is a Data Source.
InterPro is a database of protein families, domains and functional sites in which identifiable features found in known proteins can be applied to unknown protein sequences.
biological systems, proteomics, genomics, drug discovery
infores:interpro
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| interpro.web | InterPro Web Interface | interpro | GraphicalInterface | http | Web interface for browsing and search... |
| interpro.api | InterPro API | api | ProgrammingInterface | ❔ | RESTful API for programmatic access t... |
| interpro.interproscan | InterProScan | interproscan-5.74-105.0-64-bit.tar.gz (6.7 GB) | ProcessProduct | java | Software package for scanning protein... |
| interpro.entry_list | InterPro Entry List | entry.list (2.5 MB) | DataModelProduct | tsv | Complete list of InterPro entries wit... |
| interpro.xml | InterPro XML | interpro.xml.gz (38.6 MB) | DataModelProduct | xml | Complete InterPro database in XML for... |
| interpro.match_complete | InterPro Match Complete | match_complete.xml.gz (83.1 GB) | MappingProduct | xml | Complete set of matches between prote... |
| interpro.uniparc_match | UniParc Match | uniparc_match.tar.gz (308.5 GB) | MappingProduct | xml | InterPro matches for UniParc protein ... |
| interpro.protein2ipr | Protein to InterPro Mappings | protein2ipr.dat.gz (19.5 GB) | MappingProduct | tsv | Mappings of protein sequences to Inte... |
| interpro.parent_child_tree | Parent-Child Tree | ParentChildTreeFile.txt (612.9 KB) | DataModelProduct | tsv | Hierarchical relationships between In... |
| interpro.interpro2go | InterPro to GO Mappings | interpro2go (2.9 MB) | MappingProduct | tsv | Mappings between InterPro entries and... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| spoke.graph | SPOKE Graph | ❔ | GraphProduct | ❔ | The SPOKE knowledge graph containing ... |
| bioteque.embeddings | Bioteque Embeddings | embeddings | Product | ❔ | Network embeddings of the Bioteque gr... |
| mechreponet.kg | MechRepoNet Knowledge Graph | publication | ❔ | The MechRepoNet knowledge graph in it... | |
| drugmechdb.graph | DrugMechDB Graph Dataset | zenodo.8139357 | GraphProduct | mixed | Curated mechanistic drug–disease path... |
| obo-db-ingest.interpro.obo | interpro OBO | interpro.obo (1.1 MB) | Product | obo | interpro OBO |
| obo-db-ingest.interpro.owl | interpro OWL | interpro.owl (1.3 MB) | Product | owl | interpro OWL |
| obo-db-ingest.interpro.json | interpro OBO Graph JSON | interpro.json (1.1 MB) | Product | json | interpro OBO Graph JSON |
| goa.mapping-files ⚠ | GO Mapping Files | external2go | MappingProduct | txt | Files containing transitive assignmen... |