is an Aggregator.
circBase is a database and exploration portal for circular RNAs (circRNAs), aggregating published circRNA detection datasets across multiple species, tissues, and experimental conditions, and providing search, genomic context, expression summaries, and downloadable data plus scripts for circRNA discovery.
genomics, biological systems, organisms
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| circbase.portal | circBase Portal | www.circbase.org | GraphicalInterface | ❔ | Web interface for searching and brows... |
| circbase.downloads | circBase Bulk Downloads | downloads.cgi | Product | ❔ | Bulk data downloads (BED/GFF and sequ... |
| circbase.docs | circBase Documentation | help_mod.html | DocumentationProduct | ❔ | Help and documentation describing cir... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| rna-kg.kg.neo4j | RNA-KG Neo4j Dump | rnakgv20.dump (3.7 GB) | GraphProduct | neo4j | RNA-KG as a Neo4j Dump |
| rna-kg.kg.nodes | RNA-KG Nodes | nodes.csv (4.1 GB) | GraphProduct | csv | RNA-KG Nodes in CSV format |
| rna-kg.kg.edges | RNA-KG Edges | edges.csv (17.1 GB) | GraphProduct | csv | RNA-KG Edges in CSV format |
Created: August 25, 2025 | Last modified: September 16, 2025