is an Aggregator.
RNAcentral is the international non-coding RNA (ncRNA) sequence database that aggregates and harmonizes ncRNA sequences and annotations from expert databases across all domains of life. It provides comprehensive search, browse, programmatic access, and bulk downloads for sequences, secondary structures, and cross-references.
Unknown
infores:rnacentral
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| rnacentral.portal | RNAcentral Portal | rnacentral.org | Graphical Interface | http | Web portal for searching and browsing... |
| rnacentral.api | RNAcentral REST API | api | Programming Interface | http | REST API for programmatic access to R... |
| rnacentral.ftp | RNAcentral FTP Archive | RNAcentral | Product | http | FTP archive with current and archived... |
| rnacentral.public-db | RNAcentral Public Postgres Database | public-database | Data Model | postgres | Public PostgreSQL database for direct... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| mechreponet.kg | MechRepoNet Knowledge Graph | publication | Product | mixed | had primary source | The MechRepoNet knowledge graph in it... |
| rna-kg.kg.neo4j | RNA-KG Neo4j Dump | rnakgv20.dump (3.7 GB) | Graph | neo4j | had primary source | RNA-KG as a Neo4j Dump |
| rna-kg.kg.nodes | RNA-KG Nodes | nodes.csv (4.1 GB) | Graph | csv | had primary source | RNA-KG Nodes in CSV format |
| rna-kg.kg.edges | RNA-KG Edges | edges.csv (17.1 GB) | Graph | csv | had primary source | RNA-KG Edges in CSV format |
| ribocentre.search | Sequence Search | search.html | Graphical Interface | http | had primary source | Search functionality integrated with ... |
| goa.ftp | GOA FTP Site | goa | Product | http | was informed by | FTP site containing current and archi... |
| biobtree.api | BioBTree REST API | api | Programming Interface | http | had primary source | REST API for searching identifiers an... |
| genecards.web.interface | GeneCards Web Interface | www.genecards.org | Graphical Interface | http | had primary source | Web-based interface for searching and... |
| biobtree.graph.human-subgraph | BioBTree Knowledge Graph - Human Subgraph (KGX) | 20816742 | Graph | kgx | had primary source | Human-scoped, Neo4j-ready subgraph of... |
| genomickb.graph | GenomicKB Graph Dump | genomickb-a-knowledgebase-for-the-human-genome | Graph | http | had primary source | GenomicKB 1.0 Neo4j Database Dump (Re... |
RNAcentral is a comprehensive repository of non-coding RNA sequences and related annotations aggregated from dozens of expert databases. It supports search, sequence similarity, genome browsing, secondary structure visualisation, and programmatic/API access.
Please cite the latest RNAcentral publication and acknowledge specific expert databases where appropriate.
Created: July 17, 2025 | Last modified: September 23, 2026