is a Ontology.
It is part of the OBO Foundry collection.
An ontology for describing the function of genes and gene products
biomedical, biological systems
infores:go
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| go.owl | GO (OWL edition) | go.owl (123.7 MB) | OntologyProduct | owl | The main ontology in OWL. This is sel... |
| go.obo | GO (OBO Format edition) | go.obo (34.9 MB) | OntologyProduct | obo | Equivalent to go.owl, in obo format |
| go.json ⚠ | GO (JSON edition) | go.json | OntologyProduct | json | Equivalent to go.owl, in obograph jso... |
| go.extensions.go-plus.owl | GO-Plus | go-plus.owl (225.5 MB) | OntologyProduct | owl | The main ontology plus axioms connect... |
| go.go-base.owl | GO Base Module | go-base.owl (153.5 MB) | OntologyProduct | owl | The main ontology plus axioms connect... |
| go.extensions.go-plus.json ⚠ | GO-Plus | go-plus.json | OntologyProduct | json | As go-plus.owl, in obographs json format |
| go.go-basic.obo | GO-Basic, Filtered, for use with legacy tools | go-basic.obo (30.6 MB) | OntologyProduct | obo | Basic version of the GO, filtered suc... |
| go.go-basic.json ⚠ | GO-Basic, Filtered, for use with legacy tools (JSON) | go-basic.json | OntologyProduct | json | As go-basic.obo, in json format |
| go.extensions.go-taxon-groupings.owl ⚠ | GO Taxon Groupings | go-taxon-groupings.owl | OntologyProduct | owl | Classes added to ncbitaxon for groupi... |
| go.snapshot.go.owl | GO (OWL edition), daily snapshot release | go.owl (123.7 MB) | OntologyProduct | owl | Equivalent to go.owl, but released da... |
| go.snapshot.go.obo | GO (OBO Format edition), daily snapshot release | go.obo (34.9 MB) | OntologyProduct | obo | Equivalent to go.owl, but released da... |
| go.amigo | AmiGO 2 | amigo | GraphicalInterface | http | Gene Ontology web browser and search ... |
| go.api | Gene Ontology API | api.geneontology.org | ProgrammingInterface | http | Gene Ontology API for programmatic ac... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | ❔ | Network embeddings of the Bioteque gr... |
| kg-monarch.graph | KGX Distribution of KG-Monarch | monarch-kg.tar.gz (220.2 MB) | GraphProduct | kgx | KGX Distribution of KG-Monarch |
| kg-monarch.graph.jsonl | KGX JSON-L Distribution of KG-Monarch | monarch-kg.jsonl.tar.gz (301.0 MB) | GraphProduct | kgx-jsonl | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.rdf | RDF Distribution of KG-Monarch | monarch-kg.nt.gz (838.5 MB) | GraphProduct | rdfxml | RDF Distribution of KG-Monarch |
| kg-monarch.graph.neo4j | Neo4j Dump of KG-Monarch | monarch-kg.neo4j.dump (1.3 GB) | GraphProduct | ❔ | Neo4j Dump of KG-Monarch |
| kg-monarch.graph.duckdb | DuckDB database of KG-Monarch | monarch-kg.duckdb (6.4 GB) | GraphProduct | ❔ | DuckDB database of KG-Monarch |
| kg-monarch.graph.jsonl.edges | KGX JSON-L Distribution of KG-Monarch Edges | monarch-kg_edges.jsonl (14.2 GB) | GraphProduct | kgx-jsonl | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.jsonl.nodes | KGX JSON-L Distribution of KG-Monarch Nodes | monarch-kg_nodes.jsonl (1.1 GB) | GraphProduct | kgx-jsonl | KGX JSON-Lines Distribution of KG-Mon... |
| kg-monarch.graph.neo4j.edges | Neo4j Dump of KG-Monarch Edges | monarch-kg_edges.neo4j.csv (4.1 GB) | GraphProduct | neo4j | Neo4j Dump of KG-Monarch Edges |
| kg-monarch.graph.neo4j.nodes | Neo4j Dump of KG-Monarch Nodes | monarch-kg_nodes.neo4j.csv (333.4 MB) | GraphProduct | neo4j | Neo4j Dump of KG-Monarch Nodes |
| alzkb.browser | AlzKB Graph Database Browser | login | GraphicalInterface | http | A browser interface for a knowledge g... |
| alzkb.data | AlzKB Data Release (Version 2.0.0) | v2.0.0 | GraphProduct | ❔ | Memgraph data release for AlzKB. |
| kg-microbe.graph.raw | KG-Microbe KGX Graph - Raw | KGMicrobe-raw-20250222.tar.gz (11.6 GB) | GraphProduct | kgx | Raw source files for all KG-Microbe f... |
| kg-microbe.graph.core | KG-Microbe KGX Graph - Core | latest | GraphProduct | kgx | The core KG KG-Microbe-Core with onto... |
| kg-microbe.graph.biomedical | KG-Microbe KGX Graph - Biomedical | latest | GraphProduct | kgx | Core plus human biomedical data (onto... |
| kg-microbe.graph.function | KG-Microbe KGX Graph - Function | KGMicrobe-function-20250222.tar.gz (4.3 GB) | GraphProduct | kgx | Core plus Uniprot genome annotations |
