is a Data Source.
The Rat Genome Database (RGD) curates and integrates rat genomic and phenotype data, and provides tools for genomics, physiology and functional genomics in rats. RGD contains comprehensive data on genes, QTLs, strains, and genomic elements for rat, human, mouse, chinchilla, dog, cat, pig, bonobo, squirrel, green monkey, and naked mole rat. The database includes extensive ontology annotations (RDO, CMO, ChEBI, EFO, GO, HP, MMO, MP, PW, RS, VT, XCO), variant information, pathway data, and disease relationships.
genomics, biological systems, organisms
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| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| disgenet.data | DisGeNET Data | www.disgenet.com | GraphProduct | ❔ | had primary source | DisGeNET data, including gene to dise... |
| rnacentral.portal | RNAcentral Portal | rnacentral.org | GraphicalInterface | http | had primary source | Web portal for searching and browsing... |
| rnacentral.api | RNAcentral REST API | api | ProgrammingInterface | http | had primary source | REST API for programmatic access to R... |
| rnacentral.ftp | RNAcentral FTP Archive | RNAcentral | Product | http | had primary source | FTP archive with current and archived... |
| rnacentral.public-db | RNAcentral Public Postgres Database | public-database | DataModelProduct | postgres | had primary source | Public PostgreSQL database for direct... |
| obo-db-ingest.rgd.tsv | rgd Nodes TSV | rgd.tsv (1.6 MB) | Product | tsv | had primary source | rgd Nodes TSV |
RGD is a multispecies genomics and phenomics database, providing comprehensive data for rat and other model organisms including genes, QTLs, strains, variants, pathways, and disease associations with extensive ontological annotations.
Created: December 03, 2025 | Last modified: December 03, 2025