is a Ontology.
It is part of the OBO Foundry collection.
An ontology for describing the function of genes and gene products
biomedical, biological systems
infores:go
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| go.owl | GO (OWL edition) | go.owl (123.7 MB) | OntologyProduct | owl | The main ontology in OWL. This is sel... |
| go.obo | GO (OBO Format edition) | go.obo (34.9 MB) | OntologyProduct | obo | Equivalent to go.owl, in obo format |
| go.json ⚠ | GO (JSON edition) | go.json | OntologyProduct | json | Equivalent to go.owl, in obograph jso... |
| go.extensions.go-plus.owl | GO-Plus | go-plus.owl (225.5 MB) | OntologyProduct | owl | The main ontology plus axioms connect... |
| go.extensions.go-plus.json ⚠ | GO-Plus | go-plus.json | OntologyProduct | json | As go-plus.owl, in obographs json format |
| go.go-base.owl | GO Base Module | go-base.owl (153.5 MB) | OntologyProduct | owl | The main ontology plus axioms connect... |
| go.go-basic.obo | GO-Basic, Filtered, for use with legacy tools | go-basic.obo (30.6 MB) | OntologyProduct | obo | Basic version of the GO, filtered suc... |
| go.go-basic.json ⚠ | GO-Basic, Filtered, for use with legacy tools (JSON) | go-basic.json | OntologyProduct | json | As go-basic.obo, in json format |
| go.extensions.go-taxon-groupings.owl ⚠ | GO Taxon Groupings | go-taxon-groupings.owl | OntologyProduct | owl | Classes added to ncbitaxon for groupi... |
| go.snapshot.go.owl | GO (OWL edition), daily snapshot release | go.owl (123.9 MB) | OntologyProduct | owl | Equivalent to go.owl, but released da... |
| go.snapshot.go.obo | GO (OBO Format edition), daily snapshot release | go.obo (35.0 MB) | OntologyProduct | obo | Equivalent to go.owl, but released da... |
| go.amigo | AmiGO 2 | amigo | GraphicalInterface | http | Official GO browser for ontology term... |
| go.api | Gene Ontology API | api.geneontology.org | ProgrammingInterface | http | Official Gene Ontology API for term, ... |
| go.gocams.ttl | GO-CAM TTL Archive | pathway-like_go-cams.tar.gz (3.1 MB) | GraphProduct | ttl | Pathway-like GO-CAM causal activity m... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| goa.quickgo | QuickGO Browser | QuickGO | GraphicalInterface | http | had primary source | Browser for searching and viewing Gen... |
| goa.ftp ⚠ | GOA FTP Site | goa | Product | http | had primary source | FTP site containing current and archi... |
| goa.uniprot ⚠ | UniProt GOA Annotations | UNIPROT | Product | txt | had primary source | GO annotations for all UniProtKB entries |
| goa.human ⚠ | Human GOA Annotations | HUMAN | Product | txt | had primary source | GO annotations for human proteins |
| goa.mouse ⚠ | Mouse GOA Annotations | MOUSE | Product | txt | had primary source | GO annotations for mouse proteins |
| goa.mapping-files ⚠ | GO Mapping Files | external2go | MappingProduct | txt | had primary source | Files containing transitive assignmen... |
| goa.pdb ⚠ | PDB GOA Annotations | PDB | Product | txt | had primary source | GO annotations for PDB entries |
| goa.proteomes ⚠ | Proteomes GOA Annotations | proteomes | Product | txt | had primary source | GO annotations organized by proteomes |
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | ❔ | had primary source | Network embeddings of the Bioteque gr... |
| kg-monarch.graph | KGX Distribution of KG-Monarch | monarch-kg.tar.gz (220.2 MB) | GraphProduct | kgx | had primary source | KGX Distribution of KG-Monarch |
| kg-monarch.graph.jsonl | KGX JSON-L Distribution of KG-Monarch | monarch-kg.jsonl.tar.gz (301.0 MB) | GraphProduct | kgx-jsonl | had primary source | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.rdf | RDF Distribution of KG-Monarch | monarch-kg.nt.gz (838.5 MB) | GraphProduct | rdfxml | had primary source | RDF Distribution of KG-Monarch |
