is a Knowledge Graph.
NP-KG is a graph framework that creates a biomedical knowledge graph to identify and generate mechanistic hypotheses for pharmacokinetic natural product-drug interactions (NPDIs).
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Sanya Bathla Taneja
Github: sanyabt
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| np-kg.graph.tsv | NP-KG TSV | NP-KG_v3.0.0.tsv?download=1 (1.0 GB) | GraphProduct | tsv | Merged KG with ontology-grounded KG a... |
| np-kg.graph.networkx | NP-KG gpickle | NP-KG_v3.0.0.gpickle?download=1 (892.7 MB) | GraphProduct | mixed | Merged KG with ontology-grounded KG a... |
NP-KG is a graph framework that creates a biomedical knowledge graph (KG) to identify and generate mechanistic hypotheses for pharmacokinetic natural product-drug interactions (NPDIs). NP-KG uses the PheKnowLator ecosystem to create an ontology-grounded KG. It then uses two relation extraction systems to extract triples from full texts of natural product-related scientific literature to create a literature-based graph, and integrates the nodes and edges in the ontology-grounded KG.
Created: March 09, 2025 | Last modified: June 27, 2026