is a Knowledge Graph.
DrugMechDB is a curated database that captures mechanistic paths from a drug to a disease within a given indication. Expert curators normalize concepts and relationships to standard biomedical identifiers and represent each indication as a directed path through a biological knowledge graph, suitable for computational analysis and benchmarking. Release 2.0.1 contains 4,846 curated paths covering 4,664 drug-disease indications, with 32,641 edges. Indications were sampled from DrugCentral, and paths were derived from descriptions in DrugBank, Wikipedia and the literature.
URL: https://sulab.org/
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| drugmechdb.graph | DrugMechDB Graph Dataset | zenodo.8139357 | Graph | mixed | Curated mechanistic drug–disease path... |
| drugmechdb.web | DrugMechDB Website | DrugMechDB | Graphical Interface | http | Web interface for exploring curated D... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| automat.robokopkg | robokopkg | 4901b2bc764444ea | Graph | kgx-jsonl | had primary source | Robokop KG (Automat) |
Created: August 12, 2025 | Last modified: October 04, 2026