treefam

is a Data Source.

TreeFam (Tree families database) is a database of phylogenetic trees of animal gene families. It provides curated and automatically generated gene trees, inferred orthologs and paralogs, and gene family annotations across a wide range of animal species.

Domains

genomics, organisms

License

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Homepage

treefam

Repository

Unknown

Infores ID

Unknown

FAIRsharing ID

Unknown

Product Summary

Products

From this Resource
ID Name URL Category Format Description
treefam.site TreeFam Website www.treefam.org GraphicalInterface http Web interface for browsing and search...
treefam.downloads TreeFam Downloads download Product mixed Bulk downloads of gene trees, alignme...
From other Resources
ID Name URL Category Format Relation Description
genecards.web.interface GeneCards Web Interface www.genecards.org GraphicalInterface http had primary source Web-based interface for searching and...

Details

TreeFam

TreeFam (Tree families database) is a resource of phylogenetic trees for animal gene families. It combines automated pipelines with manual curation to provide reliable gene trees, from which orthology and paralogy relationships, gene family memberships, and functional annotations are derived.

Content includes:

  • Curated and automatically generated gene trees for animal gene families
  • Inferred orthologs and paralogs across species
  • Multiple sequence alignments and HMMs for gene families
  • Bulk downloads of trees, alignments, and annotations

GeneCards integrates gene family and phylogenetic information from TreeFam.

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Created: June 17, 2026 | Last modified: June 17, 2026