is a Data Source.
SRPDB (Signal Recognition Particle Database) provides aligned, annotated, and phylogenetically ordered sequences related to the structure and function of signal recognition particles (SRP). The database contains over 1,100 SRP RNA sequences and protein sequences from various organisms, with secondary structure diagrams based on comparative sequence analysis.
genomics, biological systems
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| srpdb.portal | SRPDB Portal | SRPDB | GraphicalInterface | http | Web portal for browsing SRP RNA and p... |
| srpdb.srp-rna-browser | SRP RNA Browser | srprna.html | GraphicalInterface | http | Browser for SRP RNA sequences organiz... |
| srpdb.srp-protein-browser | SRP Protein Browser | srpprotein.html | GraphicalInterface | http | Browser for SRP protein sequences inc... |
| srpdb.more-protein-browser | More Protein Browser | moreprotein.html | GraphicalInterface | http | Browser for additional proteins inclu... |
| srpdb.structures | SRP Structures | srpstructures.html | GraphicalInterface | http | Gallery of SRP structures from experi... |
| srpdb.models | SRP Models | srpmodels.html | GraphicalInterface | http | Collection of SRP structural models |
| srpdb.short-bacterial-rna | Short Bacterial SRP RNA Alignments | srprna.html | Product | http | Multiple sequence alignments of short... |
| srpdb.long-bacterial-rna | Long Bacterial SRP RNA Alignments | srprna.html | Product | http | Multiple sequence alignments of long ... |
| srpdb.archaeal-rna | Archaeal SRP RNA Alignments | srprna.html | Product | http | Multiple sequence alignments of archa... |
| srpdb.protozoan-rna | Protozoan SRP RNA Alignments | srprna.html | Product | http | Multiple sequence alignments of proto... |
| srpdb.fungal-metazoan-rna | Fungal/Metazoan SRP RNA Alignments | srprna.html | Product | http | Multiple sequence alignments of funga... |
| srpdb.plant-rna | Plant SRP RNA Alignments | srprna.html | Product | http | Multiple sequence alignments of plant... |
| srpdb.animal-rna | Animal SRP RNA Alignments | srprna.html | Product | http | Multiple sequence alignments of anima... |
| srpdb.2d-structures | SRP RNA 2D Structures | srprna.html | Product | http | RNA secondary structure diagrams with... |
| srpdb.3d-structures | SRP 3D Structures | srprna.html | Product | http | Three-dimensional structural informat... |
| srpdb.motifs | SRP RNA Motifs | srprna.html | Product | http | Conserved sequence motifs in SRP RNAs |
| srpdb.srp9 | SRP9 Protein Sequences | srpprotein.html | Product | http | Aligned and annotated sequences for S... |
| srpdb.srp14 | SRP14 Protein Sequences | srpprotein.html | Product | http | Aligned and annotated sequences for S... |
| srpdb.srp19 | SRP19 Protein Sequences | srpprotein.html | Product | http | Aligned and annotated sequences for S... |
| srpdb.srp21 | SRP21 Protein Sequences | srpprotein.html | Product | http | Aligned and annotated sequences for S... |
| srpdb.srp54 | SRP54 Protein Sequences | srpprotein.html | Product | http | Aligned and annotated sequences for S... |
| srpdb.srp68 | SRP68 Protein Sequences | srpprotein.html | Product | http | Aligned and annotated sequences for S... |
| srpdb.srp72 | SRP72 Protein Sequences | srpprotein.html | Product | http | Aligned and annotated sequences for S... |
| srpdb.cpsrp43 | cpSRP43 Protein Sequences | srpprotein.html | Product | http | Aligned and annotated sequences for c... |
| srpdb.ftsy | SRP Receptor Alpha (FtsY) Sequences | moreprotein.html | Product | http | Aligned and annotated sequences for S... |
| srpdb.receptor-beta | SRP Receptor Beta Sequences | moreprotein.html | Product | http | Aligned and annotated sequences for S... |
| srpdb.flhf | Flhf Protein Sequences | moreprotein.html | Product | http | Aligned and annotated sequences for F... |
| srpdb.cam-kinase | CaM Kinase II Sequences | moreprotein.html | Product | http | Aligned and annotated sequences for C... |
| srpdb.overview | SRP Overview | StrucFunctSRP.html | DocumentationProduct | http | Overview of signal recognition partic... |
| srpdb.about | About SRPDB | AboutSRPDB.html | DocumentationProduct | http | Comprehensive information about SRPDB... |
| srpdb.bibliography | Bibliography | BiblioSRPDB.html | DocumentationProduct | http | Bibliography of SRP-related publications |
| srpdb.comparative-analysis | Comparative Sequence Analysis Documentation | CompaSeqAnal.html | DocumentationProduct | http | Explanation of comparative sequence a... |
| srpdb.links | Useful Links | SRP-Links.html | DocumentationProduct | http | External links to SRP-related resources |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| rnacentral.portal | RNAcentral Portal | rnacentral.org | GraphicalInterface | http | Web portal for searching and browsing... |
| rnacentral.api | RNAcentral REST API | api | ProgrammingInterface | http | REST API for programmatic access to R... |
| rnacentral.ftp | RNAcentral FTP Archive | RNAcentral | Product | http | FTP archive with current and archived... |
| rnacentral.public-db | RNAcentral Public Postgres Database | public-database | DataModelProduct | postgres | Public PostgreSQL database for direct... |
Created: September 09, 2025 | Last modified: October 27, 2025