations | proteomes | Product | txt | had primary source | GO annotations organized by proteomes |
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | mixed | had primary source | Network embeddings of the Bioteque gr... |
| kg-monarch.graph | KGX Distribution of KG-Monarch | monarch-kg.tar.gz (220.2 MB) | Graph | kgx | had primary source | KGX Distribution of KG-Monarch |
| kg-monarch.graph.jsonl | KGX JSON-L Distribution of KG-Monarch | monarch-kg.jsonl.tar.gz (301.0 MB) | Graph | kgx-jsonl | had primary source | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.rdf | RDF Distribution of KG-Monarch | monarch-kg.nt.gz (838.5 MB) | Graph | rdfxml | had primary source | RDF Distribution of KG-Monarch |
| kg-monarch.graph.neo4j | Neo4j Dump of KG-Monarch | monarch-kg.neo4j.dump (1.3 GB) | Graph | neo4j | had primary source | Neo4j Dump of KG-Monarch |
| kg-monarch.graph.duckdb | DuckDB database of KG-Monarch | monarch-kg.duckdb (6.4 GB) | Graph | mixed | had primary source | DuckDB database of KG-Monarch |
| kg-monarch.graph.jsonl.edges | KGX JSON-L Distribution of KG-Monarch Edges | monarch-kg.jsonl.tar.gz (465.3 MB) | Graph | kgx-jsonl | had primary source | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.jsonl.nodes | KGX JSON-L Distribution of KG-Monarch Nodes | monarch-kg.jsonl.tar.gz (465.3 MB) | Graph | kgx-jsonl | had primary source | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.neo4j.edges | Neo4j Dump of KG-Monarch Edges | monarch-kg_edges.neo4j.csv (4.1 GB) | Graph | neo4j | had primary source | Neo4j Dump of KG-Monarch Edges |
| kg-monarch.graph.neo4j.nodes | Neo4j Dump of KG-Monarch Nodes | monarch-kg_nodes.neo4j.csv (333.4 MB) | Graph | neo4j | had primary source | Neo4j Dump of KG-Monarch Nodes |
| alzkb.browser | AlzKB Graph Database Browser | login | Graphical Interface | http | had primary source | A browser interface for a knowledge g... |
| alzkb.data | AlzKB Data Release (Version 2.0.0) | v2.0.0 | Graph | mixed | had primary source | Memgraph data release for AlzKB. |
| kg-microbe.graph.raw | KG-Microbe KGX Graph - Raw | latest | Graph | kgx | had primary source | Raw source files for all KG-Microbe f... |
| kg-microbe.graph.core | KG-Microbe KGX Graph - Core | latest | Graph | kgx | had primary source | The core KG KG-Microbe-Core with onto... |
| kg-microbe.graph.biomedical | KG-Microbe KGX Graph - Biomedical | latest | Graph | kgx | had primary source | Core plus human biomedical data (onto... |
| kg-microbe.graph.function | KG-Microbe KGX Graph - Function | latest | Graph | kgx | had primary source | Core plus Uniprot genome annotations |
| kg-microbe.graph.biomedical-function | KG-Microbe KGX Graph - Biomedical-Function | KGMicrobe-biomedical-function-20250222.tar.gz (4.3 GB) | Graph | kgx | had primary source | Biomedical plus Uniprot genome annota... |
| unibiomap.links | UniBioMap Graph Links | unibiomap.links.csv (1.3 GB) | Graph | csv | had primary source | Core UniBioMap graph edges file. |
| unibiomap.auxs | UniBioMap Graph Auxiliaries | unibiomap.auxs.tsv (563.9 MB) | Graph | tsv | had primary source | Auxiliary UniBioMap graph annotations... |
| unibiomap.pred | UniBioMap Predicted Graph | unibiomap.pred.csv (2.3 GB) | Graph | csv | had primary source | Predicted UniBioMap graph edges with ... |