| kg-monarch.graph.neo4j | Neo4j Dump of KG-Monarch | monarch-kg.neo4j.dump (1.3 GB) | GraphProduct | ❔ | had primary source | Neo4j Dump of KG-Monarch |
| kg-monarch.graph.duckdb | DuckDB database of KG-Monarch | monarch-kg.duckdb (6.4 GB) | GraphProduct | ❔ | had primary source | DuckDB database of KG-Monarch |
| kg-monarch.graph.jsonl.edges | KGX JSON-L Distribution of KG-Monarch Edges | monarch-kg_edges.jsonl (14.2 GB) | GraphProduct | kgx-jsonl | had primary source | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.jsonl.nodes | KGX JSON-L Distribution of KG-Monarch Nodes | monarch-kg_nodes.jsonl (1.1 GB) | GraphProduct | kgx-jsonl | had primary source | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.neo4j.edges | Neo4j Dump of KG-Monarch Edges | monarch-kg_edges.neo4j.csv (4.1 GB) | GraphProduct | neo4j | had primary source | Neo4j Dump of KG-Monarch Edges |
| kg-monarch.graph.neo4j.nodes | Neo4j Dump of KG-Monarch Nodes | monarch-kg_nodes.neo4j.csv (333.4 MB) | GraphProduct | neo4j | had primary source | Neo4j Dump of KG-Monarch Nodes |
| alzkb.browser | AlzKB Graph Database Browser | login | GraphicalInterface | http | had primary source | A browser interface for a knowledge g... |
| alzkb.data | AlzKB Data Release (Version 2.0.0) | v2.0.0 | GraphProduct | ❔ | had primary source | Memgraph data release for AlzKB. |
| kg-microbe.graph.raw | KG-Microbe KGX Graph - Raw | KGMicrobe-raw-20250222.tar.gz (11.6 GB) | GraphProduct | kgx | had primary source | Raw source files for all KG-Microbe f... |
| kg-microbe.graph.core | KG-Microbe KGX Graph - Core | latest | GraphProduct | kgx | had primary source | The core KG KG-Microbe-Core with onto... |
| kg-microbe.graph.biomedical | KG-Microbe KGX Graph - Biomedical | latest | GraphProduct | kgx | had primary source | Core plus human biomedical data (onto... |
| kg-microbe.graph.function | KG-Microbe KGX Graph - Function | KGMicrobe-function-20250222.tar.gz (4.3 GB) | GraphProduct | kgx | had primary source | Core plus Uniprot genome annotations |
| kg-microbe.graph.biomedical-function | KG-Microbe KGX Graph - Biomedical-Function | KGMicrobe-biomedical-function-20250222.tar.gz (4.3 GB) | GraphProduct | kgx | had primary source | Biomedical plus Uniprot genome annota... |
| unibiomap.links | UniBioMap Graph Links | unibiomap.links.csv (1.3 GB) | GraphProduct | csv | had primary source | Core UniBioMap graph edges file. |
| unibiomap.auxs | UniBioMap Graph Auxiliaries | unibiomap.auxs.tsv (563.9 MB) | GraphProduct | tsv | had primary source | Auxiliary UniBioMap graph annotations... |
| unibiomap.pred | UniBioMap Predicted Graph | unibiomap.pred.csv (2.3 GB) | GraphProduct | csv | had primary source | Predicted UniBioMap graph edges with ... |
| unibiomap.pred.full | UniBioMap Predicted Graph (Full) | unibiomap.pred.full.csv (5.9 GB) | GraphProduct | csv | had primary source | Full unfiltered UniBioMap predicted g... |
| efo.owl | EFO OWL | efo.owl (229.5 MB) | OntologyProduct | owl | had primary source | The latest release of EFO in OWL format |
| efo.obo | EFO OBO | efo.obo (61.1 MB) | OntologyProduct | obo | had primary source | The latest release of EFO in OBO format |
| spoke.graph | SPOKE Graph | ❔ | GraphProduct | ❔ | had primary source | The SPOKE knowledge graph containing ... |
| indra.cogex.code | INDRA CoGEx Build Code | indra_cogex | ProcessProduct | ❔ | had primary source | INDRA CoGEx is a graph database integ... |
| obo-db-ingest.bigg.compartment.sssom.tsv | bigg.compartment SSSOM | bigg.compartment.sssom.tsv (242 B) | MappingProduct | sssom | had primary source | bigg.compartment SSSOM |
