is a Data Source.
It is part of the BER collection.
BiGG Models is a knowledgebase of genome-scale metabolic network reconstructions.
systems biology, pathways, information technology, metabolism
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| obo-db-ingest.bigg.compartment.obo | bigg.compartment OBO | bigg.compartment.obo (1.0 KB) | Product | obo | had primary source | bigg.compartment OBO |
| obo-db-ingest.bigg.compartment.owl | bigg.compartment OWL | bigg.compartment.owl (1.4 KB) | Product | owl | had primary source | bigg.compartment OWL |
| obo-db-ingest.bigg.compartment.json | bigg.compartment OBO Graph JSON | bigg.compartment.json (1.1 KB) | Product | json | had primary source | bigg.compartment OBO Graph JSON |
| obo-db-ingest.bigg.compartment.sssom.tsv | bigg.compartment SSSOM | bigg.compartment.sssom.tsv (242 B) | Mapping | sssom | had primary source | bigg.compartment SSSOM |
| obo-db-ingest.bigg.metabolite.obo | bigg.metabolite OBO | bigg.metabolite.obo (574.6 KB) | Product | obo | had primary source | bigg.metabolite OBO |
| obo-db-ingest.bigg.metabolite.owl | bigg.metabolite OWL | bigg.metabolite.owl (740.1 KB) | Product | owl | had primary source | bigg.metabolite OWL |
| obo-db-ingest.bigg.metabolite.json | bigg.metabolite OBO Graph JSON | bigg.metabolite.json (1001.2 KB) | Product | json | had primary source | bigg.metabolite OBO Graph JSON |
| obo-db-ingest.bigg.metabolite.sssom.tsv | bigg.metabolite SSSOM | bigg.metabolite.sssom.tsv (391.1 KB) | Mapping | sssom | had primary source | bigg.metabolite SSSOM |
| obo-db-ingest.bigg.model.obo | bigg.model OBO | bigg.model.obo (2.7 KB) | Product | obo | had primary source | bigg.model OBO |
| obo-db-ingest.bigg.model.owl | bigg.model OWL | bigg.model.owl (3.6 KB) | Product | owl | had primary source | bigg.model OWL |
| obo-db-ingest.bigg.model.json | bigg.model OBO Graph JSON | bigg.model.json (2.4 KB) | Product | json | had primary source | bigg.model OBO Graph JSON |
| obo-db-ingest.bigg.reaction.obo | bigg.reaction OBO | bigg.reaction.obo (1.1 MB) | Product | obo | had primary source | bigg.reaction OBO |
| obo-db-ingest.bigg.reaction.owl | bigg.reaction OWL | bigg.reaction.owl (1.7 MB) | Product | owl | had primary source | bigg.reaction OWL |
| obo-db-ingest.bigg.reaction.json | bigg.reaction OBO Graph JSON | bigg.reaction.json (2.2 MB) | Product | json | had primary source | bigg.reaction OBO Graph JSON |
| obo-db-ingest.bigg.reaction.sssom.tsv | bigg.reaction SSSOM | bigg.reaction.sssom.tsv (452.1 KB) | Mapping | sssom | had primary source | bigg.reaction SSSOM |
| obo-db-ingest.bigg.compartment.tsv | bigg.compartment Nodes TSV | bigg.compartment.tsv (297 B) | Product | tsv | had primary source | bigg.compartment Nodes TSV |
| obo-db-ingest.bigg.metabolite.tsv | bigg.metabolite Nodes TSV | bigg.metabolite.tsv (260.4 KB) | Product | tsv | had primary source | bigg.metabolite Nodes TSV |
| obo-db-ingest.bigg.model.tsv | bigg.model Nodes TSV | bigg.model.tsv (1.1 KB) | Product | tsv | had primary source | bigg.model Nodes TSV |
| obo-db-ingest.bigg.reaction.tsv | bigg.reaction Nodes TSV | bigg.reaction.tsv (579.3 KB) | Product | tsv | had primary source | bigg.reaction Nodes TSV |
| molepro.graph.nodes | Nodes for Molecular Data KP | nodes.tsv (3.4 GB) | Graph | kgx | had primary source | KGX nodes for Molecular Data KP |
| molepro.graph.edges | Edges for Molecular Data KP | edges.tsv (18.8 GB) | Graph | kgx | had primary source | KGX edges for Molecular Data KP |
| molepro.api | MolePro API | api | Programming Interface | http | had primary source | MolePro API providing access to the k... |
| molepro.trapi | MolePro TRAPI Interface | ui | Programming Interface | http | had primary source | TRAPI-compliant interface for MolePro... |
| molepro.catalog | MolePro Knowledge Sources Catalog | transformers (2.0 MB) | Product | json | had primary source | Catalog of MolePro knowledge sources ... |
BiGG Models is a knowledgebase of genome-scale metabolic network reconstructions.
Created: March 09, 2025 | Last modified: September 23, 2026