is an Aggregator.
It is part of the BER collection.
IntAct is an open, curated molecular interaction database maintained at EMBL‑EBI. It aggregates experimentally-derived interaction evidence from literature curation and direct submissions, and distributes data in PSI‑MI XML and MITAB formats along with curated datasets and documentation.
infores:intact
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| intact.portal | IntAct Portal | home | Graphical Interface | http | Web portal for browsing, searching, a... |
| intact.api | IntAct Web Service | ws | Programming Interface | http | IntAct web service and URL-based prog... |
| intact.ftp.psi25 | IntAct PSI-MI XML 2.5 | psi25 | Product | psi_mi_xml | IntAct data in PSI-MI XML 2.5 format ... |
| intact.ftp.psi30 | IntAct PSI-MI XML 3.0 | psi30 | Product | psi_mi_xml | IntAct data in PSI-MI XML 3.0 format ... |
| intact.ftp.psimitab | IntAct PSI-MI MITAB 2.7 | psimitab | Product | psi_mi_mitab | IntAct data in PSI-MI MITAB format (d... |
| intact.ftp.psimitab.all | IntAct MITAB Archive | intact.zip (807.1 MB) | Product | psi_mi_mitab | Entire MITAB export of the database a... |
| intact.datasets | IntAct Datasets | datasets | Product | http | Curated and computational datasets (d... |
| intact.docs.user-guide | IntAct User Guide | user-guide | Documentation | http | User guide and documentation for sear... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | mixed | had primary source | Network embeddings of the Bioteque gr... |
| clinicalkg.graph | CKG Graph Dump | 1 | Graph | mixed | had primary source | Neo4j database dump of the Clinical K... |
| epigraphdb.graph | EpiGraphDB Graph Database | graph-database | Graph | neo4j | had primary source | Integrated graph knowledge base combi... |
| rnacentral.portal | RNAcentral Portal | rnacentral.org | Graphical Interface | http | had primary source | Web portal for searching and browsing... |
| rnacentral.api | RNAcentral REST API | api | Programming Interface | http | had primary source | REST API for programmatic access to R... |
| rnacentral.ftp | RNAcentral FTP Archive | RNAcentral | Product | http | had primary source | FTP archive with current and archived... |
| rnacentral.public-db | RNAcentral Public Postgres Database | public-database | Data Model | postgres | had primary source | Public PostgreSQL database for direct... |
| automat.intact | intact_automat | e5b936f966a02c2c | Graph | kgx-jsonl | had primary source | IntAct Automat |
| cancer-genome-interpreter.clinicalkg.graph | CKG Graph Dump | 1 | Graph | mixed | had primary source | Neo4j database dump of the Clinical K... |
| genecards.protein.interactions ⚠ | GeneCards Protein Interactions | www.genecards.org | Product | http | had primary source | Protein interaction data aggregated f... |
| irefindex.database | iRefIndex Database | ❔ | Product | psi_mi_mitab | had primary source | Historical consolidated protein inter... |
| translator.intact.graph | Translator IntAct KGX Graph | latest | Graph | kgx-jsonl | had primary source | KGX JSONL graph package for IntAct di... |
| unibiomap.links | UniBioMap Graph Links | unibiomap.links.csv (1.3 GB) | Graph | csv | had primary source | Core UniBioMap graph edges file. |
| unibiomap.auxs | UniBioMap Graph Auxiliaries | unibiomap.auxs.tsv (563.9 MB) | Graph | tsv | had primary source | Auxiliary UniBioMap graph annotations... |
| unibiomap.pred | UniBioMap Predicted Graph | unibiomap.pred.csv (2.3 GB) | Graph | csv | had primary source | Predicted UniBioMap graph edges with ... |
| unibiomap.pred.full | UniBioMap Predicted Graph (Full) | unibiomap.pred.full.csv (5.9 GB) | Graph | csv | had primary source | Full unfiltered UniBioMap predicted g... |
