is an Aggregator.
miRBase is the primary online repository for microRNA sequences and annotations, serving as the central registry for microRNA nomenclature and providing a comprehensive archive of published microRNA data including sequences, annotations, predicted targets, and deep sequencing evidence.
genomics, biological systems
Warning: No license entered
Unknown
infores:mirbase
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| mirbase.portal | miRBase Portal | www.mirbase.org | GraphicalInterface | http | Web portal for searching and browsing... |
| mirbase.browse | miRBase Browse Interface | www.mirbase.org | GraphicalInterface | http | Browse interface for exploring microR... |
| mirbase.genomic-search | Genomic Location Search | www.mirbase.org | GraphicalInterface | http | Search interface for finding microRNA... |
| mirbase.tissue-search | Tissue Expression Search | www.mirbase.org | GraphicalInterface | http | Search interface for finding microRNA... |
| mirbase.mirna-dat | miRNA.dat | CURRENT | Product | txt | All published microRNA data in EMBL f... |
| mirbase.hairpin-fa | hairpin.fa | CURRENT | Product | fasta | FASTA format sequences of all microRN... |
| mirbase.mature-fa | mature.fa | CURRENT | Product | fasta | FASTA format sequences of all mature ... |
| mirbase.diff | miRNA.diff | CURRENT | Product | txt | List of changes between the last rele... |
| mirbase.dead | miRNA.dead | CURRENT | Product | txt | List of entries that have been remove... |
| mirbase.hsa-gff3 | Human (hsa) Genome Coordinates | CURRENT | Product | gff | Genome coordinates for human microRNA... |
| mirbase.mmu-gff3 | Mouse (mmu) Genome Coordinates | CURRENT | Product | gff | Genome coordinates for mouse microRNA... |
| mirbase.rno-gff3 | Rat (rno) Genome Coordinates | CURRENT | Product | gff | Genome coordinates for rat microRNAs ... |
| mirbase.dme-gff3 | Drosophila (dme) Genome Coordinates | CURRENT | Product | gff | Genome coordinates for Drosophila mic... |
| mirbase.cel-gff3 | C. elegans (cel) Genome Coordinates | CURRENT | Product | gff | Genome coordinates for C. elegans mic... |
| mirbase.dre-gff3 | Zebrafish (dre) Genome Coordinates | CURRENT | Product | gff | Genome coordinates for zebrafish micr... |
| mirbase.ath-gff3 | Arabidopsis (ath) Genome Coordinates | CURRENT | Product | gff | Genome coordinates for Arabidopsis mi... |
| mirbase.ftp | miRBase FTP Archive | CURRENT | Product | http | FTP archive with current release data... |
| mirbase.readme | README | CURRENT | DocumentationProduct | txt | Release notes and documentation for d... |
| mirbase.help | miRBase Help Documentation | help | DocumentationProduct | http | Comprehensive help documentation incl... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| rnacentral.portal | RNAcentral Portal | rnacentral.org | GraphicalInterface | http | Web portal for searching and browsing... |
| rnacentral.api | RNAcentral REST API | api | ProgrammingInterface | http | REST API for programmatic access to R... |
| rnacentral.ftp | RNAcentral FTP Archive | RNAcentral | Product | http | FTP archive with current and archived... |
| rnacentral.public-db | RNAcentral Public Postgres Database | public-database | DataModelProduct | postgres | Public PostgreSQL database for direct... |
Created: January 01, 2004 | Last modified: October 21, 2025