is a Data Source.
WormBase is an online biological database providing comprehensive genomic and biological information about C. elegans and related nematodes, including annotated genomes, gene structures, functional annotations, genetic maps, gene expression data, protein interactions, RNAi phenotypes, and curated literature.
genomics, organisms, anatomy and development
infores:wormbase
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| wormbase.portal | WormBase Web Portal | www.wormbase.org | GraphicalInterface | http | Primary web portal for browsing and s... |
| wormbase.gbrowse | WormBase GBrowse | c_elegans | GraphicalInterface | ❔ | Genome browser for visualizing genes,... |
| wormbase.api | WormBase REST API | API-REST | ProgrammingInterface | ❔ | REST API providing programmatic acces... |
| wormbase.wormmine | WormMine | begin.do | GraphicalInterface | ❔ | WormMine InterMine instance for compl... |
| wormbase.textpresso | Textpresso | tfw.cgi | GraphicalInterface | ❔ | Full-text search tool for querying C.... |
| wormbase.ftp ⚠ | WormBase FTP Downloads | wormbase | Product | ❔ | FTP server providing bulk downloads o... |
| wormbase.parasite | WormBase ParaSite | parasite.wormbase.org | GraphicalInterface | ❔ | Sub-portal hosting approximately 100 ... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| string.protein.links | STRING Protein Links | protein.links.v12.0.txt.gz (128.7 GB) | GraphProduct | txt | protein network data (full network, s... |
| string.protein.links.detailed | STRING Protein Links Detailed | protein.links.detailed.v12.0.txt.gz (189.6 GB) | GraphProduct | txt | protein network data (full network, i... |
| string.protein.links.full | STRING Protein Links Full | protein.links.full.v12.0.txt.gz (199.6 GB) | GraphProduct | txt | protein network data (full network, i... |
| string.protein.physical.links | STRING Protein Physical Links | protein.physical.links.v12.0.txt.gz (11.1 GB) | GraphProduct | txt | protein network data (physical subnet... |
| string.protein.physical.links.detailed | STRING Protein Physical Links Detailed | protein.physical.links.detailed.v12.0.txt.gz (13.8 GB) | GraphProduct | txt | protein network data (physical subnet... |
| string.protein.physical.links.full | STRING Protein Physical Links Full | protein.physical.links.full.v12.0.txt.gz (14.5 GB) | GraphProduct | txt | protein network data (physical subnet... |
| string.cog.links | STRING COG Links | COG.links.v12.0.txt.gz (176.8 MB) | GraphProduct | txt | association scores between orthologou... |
| string.cog.links.detailed | STRING COG Links Detailed | COG.links.detailed.v12.0.txt.gz (238.7 MB) | GraphProduct | txt | association scores (incl. subscores p... |
| string.database | STRING Database Network Schema | network_schema.v12.0.sql.gz (262.2 GB) | GraphProduct | ❔ | full database, part II: the networks ... |
Created: October 30, 2025 | Last modified: October 30, 2025