is an Aggregator.
The Human Protein Atlas (HPA) is a Swedish-based program aiming to map all human proteins in cells, tissues and organs using an integration of various omics technologies, including antibody-based imaging, mass spectrometry-based proteomics, transcriptomics and systems biology. The HPA aggregates and presents data from eight different resources covering tissue, brain, single cell, subcellular, cancer, blood, cell line, and structure & interaction atlases.
biomedical, proteomics, genomics, anatomy and development, health
infores:hpa
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| hpa.portal | Human Protein Atlas Portal | www.proteinatlas.org | GraphicalInterface | http | Main web portal for exploring protein... |
| hpa.proteinatlas.tsv | HPA Complete Data (TSV) | proteinatlas.tsv.zip (6.0 MB) | Product | tsv | Complete Human Protein Atlas data in ... |
| hpa.proteinatlas.json | HPA Complete Data (JSON) | proteinatlas.json.gz (10.3 MB) | Product | json | Complete Human Protein Atlas data in ... |
| hpa.proteinatlas.xml | HPA Complete Data (XML) | proteinatlas.xml.gz (679.1 MB) | Product | xml | Complete Human Protein Atlas data in ... |
| hpa.normal_tissue ⚠ | HPA Normal Tissue Data | normal_tissue.tsv.zip | Product | tsv | Normal tissue expression data based o... |
| hpa.pathology ⚠ | HPA Pathology Data | pathology.tsv.zip | Product | tsv | Pathology data including cancer tissu... |
| hpa.subcellular_location ⚠ | HPA Subcellular Location Data | subcellular_location.tsv.zip | Product | tsv | Subcellular localization data based o... |
| hpa.rna_tissue ⚠ | HPA RNA Tissue Expression Data | rna_tissue.tsv.zip | Product | tsv | RNA expression data in human tissues ... |
| hpa.rna_celline ⚠ | HPA RNA Cell Line Expression Data | rna_celline.tsv.zip | Product | tsv | RNA expression data in human cell lin... |
| hpa.rna_single_cell ⚠ | HPA Single Cell RNA Expression Data | rna_single_cell.tsv.zip | Product | tsv | Single cell expression data from huma... |
| hpa.brain_rna ⚠ | HPA Brain RNA Expression Data | brain_rna.tsv.zip | Product | tsv | Brain-specific expression data includ... |
| hpa.blood_protein ⚠ | HPA Blood Protein Data | blood_protein.tsv.zip | Product | tsv | Blood protein expression data from he... |
| hpa.rna_immune_cell ⚠ | HPA Immune Cell RNA Data | rna_immune_cell.tsv.zip | Product | tsv | Immune cell expression data from sing... |
| hpa.api.xml | HPA XML API | download | ProgrammingInterface | xml | Programmatic access to individual pro... |
| hpa.api.tsv | HPA TSV API | download | ProgrammingInterface | tsv | Programmatic access to individual pro... |
| hpa.api.json | HPA JSON API | download | ProgrammingInterface | json | Programmatic access to individual pro... |
| hpa.api.rdf | HPA RDF API | download | ProgrammingInterface | rdfxml | Programmatic access to individual pro... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | ❔ | Network embeddings of the Bioteque gr... |
| clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | Neo4j database dump of the Clinical K... |
| cancer-genome-interpreter.clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | Neo4j database dump of the Clinical K... |
| spoke.graph | SPOKE Graph | ❔ | GraphProduct | ❔ | The SPOKE knowledge graph containing ... |
| pheknowlator.graph | PheKnowLator graph | knowledge_graphs?pageState=(%22StorageObjectListTable%22:(%22f%22:%22%255B%255D%22))&inv=1&invt=Ab5_1Q&project=pheknowlator | GraphProduct | owl | PheKnowLator graph files, including s... |
Created: October 09, 2025 | Last modified: October 09, 2025