is a General purpose Resource.
SnpEff is a genetic variant annotation and functional effect prediction toolbox widely used in genomics pipelines. It annotates and predicts the effects of genetic variants on genes and proteins (such as amino acid changes), supports over 38,000 genomes, uses standardized Sequence Ontology terms, and implements the VCF annotation standard ANN field. SnpEff is bundled with SnpSift, a companion tool for filtering and manipulating genomic annotated variants. Both tools are integrated with Galaxy and GATK, making them essential components of sequencing data analysis workflows.
biomedical, genomics, precision medicine, biological systems
infores:snpeff
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| snpeff.download | SnpEff Download Package | snpEff_latest_core.zip | ProgrammingInterface | ❔ | SnpEff core package with command-line... |
| snpeff.documentation | SnpEff Documentation | introduction | GraphicalInterface | http | Comprehensive documentation website f... |
| snpeff.databases ⚠ | SnpEff Genome Databases | download | Product | ❔ | Over 38,000 pre-built genome database... |
| snpeff.github | SnpEff GitHub Repository | SnpEff | ProgrammingInterface | ❔ | SnpEff source code repository on GitHub |
| snpeff.sourceforge | SnpEff SourceForge Archive | files | Product | ❔ | Historical releases and versions of S... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| snpsift.documentation | SnpSift Documentation | introduction | GraphicalInterface | http | SnpSift documentation covering tools ... |
Created: October 31, 2025 | Last modified: October 31, 2025