patric

is a Data Source.

The Pathosystems Resource Integration Center (PATRIC) was a bacterial bioinformatics resource center providing integrated data and analysis tools for bacterial infectious disease research. PATRIC has been succeeded by the Bacterial and Viral Bioinformatics Resource Center (BV-BRC), which continues to provide comprehensive bacterial genomics data, comparative analysis tools, and molecular characterization resources. The legacy PATRIC data and functionality have been integrated into BV-BRC.

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Homepage

patric

Repository

Unknown

Infores ID

infores:patric

FAIRsharing ID

Unknown

Product Summary

Products

From this Resource
ID Name URL Category Format Description
patric.web PATRIC/BV-BRC Web Portal www.bv-brc.org GraphicalInterface http BV-BRC web portal that hosts legacy P...
patric.genomes PATRIC Genome Data data_functionality_overview.html Product mixed Legacy PATRIC bacterial genome data a...
patric.api BV-BRC API system_architecture.html#data-api ProgrammingInterface http BV-BRC REST Data API for querying and...
patric.bv_brc_overview BV-BRC Overview for PATRIC Users data_functionality_overview.html DocumentationProduct http BV-BRC quick-start overview for PATRI...

Details

Pathosystems Resource Integration Center

Overview

The Pathosystems Resource Integration Center (PATRIC) was a bacterial bioinformatics resource center providing integrated data and analysis tools for bacterial infectious disease research.

Important: PATRIC has been succeeded by the Bacterial and Viral Bioinformatics Resource Center (BV-BRC), which continues and expands upon PATRIC’s mission. All PATRIC data and functionality have been integrated into BV-BRC at https://www.bv-brc.org/

Historical Context

PATRIC provided:

  • Comprehensive bacterial genome databases
  • Comparative genomics tools
  • Protein family analyses
  • Metabolic pathway reconstructions
  • Gene expression data
  • Antimicrobial resistance information
  • Virulence factor databases

These capabilities are now available through BV-BRC, which has expanded to include viral pathogens as well.

BV-BRC Successor

The Bacterial and Viral Bioinformatics Resource Center (BV-BRC) provides:

  • All PATRIC bacterial data and tools
  • Expanded viral pathogen resources
  • Enhanced comparative analysis capabilities
  • Modern web interface and APIs
  • Integration with other NIAID resources

Products

BV-BRC Web Portal

Comprehensive web interface for accessing bacterial and viral genomics data, analysis tools, and resources (formerly PATRIC portal).

Genome Data

Extensive collection of bacterial genome sequences, annotations, and functional characterizations.

BV-BRC API

RESTful API providing programmatic access to public BV-BRC data, including legacy PATRIC bacterial data.

Information Resource ID

This resource has the Information Resource identifier: infores:patric

Publications

Domains

  • Genomics
  • Microbiology
  • Biomedical
  • Health

Taxon Coverage

Bacteria (NCBITaxon:2)

Migration Notice

PATRIC has been succeeded by BV-BRC. Users should transition to BV-BRC for continued access to bacterial bioinformatics resources.

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Created: November 05, 2025 | Last modified: June 02, 2026