is a Data Source.
Pfam is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs), providing annotations of protein domains and functional sites.
proteomics
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| pfam.site | Interface for the Pfam Database | #table | GraphicalInterface | ❔ | The core Pfam database containing pro... |
| pfam.a.models | Pfam-A HMM Library | Pfam-A.hmm.gz | Product | ❔ | The Pfam HMM library for Pfam-A famil... |
| pfam.a.data | Pfam-A HMM data | Pfam-A.hmm.dat.gz | Product | ❔ | The Pfam HMM data for Pfam-A families... |
| pfam.a.seedalignment | Pfam-A Seed alignment | Pfam-A.seed.gz | Product | ❔ | Pfam-A Seed alignment. |
| pfam.a.fullalignment | Pfam-A Full alignment | Pfam-A.full.gz | Product | ❔ | Pfam-A Full alignment. |
| pfam.api | InterPro API | api | ProgrammingInterface | json | REST API for programmatic access to P... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| spoke.graph | SPOKE Graph | ❔ | GraphProduct | ❔ | The SPOKE knowledge graph containing ... |