is a Ontology.
It is part of the OBO Foundry collection.
The Cell Ontology is a structured controlled vocabulary for cell types in animals.
infores:cl
Unknown
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| cl.owl | Main CL OWL edition | cl.owl (62.8 MB) | Ontology | owl | Complete ontology, plus inter-ontolog... |
| cl.obo | CL obo format edition | cl.obo (16.5 MB) | Ontology | obo | Complete ontology, plus inter-ontolog... |
| cl.json | CL OBOGraph-JSON format edition | cl.json (38.0 MB) | Ontology | json | Complete ontology, plus inter-ontolog... |
| cl.cl-basic.owl | Basic CL | cl-basic.owl (9.1 MB) | Ontology | owl | Basic version, no inter-ontology axioms |
| cl.cl-basic.obo | Basic CL (OBO version) | cl-basic.obo (3.2 MB) | Ontology | obo | Basic version, no inter-ontology axioms |
| cl.cl-basic.json | Basic CL (OBOGraph-JSON version) | cl-basic.json (5.8 MB) | Ontology | json | Basic version, no inter-ontology axioms |
| cl.cl-base.owl | CL base module | cl-base.owl (12.0 MB) | Ontology | owl | complete CL but with no imports or ex... |
| cl.cl-base.obo | CL base module (OBO version) | cl-base.obo (3.6 MB) | Ontology | obo | complete CL but with no imports or ex... |
| cl.cl-base.json | CL base module (OBOGraph-JSON version) | cl-base.json (7.4 MB) | Ontology | json | complete CL but with no imports or ex... |
| cl.kg-bioportal | CL KGX graph (KG-Bioportal) | CL.tar.gz (2.3 MB) | Graph | kgx | KGX TSV transform of Cell Ontology (C... |
| ID | Name | URL | Category | Format | Relation | Description |
|---|---|---|---|---|---|---|
| ubkg.neo4j | UBKG Neo4j Docker Distribution | ubkg-downloads.xconsortia.org | Graph | neo4j | had primary source | Turnkey neo4j distributions that depl... |
| ubkg.csv | UBKG Ontology CSV Files | ubkg-downloads.xconsortia.org | Graph | csv | had primary source | Ontology CSV files that can be import... |
| spoke.graph | SPOKE Graph | data-tools | Graph | http | had primary source | The SPOKE knowledge graph containing ... |
| ibkh.graph | iBKH Knowledge Graph | ❔ | Graph | mixed | had primary source | The integrative Biomedical Knowledge ... |
| mechreponet.kg | MechRepoNet Knowledge Graph | publication | Product | mixed | had primary source | The MechRepoNet knowledge graph in it... |
| pheknowlator.graph | PheKnowLator graph | knowledge_graphs?pageState=(%22StorageObjectListTable%22:(%22f%22:%22%255B%255D%22))&inv=1&invt=Ab5_1Q&project=pheknowlator | Graph | owl | had primary source | PheKnowLator graph files, including s... |
| rna-kg.kg.neo4j | RNA-KG Neo4j Dump | rnakgv20.dump (3.7 GB) | Graph | neo4j | had primary source | RNA-KG as a Neo4j Dump |
| rna-kg.kg.nodes | RNA-KG Nodes | nodes.csv (4.1 GB) | Graph | csv | had primary source | RNA-KG Nodes in CSV format |
| rna-kg.kg.edges | RNA-KG Edges | edges.csv (17.1 GB) | Graph | csv | had primary source | RNA-KG Edges in CSV format |
| efo.owl | EFO OWL | efo.owl (229.5 MB) | Ontology | owl | had primary source | The latest release of EFO in OWL format |
| efo.obo | EFO OBO | efo.obo (61.1 MB) | Ontology | obo | had primary source | The latest release of EFO in OBO format |
| drugmechdb.graph | DrugMechDB Graph Dataset | zenodo.8139357 | Graph | mixed | had primary source | Curated mechanistic drug–disease path... |
| cl-kg.api.neo4j | CL-KG Neo4j graph instance | browser | Programming Interface | neo4j | had primary source | Publicly available Neo4j instance for... |
| pharmebinet.json | PharMeBINet JSON Release | content (1.8 GB) | Graph | json | was derived from | PharMeBINet V2 JSON release published... |
| pharmebinet.tsv | PharMeBINet TSV Release | content (1.8 GB) | Graph | tsv | was derived from | PharMeBINet V2 TSV release published ... |
| pharmebinet.graphml | PharMeBINet GraphML Release | content (1.9 GB) | Graph | mixed | was derived from | PharMeBINet V2 GraphML release publis... |
| pharmebinet.neo4j | PharMeBINet Neo4j Database | content (3.6 GB) | Graph | neo4j | was derived from | PharMeBINet V2 Neo4j database release... |
