aop-wiki

is a Data Source.

It is part of the AOP collection.

The AOP-Wiki is the primary collaborative authoring and curation interface for the Adverse Outcome Pathway Knowledge Base (AOP-KB). It enables the community to develop, review, browse, and export Adverse Outcome Pathways (AOPs) linking molecular initiating events through key events to adverse outcomes relevant to human and ecological risk assessment. Structured exports (XML and tabular subsets) support computational toxicology, ontology mapping, and integration into predictive assessment workflows.

Domains

License

Varies

Homepage

aop-wiki

Repository

Unknown

Infores ID

Unknown

FAIRsharing ID

Unknown

Product Summary

Products

From this Resource
ID Name URL Category Format Description
aop-wiki.portal AOP-Wiki Portal aopwiki.org GraphicalInterface http Web portal for browsing, authoring, a...
aop-wiki.quarterly-xml AOP-Wiki Quarterly XML Snapshot downloads Product xml Quarterly permanent XML snapshot (ver...
aop-wiki.nightly-xml AOP-Wiki Nightly XML Export aop-wiki-xml.gz (9.5 MB) Product xml Nightly XML export (rolling) containi...
aop-wiki.ke-overview AOP-Wiki Key Events TSV aop_ke_mie_ao.tsv (232.5 KB) Product tsv Tab-delimited subset listing AOP to K...
aop-wiki.ker AOP-Wiki Key Event Relationships TSV aop_ke_ker.tsv (185.0 KB) Product tsv Tab-delimited subset listing Key Even...
aop-wiki.ke-components AOP-Wiki Key Event Components TSV aop_ke_ec.tsv (284.3 KB) Product tsv Tab-delimited subset of Key Event Com...
aop-wiki.dynamic-aop-xml AOP-Wiki Dynamic AOP XML Feed aops Product xml Per-AOP dynamic XML feed accessible v...
aop-wiki.devhandbook AOP Developers' Handbook 4 DocumentationProduct http This document is the AOP Developers' ...
From other Resources
ID Name URL Category Format Description
aop-db.data AOP-DB Data adverse-outcome-pathway-database-aop-db-version-2 Product The EPA has developed the Adverse Out...

Details

AOP-Wiki

Overview

The AOP-Wiki is the collaborative platform of the Adverse Outcome Pathway Knowledge Base (AOP-KB). It captures structured mechanistic knowledge describing how molecular initiating events propagate through measurable key events to adverse outcomes of regulatory relevance. The resource supports transparent evidence organization, peer review, and reuse across chemical safety evaluation, risk prioritization, and method development.

Data & Exports

Multiple export modalities enable programmatic reuse:

  • Quarterly XML snapshots (stable, citable)
  • Nightly rolling XML (latest content)
  • Dynamic XML feed per AOP (on-demand freshness)
  • Targeted TSV subsets (key events, key event relationships, key event components)

Use Cases

  • Mechanistic evidence mapping and visualization
  • Integrating AOP structures into predictive toxicology pipelines
  • Identifying knowledge gaps in AOP development
  • Ontology alignment and cross-resource linking

Governance & Community

Content is community-authored and coordinated via the AOP-Wiki Coordination Group with international participation (academia, government, and NGOs). Peer review pathways align with OECD processes for AOP endorsement.

Access Notes

Dynamic per-AOP XML feeds are obtained directly from individual AOP pages (XML button). Nightly and quarterly exports plus TSV subsets are documented on the Download Options page.

Citation

When reusing AOP-Wiki content, cite the AOP-Wiki (access date), relevant quarterly snapshot (if used), and any underlying ontologies or complementary resources referenced in analyses.

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Created: September 04, 2025 | Last modified: September 04, 2025