| unibiomap.pred.full | UniBioMap Predicted Graph (Full) | unibiomap.pred.full.csv (5.9 GB) | Graph | csv | had primary source | Full unfiltered UniBioMap predicted g... |
| efo.owl | EFO OWL | efo.owl (229.5 MB) | Ontology | owl | had primary source | The latest release of EFO in OWL format |
| efo.obo | EFO OBO | efo.obo (61.1 MB) | Ontology | obo | had primary source | The latest release of EFO in OBO format |
| spoke.graph | SPOKE Graph | data-tools | Graph | http | had primary source | The SPOKE knowledge graph containing ... |
| indra.cogex.code | INDRA CoGEx Build Code | indra_cogex | Process | python | had primary source | INDRA CoGEx is a graph database integ... |
| obo-db-ingest.bigg.compartment.sssom.tsv | bigg.compartment SSSOM | bigg.compartment.sssom.tsv (242 B) | Mapping | sssom | had primary source | bigg.compartment SSSOM |
| string.protein.links | STRING Protein Links | protein.links.v12.0.txt.gz (128.7 GB) | Graph | txt | had primary source | protein network data (full network, s... |
| string.protein.links.detailed | STRING Protein Links Detailed | protein.links.detailed.v12.0.txt.gz (189.6 GB) | Graph | txt | had primary source | protein network data (full network, i... |
| string.protein.links.full | STRING Protein Links Full | protein.links.full.v12.0.txt.gz (199.6 GB) | Graph | txt | had primary source | protein network data (full network, i... |
| string.protein.physical.links | STRING Protein Physical Links | protein.physical.links.v12.0.txt.gz (11.1 GB) | Graph | txt | had primary source | protein network data (physical subnet... |
| string.protein.physical.links.detailed | STRING Protein Physical Links Detailed | protein.physical.links.detailed.v12.0.txt.gz (13.8 GB) | Graph | txt | had primary source | protein network data (physical subnet... |
| string.protein.physical.links.full | STRING Protein Physical Links Full | protein.physical.links.full.v12.0.txt.gz (14.5 GB) | Graph | txt | had primary source | protein network data (physical subnet... |
| string.cog.links | STRING COG Links | COG.links.v12.0.txt.gz (176.8 MB) | Graph | txt | had primary source | association scores between orthologou... |
| string.cog.links.detailed | STRING COG Links Detailed | COG.links.detailed.v12.0.txt.gz (238.7 MB) | Graph | txt | had primary source | association scores (incl. subscores p... |
| string.database | STRING Database Network Schema | network_schema.v12.0.sql.gz (262.2 GB) | Graph | postgres | had primary source | full database, part II: the networks ... |
| mechreponet.kg | MechRepoNet Knowledge Graph | publication | Product | mixed | had primary source | The MechRepoNet knowledge graph in it... |
| microbiomekg.api | MicrobiomeKG Plover TRAPI API | mbkp | Programming Interface | http | had primary source | Plover-hosted TRAPI web API for query... |
| pheknowlator.graph | PheKnowLator graph | knowledge_graphs?pageState=(%22StorageObjectListTable%22:(%22f%22:%22%255B%255D%22))&inv=1&invt=Ab5_1Q&project=pheknowlator | Graph | owl | had primary source | PheKnowLator graph files, including s... |
| cancer-genome-interpreter.clinicalkg.graph | CKG Graph Dump | 1 | Graph | mixed | had primary source | Neo4j database dump of the Clinical K... |
| clinicalkg.graph | CKG Graph Dump | 1 | Graph | mixed | had primary source | Neo4j database dump of the Clinical K... |
