is a Data Source.
The NHGRI-EBI GWAS Catalog is a curated, searchable, and freely available database of SNP-trait associations from published and submitted genome-wide association studies. Expert curators extract reported traits, significant variant-trait associations, and study metadata, providing an integrated resource updated on a weekly cycle and accessible via web interfaces, bulk downloads, summary statistics, and a REST API.
genomics, health, biomedical, investigations
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| gwascatalog.web | GWAS Catalog Web Portal | gwas | GraphicalInterface | http | Web interface for searching, browsing... |
| gwascatalog.api | GWAS Catalog REST API v2 | api | ProgrammingInterface | ❔ | REST API providing programmatic acces... |
| gwascatalog.associations.tsv | GWAS Catalog Associations TSV | gwas-catalog-associations.tsv (460.0 MB) | Product | tsv | Full data dump of GWAS Catalog associ... |
| gwascatalog.associations.json | GWAS Catalog Associations JSON | gwas-catalog-associations.json | Product | json | Full data dump of GWAS Catalog associ... |
| gwascatalog.studies.tsv | GWAS Catalog Studies TSV | gwas-catalog-studies.tsv (46.4 MB) | Product | tsv | Study metadata file containing per-st... |
| gwascatalog.variants.tsv | GWAS Catalog Variants TSV | gwas-catalog-variants.tsv | Product | tsv | Variant metadata file containing per-... |
| gwascatalog.traits_efo.tsv | GWAS Catalog Trait EFO Mappings TSV | gwas-catalog-traits-efo.tsv | Product | tsv | EFO trait mapping file linking GWAS C... |
| gwascatalog.associations.owl | GWAS Catalog Associations OWL | gwas-catalog-associations.owl.gz | Product | owl | RDF/OWL representation of GWAS Catalo... |
| gwascatalog.diagram.current | GWAS Catalog Diagram (Current SVG) | gwas-catalog-diagram.svg | DocumentationProduct | svg | Compressed GWAS Catalog diagram (kary... |
| gwascatalog.diagram.archive | GWAS Catalog Diagram Archive | gwas-catalog-diagram-archive.zip | DocumentationProduct | svg | Archive of previous GWAS Catalog diag... |
| gwascatalog.summary_statistics.ftp | GWAS Catalog Summary Statistics FTP | summary_statistics | DocumentationProduct | ❔ | Harmonised summary statistics landing... |
| clinicalkg.graph | CKG Graph Dump | 1 | GraphProduct | mixed | Neo4j database dump of the Clinical K... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| automat.gwascatalog | gwascatalog_automat | e30aceb322a33462 | GraphProduct | kgx-jsonl | GWASCatalog Automat |
| indra.cogex.code | INDRA CoGEx Build Code | indra_cogex | ProcessProduct | ❔ | INDRA CoGEx is a graph database integ... |
| spoke.graph | SPOKE Graph | ❔ | GraphProduct | ❔ | The SPOKE knowledge graph containing ... |
| disgenet.data | DisGeNET Data | www.disgenet.com | GraphProduct | ❔ | DisGeNET data, including gene to dise... |
| alzkb.browser | AlzKB Graph Database Browser | login | GraphicalInterface | http | A browser interface for a knowledge g... |
| alzkb.data | AlzKB Data Release (Version 2.0.0) | v2.0.0 | GraphProduct | ❔ | Memgraph data release for AlzKB. |
| aop-db.data | AOP-DB Data | adverse-outcome-pathway-database-aop-db-version-2 | Product | ❔ | The EPA has developed the Adverse Out... |
Created: July 20, 2025 | Last modified: September 02, 2025
