is a Knowledge Graph.
A knowledge graph of biological entities and their associations that integrates and formats biomedical data as pre-calculated knowledge graph embeddings
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | ❔ | Network embeddings of the Bioteque gr... |
| bioteque.code | Bioteque code | bioteque | ProcessProduct | ❔ | Scripts used to preprocess and accomm... |
| bioteque.bqsupports | BQsupports | bqsupports | ProcessProduct | ❔ | BQsupports is a tool to uncover biome... |
Bioteque is a knowledge graph that integrates multiple biomedical data sources into a comprehensive resource for biomedical research. It combines various types of biomedical data, including:
The knowledge graph is structured around biological entities and their associations, with nodes representing entities (compounds, genes, diseases, etc.) and edges representing relationships between them. These relationships include regulatory interactions, physical interactions, genetic interactions, and other biological associations.
A key feature of Bioteque is the provision of pre-calculated knowledge graph embeddings. These embeddings represent the biological entities and their associations in a continuous vector space, allowing for computational analyses such as:
The embeddings are available for download and can be used for various computational biology applications without the need to process the raw data or construct the knowledge graph from scratch.
Bioteque integrates data from over 35 different biomedical resources, including:
This integration provides a unified view of biomedical knowledge that can be accessed through the Bioteque portal or used programmatically through the available embeddings.
Created: March 09, 2025 | Last modified: September 10, 2025