phenio

is a General purpose Resource.

An ontology for accessing and comparing knowledge concerning phenotypes across species and genetic backgrounds.

Domains

phenotype

License

BSD3

Homepage

phenio

Repository

GitHub

Infores ID

Unknown

FAIRsharing ID

Unknown

Contacts

Products

From this Resource
ID Name URL Category Format Description
phenio.model phenio phenio.owl Product owl OWL version of phenio
phenio.graph KG-Phenio kg-phenio.tar.gz (44.9 MB) GraphProduct kgx PHENIO as a KGX graph
From other Resources
ID Name URL Category Format Description
kg-monarch.graph KGX Distribution of KG-Monarch monarch-kg.tar.gz (220.2 MB) GraphProduct kgx KGX Distribution of KG-Monarch
kg-monarch.graph.jsonl KGX JSON-L Distribution of KG-Monarch monarch-kg.jsonl.tar.gz GraphProduct kgx-jsonl KGX JSON-Lines Distribution of KG-Mon...
kg-monarch.graph.rdf RDF Distribution of KG-Monarch monarch-kg.nt.gz (838.5 MB) GraphProduct rdfxml RDF Distribution of KG-Monarch
kg-monarch.graph.neo4j Neo4j Dump of KG-Monarch monarch-kg.neo4j.dump GraphProduct Neo4j Dump of KG-Monarch
kg-monarch.graph.duckdb DuckDB database of KG-Monarch monarch-kg.duckdb.gz GraphProduct DuckDB database of KG-Monarch

Usages

PHENIO is used by the Monarch Initiative for cross-species inference
PHENIO is used by the Monarch Initiative for cross-species inference. As an example, the disease of Parkinsonism may compared on the basis of its phenotype in humans vs. mouse genes and genotypes known to impact these phenotypes.
Type
actual
Link
https://monarchinitiative.org/HP:0001300#disease
Publications
Users
  • The Monarch Initiative

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