is a Data Source.
The UCSC Genome Browser is a web-based tool and data resource providing access to reference genome assemblies and an extensive collection of aligned annotation tracks for human and many other organisms. It supports interactive visualization, bulk data download, and programmatic access to genomic annotations.
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| ucsc.browser | UCSC Genome Browser | genome.ucsc.edu | Graphical Interface | http | Interactive web browser for viewing r... |
| ucsc.tablebrowser | UCSC Table Browser | hgTables | Graphical Interface | http | Tool for extracting and downloading s... |
| ucsc.downloads | UCSC Genome Browser Downloads | downloads.html | Product | mixed | Bulk downloads of genome assemblies a... |
| ucsc.api | UCSC Genome Browser REST API | api.genome.ucsc.edu | Programming Interface | http | REST API for programmatic access to g... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| genecards.web.interface | GeneCards Web Interface | www.genecards.org | Graphical Interface | http | had primary source | Web-based interface for searching and... |
| togows.ucsc-api | TogoWS UCSC API | help | Programming Interface | http | had primary source | REST API over the public UCSC Genome ... |
| mygene.api | MyGene.info API | api | Programming Interface | http | had primary source | MyGene.info REST API (v3) for gene qu... |
| dbnsfp.academic | dbNSFP Academic Branch | download | Product | tsv | had primary source | Academic branch of dbNSFP (v5.4a at t... |
| dbnsfp.commercial | dbNSFP Commercial Branch | license | Product | tsv | had primary source | Commercial branch of dbNSFP (v5.4c at... |
| cadd.snvs.grch38 | CADD v1.7 Whole-Genome SNV Scores (GRCh38) | whole_genome_SNVs.tsv.gz (81.5 GB) | Product | tsv | was influenced by | CADD v1.7 precomputed raw and PHRED-s... |
| cadd.snvs.grch37 | CADD v1.7 Whole-Genome SNV Scores (GRCh37) | whole_genome_SNVs.tsv.gz (79.4 GB) | Product | tsv | was influenced by | CADD v1.7 precomputed raw and PHRED-s... |
The UCSC Genome Browser, developed and maintained at the University of California, Santa Cruz, is one of the most widely used resources for the visualization and analysis of genomic data. It provides reference genome assemblies for human and a large number of other species, together with thousands of annotation tracks contributed by UCSC and the wider community.
Key components include:
GeneCards integrates genomic annotation and mapping information from the UCSC Genome Browser.
Created: June 17, 2026 | Last modified: September 23, 2026