is a Data Source.
snOPY (snoRNA Orthological Gene Database) provides comprehensive information about small nucleolar RNAs (snoRNAs), their gene loci, and target RNAs across multiple species. The database focuses on orthologous relationships between snoRNAs using target RNA conservation rather than snoRNA sequence similarity.
genomics, biological systems
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| snopy.portal | snOPY Portal | snorna_db.cgi | GraphicalInterface | http | Web portal for browsing and searching... |
| snopy.search | Search Interface | snorna_db.cgi | GraphicalInterface | http | Search interface for querying snoRNAs... |
| snopy.orthologs | Ortholog Browser | snorna_db.cgi?mode=orthologs | GraphicalInterface | http | Ortholog browser for exploring snoRNA... |
| snopy.target-rna | Target RNA Viewer | snorna_db.cgi?mode=target | GraphicalInterface | http | Target RNA viewer for exploring modif... |
| snopy.blast | BLAST Interface | snorna_db.cgi?mode=blast | ProgrammingInterface | http | BLAST interface for sequence similari... |
| snopy.box-cd-snornas | Box C/D snoRNAs | snorna_db.cgi | Product | http | Curated snoRNA sequences for box C/D ... |
| snopy.box-haca-snornas | Box H/ACA snoRNAs | snorna_db.cgi | Product | http | Curated snoRNA sequences for box H/AC... |
| snopy.intronic-loci | Intronic snoRNA Loci | snorna_db.cgi | Product | http | Information about intronic snoRNA gen... |
| snopy.polycistronic-loci | Polycistronic snoRNA Loci | snorna_db.cgi | Product | http | Information about polycistronic snoRN... |
| snopy.monocistronic-loci | Monocistronic snoRNA Loci | snorna_db.cgi | Product | http | Information about monocistronic snoRN... |
| snopy.rrna-modifications | rRNA Modification Sites | snorna_db.cgi?mode=target | Product | http | Mapped modification sites on rRNA tar... |
| snopy.snrna-modifications | snRNA Modification Sites | snorna_db.cgi?mode=target | Product | http | Mapped modification sites on snRNA ta... |
| snopy.ortholog-data | snoRNA Ortholog Data | snorna_db.cgi?mode=orthologs | Product | http | Orthologous snoRNA relationships iden... |
| snopy.about | About snOPY | snorna_db.cgi?mode=about | DocumentationProduct | http | About page with database description,... |
| snopy.statistics | Statistics | snorna_db.cgi?mode=statistics | DocumentationProduct | http | Database statistics showing organism ... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| rnacentral.portal | RNAcentral Portal | rnacentral.org | GraphicalInterface | http | Web portal for searching and browsing... |
| rnacentral.api | RNAcentral REST API | api | ProgrammingInterface | http | REST API for programmatic access to R... |
| rnacentral.ftp | RNAcentral FTP Archive | RNAcentral | Product | http | FTP archive with current and archived... |
| rnacentral.public-db | RNAcentral Public Postgres Database | public-database | DataModelProduct | postgres | Public PostgreSQL database for direct... |
Created: September 09, 2025 | Last modified: October 27, 2025