maizegdb

is a Data Source.

It is part of the BER collection.

MaizeGDB is the community database for maize (Zea mays) genetics and genomics, maintained by the USDA-ARS. It integrates genome assemblies and gene models for B73 and an expanding set of maize and related Andropogoneae lines, along with gene function and expression data, genetic and physical maps, phenotypes, stocks, metabolic pathways, and curated literature. The resource provides genome browsers, a MaizeMine data-mining interface, and bulk downloads of sequence and annotation files, and serves as the upstream data source for eco-KG.

License

Not specified

Homepage

maizegdb

Repository

Unknown

Infores ID

Unknown

FAIRsharing ID

Unknown

Product Summary

Products

From this Resource
ID Name URL Category Format Description
maizegdb.downloads MaizeGDB Download Server download.maizegdb.org DataProduct Bulk download server hosting maize an...
maizegdb.gene_model_gff MaizeGDB Gene Model GFF Files All_gene_model_GFF DataProduct Gene model annotation files in GFF fo...
maizegdb.maizemine MaizeMine Downloads MaizeMine DataProduct MaizeMine data warehouse downloads pr...
From other Resources
ID Name URL Category Format Relation Description
eco-kg.graph eco-KG Graph eco-kg GraphProduct kgx had primary source Knowledge graph containing plant trai...

Details

Description

MaizeGDB is the community database for maize (Zea mays) genetics and genomics, maintained by the USDA-ARS. It integrates genome assemblies and gene models for B73 and an expanding set of maize and related Andropogoneae lines, along with gene function and expression data, genetic and physical maps, phenotypes, stocks, metabolic pathways, and curated literature. The resource provides genome browsers, a MaizeMine data-mining interface, and bulk downloads of sequence and annotation files, and serves as the upstream data source for eco-KG.

Contacts

  • USDA-ARS MaizeGDB (https://www.maizegdb.org)

Products

MaizeGDB Download Server

Bulk download server hosting maize and Andropogoneae genome assemblies, gene models (GFF, CDS, protein, genomic sequence), transposable element annotations, and other genomics datasets.

URL: https://download.maizegdb.org/

MaizeGDB Gene Model GFF Files

Gene model annotation files in GFF format for maize genome assemblies hosted on the MaizeGDB download server.

URL: https://download.maizegdb.org/All_gene_model_GFF/

MaizeMine Downloads

MaizeMine data warehouse downloads providing integrated and queryable maize genomics datasets.

URL: https://download.maizegdb.org/MaizeMine/

Publications

Domains: genomics, organisms, agriculture


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Created: June 18, 2026 | Last modified: June 18, 2026