European Bioinformatics Institute (EMBL-EBI)

is an Organization.

EBI (European Bioinformatics Institute) provides bioinformatics tools and databases. The institute supplies sequence, structure, and expression data for research.

Homepage

Website

GitHub

GitHub

Associated Resources

ID Category Number of Products Description
1000genomes DataSource 10 The International Genome Sample Resource (IGSR) maintains and shares the open...
biomodels DataSource 9 BioModels is EMBL-EBI's repository of mathematical models of biological and b...
chebi Ontology 143 A structured classification of molecular entities of biological interest focu...
chembl DataSource 69 ChEMBL is a manually curated database of bioactive molecules with drug-like p...
complexportal DataSource 55 The Complex Portal is an encyclopaedic resource of macromolecular complexes f...
efo Ontology 22 The Experimental Factor Ontology (EFO) provides a systematic description of m...
ensembl DataSource 72 A genome browser for vertebrate genomes that supports research in comparative...
eva DataSource 10 The European Variation Archive (EVA) is EMBL-EBI's open-access archive for ge...
expressionatlas Aggregator 19 Expression Atlas is EMBL-EBI's open science resource that provides informatio...
goa DataSource 23 The Gene Ontology Annotation (GOA) Database provides high-quality Gene Ontolo...
gwascatalog DataSource 42 The NHGRI-EBI GWAS Catalog is a curated, searchable, and freely available dat...
identifiers-org Aggregator 11 Identifiers.org, run by EMBL-EBI as an ELIXIR Interoperability Platform resou...
intact Aggregator 70 IntAct is an open, curated molecular interaction database maintained at EMBL‑...
interpro DataSource 42 InterPro is a database of protein families, domains and functional sites in w...
metabolights DataSource 11 MetaboLights is EMBL-EBI's open repository for metabolomics experiments and d...
ols Aggregator 10 The Ontology Lookup Service (OLS) is a repository for biomedical ontologies t...
omicsdi Aggregator 3 OmicsDI (Omics Discovery Index) is an EMBL-EBI index of dataset metadata from...
oxo Aggregator 1 OxO (Ontology Xref Service) is a cross-ontology mapping service developed by ...
pcl Ontology 7 Cell types that are provisionally defined by experimental techniques such as ...
pfam DataSource 30 Pfam is a large collection of protein families, each represented by multiple ...
pride DataSource 11 The PRIDE (PRoteomics IDEntifications) Archive is EMBL-EBI's public repositor...
reactome DataSource 135 Reactome is a comprehensive, curated, and peer-reviewed pathway database repr...
rfam DataSource 15 Rfam is a comprehensive database of RNA families, each represented by multipl...
rnacentral Aggregator 16 RNAcentral is the international non-coding RNA (ncRNA) sequence database that...
unichem Aggregator 21 UniChem is a large-scale non-redundant database maintained by EMBL-EBI that p...
uniprot DataSource 146 UniProt Protein Knowledge Base
uniref DataSource 8 UniRef (Universal Protein Resource Reference Clusters) provides clustered set...

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Created: November 19, 2025 | Last modified: December 07, 2025