is a Data Source.
The Genotype-Tissue Expression (GTEx) project provides a comprehensive resource to study tissue-specific gene expression and regulation. Samples were collected from 54 non-diseased tissue sites across nearly 1000 individuals, primarily for molecular assays including WGS, WES, and RNA-Seq.
genomics, biomedical, anatomy and development
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| gtex.portal | GTEx Portal | home | GraphicalInterface | http | GTEx Portal web interface for explori... |
| gtex.bulk-data | GTEx Bulk Data Downloads | adult-gtex | Product | tsv | Complete GTEx v8 data including gene ... |
| gtex.eqtl-data | GTEx eQTL Data | qtl | Product | tsv | eQTL (expression quantitative trait l... |
| gtex.api | GTEx REST API | rest | ProgrammingInterface | json | GTEx REST API for programmatic access... |
| gtex.dbgap-data | GTEx dbGaP Data | study.cgi?study_id=phs000424 | Product | vcf | Individual-level genotype and phenoty... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| automat.gtex | gtex_automat | a6448b9092bb81a1 | GraphProduct | kgx-jsonl | GTEx Automat |
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | ❔ | Network embeddings of the Bioteque gr... |
| ubkg.neo4j | UBKG Neo4j Docker Distribution | ubkg-downloads.xconsortia.org | GraphProduct | ❔ | Turnkey neo4j distributions that depl... |
| ubkg.csv | UBKG Ontology CSV Files | ubkg-downloads.xconsortia.org | GraphProduct | csv | Ontology CSV files that can be import... |
| epigraphdb.graph | EpiGraphDB Graph Database | graph-database | GraphProduct | neo4j | Integrated graph knowledge base combi... |