| ckg.graph | CKG Graph Database Dump | 1 | Graph | neo4j | had primary source | Graph database dump and additional re... |
| cam-kp.go-cams | Gene Ontology CAMs | noctua-models | Product | ttl | had primary source | Gene Ontology Causal Activity Model (... |
| rtx-kg2.graph.nodes | RTX-KG2.10.1c KGX JSONL Nodes | kg2c-2.10.1-v1.0-nodes.jsonl.gz (359.1 MB) | Graph | kgx-jsonl | had primary source | Nodes for KGX distribution of the RTX... |
| rtx-kg2.graph.edges | RTX-KG2.10.1c KGX JSONL Edges | kg2c-2.10.1-v1.0-edges.jsonl.gz (1.7 GB) | Graph | kgx-jsonl | had primary source | Edges for KGX distribution of the RTX... |
| rtx-kg2.neo4j | RTX-KG2 Neo4j | arax.ncats.io | Programming Interface | http | had primary source | Neo4j distribution of the RTX-KG2 as ... |
| rna-kg.kg.neo4j | RNA-KG Neo4j Dump | rnakgv20.dump (3.7 GB) | Graph | neo4j | had primary source | RNA-KG as a Neo4j Dump |
| rna-kg.kg.nodes | RNA-KG Nodes | nodes.csv (4.1 GB) | Graph | csv | had primary source | RNA-KG Nodes in CSV format |
| rna-kg.kg.edges | RNA-KG Edges | edges.csv (17.1 GB) | Graph | csv | had primary source | RNA-KG Edges in CSV format |
| drugmechdb.graph | DrugMechDB Graph Dataset | zenodo.8139357 | Graph | mixed | had primary source | Curated mechanistic drug–disease path... |
| orkg.dump | ORKG RDF Dump | rdf-export-orkg.nt (613.1 MB) | Graph | ntriples | had primary source | RDF dump of the Open Research Knowled... |
| chr.model.owl | Monochrom Ontology OWL release | chr.owl (100.0 KB) | Ontology | owl | had primary source | OWL release of Monochrom Ontology |
| genecards.gene.ontology ⚠ | GeneCards Gene Ontology Annotations | www.genecards.org | Product | http | had primary source | Gene ontology annotations from the Ge... |
| interpro.interpro2go | InterPro to GO Mappings | interpro2go (2.9 MB) | Mapping | tsv | had primary source | Mappings between InterPro entries and... |
| ncbigene.gene2go | Gene to GO Mapping | gene2go.gz (1.2 GB) | Mapping | tsv | had primary source | Gene to Gene Ontology mapping data pr... |
| prokn.go.goterm.is_a.goterm.edges | ProKN GO Term Hierarchy Edges | GO.GOTerm.IS_A.GOTerm.edges.csv (11.4 MB) | Graph | csv | had primary source | GO term hierarchy edges |
| prokn.go.protein.acts_upstream_of.goterm.edges | ProKN GO Acts Upstream Of Edges | GO.Protein.ACTS_UPSTREAM_OF.GOTerm.edges.csv (155.2 KB) | Graph | csv | had primary source | GO protein acts upstream of GO term e... |
| prokn.go.protein.acts_upstream_of_negative_effect.goterm.edges | ProKN GO Acts Upstream Negative Edges | GO.Protein.ACTS_UPSTREAM_OF_NEGATIVE_EFFECT.GOTerm.edges.csv (10.2 KB) | Graph | csv | had primary source | GO protein acts upstream of negative ... |
| prokn.go.protein.acts_upstream_of_or_within.goterm.edges | ProKN GO Acts Upstream Or Within Edges | GO.Protein.ACTS_UPSTREAM_OF_OR_WITHIN.GOTerm.edges.csv (697.6 KB) | Graph | csv | had primary source | GO protein acts upstream of or within... |
| prokn.go.protein.acts_upstream_of_or_within_negative_effect.goterm.edges | ProKN GO Acts Upstream Or Within Negative Edges | GO.Protein.ACTS_UPSTREAM_OF_OR_WITHIN_NEGATIVE_EFFECT.GOTerm.edges.csv (4.2 KB) | Graph | csv | had primary source | GO protein acts upstream of or within... |