| string.protein.links | STRING Protein Links | protein.links.v12.0.txt.gz (128.7 GB) | Graph | txt | had primary source | protein network data (full network, s... |
| string.protein.links.detailed | STRING Protein Links Detailed | protein.links.detailed.v12.0.txt.gz (189.6 GB) | Graph | txt | had primary source | protein network data (full network, i... |
| string.protein.links.full | STRING Protein Links Full | protein.links.full.v12.0.txt.gz (199.6 GB) | Graph | txt | had primary source | protein network data (full network, i... |
| string.protein.physical.links | STRING Protein Physical Links | protein.physical.links.v12.0.txt.gz (11.1 GB) | Graph | txt | had primary source | protein network data (physical subnet... |
| string.protein.physical.links.detailed | STRING Protein Physical Links Detailed | protein.physical.links.detailed.v12.0.txt.gz (13.8 GB) | Graph | txt | had primary source | protein network data (physical subnet... |
| string.protein.physical.links.full | STRING Protein Physical Links Full | protein.physical.links.full.v12.0.txt.gz (14.5 GB) | Graph | txt | had primary source | protein network data (physical subnet... |
| string.cog.links | STRING COG Links | COG.links.v12.0.txt.gz (176.8 MB) | Graph | txt | had primary source | association scores between orthologou... |
| string.cog.links.detailed | STRING COG Links Detailed | COG.links.detailed.v12.0.txt.gz (238.7 MB) | Graph | txt | had primary source | association scores (incl. subscores p... |
| string.database | STRING Database Network Schema | network_schema.v12.0.sql.gz (262.2 GB) | Graph | postgres | had primary source | full database, part II: the networks ... |
| translator.translator_kg.graph | Translator Aggregate KGX Graph | latest | Graph | kgx-jsonl | had primary source | Aggregated KGX JSONL graph package co... |
| ckg.graph | CKG Graph Database Dump | 1 | Graph | neo4j | had primary source | Graph database dump and additional re... |
| afcs.intact.mitab | AFCS IntAct MITAB Dataset | AFCS.zip (704.1 KB) | Product | psi_mi_mitab | was influenced by | IntAct-hosted AFCS protein interactio... |
| imex.portal | IMEx Portal | www.imexconsortium.org | Graphical Interface | http | had primary source | Search interface for the shared IMEx ... |
| imex.downloads | IMEx Downloads | downloads | Product | psi_mi_mitab | had primary source | IMEx interaction downloads distribute... |
| drkg.graph | DRKG graph | drkg.tar.gz (206.6 MB) | Graph | mixed | had primary source | DRKG graph files, including a TSV of ... |
| rtx-kg2.graph.nodes | RTX-KG2.10.1c KGX JSONL Nodes | kg2c-2.10.1-v1.0-nodes.jsonl.gz (359.1 MB) | Graph | kgx-jsonl | had primary source | Nodes for KGX distribution of the RTX... |
| rtx-kg2.graph.edges | RTX-KG2.10.1c KGX JSONL Edges | kg2c-2.10.1-v1.0-edges.jsonl.gz (1.7 GB) | Graph | kgx-jsonl | had primary source | Edges for KGX distribution of the RTX... |
| rtx-kg2.neo4j | RTX-KG2 Neo4j | arax.ncats.io | Programming Interface | http | had primary source | Neo4j distribution of the RTX-KG2 as ... |
| genemania.networks | GeneMANIA Interaction Network Archive | current | Graph | txt | was derived from | Downloadable GeneMANIA interaction ne... |
| hippie.current.tab | HIPPIE Current TAB Dataset | hippie_current.txt (132.3 MB) | Product | tsv | was derived from | Current HIPPIE v2.4 interaction datas... |
| hippie.current.mitab | HIPPIE Current PSI-MI TAB Dataset | HIPPIE-current.mitab.txt (245.1 MB) | Product | psi_mi_mitab | was derived from | Current HIPPIE v2.4 interaction datas... |
