is a Data Model.
Entity and association taxonomy and datamodel for life-sciences data
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| biolink.docs | Biolink Model Documentation | biolink-model | Documentation | http | Biolink Model Documentation |
| biolink.infores.docs | Information Resource Registry Model Documentation | information-resource-registry | Documentation | http | Information Resource Registry Model d... |
| biolink.model.owl | Biolink Model OWL release | biolink-model.owl.ttl (700.2 KB) | Data Model | owl | OWL release of Biolink Model |
| biolink.model.json | Biolink Model JSON release | biolink-model.json (135.0 KB) | Data Model | json | JSON schema release of Biolink Model |
| biolink.model.proto | Biolink Model Protobuf release | biolink_model.proto (18.2 KB) | Data Model | protobuf | Protobuf release of Biolink Model |
| biolink.model.shacl | Biolink Model SHACL release | biolink_model.shacl.ttl (157.4 KB) | Data Model | shacl | SHACL release of Biolink Model |
| biolink.model.shex | Biolink Model ShEx release | biolink_model.shex (17.4 KB) | Data Model | shex | ShEx release of Biolink Model |
| biolink.kg-bioportal | BIOLINK KGX graph (KG-Bioportal) | BIOLINK.tar.gz (31.8 KB) | Graph | kgx | KGX TSV transform of Biolink Model (B... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| automat.biolink | biolink_automat | 329f8c92051c18d4 | Graph | kgx-jsonl | had primary source | Biolink Automat |
| cpathkg.code | C-Path Knowledge Graph Integration | c-path-knowledge-graph-integration | Process | python | had primary source | This repository is a code reference f... |
| mechreponet.kg | MechRepoNet Knowledge Graph | publication | Product | mixed | had primary source | The MechRepoNet knowledge graph in it... |
| microbiomekg.api | MicrobiomeKG Plover TRAPI API | mbkp | Programming Interface | http | had primary source | Plover-hosted TRAPI web API for query... |
| omnicorp.cooccurrence | OmniCorp Co-occurrence Data | OmniCorp | Product | mixed | used | Co-occurrence database generated from... |
| omnicorp.api ⚠ | OmniCorp API | OmniCorp | Programming Interface | http | used | API behavior documented for adding co... |
| openpredict.api | OpenPredict API | docs | Programming Interface | http | used | TRAPI 1.4 API for predicted drug trea... |
Entity and association taxonomy and datamodel for life-sciences data.
Created: March 09, 2025 | Last modified: August 06, 2026