| string.protein.links | STRING Protein Links | protein.links.v12.0.txt.gz (128.7 GB) | GraphProduct | txt | had primary source | protein network data (full network, s... |
| string.protein.links.detailed | STRING Protein Links Detailed | protein.links.detailed.v12.0.txt.gz (189.6 GB) | GraphProduct | txt | had primary source | protein network data (full network, i... |
| string.protein.links.full | STRING Protein Links Full | protein.links.full.v12.0.txt.gz (199.6 GB) | GraphProduct | txt | had primary source | protein network data (full network, i... |
| string.protein.physical.links | STRING Protein Physical Links | protein.physical.links.v12.0.txt.gz (11.1 GB) | GraphProduct | txt | had primary source | protein network data (physical subnet... |
| string.protein.physical.links.detailed | STRING Protein Physical Links Detailed | protein.physical.links.detailed.v12.0.txt.gz (13.8 GB) | GraphProduct | txt | had primary source | protein network data (physical subnet... |
| string.protein.physical.links.full | STRING Protein Physical Links Full | protein.physical.links.full.v12.0.txt.gz (14.5 GB) | GraphProduct | txt | had primary source | protein network data (physical subnet... |
| string.cog.links | STRING COG Links | COG.links.v12.0.txt.gz (176.8 MB) | GraphProduct | txt | had primary source | association scores between orthologou... |
| string.cog.links.detailed | STRING COG Links Detailed | COG.links.detailed.v12.0.txt.gz (238.7 MB) | GraphProduct | txt | had primary source | association scores (incl. subscores p... |
| string.database | STRING Database Network Schema | network_schema.v12.0.sql.gz (262.2 GB) | GraphProduct | ❔ | had primary source | full database, part II: the networks ... |
| mechreponet.kg | MechRepoNet Knowledge Graph | publication | ❔ | had primary source | The MechRepoNet knowledge graph in it... | |
| microbiomekg.api | MicrobiomeKG Plover API | mbkp | ProgrammingInterface | http | had primary source | TRAPI web API for querying MicrobiomeKG |
| pheknowlator.graph | PheKnowLator graph | knowledge_graphs?pageState=(%22StorageObjectListTable%22:(%22f%22:%22%255B%255D%22))&inv=1&invt=Ab5_1Q&project=pheknowlator | GraphProduct | owl | had primary source | PheKnowLator graph files, including s... |
| cancer-genome-interpreter.clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | had primary source | Neo4j database dump of the Clinical K... |
| clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | had primary source | Neo4j database dump of the Clinical K... |
| ckg.graph | CKG Graph Database Dump | 1 | GraphProduct | neo4j | had primary source | Graph database dump and additional re... |
| cam-kp.go-cams | Gene Ontology CAMs | ❔ | Product | ❔ | had primary source | Gene Ontology Causal Activity Model (... |
| rtx-kg2.graph.nodes | RTX-KG2.10.1c KGX JSONL Nodes | kg2c-2.10.1-v1.0-nodes.jsonl.gz (359.1 MB) | GraphProduct | kgx-jsonl | had primary source | Nodes for KGX distribution of the RTX... |
| rtx-kg2.graph.edges | RTX-KG2.10.1c KGX JSONL Edges | kg2c-2.10.1-v1.0-edges.jsonl.gz (1.7 GB) | GraphProduct | kgx-jsonl | had primary source | Edges for KGX distribution of the RTX... |
| rtx-kg2.neo4j | RTX-KG2 Neo4j | arax.ncats.io | ProgrammingInterface | ❔ | had primary source | Neo4j distribution of the RTX-KG2 as ... |
| rna-kg.kg.neo4j | RNA-KG Neo4j Dump | rnakgv20.dump (3.7 GB) | GraphProduct | neo4j | had primary source | RNA-KG as a Neo4j Dump |
| rna-kg.kg.nodes | RNA-KG Nodes | nodes.csv (4.1 GB) | GraphProduct | csv | had primary source | RNA-KG Nodes in CSV format |
| rna-kg.kg.edges | RNA-KG Edges | edges.csv (17.1 GB) | GraphProduct | csv | had primary source | RNA-KG Edges in CSV format |
| drugmechdb.graph | DrugMechDB Graph Dataset | zenodo.8139357 | GraphProduct | mixed | had primary source | Curated mechanistic drug–disease path... |
