automat

is an Aggregator.

It is part of the Translator collection.

A RENCI service that proxies Plater-based TRAPI endpoints for individual knowledge graphs (such as the ROBOKOP KG, Ubergraph, CAM-KP and COHD) and publishes per-source knowledge graphs, built with ORION, as KGX downloads. Part of NCATS Biomedical Data Translator.

Domains

biomedical

Homepage

automat

Repository

GitHub

External IDs

No external IDs available

Product Summary

Contacts

Products

From this Resource
ID Name URL Category Format Description
automat.robokopkg robokopkg 4901b2bc764444ea Graph kgx-jsonl Robokop KG (Automat)
automat.robokopplus robokopplus kgx_files Graph kgx-jsonl Robokop Plus: the ROBOKOP KG extended...
automat.biolink biolink_automat 329f8c92051c18d4 Graph kgx-jsonl Biolink Automat: graph based on the M...
automat.ctd ctd_automat f92c663160ec5e36 Graph kgx-jsonl CTD Automat
automat.drugcentral drugcentral_automat dec0617490b49c7a Graph kgx-jsonl DrugCentral Automat
automat.gtex gtex_automat a6448b9092bb81a1 Graph kgx-jsonl GTEx Automat
automat.gtopdb gtopdb_automat 0ea6074c824c2236 Graph kgx-jsonl GtoPdb Automat
automat.gwascatalog gwascatalog_automat e30aceb322a33462 Graph kgx-jsonl GWASCatalog Automat
automat.hetio hetio_automat 85a5f53e63150e1e Graph kgx-jsonl Hetio Automat
automat.hgnc hgnc_automat dee31cfce74e5944 Graph kgx-jsonl HGNC Automat
automat.hmdb hmdb_automat 6715124699b6dbf0 Graph kgx-jsonl HMDB Automat
automat.humangoa humangoa_automat 06f107a4e9e8e547 Graph kgx-jsonl HumanGOA Automat
automat.intact intact_automat e5b936f966a02c2c Graph kgx-jsonl IntAct Automat
automat.panther panther_automat c0189f14ba41da6c Graph kgx-jsonl PANTHER Automat
automat.pharos pharos_automat d3068b509bf17ff3 Graph kgx-jsonl PHAROS Automat
automat.stringdb stringdb_automat 4ca5a0ce557e2c18 Graph kgx-jsonl STRING-DB Automat
automat.ubergraph ubergraph_automat e6b3204fd3a04413 Graph kgx-jsonl UberGraph Automat
automat.binding BINDING_Automat BINDING_Automat Graph kgx-jsonl BindingDB Automat: per-source KGX kno...
automat.camkp CAMKP_Automat CAMKP_Automat Graph kgx-jsonl CAM-KP Automat: per-source KGX knowle...
automat.cohd COHD_Automat COHD_Automat Graph kgx-jsonl COHD Automat: per-source KGX knowledg...
automat.ctkp CTKP_Automat CTKP_Automat Graph kgx-jsonl Clinical Trials KP Automat: per-sourc...
automat.ehr-clinical-connections EHR_Clinical_Connections_Automat EHR_Clinical_Connections_Automat Graph kgx-jsonl EHR Clinical Connections Automat: per...
automat.maytreatkp MayTreatKP_Automat MayTreatKP_Automat Graph kgx-jsonl EHR May Treat KP Automat: per-source ...
automat.alliance-orthologs GenomeAllianceOrthologs_Automat GenomeAllianceOrthologs_Automat Graph kgx-jsonl Alliance of Genome Resources Ortholog...
automat.molepro MolePro_Automat MolePro_Automat Graph kgx-jsonl MolePro Automat: per-source KGX knowl...
automat.reactome Reactome_Automat Reactome_Automat Graph kgx-jsonl Reactome Automat: per-source KGX know...
automat.tmkp TMKP_Automat TMKP_Automat Graph kgx-jsonl Text Mining KP Automat: per-source KG...
automat.viralproteome ViralProteome_Automat ViralProteome_Automat Graph kgx-jsonl Viral Proteome Automat: per-source KG...
automat.cebs CEBS_Automat CEBS_Automat Graph kgx-jsonl CEBS Automat: per-source KGX knowledg...
automat.ohd-carolina OHD_Carolina_Automat OHD_Carolina_Automat Graph kgx-jsonl OHD Carolina Automat: per-source KGX ...
From other Resources
ID Name URL Category Format Relation Description
ohd-carolina.trapi OHD@Carolina Automat TRAPI API docs Programming Interface http had primary source Automat TRAPI endpoint for OHD@Caroli...

Details

A Translator Knowledge Provider offering multiple sub-graphs in KGX format.

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Created: March 09, 2025 | Last modified: October 04, 2026