is an Aggregator.
IntAct is an open, curated molecular interaction database maintained at EMBL‑EBI. It aggregates experimentally-derived interaction evidence from literature curation and direct submissions, and distributes data in PSI‑MI XML and MITAB formats along with curated datasets and documentation.
proteomics, systems biology
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| intact.portal | IntAct Portal | home | GraphicalInterface | http | Web portal for browsing, searching, a... |
| intact.ftp.psi25 | IntAct PSI-MI XML 2.5 | psi25 | Product | psi_mi_xml | IntAct data in PSI-MI XML 2.5 format ... |
| intact.ftp.psi30 | IntAct PSI-MI XML 3.0 | psi30 | Product | psi_mi_xml | IntAct data in PSI-MI XML 3.0 format ... |
| intact.ftp.psimitab | IntAct PSI-MI MITAB 2.7 | psimitab | Product | psi_mi_mitab | IntAct data in PSI-MI MITAB format (d... |
| intact.ftp.psimitab.all | IntAct MITAB Archive | intact.zip (807.1 MB) | Product | psi_mi_mitab | Entire MITAB export of the database a... |
| intact.datasets | IntAct Datasets | datasets | Product | http | Curated and computational datasets (d... |
| intact.docs.user-guide | IntAct User Guide | user-guide | DocumentationProduct | http | User guide and documentation for sear... |
| clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | Neo4j database dump of the Clinical K... |
| rnacentral.portal | RNAcentral Portal | rnacentral.org | GraphicalInterface | http | Web portal for searching and browsing... |
| rnacentral.api | RNAcentral REST API | api | ProgrammingInterface | http | REST API for programmatic access to R... |
| rnacentral.ftp | RNAcentral FTP Archive | RNAcentral | Product | http | FTP archive with current and archived... |
| rnacentral.public-db | RNAcentral Public Postgres Database | public-database | DataModelProduct | postgres | Public PostgreSQL database for direct... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | ❔ | Network embeddings of the Bioteque gr... |
| epigraphdb.graph | EpiGraphDB Graph Database | graph-database | GraphProduct | neo4j | Integrated graph knowledge base combi... |
| automat.intact | intact_automat | e5b936f966a02c2c | GraphProduct | kgx-jsonl | IntAct Automat |
Last modified: September 09, 2025