| orkg.dump | ORKG RDF Dump | dump (613.1 MB) | GraphProduct | ntriples | had primary source | RDF dump of the Open Research Knowled... |
| chr.model.owl | Monochrom Ontology OWL release | chr.owl (100.0 KB) | OntologyProduct | owl | had primary source | OWL release of Monochrom Ontology |
| genecards.gene.ontology ⚠ | GeneCards Gene Ontology Annotations | www.genecards.org | Product | http | had primary source | Gene ontology annotations from the Ge... |
| proteomehd.data | ProteomeHD Data | Data | GraphProduct | ❔ | had primary source | ProteomeHD data files |
| interpro.interpro2go | InterPro to GO Mappings | interpro2go (2.9 MB) | MappingProduct | tsv | had primary source | Mappings between InterPro entries and... |
| ncbigene.gene2go | Gene to GO Mapping | gene2go.gz (1.1 GB) | MappingProduct | tsv | had primary source | Gene to Gene Ontology mapping data pr... |
| prokn.go.goterm.is_a.goterm.edges | ProKN GO Term Hierarchy Edges | GO.GOTerm.IS_A.GOTerm.edges.csv (11.4 MB) | GraphProduct | csv | had primary source | GO term hierarchy edges |
| prokn.go.protein.acts_upstream_of.goterm.edges | ProKN GO Acts Upstream Of Edges | GO.Protein.ACTS_UPSTREAM_OF.GOTerm.edges.csv (155.2 KB) | GraphProduct | csv | had primary source | GO protein acts upstream of GO term e... |
| prokn.go.protein.acts_upstream_of_negative_effect.goterm.edges | ProKN GO Acts Upstream Negative Edges | GO.Protein.ACTS_UPSTREAM_OF_NEGATIVE_EFFECT.GOTerm.edges.csv (10.2 KB) | GraphProduct | csv | had primary source | GO protein acts upstream of negative ... |
| prokn.go.protein.acts_upstream_of_or_within.goterm.edges | ProKN GO Acts Upstream Or Within Edges | GO.Protein.ACTS_UPSTREAM_OF_OR_WITHIN.GOTerm.edges.csv (697.6 KB) | GraphProduct | csv | had primary source | GO protein acts upstream of or within... |
| prokn.go.protein.acts_upstream_of_or_within_negative_effect.goterm.edges | ProKN GO Acts Upstream Or Within Negative Edges | GO.Protein.ACTS_UPSTREAM_OF_OR_WITHIN_NEGATIVE_EFFECT.GOTerm.edges.csv (4.2 KB) | GraphProduct | csv | had primary source | GO protein acts upstream of or within... |
| prokn.go.protein.acts_upstream_of_or_within_positive_effect.goterm.edges | ProKN GO Acts Upstream Or Within Positive Edges | GO.Protein.ACTS_UPSTREAM_OF_OR_WITHIN_POSITIVE_EFFECT.GOTerm.edges.csv (13.6 KB) | GraphProduct | csv | had primary source | GO protein acts upstream of or within... |
| prokn.go.protein.acts_upstream_of_positive_effect.goterm.edges | ProKN GO Acts Upstream Positive Edges | GO.Protein.ACTS_UPSTREAM_OF_POSITIVE_EFFECT.GOTerm.edges.csv (31.8 KB) | GraphProduct | csv | had primary source | GO protein acts upstream of positive ... |
| prokn.go.protein.colocalizes_with.goterm.edges | ProKN GO Colocalizes Edges | GO.Protein.COLOCALIZES_WITH.GOTerm.edges.csv (255.4 KB) | GraphProduct | csv | had primary source | GO protein colocalizes with GO term e... |
| prokn.go.protein.contributes_to.goterm.edges | ProKN GO Contributes To Edges | GO.Protein.CONTRIBUTES_TO.GOTerm.edges.csv (303.3 KB) | GraphProduct | csv | had primary source | GO protein contributes to GO term edges |
| prokn.go.protein.enables.goterm.edges | ProKN GO Enables Edges | GO.Protein.ENABLES.GOTerm.edges.csv (50.7 MB) | GraphProduct | csv | had primary source | GO protein enables GO term edges |
| prokn.go.protein.involved_in.goterm.edges | ProKN GO Involved In Edges | GO.Protein.INVOLVED_IN.GOTerm.edges.csv (41.4 MB) | GraphProduct | csv | had primary source | GO protein involved in GO term edges |
| prokn.go.protein.is_active_in.goterm.edges | ProKN GO Active In Edges | GO.Protein.IS_ACTIVE_IN.GOTerm.edges.csv (1.6 MB) | GraphProduct | csv | had primary source | GO protein active in GO term edges |
