is a Data Source.
The Kyoto Encyclopedia of Genes and Genomes (KEGG) is a database resource for understanding high-level functions and utilities of the biological system, such as the cell, the organism and the ecosystem, from molecular-level information, especially large-scale molecular datasets generated by genome sequencing and other high-throughput experimental technologies.
biological systems, pathways, pharmacology, drug discovery, genomics, proteomics, chemistry and biochemistry, health
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| kegg.web | KEGG Web Interface | kegg | GraphicalInterface | http | Web interface for browsing and search... |
| kegg.medicus | KEGG MEDICUS | medicus.html | GraphicalInterface | http | Web interface for integrated drug and... |
| kegg.webapps | KEGG Web Apps | webapp | GraphicalInterface | http | Interactive web applications for KEGG... |
| kegg.api | KEGG REST API | rest | ProgrammingInterface | ❔ | REST-style Application Programming In... |
| kegg.pathway | KEGG PATHWAY | pathway.html | Product | ❔ | KEGG pathway maps representing molecu... |
| kegg.brite | KEGG BRITE | brite.html | DataModelProduct | ❔ | BRITE hierarchies and tables for func... |
| kegg.module | KEGG MODULE | module.html | Product | ❔ | KEGG modules representing tighter fun... |
| kegg.orthology | KEGG ORTHOLOGY | ko.html | Product | ❔ | KO (KEGG Orthology) groups representi... |
| kegg.genes | KEGG GENES | genes.html | Product | ❔ | Gene catalogs of completely sequenced... |
| kegg.genome | KEGG GENOME | genome | Product | ❔ | Collection of organisms with complete... |
| kegg.compound | KEGG COMPOUND | compound | Product | ❔ | Collection of small molecules and bio... |
| kegg.glycan | KEGG GLYCAN | glycan | Product | ❔ | Collection of glycans |
| kegg.reaction | KEGG REACTION | reaction | Product | ❔ | Collection of biochemical reactions |
| kegg.disease | KEGG DISEASE | disease | Product | ❔ | Collection of human diseases |
| kegg.drug | KEGG DRUG | drug | Product | ❔ | Collection of drugs |
| kegg.pathway.kgml | KEGG Pathway KGML | xml | DataModelProduct | xml | KEGG pathway maps in KGML (KEGG Marku... |
| kegg.mapper | KEGG Mapper | mapper | ProcessProduct | ❔ | Collection of tools for mapping molec... |
| kegg.syntax | KEGG Syntax | syntax | ProcessProduct | ❔ | Tools for analyzing conserved genes, ... |
| kegg.annotation | KEGG Annotation | annotation | ProcessProduct | ❔ | Tools for KO (KEGG Orthology) assignm... |
| kegg.blastkoala | BlastKOALA | blastkoala | ProcessProduct | ❔ | BLAST-based KO annotation and KEGG ma... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| obo-db-ingest.rhea.sssom.tsv | Rhea SSSOM | rhea.sssom.tsv | MappingProduct | sssom | Rhea SSSOM |
| obo-db-ingest.bigg.metabolite.sssom.tsv | bigg.metabolite SSSOM | bigg.metabolite.sssom.tsv | MappingProduct | sssom | bigg.metabolite SSSOM |
| obo-db-ingest.kegg.genome.obo | kegg.genome OBO | kegg.genome.obo | DataModelProduct | obo | kegg.genome OBO |
| obo-db-ingest.kegg.genome.owl | kegg.genome OWL | kegg.genome.owl | DataModelProduct | owl | kegg.genome OWL |
| obo-db-ingest.kegg.genome.json | kegg.genome OBO Graph JSON | kegg.genome.json | DataModelProduct | json | kegg.genome OBO Graph JSON |
| spoke.graph | SPOKE Graph | ❔ | GraphProduct | ❔ | The SPOKE knowledge graph containing ... |
| rtx-kg2.graph.nodes | RTX-KG2.10.1c KGX JSONL Nodes | kg2c-2.10.1-v1.0-nodes.jsonl.gz | GraphProduct | kgx-jsonl | Nodes for KGX distribution of the RTX... |
| rtx-kg2.graph.edges | RTX-KG2.10.1c KGX JSONL Edges | kg2c-2.10.1-v1.0-edges.jsonl.gz | GraphProduct | kgx-jsonl | Edges for KGX distribution of the RTX... |
| rtx-kg2.neo4j | RTX-KG2 Neo4j | arax.ncats.io | ProgrammingInterface | ❔ | Neo4j distribution of the RTX-KG2 as ... |