| pharmebinet.neo4j.dump | PharMeBINet Neo4j Dump | content (3.4 GB) | Graph | neo4j | was derived from | PharMeBINet V2 Neo4j dump release pub... |
| hra.data | HRA Data Downloads | overview-data | Product | mixed | used | Downloadable data files including ana... |
| hra.knowledge-graph | Human Reference Atlas Knowledge Graph | kg | Graph | http | used | HRA Knowledge Graph documentation and... |
| biobtree.api | BioBTree REST API | api | Programming Interface | http | had primary source | REST API for searching identifiers an... |
| biobtree.graph.human-subgraph | BioBTree Knowledge Graph - Human Subgraph (KGX) | 20816742 | Graph | kgx | had primary source | Human-scoped, Neo4j-ready subgraph of... |
| genomickb.graph | GenomicKB Graph Dump | genomickb-a-knowledgebase-for-the-human-genome | Graph | http | had primary source | GenomicKB 1.0 Neo4j Database Dump (Re... |
| hra-kg.graph.ttl | HRA KG graph data, v2.2, Turtle format | graph.ttl (194.6 MB) | Graph | ttl | had primary source | The graph representation of the Human... |
| hra-kg.graph.json | HRA KG graph data, v2.2, JSON-LD format | graph.json (17.6 KB) | Graph | jsonld | had primary source | The graph representation of the Human... |
| hra-kg.graph.xml | HRA KG graph data, v2.2, RDF/XML format | graph.xml (176.5 MB) | Graph | rdfxml | had primary source | The graph representation of the Human... |
| hra-kg.graph.nt | HRA KG graph data, v2.2, N-Triples format | graph.nt (277.9 MB) | Graph | ntriples | had primary source | The graph representation of the Human... |
| hra-kg.graph.nq | HRA KG graph data, v2.2, N-Quads format | graph.nq (359.5 MB) | Graph | nquads | had primary source | The graph representation of the Human... |
| np-kg.graph.tsv | NP-KG TSV | NP-KG_v3.0.0.tsv?download=1 (1.0 GB) | Graph | tsv | had primary source | Merged KG with ontology-grounded KG a... |
| np-kg.graph.networkx | NP-KG gpickle | NP-KG_v3.0.0.gpickle?download=1 (892.7 MB) | Graph | mixed | had primary source | Merged KG with ontology-grounded KG a... |
| sri-reference-kg.graph | SRI-Reference KG (KGX distribution) | monarch-kg.tar.gz (219.4 MB) | Graph | kgx | had primary source | KGX distribution of the SRI-Reference KG |
| nlm-ckn.graph | nlm-ckn-graph | nlm-ckn.org | Graph | http | was influenced by | The NLM-CKN knowledge graph of cellul... |
| spoke-okn.graph | SPOKE-OKN Graph | spoke.ucsf.edu | Graph | ttl | was influenced by | The SPOKE-OKN knowledge graph, an OKN... |
| ctd.anatomy | CTD Anatomy Vocabulary | CTD_anatomy.tsv.gz (317.3 KB) | Product | tsv | was derived from | CTD's anatomy vocabulary, a modified ... |
The Cell Ontology is a structured controlled vocabulary for cell types in animals.
Complete ontology, plus inter-ontology axioms, and imports modules
URL: http://purl.obolibrary.org/obo/cl.owl
Format: owl
Complete ontology, plus inter-ontology axioms, and imports modules merged in
URL: http://purl.obolibrary.org/obo/cl.obo
Format: obo
Complete ontology, plus inter-ontology axioms, and imports modules merged in
URL: http://purl.obolibrary.org/obo/cl.json
Format: json
Basic version, no inter-ontology axioms
URL: http://purl.obolibrary.org/obo/cl/cl-basic.owl
Format: owl
Basic version, no inter-ontology axioms
URL: http://purl.obolibrary.org/obo/cl/cl-basic.obo
Format: obo
Basic version, no inter-ontology axioms
URL: http://purl.obolibrary.org/obo/cl/cl-basic.json
Format: json
complete CL but with no imports or external axioms
URL: http://purl.obolibrary.org/obo/cl/cl-base.owl
Format: owl
complete CL but with no imports or external axioms
URL: http://purl.obolibrary.org/obo/cl/cl-base.obo
Format: obo
complete CL but with no imports or external axioms
URL: http://purl.obolibrary.org/obo/cl/cl-base.json
Format: json
Domains: anatomy and development
Taxon: NCBITaxon:33208
This resource was automatically synchronized from the OBO Foundry registry.
Created: June 04, 2025 | Last modified: September 23, 2026