| prokn.go.protein.located_in.goterm.edges | ProKN GO Located In Edges | GO.Protein.LOCATED_IN.GOTerm.edges.csv (48.4 MB) | GraphProduct | csv | had primary source | GO protein located in GO term edges |
| prokn.go.protein.not_acts_upstream_of_or_within.goterm.edges | ProKN GO Not Acts Upstream Or Within Edges | GO.Protein.NOT_ACTS_UPSTREAM_OF_OR_WITHIN.GOTerm.edges.csv (1.8 KB) | GraphProduct | csv | had primary source | GO protein not acts upstream of or wi... |
| prokn.go.protein.not_acts_upstream_of_or_within_negative_effect.goterm.edges | ProKN GO Not Acts Upstream Negative Edges | GO.Protein.NOT_ACTS_UPSTREAM_OF_OR_WITHIN_NEGATIVE_EFFECT.GOTerm.edges.csv (455 B) | GraphProduct | csv | had primary source | GO protein not acts upstream of or wi... |
| prokn.go.protein.not_colocalizes_with.goterm.edges | ProKN GO Not Colocalizes Edges | GO.Protein.NOT_COLOCALIZES_WITH.GOTerm.edges.csv (3.3 KB) | GraphProduct | csv | had primary source | GO protein not colocalizes with GO te... |
| prokn.go.protein.not_contributes_to.goterm.edges | ProKN GO Not Contributes Edges | GO.Protein.NOT_CONTRIBUTES_TO.GOTerm.edges.csv (3.1 KB) | GraphProduct | csv | had primary source | GO protein not contributes to GO term... |
| prokn.go.protein.not_enables.goterm.edges | ProKN GO Not Enables Edges | GO.Protein.NOT_ENABLES.GOTerm.edges.csv (126.7 KB) | GraphProduct | csv | had primary source | GO protein not enables GO term edges |
| prokn.go.protein.not_involved_in.goterm.edges | ProKN GO Not Involved In Edges | GO.Protein.NOT_INVOLVED_IN.GOTerm.edges.csv (139.8 KB) | GraphProduct | csv | had primary source | GO protein not involved in GO term edges |
| prokn.go.protein.not_is_active_in.goterm.edges | ProKN GO Not Active In Edges | GO.Protein.NOT_IS_ACTIVE_IN.GOTerm.edges.csv (893 B) | GraphProduct | csv | had primary source | GO protein not active in GO term edges |
| prokn.go.protein.not_located_in.goterm.edges | ProKN GO Not Located In Edges | GO.Protein.NOT_LOCATED_IN.GOTerm.edges.csv (51.5 KB) | GraphProduct | csv | had primary source | GO protein not located in GO term edges |
| prokn.go.protein.not_part_of.goterm.edges | ProKN GO Not Part Of Edges | GO.Protein.NOT_PART_OF.GOTerm.edges.csv (4.6 KB) | GraphProduct | csv | had primary source | GO protein not part of GO term edges |
| prokn.go.protein.part_of.goterm.edges | ProKN GO Part Of Edges | GO.Protein.PART_OF.GOTerm.edges.csv (3.5 MB) | GraphProduct | csv | had primary source | GO protein part of GO term edges |
| swisslipid.go | SwissLipids GO Annotations | file.php?cas=download_files&file=go.tsv (47.3 KB) | Product | tsv | had primary source | TSV export of SwissLipids links to Ge... |
| unibiomap.go_desc ⚠ | UniBioMap GO Descriptions | go_desc.json | GraphProduct | json | had primary source | UniBioMap Gene Ontology entity descri... |
The Gene Ontology (GO) is a consortium-maintained ontology and knowledge resource for describing gene product function across species. It organizes biology into molecular function, biological process, and cellular component terms, and supports a large ecosystem of annotation, browsing, download, and programmatic access services.
This page focuses on official GO products: ontology releases, GO Consortium browsers and APIs, GO annotation download surfaces, and GO-CAM causal activity model distributions. It does not enumerate downstream third-party knowledge graphs that merely ingest GO.
Use AmiGO and QuickGO for browsing, the GO API for programmatic access, OBO PURLs for ontology files, and the GOA / current release download directories for annotation and GO-CAM artifacts.
This resource was automatically synchronized from the OBO Foundry registry and then curated with additional GO Consortium access points.
Created: March 16, 2025 | Last modified: May 23, 2026