| kg-microbe.graph.biomedical-function | KG-Microbe KGX Graph - Biomedical-Function | KGMicrobe-biomedical-function-20250222.tar.gz (4.3 GB) | GraphProduct | kgx | Biomedical plus Uniprot genome annota... |
| unibiomap.links | UniBioMap Graph Links | unibiomap.links.csv (1.3 GB) | GraphProduct | csv | Core UniBioMap graph edges file. |
| unibiomap.auxs | UniBioMap Graph Auxiliaries | unibiomap.auxs.tsv (563.9 MB) | GraphProduct | tsv | Auxiliary UniBioMap graph annotations... |
| unibiomap.pred | UniBioMap Predicted Graph | unibiomap.pred.csv (2.3 GB) | GraphProduct | csv | Predicted UniBioMap graph edges with ... |
| unibiomap.pred.full | UniBioMap Predicted Graph (Full) | unibiomap.pred.full.csv (5.9 GB) | GraphProduct | csv | Full unfiltered UniBioMap predicted g... |
| spoke.graph | SPOKE Graph | ❔ | GraphProduct | ❔ | The SPOKE knowledge graph containing ... |
| indra.cogex.code | INDRA CoGEx Build Code | indra_cogex | ProcessProduct | ❔ | INDRA CoGEx is a graph database integ... |
| obo-db-ingest.bigg.compartment.sssom.tsv | bigg.compartment SSSOM | bigg.compartment.sssom.tsv (242 B) | MappingProduct | sssom | bigg.compartment SSSOM |
| string.protein.links | STRING Protein Links | protein.links.v12.0.txt.gz (128.7 GB) | GraphProduct | txt | protein network data (full network, s... |
| string.protein.links.detailed | STRING Protein Links Detailed | protein.links.detailed.v12.0.txt.gz (189.6 GB) | GraphProduct | txt | protein network data (full network, i... |
| string.protein.links.full | STRING Protein Links Full | protein.links.full.v12.0.txt.gz (199.6 GB) | GraphProduct | txt | protein network data (full network, i... |
| string.protein.physical.links | STRING Protein Physical Links | protein.physical.links.v12.0.txt.gz (11.1 GB) | GraphProduct | txt | protein network data (physical subnet... |
| string.protein.physical.links.detailed | STRING Protein Physical Links Detailed | protein.physical.links.detailed.v12.0.txt.gz (13.8 GB) | GraphProduct | txt | protein network data (physical subnet... |
| string.protein.physical.links.full | STRING Protein Physical Links Full | protein.physical.links.full.v12.0.txt.gz (14.5 GB) | GraphProduct | txt | protein network data (physical subnet... |
| string.cog.links | STRING COG Links | COG.links.v12.0.txt.gz (176.8 MB) | GraphProduct | txt | association scores between orthologou... |
| string.cog.links.detailed | STRING COG Links Detailed | COG.links.detailed.v12.0.txt.gz (238.7 MB) | GraphProduct | txt | association scores (incl. subscores p... |
| string.database | STRING Database Network Schema | network_schema.v12.0.sql.gz (262.2 GB) | GraphProduct | ❔ | full database, part II: the networks ... |
| mechreponet.kg | MechRepoNet Knowledge Graph | publication | ❔ | The MechRepoNet knowledge graph in it... | |
| microbiomekg.api | MicrobiomeKG Plover API | mbkp | ProgrammingInterface | http | TRAPI web API for querying MicrobiomeKG |
| pheknowlator.graph | PheKnowLator graph | knowledge_graphs?pageState=(%22StorageObjectListTable%22:(%22f%22:%22%255B%255D%22))&inv=1&invt=Ab5_1Q&project=pheknowlator | GraphProduct | owl | PheKnowLator graph files, including s... |
| cancer-genome-interpreter.clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | Neo4j database dump of the Clinical K... |
| clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | Neo4j database dump of the Clinical K... |
| ckg.graph | CKG Graph Database Dump | 1 | GraphProduct | neo4j | Graph database dump and additional re... |
| rtx-kg2.graph.nodes | RTX-KG2.10.1c KGX JSONL Nodes | kg2c-2.10.1-v1.0-nodes.jsonl.gz (359.1 MB) | GraphProduct | kgx-jsonl | Nodes for KGX distribution of the RTX... |
| rtx-kg2.graph.edges | RTX-KG2.10.1c KGX JSONL Edges | kg2c-2.10.1-v1.0-edges.jsonl.gz (1.7 GB) | GraphProduct | kgx-jsonl | Edges for KGX distribution of the RTX... |
| rtx-kg2.neo4j | RTX-KG2 Neo4j | arax.ncats.io | ProgrammingInterface | ❔ | Neo4j distribution of the RTX-KG2 as ... |
| chr.model.owl | Monochrom Ontology OWL release | chr.owl (100.0 KB) | OntologyProduct | owl | OWL release of Monochrom Ontology |
| rna-kg.kg.neo4j | RNA-KG Neo4j Dump | rnakgv20.dump (3.7 GB) | GraphProduct | neo4j | RNA-KG as a Neo4j Dump |
| rna-kg.kg.nodes | RNA-KG Nodes | nodes.csv (4.1 GB) | GraphProduct | csv | RNA-KG Nodes in CSV format |