| prokn.go.protein.acts_upstream_of_or_within_positive_effect.goterm.edges | ProKN GO Acts Upstream Or Within Positive Edges | GO.Protein.ACTS_UPSTREAM_OF_OR_WITHIN_POSITIVE_EFFECT.GOTerm.edges.csv (13.6 KB) | Graph | csv | had primary source | GO protein acts upstream of or within... |
| prokn.go.protein.acts_upstream_of_positive_effect.goterm.edges | ProKN GO Acts Upstream Positive Edges | GO.Protein.ACTS_UPSTREAM_OF_POSITIVE_EFFECT.GOTerm.edges.csv (31.8 KB) | Graph | csv | had primary source | GO protein acts upstream of positive ... |
| prokn.go.protein.colocalizes_with.goterm.edges | ProKN GO Colocalizes Edges | GO.Protein.COLOCALIZES_WITH.GOTerm.edges.csv (255.4 KB) | Graph | csv | had primary source | GO protein colocalizes with GO term e... |
| prokn.go.protein.contributes_to.goterm.edges | ProKN GO Contributes To Edges | GO.Protein.CONTRIBUTES_TO.GOTerm.edges.csv (303.3 KB) | Graph | csv | had primary source | GO protein contributes to GO term edges |
| prokn.go.protein.enables.goterm.edges | ProKN GO Enables Edges | GO.Protein.ENABLES.GOTerm.edges.csv (50.7 MB) | Graph | csv | had primary source | GO protein enables GO term edges |
| prokn.go.protein.involved_in.goterm.edges | ProKN GO Involved In Edges | GO.Protein.INVOLVED_IN.GOTerm.edges.csv (41.4 MB) | Graph | csv | had primary source | GO protein involved in GO term edges |
| prokn.go.protein.is_active_in.goterm.edges | ProKN GO Active In Edges | GO.Protein.IS_ACTIVE_IN.GOTerm.edges.csv (1.6 MB) | Graph | csv | had primary source | GO protein active in GO term edges |
| prokn.go.protein.located_in.goterm.edges | ProKN GO Located In Edges | GO.Protein.LOCATED_IN.GOTerm.edges.csv (48.4 MB) | Graph | csv | had primary source | GO protein located in GO term edges |
| prokn.go.protein.not_acts_upstream_of_or_within.goterm.edges | ProKN GO Not Acts Upstream Or Within Edges | GO.Protein.NOT_ACTS_UPSTREAM_OF_OR_WITHIN.GOTerm.edges.csv (1.8 KB) | Graph | csv | had primary source | GO protein not acts upstream of or wi... |
| prokn.go.protein.not_acts_upstream_of_or_within_negative_effect.goterm.edges | ProKN GO Not Acts Upstream Negative Edges | GO.Protein.NOT_ACTS_UPSTREAM_OF_OR_WITHIN_NEGATIVE_EFFECT.GOTerm.edges.csv (455 B) | Graph | csv | had primary source | GO protein not acts upstream of or wi... |
| prokn.go.protein.not_colocalizes_with.goterm.edges | ProKN GO Not Colocalizes Edges | GO.Protein.NOT_COLOCALIZES_WITH.GOTerm.edges.csv (3.3 KB) | Graph | csv | had primary source | GO protein not colocalizes with GO te... |
| prokn.go.protein.not_contributes_to.goterm.edges | ProKN GO Not Contributes Edges | GO.Protein.NOT_CONTRIBUTES_TO.GOTerm.edges.csv (3.1 KB) | Graph | csv | had primary source | GO protein not contributes to GO term... |
| prokn.go.protein.not_enables.goterm.edges | ProKN GO Not Enables Edges | GO.Protein.NOT_ENABLES.GOTerm.edges.csv (126.7 KB) | Graph | csv | had primary source | GO protein not enables GO term edges |
| prokn.go.protein.not_involved_in.goterm.edges | ProKN GO Not Involved In Edges | GO.Protein.NOT_INVOLVED_IN.GOTerm.edges.csv (139.8 KB) | Graph | csv | had primary source | GO protein not involved in GO term edges |
| prokn.go.protein.not_is_active_in.goterm.edges | ProKN GO Not Active In Edges | GO.Protein.NOT_IS_ACTIVE_IN.GOTerm.edges.csv (893 B) | Graph | csv | had primary source | GO protein not active in GO term edges |