| hpidb.mitab ⚠ | HPIDB PSI-MITAB Dataset | hpidb.igbb.msstate.edu | Product | psi_mi_mitab | was derived from | Downloadable HPIDB host-pathogen inte... |
| humannet.network | HumanNet Network File | HumanNet-XC.tsv.gz (11.7 MB) | Graph | tsv | was derived from | HumanNet-XC v3 functional gene networ... |
| humannet.network.symbol | HumanNet Network File (Gene Symbols) | HumanNet-XC.symbol.tsv.gz (13.3 MB) | Graph | tsv | was derived from | HumanNet-XC v3 functional gene networ... |
| iid.human_annotated_ppis | IID Human Annotated PPIs | human_annotated_PPIs.txt.gz (144.0 MB) | Graph | tsv | was derived from | IID annotated human protein-protein i... |
| iid.mouse_annotated_ppis | IID Mouse Annotated PPIs | mouse_annotated_PPIs.txt.gz (38.2 MB) | Graph | tsv | was derived from | IID annotated mouse protein-protein i... |
| mint.mitab.all ⚠ | MINT MITAB Full Dataset | * | Product | psi_mi_mitab | was influenced by | Complete MINT dataset in PSI-MI MITAB... |
| mint.mitab.human ⚠ | MINT Human Interactions | species:human | Product | psi_mi_mitab | was influenced by | Human protein interactions from MINT ... |
| mint.mitab.mouse ⚠ | MINT Mouse Interactions | species:mouse | Product | psi_mi_mitab | was influenced by | Mouse protein interactions from MINT ... |
| mint.mitab.drosophila ⚠ | MINT Drosophila Interactions | species:fruit%20fly | Product | psi_mi_mitab | was influenced by | Drosophila melanogaster protein inter... |
| mint.mitab.yeast ⚠ | MINT Yeast Interactions | species:yeast | Product | psi_mi_mitab | was influenced by | Saccharomyces cerevisiae protein inte... |
| mint.psicquic | MINT PSICQUIC Web Service | webservices | Programming Interface | http | was influenced by | PSICQUIC SOAP and REST web services f... |
| pathwaycommons.biopax | Integrated BioPAX Model | pc-biopax.owl.gz (1.6 GB) | Product | biopax | was derived from | PC v14 integrated BioPAX Level 3 unif... |
| proteomehd.intact_interactions | ProteomeHD IntAct Interactions | IntAct_interactions.7z (1.3 MB) | Product | csv | was derived from | Pre-processed human IntAct interactio... |
| pathwaycommons.downloads | Pathway Commons Data Downloads | v14 | Product | mixed | was derived from | Download directory for Pathway Common... |
| pathwaycommons.sif | SIF Network Format | pc-hgnc.sif.gz (9.4 MB) | Product | sif | was derived from | PC v14 Simple Interaction Format netw... |
| pathwaycommons.gmt | GMT Gene Set Format | pc-hgnc.gmt.gz (256.4 KB) | Product | tsv | was derived from | PC v14 Gene Matrix Transposed gene se... |
| pathwaycommons.txt | Extended SIF TXT Format | pc-hgnc.txt.gz (110.3 MB) | Product | txt | was derived from | PC v14 tab-delimited extended SIF nod... |
| biobtree.api | BioBTree REST API | api | Programming Interface | http | had primary source | REST API for searching identifiers an... |
| genecards.web.interface | GeneCards Web Interface | www.genecards.org | Graphical Interface | http | had primary source | Web-based interface for searching and... |
| biobtree.graph.human-subgraph | BioBTree Knowledge Graph - Human Subgraph (KGX) | 20816742 | Graph | kgx | had primary source | Human-scoped, Neo4j-ready subgraph of... |
| kg-covid-19.graph ⚠ | KG-COVID-19 graph | kg-covid-19 | Graph | kgx | had primary source | KGX nodes and edges for KG-COVID-19 |
IntAct is a curated molecular interaction database, aggregating experimental evidence from the literature and direct submissions and distributing data in PSI‑MI XML and MITAB formats. It is part of the IMEx consortium and a Global Core Biodata Resource.
Please cite IntAct and any specific datasets used, and refer to the CC BY 4.0 license terms for data reuse.
Created: July 08, 2025 | Last modified: September 23, 2026