expressionatlas

is an Aggregator.

Expression Atlas is EMBL-EBI's open science resource that provides information about gene and protein expression across species and biological conditions. It aggregates, processes, and visualizes gene expression data from thousands of manually curated experiments spanning multiple species, tissue types, developmental stages, diseases, and experimental perturbations. Both bulk RNA-sequencing and single-cell RNA-sequencing datasets are supported, offering baseline expression profiles and differential gene expression analysis results through standardized processing pipelines.

Domains

genomics, biological systems, organisms

License

CC-BY-4.0

Homepage

expressionatlas

Repository

GitHub

Infores ID

Unknown

FAIRsharing ID

Unknown

Products

From this Resource
ID Name URL Category Format Description
expressionatlas.portal Expression Atlas Portal home GraphicalInterface http Main web portal for searching and exp...
expressionatlas.single-cell Single Cell Expression Atlas sc GraphicalInterface http Single Cell Expression Atlas portal f...
expressionatlas.api Expression Atlas REST API api.html ProgrammingInterface http REST API for programmatic access to e...
expressionatlas.ftp-bulk Expression Atlas FTP (Bulk Data) experiments Product http FTP archive containing processed expr...
expressionatlas.ftp-single-cell Expression Atlas FTP (Single Cell Data) single-cell Product http FTP archive containing single-cell RN...
expressionatlas.experiment-downloads Expression Atlas Experiment Downloads download Product tsv Individual experiment data downloads ...
expressionatlas.r-objects Expression Atlas R Data Objects r-data-objects.html Product mixed Normalized gene expression data and r...
expressionatlas.baseline-summary Expression Atlas Baseline Summary experiments Product tsv Baseline expression summary data acro...
expressionatlas.differential-results Expression Atlas Differential Results experiments?experimentType=differential Product tsv Differential gene expression results ...
expressionatlas.documentation Expression Atlas Help Documentation index.html DocumentationProduct http Comprehensive help documentation cove...
From other Resources
ID Name URL Category Format Description
rnacentral.portal RNAcentral Portal rnacentral.org GraphicalInterface http Web portal for searching and browsing...
rnacentral.api RNAcentral REST API api ProgrammingInterface http REST API for programmatic access to R...
rnacentral.ftp RNAcentral FTP Archive RNAcentral Product http FTP archive with current and archived...
rnacentral.public-db RNAcentral Public Postgres Database public-database DataModelProduct postgres Public PostgreSQL database for direct...

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Created: September 09, 2025 | Last modified: October 09, 2025