| prokn.go.protein.not_located_in.goterm.edges | ProKN GO Not Located In Edges | GO.Protein.NOT_LOCATED_IN.GOTerm.edges.csv (51.5 KB) | Graph | csv | had primary source | GO protein not located in GO term edges |
| prokn.go.protein.not_part_of.goterm.edges | ProKN GO Not Part Of Edges | GO.Protein.NOT_PART_OF.GOTerm.edges.csv (4.6 KB) | Graph | csv | had primary source | GO protein not part of GO term edges |
| prokn.go.protein.part_of.goterm.edges | ProKN GO Part Of Edges | GO.Protein.PART_OF.GOTerm.edges.csv (3.5 MB) | Graph | csv | had primary source | GO protein part of GO term edges |
| swisslipid.go | SwissLipids GO Annotations | file.php?cas=download_files&file=go.tsv (47.3 KB) | Product | tsv | had primary source | TSV export of SwissLipids links to Ge... |
| unibiomap.go_desc ⚠ | UniBioMap GO Descriptions | go_desc.json | Graph | json | had primary source | UniBioMap Gene Ontology entity descri... |
| oma.mapping.go | OMA to GO Mapping | oma-go.txt.gz | Mapping | tsv | had primary source | Mapping of OMA identifiers to Gene On... |
| reactome.go-associations.txt | Reactome Gene Association File | gene_association.reactome.gz (815.7 KB) | Product | txt | had primary source | Gene association file for Reactome GO... |
| reactome.pathways.go-terms.txt | Reactome Pathways to GO Terms | Pathways2GoTerms_human.txt (59.2 KB) | Product | txt | had primary source | Mapping from Reactome pathways to Gen... |
| enrichr-kg.graph | Enrichr-KG Neo4j Database | enrichr-kg-042123.dump (498.0 MB) | Graph | neo4j | had primary source | Neo4j graph database integrating Enri... |
| enrichr-kg.edges-csv | Enrichr-KG Edge CSV Snapshot | GO_Biological_Process_2021.GO_BP.Gene.edges.csv (33.5 MB) | Product | csv | had primary source | Edge-table CSV snapshot from the Enri... |
| genophenoenvo-kg.data | GenoPhenoEnvo KG Data | genophenoenvo | Graph | kgx | had primary source | Merged knowledge graph data files con... |
| hetionet.neo4j | Hetionet v1.0 Neo4j Database | browser | Graphical Interface | http | had primary source | Browser for complete Hetionet v1.0 gr... |
| hetionet.data.json | Hetionet v1.0 JSON | hetionet-v1.0.json.bz2 (131 B) | Graph | json | had primary source | Hetionet v1.0 in JSON format |
| hetionet.data.neo4j | Hetionet v1.0 Neo4j | hetionet-v1.0.db.tar.bz2 (132 B) | Graph | neo4j | had primary source | Hetionet v1.0 as a Neo4j database |
| hetionet.data.edges | Hetionet v1.0 edges (SIF) | hetionet-v1.0-edges.sif.gz (131 B) | Graph | sif | had primary source | Hetionet v1.0 as SIF edges |
| hetionet.data.nodes | Hetionet v1.0 nodes (TSV) | hetionet-v1.0-nodes.tsv (417.1 KB) | Graph | tsv | had primary source | Hetionet v1.0 as TSV nodes |
| hetionet.hetnetpy | hetnetpy | hetnetpy | Process | python | had primary source | Python package for creating, querying... |
| hetionet.search | Hetnet Connectivity Search | search | Graphical Interface | http | had primary source | Web application to search and explore... |
| lncrnalyzr.graph | lncRNAlyzr Knowledge Graph | lncRNAlyzr | Graph | neo4j | had primary source | Neo4j knowledge graph containing lncR... |
| medkg.site | MedKG Site | medkg | Graphical Interface | http | had primary source | Graphical interface for MedKG |
