is a Data Source.
It is part of the Ber collection.
WikiPathways is an open, collaborative platform dedicated to the curation of biological pathways contributed, updated, and used by the research community.
pathways, genomics, biomedical
Unknown
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| wikipathways.gpml | WikiPathways GPML | gpml | Product | xml | Pathways in Graphical Pathway Markup ... |
| wikipathways.gmt | WikiPathways GMT | gmt | Product | tsv | Pathways in Gene Matrix Transposed (G... |
| wikipathways.rdf | WikiPathways RDF | rdf | Product | ttl | Pathways in RDF (Resource Description... |
| wikipathways.sparql | WikiPathways SPARQL Endpoint | sparql.wikipathways.org | ProgrammingInterface | ❔ | SPARQL endpoint for querying WikiPath... |
| wikipathways.api | WikiPathways API | ui | ProgrammingInterface | ❔ | Web service API for programmatic acce... |
| wikipathways.web | WikiPathways Web Interface | www.wikipathways.org | GraphicalInterface | ❔ | The main web interface for browsing, ... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| spoke.graph | SPOKE Graph | ❔ | GraphProduct | ❔ | The SPOKE knowledge graph containing ... |
| ubkg.neo4j | UBKG Neo4j Docker Distribution | ubkg-downloads.xconsortia.org | GraphProduct | ❔ | Turnkey neo4j distributions that depl... |
| ubkg.csv | UBKG Ontology CSV Files | ubkg-downloads.xconsortia.org | GraphProduct | csv | Ontology CSV files that can be import... |
| alzkb.browser | AlzKB Graph Database Browser | login | GraphicalInterface | http | A browser interface for a knowledge g... |
| alzkb.data | AlzKB Data Release (Version 2.0.0) | v2.0.0 | GraphProduct | ❔ | Memgraph data release for AlzKB. |
| indra.cogex.code | INDRA CoGEx Build Code | indra_cogex | ProcessProduct | ❔ | INDRA CoGEx is a graph database integ... |
| rna-kg.kg.neo4j | RNA-KG Neo4j Dump | rnakgv20.dump (3.7 GB) | GraphProduct | neo4j | RNA-KG as a Neo4j Dump |
| rna-kg.kg.nodes | RNA-KG Nodes | nodes.csv (4.1 GB) | GraphProduct | csv | RNA-KG Nodes in CSV format |
| rna-kg.kg.edges | RNA-KG Edges | edges.csv (17.1 GB) | GraphProduct | csv | RNA-KG Edges in CSV format |