ncipidkg

is a Knowledge Graph.

It is part of the OKN collection.

The NCI-PID 2.0 Knowledge Graph converts NCI Pathway Interaction Database version 2.0 networks into RDF, capturing protein interactions, signaling pathways, and post-translational modifications enriched with INDRA evidence metadata.

Domains

biomedical, pathways

License

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Homepage

ncipidkg

Repository

Unknown

Infores ID

Unknown

FAIRsharing ID

Unknown

Product Summary

Products

From this Resource
ID Name URL Category Format Description
ncipidkg.graph.ttl NCI-PID 2.0 KG RDF graph 7bc65b82-2a2f-11ed-ac45-0ac135e8bacf GraphProduct ttl RDF graph converting NCI Pathway Inte...
ncipidkg.sparql NCI-PID 2.0 KG SPARQL sparql ProgrammingInterface http SPARQL endpoint for NCI-PID 2.0 KG
ncipidkg.tpf NCI-PID 2.0 KG TPF ncipidkg ProgrammingInterface http Triple Pattern Fragments endpoint for...

Details

NCI-PID 2.0 KG

Description

The NCI-PID 2.0 Knowledge Graph converts NCI Pathway Interaction Database version 2.0 networks into RDF, capturing protein interactions, signaling pathways, and post-translational modifications enriched with INDRA evidence metadata.

The OKN registry entry notes that the graph is built by converting 196 NCI-PID 2.0 pathway networks from Cytoscape CX2 into RDF using standard biological ontologies including RO, GO, SIO, and UniProt identifiers.

Relationship assertions are reified so that evidence counts and source attribution can be attached directly to individual pathway statements, making the graph useful for provenance-aware pathway querying and downstream analysis.

This resource was automatically synchronized from the FRINK OKN registry.

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Created: March 30, 2026 | Last modified: July 01, 2026