is a Data Source.
ReMap is a curated regulatory genomics resource that integrates public DNA-binding sequencing experiments to produce high-quality catalogs of transcriptional regulator binding regions across human, mouse, Drosophila, and Arabidopsis.
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No external IDs available
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| remap.portal | ReMap Portal | remap.univ-amu.fr | Graphical Interface | http | Main ReMap portal for searching trans... |
| remap.api | ReMap REST API | rest_page | Programming Interface | http | ReMap REST interface for programmatic... |
| remap.downloads | ReMap Downloads | download_page | Product | http | ReMap download page for binding regio... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| chea-kg.graph | ChEA-KG Database | ❔ | Graph | neo4j | had primary source | Neo4j knowledge graph integrating tra... |
| chea-kg.libraries | ChEA-KG Library Downloads | index.html#content4-13 | Product | http | had primary source | Download catalog for ChEA3 transcript... |
| chea.libraries | ChEA Library Downloads | index.html#content4-13 | Product | http | had primary source | Download catalog for ChEA3 transcript... |
| dorothea.graph | DoRothEA Regulon Graph | v1.0.0 | Graph | r | had primary source | Core TF–target regulon knowledge grap... |
| tflink.downloads | TFLink Downloads | download | Product | http | had primary source | Download page listing interaction tab... |
| tflink.interactions.human | TFLink Human Interactions | TFLink_Homo_sapiens_interactions_All_simpleFormat_v1.0.tsv.gz (295.1 MB) | Graph | tsv | had primary source | All TF-target gene interactions for H... |
| tflink.interactions.mouse | TFLink Mouse Interactions | TFLink_Mus_musculus_interactions_All_simpleFormat_v1.0.tsv.gz (166.9 MB) | Graph | tsv | had primary source | All TF-target gene interactions for M... |
| tflink.interactions.rat | TFLink Rat Interactions | TFLink_Rattus_norvegicus_interactions_All_simpleFormat_v1.0.tsv (12.4 MB) | Graph | tsv | had primary source | All TF-target gene interactions for R... |
| tflink.interactions.zebrafish | TFLink Zebrafish Interactions | TFLink_Danio_rerio_interactions_All_simpleFormat_v1.0.tsv (3.3 MB) | Graph | tsv | had primary source | All TF-target gene interactions for D... |
| tflink.interactions.fly | TFLink Fruit Fly Interactions | TFLink_Drosophila_melanogaster_interactions_All_simpleFormat_v1.0.tsv (53.9 MB) | Graph | tsv | had primary source | All TF-target gene interactions for D... |
| tflink.interactions.worm | TFLink Nematode Interactions | TFLink_Caenorhabditis_elegans_interactions_All_simpleFormat_v1.0.tsv (46.2 MB) | Graph | tsv | had primary source | All TF-target gene interactions for C... |
| tflink.interactions.yeast | TFLink Yeast Interactions | TFLink_Saccharomyces_cerevisiae_interactions_All_simpleFormat_v1.0.tsv (42.1 MB) | Graph | tsv | had primary source | All TF-target gene interactions for S... |
| tflink.interactions.human.mitab | TFLink Human Interactions (MITAB) | TFLink_Homo_sapiens_interactions_All_mitab_v1.0.tsv.gz (218.9 MB) | Graph | psi_mi_mitab | had primary source | All human TF-target gene interactions... |
| tflink.gmt.human | TFLink Human TF Target Gene Sets | TFLink_Homo_sapiens_interactions_All_GMT_ncbiGeneID_v1.0.gmt (36.1 MB) | Product | tsv | had primary source | Human gene sets, one per transcriptio... |
| tflink.binding-sites.human | TFLink Human Binding Sites | TFLink_Homo_sapiens_bindingSites_All_annotation_v1.0.tsv.gz (153.1 MB) | Product | tsv | had primary source | Genomic locations of human TF binding... |
| tflink.binding-sites.human.gff3 | TFLink Human Binding Sites (GFF3) | TFLink_Homo_sapiens_bindingSites_All_annotation_v1.0.gff3 (913.7 MB) | Product | gff | had primary source | Human TF binding site locations as a ... |
| tflink.binding-sites.human.fasta | TFLink Human Binding Site Sequences | TFLink_Homo_sapiens_bindingSites_All_v1.0.fasta (1.1 GB) | Product | fasta | had primary source | Nucleotide sequences of human TF bind... |
ReMap curates and reprocesses public ChIP-seq, ChIP-exo, and DAP-seq experiments to produce species-specific catalogs of transcriptional regulator binding regions. The current public site supports search, download, track hubs, and API-style access for human, mouse, Drosophila, and Arabidopsis regulatory atlases.
This resource is also an upstream source for ChEA-family transcription factor target libraries in KG-Registry, so those downstream products remain attached here with explicit provenance back to ReMap and the derivative resources that consume it.
Created: May 21, 2026 | Last modified: September 23, 2026