| rna-kg.kg.edges | RNA-KG Edges | edges.csv (17.1 GB) | GraphProduct | csv | RNA-KG Edges in CSV format |
| efo.owl | EFO OWL | efo.owl (229.5 MB) | OntologyProduct | owl | The latest release of EFO in OWL format |
| efo.obo | EFO OBO | efo.obo (61.1 MB) | OntologyProduct | obo | The latest release of EFO in OBO format |
| drugmechdb.graph | DrugMechDB Graph Dataset | zenodo.8139357 | GraphProduct | mixed | Curated mechanistic drug–disease path... |
| genecards.gene.ontology ⚠ | GeneCards Gene Ontology Annotations | www.genecards.org | Product | http | Gene ontology annotations from the Ge... |
| orkg.dump | ORKG RDF Dump | dump (613.1 MB) | GraphProduct | ntriples | RDF dump of the Open Research Knowled... |
| goa.quickgo | QuickGO Browser | QuickGO | GraphicalInterface | http | Browser for searching and viewing Gen... |
| goa.ftp ⚠ | GOA FTP Site | goa | Product | http | FTP site containing current and archi... |
| goa.uniprot ⚠ | UniProt GOA Annotations | UNIPROT | Product | txt | GO annotations for all UniProtKB entries |
| goa.human ⚠ | Human GOA Annotations | HUMAN | Product | txt | GO annotations for human proteins |
| goa.mouse ⚠ | Mouse GOA Annotations | MOUSE | Product | txt | GO annotations for mouse proteins |
| goa.mapping-files ⚠ | GO Mapping Files | external2go | MappingProduct | txt | Files containing transitive assignmen... |
| goa.pdb ⚠ | PDB GOA Annotations | PDB | Product | txt | GO annotations for PDB entries |
| goa.proteomes ⚠ | Proteomes GOA Annotations | proteomes | Product | txt | GO annotations organized by proteomes |
| proteomehd.data | ProteomeHD Data | Data | GraphProduct | ❔ | ProteomeHD data files |
| interpro.interpro2go | InterPro to GO Mappings | interpro2go (2.9 MB) | MappingProduct | tsv | Mappings between InterPro entries and... |
| ncbigene.gene2go | Gene to GO Mapping | gene2go.gz (1.1 GB) | MappingProduct | tsv | Gene to Gene Ontology mapping data pr... |
| swisslipid.go | SwissLipids GO Annotations | file.php?cas=download_files&file=go.tsv (47.3 KB) | Product | tsv | TSV export of SwissLipids links to Ge... |
| unibiomap.go_desc ⚠ | UniBioMap GO Descriptions | go_desc.json | GraphProduct | json | UniBioMap Gene Ontology entity descri... |
| cam-kp.go-cams | Gene Ontology CAMs | ❔ | Product | ❔ | Gene Ontology Causal Activity Model (... |
An ontology for describing the function of genes and gene products
The main ontology in OWL. This is self contained and does not have connections to other OBO ontologies
URL: http://purl.obolibrary.org/obo/go.owl
Format: owl
Equivalent to go.owl, in obo format
URL: http://purl.obolibrary.org/obo/go.obo
Format: obo
Equivalent to go.owl, in obograph json format
URL: http://purl.obolibrary.org/obo/go.json
Format: json
The main ontology plus axioms connecting to select external ontologies, with subsets of those ontologies
URL: http://purl.obolibrary.org/obo/go/extensions/go-plus.owl
Format: owl
The main ontology plus axioms connecting to select external ontologies, excluding the external ontologies themselves
URL: http://purl.obolibrary.org/obo/go/go-base.owl
Format: owl
As go-plus.owl, in obographs json format
URL: http://purl.obolibrary.org/obo/go/extensions/go-plus.json
Format: json
Basic version of the GO, filtered such that the graph is guaranteed to be acyclic and annotations can be propagated up the graph. The relations included are is a, part of, regulates, negatively regulates and positively regulates. This version excludes relationships that cross the 3 GO hierarchies.
URL: http://purl.obolibrary.org/obo/go/go-basic.obo
Format: obo
As go-basic.obo, in json format
URL: http://purl.obolibrary.org/obo/go/go-basic.json
Format: json
Classes added to ncbitaxon for groupings such as prokaryotes
URL: http://purl.obolibrary.org/obo/go/extensions/go-taxon-groupings.owl
Format: owl
Equivalent to go.owl, but released daily. Note the snapshot release is not archived.
URL: http://purl.obolibrary.org/obo/go/snapshot/go.owl
Format: owl
Equivalent to go.owl, but released daily. Note the snapshot release is not archived.
URL: http://purl.obolibrary.org/obo/go/snapshot/go.obo
Format: obo
Domains: biological systems
Taxon: NCBITaxon:1
This resource was automatically synchronized from the OBO Foundry registry.
Created: March 16, 2025 | Last modified: April 15, 2026