is a Data Source.
NODE (National Omics Data Encyclopedia) is a Chinese repository for submitting, archiving and sharing multi-omics data, including sequencing, proteomics, metabolomics and associated metadata, run by the Bio-Med Big Data Center (BIOSINO) of the Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences. Data are organized as projects (OEP accessions), experiments, samples, runs and analyses, and each item is public, restricted (searchable, with download on request to the owner) or private. NODE is indexed by OmicsDI.
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| node-omics.portal | NODE Web Portal | node | Graphical Interface | http | NODE web portal for submitting, searc... |
| node-omics.browse | NODE Browse | browse | Graphical Interface | http | NODE browse and search interface over... |
| node-omics.sftp ⚠ | NODE SFTP Download | fms.biosino.org | Product | mixed | SFTP service for bulk download of NOD... |
| node-omics.statistics | NODE Statistics | statistic | Graphical Interface | http | NODE statistics pages summarizing dat... |
| node-omics.help | NODE Help Documentation | help | Documentation | http | NODE help documentation covering regi... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| omicsdi.portal | OmicsDI Portal | www.omicsdi.org | Graphical Interface | http | had primary source | Web portal for searching and browsing... |
| omicsdi.api | OmicsDI API | index.html | Programming Interface | http | had primary source | Swagger-documented web service for pr... |
NODE is a multi-omics data repository run by the Bio-Med Big Data Center (BIOSINO) at the Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences. It accepts sequencing, proteomics, metabolomics and other omics data with structured metadata.
Submissions are organized as projects (accessions such as OEP00000073), experiments, samples, runs and analyses. Each item carries one of three security levels:
Data can only move toward lower security (private to restricted or public, restricted to public).
The portal is a JavaScript single-page application, so every path under /node/ returns HTTP 200 even when no such page exists. Public files download over HTTP from the detail pages. Bulk download uses SFTP at fms.biosino.org (port 44398) with NODE account credentials. The web application calls an internal JSON API under https://www.biosino.org/node/api/, but no public API documentation was found.
NODE states no data license. Access is governed by each dataset’s security level.
NODE asks users to cite data as “All data are accessible in NODE (https://www.biosino.org/node) with the accession number XXX”. Its site cites the article “Advances in multi-omics big data sharing platform research”, Chinese Bulletin of Life Sciences 2023, 35(12): 1553-1560, DOI 10.13376/j.cbls/2023169. That DOI is not registered with Crossref, so it is not listed as a publication here.
NODE is indexed by OmicsDI.
Created: October 04, 2026 | Last modified: October 04, 2026