clue

is a Data Source.

CLUE (formerly known as the Connectivity Map or CMap 2.0) is a comprehensive resource for connecting drugs, genes, and diseases through large-scale perturbational data. Built and maintained by the Broad Institute, CLUE provides access to over 1.3 million gene expression profiles from the LINCS L1000 assay, covering more than 42,000 perturbagens (drugs, genetic reagents, and other compounds) tested across multiple cell lines. The platform enables researchers to discover connections between diseases, drugs, and biological mechanisms through gene expression signatures.

Domains

drug discovery, genomics, biomedical, systems biology

License

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Homepage

clue

Repository

GitHub

Infores ID

Unknown

FAIRsharing ID

Unknown

Products

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Created: August 12, 2025 | Last modified: October 07, 2025