is a Knowledge Graph.
It is part of the OKN collection.
The spoke-okn (SPOKE Open Knowledge Network) KG is a comprehensive biomedical and environmental health knowledge graph that integrates diverse data across genomics, environmental science, and public health.
biomedical, genomics, clinical, precision medicine, pharmacology
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Github: baranzini-lab
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| spoke-okn.sparql | SPOKE-OKN SPARQL | sparql | ProgrammingInterface | http | SPARQL endpoint for SPOKE-OKN |
| spoke-okn.tpf | SPOKE-OKN TPF | spoke-okn | ProgrammingInterface | http | Triple Pattern Fragments endpoint for... |
| spoke-okn.graph | SPOKE-OKN Graph | spoke.ucsf.edu | GraphProduct | ttl | The SPOKE-OKN knowledge graph, an OKN... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| spoke-genelab.sparql | SPOKE GeneLab SPARQL | sparql | ProgrammingInterface | http | was influenced by | SPARQL endpoint for SPOKE GeneLab |
| spoke-genelab.tpf | SPOKE GeneLab TPF | spoke-genelab | ProgrammingInterface | ❔ | was influenced by | Triple Pattern Fragments endpoint for... |
SPOKE-OKN
SPOKE-OKN is the OKN-hosted publication of the SPOKE biomedical knowledge graph, exposed through FRINK query services for the OKN ecosystem. The underlying SPOKE project integrates data from many curated biomedical resources to connect genes, diseases, compounds, pathways, phenotypes, and clinical concepts for precision medicine and translational research use cases.
The current SPOKE publications describe a graph assembled from dozens of source databases and ontologies, with weekly rebuilds and use cases spanning drug discovery, disease mechanism analysis, and knowledge-guided analysis of clinical data. The OKN deployment provides web-query access to that graph through FRINK.
This resource was automatically synchronized from the FRINK OKN registry.
Created: March 30, 2026 | Last modified: July 01, 2026