is a Data Source.
DIANA-LncBase is a comprehensive repository of experimentally supported miRNA-lncRNA interactions. Version 3.0 contains ~500,000 entries corresponding to ~240,000 unique tissue and cell type specific miRNA-lncRNA pairs in human and mouse. Data derived from manual curation and analysis of >300 high-throughput datasets including AGO-CLIP-Seq, microarrays, and low-yield experiments across 192 cell types and 51 tissues. Includes lncRNA expression profiles and subcellular localization data.
genomics, biological systems
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| lncbase.portal | DIANA-LncBase Portal | LncBase | GraphicalInterface | http | Main web portal for searching experim... |
| lncbase.correlation-viz | LncBase Correlation Visualizations | LncBase | Product | http | Interactive correlation plots showing... |
| lncbase.expression-viz | LncBase Expression Visualizations | LncBase | Product | http | Interactive bar plots showing lncRNA ... |
| lncbase.ucsc-browser | LncBase UCSC Browser Integration | LncBase | Product | http | UCSC Genome Browser integration for v... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| rnacentral.portal | RNAcentral Portal | rnacentral.org | GraphicalInterface | http | Web portal for searching and browsing... |
| rnacentral.api | RNAcentral REST API | api | ProgrammingInterface | http | REST API for programmatic access to R... |
| rnacentral.ftp | RNAcentral FTP Archive | RNAcentral | Product | http | FTP archive with current and archived... |
| rnacentral.public-db | RNAcentral Public Postgres Database | public-database | DataModelProduct | postgres | Public PostgreSQL database for direct... |
Created: September 09, 2025 | Last modified: November 13, 2025