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Peter Robinson
Github: pnrobinson
| ID | Name | URL | Category | Format | Description |
|---|---|---|---|---|---|
| sldb.code | SLDB Source Repository | SLDBGen | ProcessProduct | http | Source code for building the syntheti... |
| sldb.docs | SLDB Documentation | SLDBGen#readme | DocumentationProduct | http | Project README and documentation for ... |
| sldb.data | SLDB Interaction Table | SL_data.tsv (35.5 KB) | Product | tsv | Tab-separated export of curated synth... |
| sldb.releases | SLDB Releases | releases | Product | mixed | Release artifacts for SLDB graph builds. |
SLDB is a synthetic lethality knowledge graph and build workflow developed in the Monarch Initiative ecosystem. The project curates synthetic lethal relationships from published cancer studies, normalizes gene identifiers, captures assay and perturbation context, and emits a structured interaction table that can be reused for downstream graph construction.
The upstream SLDBGen repository includes the extraction scripts, test data, and a tabular export of curated interactions. Records in the published table include the paired genes, identifier mappings, perturbation types, assay information, cell line context, and PMID-backed provenance from the source literature.
Created: March 09, 2025 | Last modified: July 01, 2026