is a Data Source.
The Zasha Weinberg Data repository is a collection of RNA sequence and structure data, including information about regulatory RNA elements, riboswitches, and non-coding RNAs. This data source contributes to the RNAcentral aggregator and focuses on structured RNA data from computational and comparative genomics analyses.
genomics, biological systems
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| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| zwd.alignments | Zasha Weinberg Data Repository Sequence Alignments | master | Product | http | Multiple sequence alignments for RNA ... |
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| rnacentral.portal | RNAcentral Portal | rnacentral.org | GraphicalInterface | http | Web portal for searching and browsing... |
| rnacentral.api | RNAcentral REST API | api | ProgrammingInterface | http | REST API for programmatic access to R... |
| rnacentral.ftp | RNAcentral FTP Archive | RNAcentral | Product | http | FTP archive with current and archived... |
| rnacentral.public-db | RNAcentral Public Postgres Database | public-database | DataModelProduct | postgres | Public PostgreSQL database for direct... |
The Zasha Weinberg Data (ZWD) repository is a collection of RNA sequence and structure data maintained by Zasha Weinberg. This data source provides curated information about RNA elements, particularly focusing on regulatory RNAs, riboswitches, and other structured non-coding RNA elements. The data is hosted on Bitbucket and contributes to the comprehensive RNAcentral non-coding RNA sequence database.
The repository contains RNA-related data derived from computational and comparative genomics analyses. As a contributor to RNAcentral, ZWD provides specialized RNA sequence and annotation data that complements other expert databases in the RNAcentral consortium. The focus is on structured RNA elements identified through computational methods and comparative sequence analysis.
The data is organized in the Bitbucket repository at https://bitbucket.org/zashaw/zashaweinbergdata/ and is structured to support computational analysis of RNA sequences and structures. The repository serves as both a standalone resource and a data source for the broader RNAcentral aggregator.
ZWD data is integrated into RNAcentral, the international non-coding RNA sequence database. Through this integration, ZWD sequences and annotations become searchable and accessible via RNAcentral’s web portal, REST API, FTP archive, and public PostgreSQL database. This ensures broad accessibility and interoperability with other RNA databases.
The primary access point for ZWD data is through the Bitbucket repository. Additionally, ZWD contributions can be accessed through RNAcentral’s various interfaces, providing multiple pathways for researchers to utilize this data in their work.
The data is particularly relevant for researchers studying:
When using data from this repository, please cite the Bitbucket repository and acknowledge the contribution to RNAcentral where applicable.
Created: October 29, 2025 | Last modified: October 29, 2025