| oregano.graph | OREGANO Knowledge Graph | Graphs | Graph | http | was derived from | The OREGANO knowledge graph dataset i... |
| pharmebinet.json | PharMeBINet JSON Release | content (1.8 GB) | Graph | json | was derived from | PharMeBINet V2 JSON release published... |
| pharmebinet.tsv | PharMeBINet TSV Release | content (1.8 GB) | Graph | tsv | was derived from | PharMeBINet V2 TSV release published ... |
| pharmebinet.graphml | PharMeBINet GraphML Release | content (1.9 GB) | Graph | mixed | was derived from | PharMeBINet V2 GraphML release publis... |
| pharmebinet.neo4j | PharMeBINet Neo4j Database | content (3.6 GB) | Graph | neo4j | was derived from | PharMeBINet V2 Neo4j database release... |
| pharmebinet.neo4j.dump | PharMeBINet Neo4j Dump | content (3.4 GB) | Graph | neo4j | was derived from | PharMeBINet V2 Neo4j dump release pub... |
| disprot.downloads | DisProt Downloads | download | Product | json | was informed by | Bulk download of DisProt data in mult... |
| disprot.idpo | IDP Ontology (IDPO) | IDPO_v0.3.0.owl (49.8 KB) | Ontology | owl | was informed by | IDP Ontology (IDPO) for representing ... |
| humannet.network | HumanNet Network File | HumanNet-XC.tsv.gz (11.7 MB) | Graph | tsv | was derived from | HumanNet-XC v3 functional gene networ... |
| humannet.network.symbol | HumanNet Network File (Gene Symbols) | HumanNet-XC.symbol.tsv.gz (13.3 MB) | Graph | tsv | was derived from | HumanNet-XC v3 functional gene networ... |
| kg-predict.gpkg | GP-KG Knowledge Graph Data | GP_KG.txt (46.2 MB) | Graph | tsv | was derived from | GP-KG tab-delimited knowledge graph c... |
| msigdb.downloads.human ⚠ | MSigDB Human Gene Sets Downloads | downloads.jsp#msigdb | Product | mixed | used | Downloadable gene set files in GMT, X... |
| msigdb.downloads.mouse ⚠ | MSigDB Mouse Gene Sets Downloads | downloads.jsp#msigdb | Product | mixed | used | Downloadable gene set files for mouse... |
| openpredict.api | OpenPredict API | docs | Programming Interface | http | used | TRAPI 1.4 API for predicted drug trea... |
| openpredict.predictions ⚠ | OpenPredict Prediction Data | docs | Product | mixed | used | Pre-computed prediction outputs expos... |
| harmonizome.downloads | Harmonizome Downloads | download | Product | mixed | was derived from | Harmonizome 3.0 processed dataset dow... |
| harmonizome.kg-neo4j | Harmonizome Knowledge Graph Neo4j Database | harmonizome-kg.maayanlab.cloud | Graph | neo4j | was derived from | Neo4j knowledge graph serialization o... |
| biobtree.api | BioBTree REST API | api | Programming Interface | http | had primary source | REST API for searching identifiers an... |
| genecards.web.interface | GeneCards Web Interface | www.genecards.org | Graphical Interface | http | had primary source | Web-based interface for searching and... |
| biobtree.graph.human-subgraph | BioBTree Knowledge Graph - Human Subgraph (KGX) | 20816742 | Graph | kgx | had primary source | Human-scoped, Neo4j-ready subgraph of... |
| eco-kg.graph | eco-KG Graph | eco-kg | Graph | kgx | had primary source | Knowledge graph containing plant trai... |
| genomickb.graph | GenomicKB Graph Dump | genomickb-a-knowledgebase-for-the-human-genome | Graph | http | had primary source | GenomicKB 1.0 Neo4j Database Dump (Re... |
