clinicalkg

is a Knowledge Graph.

The Clinical Knowledge Graph (CKG) is an open-source platform that integrates proteomics and clinical data with knowledge from diverse biomedical databases and literature to support precision medicine. The CKG has reported scale of ~16 million nodes and ~220 million relationships and provides tooling for analysis, reporting, and knowledge discovery.

License

MIT License

Homepage

clinicalkg

Repository

GitHub

Infores ID

Unknown

FAIRsharing ID

Unknown

Product Summary

Products

From this Resource
ID Name URL Category Format Description
clinicalkg.docs CKG Documentation ckg.readthedocs.io DocumentationProduct http Project documentation for installatio...
clinicalkg.graph CKG Graph Dump 1 GraphProduct mixed Neo4j database dump of the Clinical K...

Details

Clinical Knowledge Graph

Overview

CKG is both a biomedical knowledge graph and an analysis platform for integrating proteomics experiments with curated biomedical databases and literature-derived knowledge.

The public project documentation covers graph construction, database querying, project reports, notebooks, and API-level extension points, complementing the downloadable Neo4j dump already listed on this page.

Evaluation

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Created: August 12, 2025 | Last modified: May 30, 2026