| gp-kg.graph | GP-KG | GP_KG.txt (46.2 MB) | Graph | txt | was derived from | GP_KG.txt |
| kg-covid-19.graph ⚠ | KG-COVID-19 graph | kg-covid-19 | Graph | kgx | had primary source | KGX nodes and edges for KG-COVID-19 |
| kg-idg.graph ⚠ | KGX Distribution of KG-IDG | kg-idg.tar.gz | Graph | kgx | had primary source | KGX Distribution of KG-IDG |
| np-kg.graph.tsv | NP-KG TSV | NP-KG_v3.0.0.tsv?download=1 (1.0 GB) | Graph | tsv | had primary source | Merged KG with ontology-grounded KG a... |
| np-kg.graph.networkx | NP-KG gpickle | NP-KG_v3.0.0.gpickle?download=1 (892.7 MB) | Graph | mixed | had primary source | Merged KG with ontology-grounded KG a... |
| primekg.graph ⚠ | PrimeKG Full Dataset | 6180620 | Graph | csv | had primary source | The full PrimeKG dataset containing d... |
| sri-reference-kg.graph | SRI-Reference KG (KGX distribution) | monarch-kg.tar.gz (219.4 MB) | Graph | kgx | had primary source | KGX distribution of the SRI-Reference KG |
| ncatsgardkg.graph | NCATS GARD Knowledge Graph | processed | Graph | http | was influenced by | Integrated rare-disease knowledge gra... |
| spoke-okn.graph | SPOKE-OKN Graph | spoke.ucsf.edu | Graph | ttl | was influenced by | The SPOKE-OKN knowledge graph, an OKN... |
| ctd.chem_go_enriched | CTD Chemical-GO Enriched Associations | CTD_chem_go_enriched.tsv.gz (137.7 MB) | Product | tsv | was derived from | Gene Ontology terms statistically enr... |
| ctd.pheno_term_ixns | CTD Chemical-Phenotype Interactions | CTD_pheno_term_ixns.tsv.gz (22.9 MB) | Product | tsv | was derived from | Curated chemical-phenotype interactio... |
| ctd.phenotype_disease_bp | CTD Phenotype-Disease Inference Network (Biological Process) | CTD_Phenotype-Disease_biological_process_associations.tsv.gz (48.0 MB) | Product | tsv | was derived from | Inferred associations between Gene On... |
| ctd.phenotype_disease_cc | CTD Phenotype-Disease Inference Network (Cellular Component) | CTD_Phenotype-Disease_cellular_component_associations.tsv.gz (3.0 MB) | Product | tsv | was derived from | Inferred associations between Gene On... |
| ctd.phenotype_disease_mf | CTD Phenotype-Disease Inference Network (Molecular Function) | CTD_Phenotype-Disease_molecular_function_associations.tsv.gz (5.2 MB) | Product | tsv | was derived from | Inferred associations between Gene On... |
The Gene Ontology (GO) is a consortium-maintained ontology and knowledge resource for describing gene product function across species. It organizes biology into molecular function, biological process, and cellular component terms, and supports a large ecosystem of annotation, browsing, download, and programmatic access services.
This page focuses on official GO products: ontology releases, GO Consortium browsers and APIs, GO annotation download surfaces, and GO-CAM causal activity model distributions. It does not enumerate downstream third-party knowledge graphs that merely ingest GO.
Use AmiGO and QuickGO for browsing, the GO API for programmatic access, OBO PURLs for ontology files, and the GOA / current release download directories for annotation and GO-CAM artifacts.
This resource was automatically synchronized from the OBO Foundry registry and then curated with additional GO Consortium access points.
Created: March 16, 2025 | Last modified: September 23, 2026